HEADER LIGASE 27-JUN-21 7R8P TITLE OPEN FORM OF SAOUHSC_02373 IN COMPLEX WITH ADP, MG2+ AND NA+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP-GRASP DOMAIN-CONTAINING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS (STRAIN NCTC 8325 / PS SOURCE 3 47); SOURCE 4 ORGANISM_TAXID: 93061; SOURCE 5 STRAIN: NCTC 8325 / PS 47; SOURCE 6 GENE: SAOUHSC_02373; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS ATP-GRASP SUPERFAMILY, L-AMINO ACID LIGASE, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR J.L.PEDERICK,J.B.BRUNING REVDAT 3 03-APR-24 7R8P 1 REMARK REVDAT 2 05-OCT-22 7R8P 1 JRNL REVDAT 1 14-SEP-22 7R8P 0 JRNL AUTH J.L.PEDERICK,A.J.HORSFALL,B.JOVCEVSKI,J.KLOSE,A.D.ABELL, JRNL AUTH 2 T.L.PUKALA,J.B.BRUNING JRNL TITL DISCOVERY OF AN ʟ-AMINO ACID LIGASE IMPLICATED IN JRNL TITL 2 STAPHYLOCOCCAL SULFUR AMINO ACID METABOLISM. JRNL REF J.BIOL.CHEM. V. 298 02392 2022 JRNL REFN ESSN 1083-351X JRNL PMID 35988643 JRNL DOI 10.1016/J.JBC.2022.102392 REMARK 2 REMARK 2 RESOLUTION. 1.37 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2-3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.37 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 79522 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 3929 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.4500 - 4.1600 1.00 2931 138 0.1680 0.1947 REMARK 3 2 4.1600 - 3.3000 1.00 2802 139 0.1529 0.1693 REMARK 3 3 3.3000 - 2.8800 1.00 2763 141 0.1829 0.1944 REMARK 3 4 2.8800 - 2.6200 1.00 2732 144 0.1979 0.2329 REMARK 3 5 2.6200 - 2.4300 1.00 2706 146 0.2012 0.2247 REMARK 3 6 2.4300 - 2.2900 1.00 2739 117 0.1909 0.2217 REMARK 3 7 2.2900 - 2.1700 1.00 2718 144 0.1934 0.2183 REMARK 3 8 2.1700 - 2.0800 1.00 2693 154 0.1945 0.2222 REMARK 3 9 2.0800 - 2.0000 1.00 2720 125 0.2050 0.2196 REMARK 3 10 2.0000 - 1.9300 1.00 2663 150 0.2045 0.2348 REMARK 3 11 1.9300 - 1.8700 1.00 2716 132 0.2096 0.2463 REMARK 3 12 1.8700 - 1.8200 1.00 2683 149 0.2019 0.2376 REMARK 3 13 1.8200 - 1.7700 1.00 2675 156 0.2027 0.2195 REMARK 3 14 1.7700 - 1.7300 1.00 2649 150 0.2139 0.2139 REMARK 3 15 1.7300 - 1.6900 1.00 2703 137 0.2138 0.2364 REMARK 3 16 1.6900 - 1.6500 1.00 2683 149 0.2161 0.2663 REMARK 3 17 1.6500 - 1.6200 1.00 2676 124 0.2208 0.2040 REMARK 3 18 1.6200 - 1.5900 1.00 2685 144 0.2251 0.2598 REMARK 3 19 1.5900 - 1.5600 1.00 2653 130 0.2254 0.2694 REMARK 3 20 1.5600 - 1.5300 1.00 2674 134 0.2251 0.2403 REMARK 3 21 1.5300 - 1.5100 1.00 2679 137 0.2401 0.2839 REMARK 3 22 1.5100 - 1.4800 1.00 2699 137 0.2350 0.3186 REMARK 3 23 1.4800 - 1.4600 1.00 2622 139 0.2494 0.2631 REMARK 3 24 1.4600 - 1.4400 1.00 2696 154 0.2581 0.3018 REMARK 3 25 1.4400 - 1.4200 1.00 2604 155 0.2672 0.3073 REMARK 3 26 1.4200 - 1.4000 1.00 2670 146 0.2797 0.3132 REMARK 3 27 1.4000 - 1.3900 1.00 2698 125 0.2838 0.3066 REMARK 3 28 1.3900 - 1.3700 1.00 2661 133 0.2992 0.3242 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7R8P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1000257787. