HEADER TRANSFERASE/TRANSFERASE INHIBITOR 29-JUN-21 7R9T TITLE CRYSTAL STRUCTURE OF HPK1 IN COMPLEX WITH COMPOUND 17 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMATOPOIETIC PROGENITOR KINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: HKP1, HEMATOPOIETIC PROGENITOR KINASE, MAPK/ERK KINASE COMPND 5 KINASE KINASE 1, MEKKK 1; COMPND 6 EC: 2.7.11.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAP4K1, HPK1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS KINASE, INHIBITOR, MAP4K1, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR P.WU,I.LEHOUX,W.WANG REVDAT 3 18-OCT-23 7R9T 1 REMARK REVDAT 2 09-FEB-22 7R9T 1 JRNL REVDAT 1 05-JAN-22 7R9T 0 JRNL AUTH B.K.CHAN,E.SEWARD,M.LAINCHBURY,T.F.BREWER,L.AN,T.BLENCH, JRNL AUTH 2 M.W.CARTWRIGHT,G.K.Y.CHAN,E.F.CHOO,J.DRUMMOND,R.L.ELLIOTT, JRNL AUTH 3 E.GANCIA,L.GAZZARD,B.HU,G.E.JONES,X.LUO,A.MADIN,S.MALHOTRA, JRNL AUTH 4 J.G.MOFFAT,J.PANG,L.SALPHATI,C.J.SNEERINGER,C.E.STIVALA, JRNL AUTH 5 B.WEI,W.WANG,P.WU,T.P.HEFFRON JRNL TITL DISCOVERY OF SPIRO-AZAINDOLINE INHIBITORS OF HEMATOPOIETIC JRNL TITL 2 PROGENITOR KINASE 1 (HPK1). JRNL REF ACS MED.CHEM.LETT. V. 13 84 2022 JRNL REFN ISSN 1948-5875 JRNL PMID 35059127 JRNL DOI 10.1021/ACSMEDCHEMLETT.1C00473 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1-4122_FINAL REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.2 REMARK 3 NUMBER OF REFLECTIONS : 35166 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.660 REMARK 3 FREE R VALUE TEST SET COUNT : 1639 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.0300 - 4.5800 0.86 2808 134 0.1828 0.2146 REMARK 3 2 4.5700 - 3.6300 0.89 2858 134 0.1621 0.1930 REMARK 3 3 3.6300 - 3.1700 0.87 2847 139 0.1837 0.2075 REMARK 3 4 3.1700 - 2.8800 0.88 2875 128 0.2033 0.2213 REMARK 3 5 2.8800 - 2.6800 0.90 2932 127 0.2212 0.2247 REMARK 3 6 2.6800 - 2.5200 0.89 2899 147 0.2111 0.2405 REMARK 3 7 2.5200 - 2.3900 0.82 2664 110 0.2170 0.2608 REMARK 3 8 2.3900 - 2.2900 0.88 2868 133 0.2075 0.2496 REMARK 3 9 2.2900 - 2.2000 0.90 2924 147 0.2225 0.2844 REMARK 3 10 2.2000 - 2.1200 0.90 2894 160 0.2265 0.2407 REMARK 3 11 2.1200 - 2.0600 0.86 2777 148 0.2373 0.3076 REMARK 3 12 2.0600 - 2.0000 0.68 2181 132 0.2365 0.2449 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.130 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.21 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 3:93 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.909 -71.336 254.231 REMARK 3 T TENSOR REMARK 3 T11: 0.2215 T22: 0.2755 REMARK 3 T33: 0.2505 T12: 0.0068 REMARK 3 T13: -0.0069 T23: 0.0424 REMARK 3 L TENSOR REMARK 3 L11: 0.8070 L22: 0.4003 REMARK 3 L33: 0.6615 L12: 0.3582 REMARK 3 L13: -0.0776 L23: -0.3835 REMARK 3 S TENSOR REMARK 3 S11: -0.0219 S12: 0.3097 S13: -0.0166 REMARK 3 S21: -0.1745 S22: 