HEADER TOXIN 10-FEB-22 7R5A TITLE VIBRIO CHOLERA PARD2:PARE2 ANTITOXIN:TOXIN COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOXIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ANTITOXIN PARD; COMPND 7 CHAIN: B, C, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE O1 BIOVAR EL TOR STR. N16961; SOURCE 3 ORGANISM_TAXID: 243277; SOURCE 4 GENE: VC_A0359; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE O1 BIOVAR EL TOR STR. N16961; SOURCE 9 ORGANISM_TAXID: 243277; SOURCE 10 GENE: PARD, VC_A0360.1; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 12 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PROKARYOTIC TOXIN:ANTITOXIN SYSTEM, INTRINSICALLY DISORDERED KEYWDS 2 PROTEINS, RHH PROTEIN, DNA BINDING PROTEIN, TRANSCRIPTIONAL KEYWDS 3 REPRESSOR, ANTITOXIN, TOXIN, GYRASE-POISON, VIBRIO CHOLERAE EXPDTA X-RAY DIFFRACTION AUTHOR G.GARCIA-RODRIGUEZ,R.LORIS REVDAT 3 31-JAN-24 7R5A 1 JRNL REVDAT 2 24-JAN-24 7R5A 1 JRNL REVDAT 1 27-APR-22 7R5A 0 JRNL AUTH G.GARCIA-RODRIGUEZ,Y.GIRARDIN,R.KUMAR SINGH,A.N.VOLKOV, JRNL AUTH 2 J.VAN DYCK,G.MURUGANANDAM,F.SOBOTT,D.CHARLIER,R.LORIS JRNL TITL TOXIN:ANTITOXIN RATIO SENSING AUTOREGULATION OF THE VIBRIO JRNL TITL 2 CHOLERAE PARDE2 MODULE. JRNL REF SCI ADV V. 10 J2403 2024 JRNL REFN ESSN 2375-2548 JRNL PMID 38181072 JRNL DOI 10.1126/SCIADV.ADJ2403 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH G.GARCIA-RODRIGUEZ,Y.GIRARDIN,A.N.VOLKOV,R.K.SINGH, REMARK 1 AUTH 2 G.MURUGANANDAM,J.VAN DYCK,F.SOBOTT,W.VERSEES,D.CHARLIER, REMARK 1 AUTH 3 R.LORIS REMARK 1 TITL ENTROPIC PRESSURE CONTROLS THE OLIGOMERIZATION OF THE VIBRIO REMARK 1 TITL 2 CHOLERAE PARD2 ANTITOXIN. REMARK 1 REF ACTA CRYSTALLOGR D STRUCT V. 77 904 2021 REMARK 1 REF 2 BIOL REMARK 1 REFN ISSN 2059-7983 REMARK 1 DOI 10.1107/S2059798321004873 REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 11243 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.268 REMARK 3 R VALUE (WORKING SET) : 0.263 REMARK 3 FREE R VALUE : 0.308 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.830 REMARK 3 FREE R VALUE TEST SET COUNT : 1105 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.5100 - 5.9000 1.00 1252 149 0.2186 0.2504 REMARK 3 2 5.8900 - 4.6800 1.00 1304 109 0.2393 0.2944 REMARK 3 3 4.6800 - 4.0900 1.00 1235 162 0.2466 0.2993 REMARK 3 4 4.0900 - 3.7200 1.00 1312 111 0.2712 0.3888 REMARK 3 5 3.7200 - 3.4500 1.00 1224 173 0.3010 0.3720 REMARK 3 6 3.4500 - 3.2500 1.00 1303 117 0.3482 0.3737 REMARK 3 7 3.2500 - 3.0800 1.00 1227 170 0.3644 0.3455 REMARK 3 8 3.0800 - 2.9500 0.99 1281 114 0.3757 0.3773 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.460 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 98.