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-OCT-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 79614 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.370 REMARK 200 RESOLUTION RANGE LOW (A) : 39.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.37 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.00 REMARK 200 R MERGE FOR SHELL (I) : 1.65400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: FRAGON 0.2.4 REMARK 200 STARTING MODEL: 2 IDEAL ALPHA HELICES OF 10AA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM SODIUM ACETATE TRIHYDRATE, 100 REMARK 280 MM TRIS-HCL PH 8.5, 30% PEG 4000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.12900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.88650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.29050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.88650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.12900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.29050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ASN A 3 REMARK 465 ASN A 4 REMARK 465 GLY A 5 REMARK 465 ASN A 6 REMARK 465 GLU A 7 REMARK 465 PRO A 8 REMARK 465 TYR A 28 REMARK 465 ILE A 29 REMARK 465 SER A 30 REMARK 465 ASN A 31 REMARK 465 PRO A 32 REMARK 465 TRP A 33 REMARK 465 LEU A 34 REMARK 465 LYS A 35 REMARK 465 PRO A 36 REMARK 465 ASP A 176 REMARK 465 ASP A 177 REMARK 465 LEU A 178 REMARK 465 PRO A 179 REMARK 465 THR A 180 REMARK 465 ALA A 181 REMARK 465 GLY A 182 REMARK 465 GLY A 183 REMARK 465 GLU A 204 REMARK 465 ALA A 205 REMARK 465 THR A 206 REMARK 465 ALA A 207 REMARK 465 GLU A 208 REMARK 465 THR A 209 REMARK 465 HIS A 396 REMARK 465 TYR A 397 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 18 CG CD CE NZ REMARK 470 ASP A 37 CG OD1 OD2 REMARK 470 GLU A 38 CG CD OE1 OE2 REMARK 470 GLU A 78 CG CD OE1 OE2 REMARK 470 GLN A 98 CG CD OE1 NE2 REMARK 470 GLU A 115 CG CD OE1 OE2 REMARK 470 LYS A 197 CG CD CE NZ REMARK 470 ARG A 201 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 232 CG CD OE1 OE2 REMARK 470 GLU A 263 CG CD OE1 OE2 REMARK 470 GLU A 395 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 301 O HOH A 501 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 53 -108.33 59.23 REMARK 500 ALA A 64 47.63 -141.35 REMARK 500 ASP A 126 116.54 -34.12 REMARK 500 ASN A 260 64.99 -108.27 REMARK 500 ARG A 305 170.20 175.46 REMARK 500 ARG A 305 171.93 178.06 REMARK 500 ASP A 365 19.81 58.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 878 DISTANCE = 6.13 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 288 OD2 REMARK 620 2 ASP A 301 OD2 93.5 REMARK 620 3 ADP A 401 O3B 176.3 86.2 REMARK 620 4 ADP A 401 O1A 100.6 95.6 83.1 REMARK 620 5 HOH A 595 O 89.6 173.5 90.3 89.3 REMARK 620 6 HOH A 679 O 90.8 86.8 85.5 168.2 87.