0.0023 S23: -0.1145 REMARK 3 S31: 0.0797 S32: 0.1991 S33: 0.0002 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 94:293 ) REMARK 3 ORIGIN FOR THE GROUP (A): -56.947 -82.020 259.260 REMARK 3 T TENSOR REMARK 3 T11: 0.1327 T22: 0.1176 REMARK 3 T33: 0.1427 T12: 0.0007 REMARK 3 T13: -0.0111 T23: -0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.2465 L22: 0.7154 REMARK 3 L33: 1.3107 L12: -0.0403 REMARK 3 L13: 0.2290 L23: 0.5514 REMARK 3 S TENSOR REMARK 3 S11: 0.0116 S12: 0.0457 S13: -0.0452 REMARK 3 S21: -0.0293 S22: -0.0034 S23: 0.0044 REMARK 3 S31: 0.0114 S32: 0.0145 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN B AND RESID 4:93 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.258 -118.638 233.346 REMARK 3 T TENSOR REMARK 3 T11: 0.2915 T22: 0.4121 REMARK 3 T33: 0.3661 T12: 0.0282 REMARK 3 T13: -0.0021 T23: 0.0297 REMARK 3 L TENSOR REMARK 3 L11: 0.4737 L22: 0.3725 REMARK 3 L33: 0.6798 L12: -0.0097 REMARK 3 L13: 0.0131 L23: -0.4674 REMARK 3 S TENSOR REMARK 3 S11: 0.0528 S12: -0.1807 S13: 0.1669 REMARK 3 S21: -0.0245 S22: -0.0754 S23: -0.3404 REMARK 3 S31: 0.0238 S32: 0.6041 S33: 0.0016 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN B AND RESID 94:294 ) REMARK 3 ORIGIN FOR THE GROUP (A): -56.031 -106.626 228.135 REMARK 3 T TENSOR REMARK 3 T11: 0.1476 T22: 0.1123 REMARK 3 T33: 0.1308 T12: -0.0012 REMARK 3 T13: -0.0008 T23: 0.0021 REMARK 3 L TENSOR REMARK 3 L11: 0.8048 L22: 0.6601 REMARK 3 L33: 1.3533 L12: 0.0496 REMARK 3 L13: -0.1961 L23: 0.3189 REMARK 3 S TENSOR REMARK 3 S11: 0.0011 S12: -0.0476 S13: 0.0620 REMARK 3 S21: -0.0319 S22: 0.0154 S23: -0.0500 REMARK 3 S31: -0.0802 S32: 0.0868 S33: 0.0003 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7R9T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUN-21. REMARK 100 THE DEPOSITION ID IS D_1000257856. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979500 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35176 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 87.1 REMARK 200 DATA REDUNDANCY : 2.200 REMARK 200 R MERGE (I) : 0.11600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.9 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.31200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6CQD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5 AND 12% PEG 8000, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 SER A 1 REMARK 465 ASP A 2 REMARK 465 GLY A 294 REMARK 465 ASN A 295 REMARK 465 SER A 296 REMARK 465 GLY B 0 REMARK 465 SER B 1 REMARK 465 ASP B 2 REMARK 465 VAL B 3 REMARK 465 VAL B 38 REMARK 465 SER B 39 REMARK 465 PRO B 52 REMARK 465 ASP B 53 REMARK 465 ASP B 54 REMARK 465 ASP B 55 REMARK 465 ASN B 295 REMARK 465 SER B 296 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 624 O HOH B 768 1.77 REMARK 