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' REMARK 3 ORIGIN FOR THE GROUP (A): 13.4849 7.8457 10.0404 REMARK 3 T TENSOR REMARK 3 T11: 0.3444 T22: 0.6561 REMARK 3 T33: 0.4299 T12: 0.0138 REMARK 3 T13: -0.1602 T23: 0.0232 REMARK 3 L TENSOR REMARK 3 L11: 5.6202 L22: 6.2625 REMARK 3 L33: 8.4390 L12: -2.4823 REMARK 3 L13: -3.3540 L23: 1.0038 REMARK 3 S TENSOR REMARK 3 S11: -0.3490 S12: -0.4829 S13: 0.0868 REMARK 3 S21: 0.1613 S22: 0.2176 S23: 0.0139 REMARK 3 S31: -0.8029 S32: 0.3327 S33: 0.1295 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' REMARK 3 ORIGIN FOR THE GROUP (A): -2.8707 -1.4118 12.5451 REMARK 3 T TENSOR REMARK 3 T11: 0.5371 T22: 0.5615 REMARK 3 T33: 0.4690 T12: 0.1706 REMARK 3 T13: -0.0632 T23: 0.0066 REMARK 3 L TENSOR REMARK 3 L11: 7.0389 L22: 1.5818 REMARK 3 L33: 2.0399 L12: 0.0526 REMARK 3 L13: 0.2527 L23: -0.4237 REMARK 3 S TENSOR REMARK 3 S11: -0.2722 S12: -0.7858 S13: -0.7669 REMARK 3 S21: 0.0961 S22: 0.0131 S23: -0.0920 REMARK 3 S31: -0.0625 S32: -0.1206 S33: 0.2592 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'C' REMARK 3 ORIGIN FOR THE GROUP (A): -16.1627 -1.0543 17.1360 REMARK 3 T TENSOR REMARK 3 T11: 0.9942 T22: 0.9494 REMARK 3 T33: 0.7562 T12: 0.2824 REMARK 3 T13: -0.0473 T23: -0.0575 REMARK 3 L TENSOR REMARK 3 L11: 5.8092 L22: 2.8480 REMARK 3 L33: 2.6182 L12: 0.5280 REMARK 3 L13: 0.9281 L23: -2.1115 REMARK 3 S TENSOR REMARK 3 S11: -0.0375 S12: -0.5431 S13: 0.4610 REMARK 3 S21: -0.3156 S22: 0.1917 S23: -0.2836 REMARK 3 S31: 1.6678 S32: 0.7432 S33: 0.1712 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'D' REMARK 3 ORIGIN FOR THE GROUP (A): -15.0681 -14.2197 0.8619 REMARK 3 T TENSOR REMARK 3 T11: 0.4471 T22: 0.5171 REMARK 3 T33: 0.8616 T12: -0.0026 REMARK 3 T13: 0.0222 T23: 0.0090 REMARK 3 L TENSOR REMARK 3 L11: 3.3609 L22: 7.6793 REMARK 3 L33: 8.6345 L12: -1.7737 REMARK 3 L13: 0.8697 L23: -5.5068 REMARK 3 S TENSOR REMARK 3 S11: -0.3493 S12: -0.4611 S13: -0.5233 REMARK 3 S21: 0.4320 S22: 0.2379 S23: 0.2450 REMARK 3 S31: -0.3119 S32: 0.5373 S33: 0.1823 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7R5A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1292120213. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-FEB-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978565 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 78228 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.950 REMARK 200 RESOLUTION RANGE LOW (A) : 46.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 12.30 REMARK 200 R MERGE (I) : 0.16280 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.6200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.06 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3KXE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 29.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M POTASSIUM CHLORIDE, 0.1 M SODIUM REMARK 280 HEPES, PH 7, 15 % PEG 5000 MME, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.72000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 32.89000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 32.89000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 95.58000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 32.89000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 32.89000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 