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 403 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 301 OD1 REMARK 620 2 LEU A 302 O 94.9 REMARK 620 3 ASN A 303 OD1 90.0 91.8 REMARK 620 4 HOH A 638 O 93.7 93.6 173.1 REMARK 620 5 HOH A 651 O 178.7 85.3 88.6 87.6 REMARK 620 6 HOH A 713 O 92.4 170.0 81.3 92.8 87.3 REMARK 620 N 1 2 3 4 5 DBREF 7R8P A 1 397 UNP Q2FWC5 Q2FWC5_STAA8 1 397 SEQADV 7R8P MET A -8 UNP Q2FWC5 INITIATING METHIONINE SEQADV 7R8P HIS A -7 UNP Q2FWC5 EXPRESSION TAG SEQADV 7R8P HIS A -6 UNP Q2FWC5 EXPRESSION TAG SEQADV 7R8P HIS A -5 UNP Q2FWC5 EXPRESSION TAG SEQADV 7R8P HIS A -4 UNP Q2FWC5 EXPRESSION TAG SEQADV 7R8P HIS A -3 UNP Q2FWC5 EXPRESSION TAG SEQADV 7R8P HIS A -2 UNP Q2FWC5 EXPRESSION TAG SEQADV 7R8P HIS A -1 UNP Q2FWC5 EXPRESSION TAG SEQADV 7R8P HIS A 0 UNP Q2FWC5 EXPRESSION TAG SEQRES 1 A 406 MET HIS HIS HIS HIS HIS HIS HIS HIS MET THR ASN ASN SEQRES 2 A 406 GLY ASN GLU PRO ASN LEU THR LEU SER ASP LEU TYR ASP SEQRES 3 A 406 LYS ASP VAL VAL TYR THR SER ARG PRO SER TYR ILE SER SEQRES 4 A 406 ASN PRO TRP LEU LYS PRO ASP GLU HIS GLN SER ASN PHE SEQRES 5 A 406 LEU THR GLY ARG GLU LEU LEU ILE ALA ASN GLN LEU PRO SEQRES 6 A 406 VAL ILE VAL HIS GLU ALA SER ALA THR ASP LYS LEU HIS SEQRES 7 A 406 GLN LEU PHE GLN VAL ILE GLY LYS GLU VAL PRO ASN SER SEQRES 8 A 406 ILE TYR THR PHE ASN ASN GLN GLN SER TYR GLU ASN LEU SEQRES 9 A 406 ILE LYS GLN LEU ALA HIS LYS GLU ASN LYS LYS ILE TYR SEQRES 10 A 406 PHE GLN TYR ILE HIS ASP GLU THR ILE LEU ASN GLN GLN SEQRES 11 A 406 TYR TYR ALA LEU ASP LYS THR LEU PHE VAL ALA LEU ASN SEQRES 12 A 406 ASN LYS ALA ARG ILE PRO GLU TRP THR ASN GLY LYS PHE SEQRES 13 A 406 LEU PRO LYS ARG LYS VAL VAL LYS ILE GLU GLN PHE GLU SEQRES 14 A 406 ASN GLU ILE LYS ASN TRP GLU PHE PRO LEU VAL ILE LYS SEQRES 15 A 406 PRO GLY ASP ASP LEU PRO THR ALA GLY GLY TYR GLY VAL SEQRES 16 A 406 MET ILE CYS TYR HIS ASP ALA ASP LEU GLN LYS ALA ILE SEQRES 17 A 406 THR ARG ILE LYS GLU ALA THR ALA GLU THR ASN SER LEU SEQRES 18 A 406 ILE ILE GLU GLN LYS ILE GLU GLU LYS ALA ASN TYR CYS SEQRES 19 A 406 VAL GLN PHE ALA TYR SER GLU SER LEU GLY ILE GLN TYR SEQRES 20 A 406 LEU GLY ALA ALA THR GLN LEU THR ASP LYS TYR GLY PHE SEQRES 21 A 406 TYR ASN GLY ASN GLU ASN THR THR ASN VAL PRO GLU HIS SEQRES 22 A 406 VAL ILE GLU ALA GLY ARG GLN ILE MET GLU ASN GLY VAL SEQRES 23 A 406 ASN GLN GLY PHE PHE GLY VAL ALA GLY PHE ASP LEU LEU SEQRES 24 A 406 VAL ASP GLU ASP ASP ASN VAL TYR ALA ILE ASP LEU ASN SEQRES 25 A 406 PHE ARG GLN ASN GLY SER THR SER MET LEU LEU LEU ALA SEQRES 26 A 406 ASN GLU LEU ASN SER GLY TYR GLN LYS PHE TYR SER TYR SEQRES 27 A 406 HIS SER LYS GLY ASP ASN THR HIS PHE PHE ASN THR ILE