500 O HOH B 837 O HOH B 876 1.85 REMARK 500 O HOH A 404 O HOH A 570 1.89 REMARK 500 O ASP B 36 O HOH B 601 1.90 REMARK 500 OD2 ASP A 54 O HOH A 401 1.91 REMARK 500 OE2 GLU A 194 O HOH A 402 1.96 REMARK 500 O HOH A 674 O HOH A 694 1.96 REMARK 500 NE2 GLN A 21 O HOH A 403 1.99 REMARK 500 N GLY B 40 O HOH B 602 2.00 REMARK 500 O HOH A 577 O HOH A 677 2.00 REMARK 500 O HOH A 629 O HOH A 679 2.01 REMARK 500 O HOH B 674 O HOH B 713 2.02 REMARK 500 O HOH B 614 O HOH B 742 2.02 REMARK 500 O HOH B 799 O HOH B 857 2.02 REMARK 500 OG SER B 130 O HOH B 603 2.06 REMARK 500 NE2 GLN B 233 O HOH B 604 2.08 REMARK 500 ND2 ASN B 280 O HOH B 605 2.09 REMARK 500 O HOH A 499 O HOH A 547 2.09 REMARK 500 O HOH B 791 O HOH B 835 2.09 REMARK 500 OD1 ASP A 41 O HOH A 404 2.10 REMARK 500 O HOH B 776 O HOH B 884 2.10 REMARK 500 OD1 ASP B 289 O HOH B 606 2.11 REMARK 500 O HOH B 813 O HOH B 901 2.12 REMARK 500 O HOH A 518 O HOH A 681 2.12 REMARK 500 NH1 ARG A 70 O HOH A 405 2.13 REMARK 500 O HOH B 888 O HOH B 896 2.15 REMARK 500 O HOH A 630 O HOH A 653 2.16 REMARK 500 NH2 ARG B 11 O HOH B 607 2.16 REMARK 500 O HOH B 749 O HOH B 875 2.16 REMARK 500 NE ARG A 70 O HOH A 406 2.17 REMARK 500 O HOH A 674 O HOH A 712 2.17 REMARK 500 O HOH A 475 O HOH A 716 2.17 REMARK 500 O HOH B 748 O HOH B 829 2.17 REMARK 500 OE2 GLU B 92 O HOH B 608 2.18 REMARK 500 NH2 ARG B 22 O HOH B 609 2.19 REMARK 500 O HOH B 791 O HOH B 916 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 515 O HOH B 748 1466 1.96 REMARK 500 O HOH A 683 O HOH B 729 1465 1.98 REMARK 500 O HOH A 543 O HOH B 620 1466 2.12 REMARK 500 O HOH B 809 O HOH B 840 1645 2.17 REMARK 500 O HOH A 649 O HOH B 772 1556 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 137 48.84 -141.50 REMARK 500 ASP A 155 83.98 64.02 REMARK 500 LEU A 255 39.14 -87.77 REMARK 500 LEU B 20 -132.67 -96.36 REMARK 500 ASP B 137 42.52 -148.64 REMARK 500 ASP B 155 80.30 67.75 REMARK 500 SER B 230 -25.42 73.32 REMARK 500 LEU B 255 35.02 -98.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 730 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH B 924 DISTANCE = 6.16 ANGSTROMS DBREF 7R9T A 2 293 UNP Q92918 M4K1_HUMAN 2 293 DBREF 7R9T B 2 293 UNP Q92918 M4K1_HUMAN 2 293 SEQADV 7R9T GLY A 0 UNP Q92918 EXPRESSION TAG SEQADV 7R9T SER A 1 UNP Q92918 EXPRESSION TAG SEQADV 7R9T GLU A 165 UNP Q92918 THR 165 CONFLICT SEQADV 7R9T GLU A 171 UNP Q92918 SER 171 CONFLICT SEQADV 7R9T GLY A 294 UNP Q92918 EXPRESSION TAG SEQADV 7R9T ASN A 295 UNP Q92918 EXPRESSION TAG SEQADV 7R9T SER A 296 UNP Q92918 EXPRESSION TAG SEQADV 7R9T GLY B 0 UNP Q92918 EXPRESSION TAG SEQADV 7R9T SER B 1 UNP Q92918 EXPRESSION TAG SEQADV 7R9T GLU B 165 UNP Q92918 THR 165 CONFLICT SEQADV 7R9T GLU B 171 UNP Q92918 SER 171 CONFLICT SEQADV 7R9T GLY B 294 UNP Q92918 EXPRESSION