31.86000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 32.89000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 32.89000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 95.58000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 32.89000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.89000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 31.86000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 63.72000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25420 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -97.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ILE A 96 REMARK 465 PHE A 97 REMARK 465 GLY A 98 REMARK 465 ALA A 99 REMARK 465 HIS A 100 REMARK 465 HIS A 101 REMARK 465 HIS A 102 REMARK 465 HIS A 103 REMARK 465 HIS A 104 REMARK 465 HIS A 105 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 LYS B 3 REMARK 465 ASN B 4 REMARK 465 THR B 5 REMARK 465 ILE B 79 REMARK 465 ARG B 80 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 LYS C 3 REMARK 465 ASN C 4 REMARK 465 THR C 5 REMARK 465 GLN C 52 REMARK 465 LEU C 53 REMARK 465 LEU C 54 REMARK 465 ILE C 55 REMARK 465 GLU C 56 REMARK 465 GLY C 57 REMARK 465 GLU C 58 REMARK 465 GLN C 59 REMARK 465 SER C 60 REMARK 465 GLY C 61 REMARK 465 ASP C 62 REMARK 465 ALA C 63 REMARK 465 ASP C 64 REMARK 465 TYR C 65 REMARK 465 ASP C 66 REMARK 465 LEU C 67 REMARK 465 ASP C 68 REMARK 465 SER C 69 REMARK 465 PHE C 70 REMARK 465 ILE C 71 REMARK 465 ASN C 72 REMARK 465 GLU C 73 REMARK 465 LEU C 74 REMARK 465 ASP C 75 REMARK 465 SER C 76 REMARK 465 GLU C 77 REMARK 465 ASN C 78 REMARK 465 ILE C 79 REMARK 465 ARG C 80 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 LYS D 3 REMARK 465 ASN D 4 REMARK 465 LEU D 54 REMARK 465 ILE D 55 REMARK 465 GLU D 56 REMARK 465 GLY D 57 REMARK 465 GLU D 58 REMARK 465 GLN D 59 REMARK 465 SER D 60 REMARK 465 GLY D 61 REMARK 465 ASP D 62 REMARK 465 ALA D 63 REMARK 465 ASP D 64 REMARK 465 TYR D 65 REMARK 465 ASP D 66 REMARK 465 LEU D 67 REMARK 465 ASP D 68 REMARK 465 SER D 69 REMARK 465 PHE D 70 REMARK 465 ILE D 71 REMARK 465 ASN D 72 REMARK 465 GLU D 73 REMARK 465 LEU D 74 REMARK 465 ASP D 75 REMARK 465 SER D 76 REMARK 465 GLU D 77 REMARK 465 ASN D 78 REMARK 465 ILE D 79 REMARK 465 ARG D 80 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 2 CG CD CE NZ REMARK 470 ARG A 23 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 49 CG OD1 OD2 REMARK 470 ARG A 58 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 94 CG OD1 ND2 REMARK 470 LEU B 37 CG CD1 CD2 REMARK 470 GLN B 52 CG CD OE1 NE2 REMARK 470 ILE D 7 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 25 -62.36 -105.04 REMARK 500 ASN A 47 75.05 -150.43 REMARK 500 CYS A 54 57.88 -143.15 REMARK 500 GLN A 66 81.45 -153.58 REMARK 500 HIS A 88 -157.67 -96.58 REMARK 500 LEU C 50 53.14 -110.97 REMARK 500 REMARK 500 REMARK: NULL DBREF 7R5A A 1 99 UNP Q9KMJ0 Q9KMJ0_VIBCH 1 99 DBREF 7R5A B 1 80 UNP P58093 PARD_VIBCH 1 80 DBREF 7R5A C 1 80 UNP P58093 PARD_VIBCH 1 80 DBREF 7R5A D 1 80 UNP P58093 PARD_VIBCH 1 