SEQRES 28 A 406 LEU LYS TYR VAL LYS GLU GLY SER LEU TYR PRO LEU SER SEQRES 29 A 406 TYR TYR ASP GLY ASP TRP TYR GLY GLU ASP LYS VAL LYS SEQRES 30 A 406 SER ARG PHE GLY CYS ILE TRP HIS GLY ASP SER LYS GLU SEQRES 31 A 406 THR VAL LEU GLU ASN GLU ARG ALA PHE LEU ALA GLU LEU SEQRES 32 A 406 GLU HIS TYR HET ADP A 401 27 HET MG A 402 1 HET NA A 403 1 HET CL A 404 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 MG MG 2+ FORMUL 4 NA NA 1+ FORMUL 5 CL CL 1- FORMUL 6 HOH *378(H2 O) HELIX 1 AA1 THR A 11 LEU A 15 5 5 HELIX 2 AA2 GLU A 38 THR A 45 1 8 HELIX 3 AA3 GLU A 48 ASN A 53 1 6 HELIX 4 AA4 ALA A 62 ALA A 64 5 3 HELIX 5 AA5 THR A 65 ILE A 75 1 11 HELIX 6 AA6 ASN A 88 GLU A 103 1 16 HELIX 7 AA7 ASN A 119 TYR A 123 5 5 HELIX 8 AA8 ASP A 126 ASN A 134 1 9 HELIX 9 AA9 ASN A 135 ALA A 137 5 3 HELIX 10 AB1 ARG A 138 ASN A 144 1 7 HELIX 11 AB2 ILE A 156 LYS A 164 1 9 HELIX 12 AB3 HIS A 191 LYS A 203 1 13 HELIX 13 AB4 PRO A 262 GLN A 279 1 18 HELIX 14 AB5 ASN A 307 LEU A 315 1 9 HELIX 15 AB6 ALA A 316 LEU A 319 5 4 HELIX 16 AB7 ASP A 334 GLY A 349 1 16 HELIX 17 AB8 ASP A 358 GLY A 363 5 6 HELIX 18 AB9 SER A 379 GLU A 395 1 17 SHEET 1 AA1 2 VAL A 20 THR A 23 0 SHEET 2 AA1 2 LYS A 106 PHE A 109 1 O TYR A 108 N VAL A 21 SHEET 1 AA2 2 VAL A 57 HIS A 60 0 SHEET 2 AA2 2 ILE A 83 PHE A 86 1 O TYR A 84 N VAL A 59 SHEET 1 AA3 4 ARG A 151 LYS A 155 0 SHEET 2 AA3 4 SER A 211 GLN A 216 -1 O LEU A 212 N VAL A 154 SHEET 3 AA3 4 LEU A 170 PRO A 174 -1 N LYS A 173 O ILE A 213 SHEET 4 AA3 4 MET A 187 CYS A 189 -1 O CYS A 189 N LEU A 170 SHEET 1 AA4 8 VAL A 297 ASN A 303 0 SHEET 2 AA4 8 GLY A 283 VAL A 291 -1 N ASP A 288 O ASP A 301 SHEET 3 AA4 8 ALA A 222 SER A 231 -1 N TYR A 224 O LEU A 289 SHEET 4 AA4 8 GLY A 235 THR A 246 -1 O GLN A 237 N ALA A 229 SHEET 5 AA4 8 TYR A 252 THR A 258 -1 O ASN A 253 N LEU A 245 SHEET 6 AA4 8 TYR A 323 HIS A 330 -1 O PHE A 326 N ASN A 255 SHEET 7 AA4 8 ARG A 370 GLY A 377 -1 O TRP A 375 N LYS A 325 SHEET 8 AA4 8 LEU A 351 TYR A 357 -1 N TYR A 352 O ILE A 374 LINK OD2 ASP A 288 MG MG A 402 1555 1555 2.01 LINK OD2 ASP A 301 MG MG A 402 1555 1555 2.18 LINK OD1 ASP A 301 NA NA A 403 1555 1555 2.34 LINK O LEU A 302 NA NA A 403 1555 1555 2.59 LINK OD1 ASN A 303 NA NA A 403 1555 1555 2.50 LINK O3B ADP A 401 MG MG A 402 1555 1555 2.03 LINK O1A ADP A 401 MG MG A 402 1555 1555 2.02 LINK MG MG A 402 O HOH A 595 1555 1555 2.16 LINK MG MG A 402 O HOH A 679 1555 1555 2.16 LINK NA NA A 403 O HOH A 638 1555 1555 2.38 LINK NA NA A 403 O HOH A 651 1555 1555 2.34 LINK NA NA A 403 O HOH A 713 1555 1555 2.43 CISPEP 1 PHE A 168 PRO A 169 0 0.51 CRYST1 48.258 70.581 109.773 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020722 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014168 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009110 0.00000