TAG SEQADV 7R9T ASN B 295 UNP Q92918 EXPRESSION TAG SEQADV 7R9T SER B 296 UNP Q92918 EXPRESSION TAG SEQRES 1 A 297 GLY SER ASP VAL VAL ASP PRO ASP ILE PHE ASN ARG ASP SEQRES 2 A 297 PRO ARG ASP HIS TYR ASP LEU LEU GLN ARG LEU GLY GLY SEQRES 3 A 297 GLY THR TYR GLY GLU VAL PHE LYS ALA ARG ASP LYS VAL SEQRES 4 A 297 SER GLY ASP LEU VAL ALA LEU LYS MET VAL LYS MET GLU SEQRES 5 A 297 PRO ASP ASP ASP VAL SER THR LEU GLN LYS GLU ILE LEU SEQRES 6 A 297 ILE LEU LYS THR CYS ARG HIS ALA ASN ILE VAL ALA TYR SEQRES 7 A 297 HIS GLY SER TYR LEU TRP LEU GLN LYS LEU TRP ILE CYS SEQRES 8 A 297 MET GLU PHE CYS GLY ALA GLY SER LEU GLN ASP ILE TYR SEQRES 9 A 297 GLN VAL THR GLY SER LEU SER GLU LEU GLN ILE SER TYR SEQRES 10 A 297 VAL CYS ARG GLU VAL LEU GLN GLY LEU ALA TYR LEU HIS SEQRES 11 A 297 SER GLN LYS LYS ILE HIS ARG ASP ILE LYS GLY ALA ASN SEQRES 12 A 297 ILE LEU ILE ASN ASP ALA GLY GLU VAL ARG LEU ALA ASP SEQRES 13 A 297 PHE GLY ILE SER ALA GLN ILE GLY ALA GLU LEU ALA ARG SEQRES 14 A 297 ARG LEU GLU PHE ILE GLY THR PRO TYR TRP MET ALA PRO SEQRES 15 A 297 GLU VAL ALA ALA VAL ALA LEU LYS GLY GLY TYR ASN GLU SEQRES 16 A 297 LEU CYS ASP ILE TRP SER LEU GLY ILE THR ALA ILE GLU SEQRES 17 A 297 LEU ALA GLU LEU GLN PRO PRO LEU PHE ASP VAL HIS PRO SEQRES 18 A 297 LEU ARG VAL LEU PHE LEU MET THR LYS SER GLY TYR GLN SEQRES 19 A 297 PRO PRO ARG LEU LYS GLU LYS GLY LYS TRP SER ALA ALA SEQRES 20 A 297 PHE HIS ASN PHE ILE LYS VAL THR LEU THR LYS SER PRO SEQRES 21 A 297 LYS LYS ARG PRO SER ALA THR LYS MET LEU SER HIS GLN SEQRES 22 A 297 LEU VAL SER GLN PRO GLY LEU ASN ARG GLY LEU ILE LEU SEQRES 23 A 297 ASP LEU LEU ASP LYS LEU LYS ASN GLY ASN SER SEQRES 1 B 297 GLY SER ASP VAL VAL ASP PRO ASP ILE PHE ASN ARG ASP SEQRES 2 B 297 PRO ARG ASP HIS TYR ASP LEU LEU GLN ARG LEU GLY GLY SEQRES 3 B 297 GLY THR TYR GLY GLU VAL PHE LYS ALA ARG ASP LYS VAL SEQRES 4 B 297 SER GLY ASP LEU VAL ALA LEU LYS MET VAL LYS MET GLU SEQRES 5 B 297 PRO ASP ASP ASP VAL SER THR LEU GLN LYS GLU ILE LEU SEQRES 6 B 297 ILE LEU LYS THR CYS ARG HIS ALA ASN ILE VAL ALA TYR SEQRES 7 B 297 HIS GLY SER TYR LEU TRP LEU GLN LYS LEU TRP ILE CYS SEQRES 8 B 297 MET GLU PHE CYS GLY ALA GLY SER LEU GLN ASP ILE TYR SEQRES 9 B 297 GLN VAL THR GLY SER LEU SER GLU LEU GLN ILE SER TYR SEQRES 10 B 297 VAL CYS ARG GLU VAL LEU GLN GLY LEU ALA TYR LEU HIS SEQRES 11 B 297 SER GLN LYS LYS ILE HIS ARG ASP ILE LYS GLY ALA ASN SEQRES 12 B 297 ILE LEU ILE ASN ASP ALA GLY GLU VAL ARG LEU ALA ASP SEQRES 13 B 297 PHE GLY ILE SER ALA GLN ILE GLY ALA GLU LEU ALA ARG SEQRES 14 B 297 ARG LEU GLU PHE ILE GLY THR PRO TYR TRP MET ALA PRO SEQRES 15 B 297 GLU VAL ALA ALA VAL ALA LEU LYS GLY GLY TYR ASN GLU SEQRES 16 B 297 LEU CYS ASP ILE TRP SER LEU GLY ILE THR ALA ILE GLU SEQRES 17 B 297 LEU ALA GLU LEU GLN PRO PRO