80 SEQADV 7R5A HIS A 100 UNP Q9KMJ0 EXPRESSION TAG SEQADV 7R5A HIS A 101 UNP Q9KMJ0 EXPRESSION TAG SEQADV 7R5A HIS A 102 UNP Q9KMJ0 EXPRESSION TAG SEQADV 7R5A HIS A 103 UNP Q9KMJ0 EXPRESSION TAG SEQADV 7R5A HIS A 104 UNP Q9KMJ0 EXPRESSION TAG SEQADV 7R5A HIS A 105 UNP Q9KMJ0 EXPRESSION TAG SEQRES 1 A 105 MET LYS PRO PHE ASN LEU THR VAL ALA ALA LYS ALA ASP SEQRES 2 A 105 LEU ARG ASP ILE ALA LEU PHE THR GLN ARG ARG TRP GLY SEQRES 3 A 105 LYS GLU GLN ARG ASN VAL TYR LEU LYS GLN PHE ASP ASP SEQRES 4 A 105 SER PHE TRP LEU LEU ALA GLU ASN PRO ASP ILE GLY LYS SEQRES 5 A 105 SER CYS ASP GLU ILE ARG GLU GLY TYR ARG LYS PHE PRO SEQRES 6 A 105 GLN GLY SER HIS VAL ILE PHE TYR GLN GLN THR GLY SER SEQRES 7 A 105 GLN GLN ILE ARG VAL ILE ARG ILE LEU HIS LYS SER MET SEQRES 8 A 105 ASP VAL ASN PRO ILE PHE GLY ALA HIS HIS HIS HIS HIS SEQRES 9 A 105 HIS SEQRES 1 B 80 MET ALA LYS ASN THR SER ILE THR LEU GLY GLU HIS PHE SEQRES 2 B 80 ASP GLY PHE ILE THR SER GLN ILE GLN SER GLY ARG TYR SEQRES 3 B 80 GLY SER ALA SER GLU VAL ILE ARG SER ALA LEU ARG LEU SEQRES 4 B 80 LEU GLU ASN GLN GLU THR LYS LEU GLN SER LEU ARG GLN SEQRES 5 B 80 LEU LEU ILE GLU GLY GLU GLN SER GLY ASP ALA ASP TYR SEQRES 6 B 80 ASP LEU ASP SER PHE ILE ASN GLU LEU ASP SER GLU ASN SEQRES 7 B 80 ILE ARG SEQRES 1 C 80 MET ALA LYS ASN THR SER ILE THR LEU GLY GLU HIS PHE SEQRES 2 C 80 ASP GLY PHE ILE THR SER GLN ILE GLN SER GLY ARG TYR SEQRES 3 C 80 GLY SER ALA SER GLU VAL ILE ARG SER ALA LEU ARG LEU SEQRES 4 C 80 LEU GLU ASN GLN GLU THR LYS LEU GLN SER LEU ARG GLN SEQRES 5 C 80 LEU LEU ILE GLU GLY GLU GLN SER GLY ASP ALA ASP TYR SEQRES 6 C 80 ASP LEU ASP SER PHE ILE ASN GLU LEU ASP SER GLU ASN SEQRES 7 C 80 ILE ARG SEQRES 1 D 80 MET ALA LYS ASN THR SER ILE THR LEU GLY GLU HIS PHE SEQRES 2 D 80 ASP GLY PHE ILE THR SER GLN ILE GLN SER GLY ARG TYR SEQRES 3 D 80 GLY SER ALA SER GLU VAL ILE ARG SER ALA LEU ARG LEU SEQRES 4 D 80 LEU GLU ASN GLN GLU THR LYS LEU GLN SER LEU ARG GLN SEQRES 5 D 80 LEU LEU ILE GLU GLY GLU GLN SER GLY ASP ALA ASP TYR SEQRES 6 D 80 ASP LEU ASP SER PHE ILE ASN GLU LEU ASP SER GLU ASN SEQRES 7 D 80 ILE ARG HELIX 1 AA1 VAL A 8 TRP A 25 1 18 HELIX 2 AA2 GLY A 26 ASN A 47 1 22 HELIX 3 AA3 PRO A 48 GLY A 51 5 4 HELIX 4 AA4 GLY B 10 SER B 23 1 14 HELIX 5 AA5 SER B 28 GLN B 59 1 32 HELIX 6 AA6 ASP B 66 ASN B 78 1 13 HELIX 7 AA7 GLY C 10 GLN C 22 1 13 HELIX 8 AA8 SER C 28 SER C 49 1 22 HELIX 9 AA9 GLY D 10 SER D 23 1 14 HELIX 10 AB1 SER D 28 LEU D 47 1 20 SHEET 1 AA1 6 LYS A 52 SER A 53 0 SHEET 2 AA1 6 TYR A 61 GLN A 66 -1 O LYS A 63 N LYS A 52 SHEET 3 AA1 6 HIS A 69 GLN A 75 -1 O TYR A 73 N ARG A 62 SHEET 4 AA1 6 ILE A 81 HIS A 88 -1 O ARG A 85 N PHE A 72 SHEET 5 AA1 6 PHE A 4 THR A 7 1 N ASN A 5 O VAL A 83 SHEET 6 AA1 6 ASP B 62 ALA B 63 -1 O ALA B 63 N LEU A 6 CRYST1 65.780 65.780 127.440 90.00 90.00 90.00 P 43 21 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015202 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015202 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007847 0.00000