LEU PHE ASP VAL HIS PRO SEQRES 18 B 297 LEU ARG VAL LEU PHE LEU MET THR LYS SER GLY TYR GLN SEQRES 19 B 297 PRO PRO ARG LEU LYS GLU LYS GLY LYS TRP SER ALA ALA SEQRES 20 B 297 PHE HIS ASN PHE ILE LYS VAL THR LEU THR LYS SER PRO SEQRES 21 B 297 LYS LYS ARG PRO SER ALA THR LYS MET LEU SER HIS GLN SEQRES 22 B 297 LEU VAL SER GLN PRO GLY LEU ASN ARG GLY LEU ILE LEU SEQRES 23 B 297 ASP LEU LEU ASP LYS LEU LYS ASN GLY ASN SER HET 2TR A 301 28 HET 2TR B 301 28 HETNAM 2TR 6-AMINO-3-[(1S,3R)-4'-CHLORO-3-HYDROXY-1',2'- HETNAM 2 2TR DIHYDROSPIRO[CYCLOPENTANE-1,3'-PYRROLO[2,3-B]PYRIDIN]- HETNAM 3 2TR 5'-YL]-2-FLUORO-N,N-DIMETHYLBENZAMIDE FORMUL 3 2TR 2(C20 H22 CL F N4 O2) FORMUL 5 HOH *654(H2 O) HELIX 1 AA1 ASP A 12 ASP A 15 5 4 HELIX 2 AA2 GLY A 24 THR A 27 5 4 HELIX 3 AA3 VAL A 56 THR A 68 1 13 HELIX 4 AA4 SER A 98 GLY A 107 1 10 HELIX 5 AA5 SER A 110 GLN A 131 1 22 HELIX 6 AA6 LYS A 139 ALA A 141 5 3 HELIX 7 AA7 PHE A 156 PHE A 172 1 17 HELIX 8 AA8 ALA A 180 GLY A 190 1 11 HELIX 9 AA9 LEU A 195 LEU A 211 1 17 HELIX 10 AB1 HIS A 219 THR A 228 1 10 HELIX 11 AB2 GLU A 239 TRP A 243 5 5 HELIX 12 AB3 SER A 244 LEU A 255 1 12 HELIX 13 AB4 SER A 258 ARG A 262 5 5 HELIX 14 AB5 SER A 264 LEU A 269 1 6 HELIX 15 AB6 HIS A 271 GLN A 276 1 6 HELIX 16 AB7 ARG A 281 ASN A 293 1 13 HELIX 17 AB8 ASP B 12 ASP B 15 5 4 HELIX 18 AB9 GLY B 24 THR B 27 5 4 HELIX 19 AC1 SER B 57 CYS B 69 1 13 HELIX 20 AC2 SER B 98 GLY B 107 1 10 HELIX 21 AC3 SER B 110 GLN B 131 1 22 HELIX 22 AC4 LYS B 139 ALA B 141 5 3 HELIX 23 AC5 PHE B 156 PHE B 172 1 17 HELIX 24 AC6 ALA B 180 GLY B 190 1 11 HELIX 25 AC7 LEU B 195 LEU B 211 1 17 HELIX 26 AC8 HIS B 219 THR B 228 1 10 HELIX 27 AC9 GLU B 239 TRP B 243 5 5 HELIX 28 AD1 SER B 244 LEU B 255 1 12 HELIX 29 AD2 SER B 264 LEU B 269 1 6 HELIX 30 AD3 HIS B 271 GLN B 276 1 6 HELIX 31 AD4 ARG B 281 GLY B 294 1 14 SHEET 1 AA1 5 TYR A 17 LEU A 23 0 SHEET 2 AA1 5 GLU A 30 ASP A 36 -1 O LYS A 33 N LEU A 20 SHEET 3 AA1 5 LEU A 42 LYS A 49 -1 O LEU A 45 N PHE A 32 SHEET 4 AA1 5 LYS A 86 GLU A 92 -1 O LEU A 87 N VAL A 48 SHEET 5 AA1 5 TYR A 77 LEU A 82 -1 N TYR A 81 O TRP A 88 SHEET 1 AA2 2 ILE A 143 ILE A 145 0 SHEET 2 AA2 2 VAL A 151 LEU A 153 -1 O ARG A 152 N LEU A 144 SHEET 1 AA3 5 TYR B 17 ARG B 22 0 SHEET 2 AA3 5 GLU B 30 ASP B 36 -1 O ARG B 35 N ASP B 18 SHEET 3 AA3 5 LEU B 42 LYS B 49 -1 O LEU B 45 N PHE B 32 SHEET 4 AA3 5 LYS B 86 GLU B 92 -1 O ILE B 89 N LYS B 46 SHEET 5 AA3 5 TYR B 77 TRP B 83 -1 N TYR B 81 O TRP B 88 SHEET 1 AA4 2 ILE B 143 ILE B 145 0 SHEET 2 AA4 2 VAL B 151 LEU B 153 -1 O ARG B 152 N LEU B 144 CRYST1 52.257 58.272 61.677 69.91 66.21 68.21 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019136 -0.007648 -0.006875 0.00000 SCALE2 0.000000 0.018481 -0.004329 0.00000 SCALE3 0.000000 0.000000 0.018199 0.00000