HEADER SUGAR BINDING PROTEIN 07-JUL-21 7RCL TITLE CRYSTAL STRUCTURE OF ADP-BOUND GALACTOKINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GALACTOKINASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: GALACTOSE KINASE; COMPND 5 EC: 2.7.1.6; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GALK1, GALK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: HMS174; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET21D KEYWDS GALK, GALACTOKINASE, GALACTOSE, ADP, DISULFIDE, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR F.G.WHITBY,M.D.HALL REVDAT 3 18-OCT-23 7RCL 1 REMARK REVDAT 2 06-OCT-21 7RCL 1 JRNL REVDAT 1 29-SEP-21 7RCL 0 JRNL AUTH L.LIU,M.TANG,R.PRAGANI,F.G.WHITBY,Y.Q.ZHANG,B.BALAKRISHNAN, JRNL AUTH 2 Y.FANG,S.KARAVADHI,D.TAO,C.A.LECLAIR,M.D.HALL,J.J.MARUGAN, JRNL AUTH 3 M.BOXER,M.SHEN,C.P.HILL,K.LAI,S.PATNAIK JRNL TITL STRUCTURE-BASED OPTIMIZATION OF SMALL MOLECULE HUMAN JRNL TITL 2 GALACTOKINASE INHIBITORS. JRNL REF J.MED.CHEM. V. 64 13551 2021 JRNL REFN ISSN 0022-2623 JRNL PMID 34491744 JRNL DOI 10.1021/ACS.JMEDCHEM.1C00945 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.63 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 84573 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1726 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6093 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.33 REMARK 3 BIN R VALUE (WORKING SET) : 0.2780 REMARK 3 BIN FREE R VALUE SET COUNT : 124 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 11800 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 219 REMARK 3 SOLVENT ATOMS : 397 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.03000 REMARK 3 B22 (A**2) : 2.51000 REMARK 3 B33 (A**2) : -0.47000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.256 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.216 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.178 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.248 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 12354 ; 0.013 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 11462 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 16806 ; 2.007 ; 1.648 REMARK 3 BOND ANGLES OTHERS (DEGREES): 26503 ; 1.416 ; 1.569 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1582 ; 8.776 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 653 ;31.166 ;20.368 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1971 ;18.630 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 125 ;19.617 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1591 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 14030 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2622 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 401 REMARK 3 ORIGIN FOR THE GROUP (A): 21.0799 -26.7385 -5.9596 REMARK 3 T TENSOR REMARK 3 T11: 0.1454 T22: 0.3195 REMARK 3 T33: 0.0329 T12: 0.0354 REMARK 3 T13: -0.0466 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 0.8948 L22: 0.1196 REMARK 3 L33: 0.5917 L12: -0.0228 REMARK 3 L13: -0.2856 L23: 0.2207 REMARK 3 S TENSOR REMARK 3 S11: 0.0205 S12: 0.2652 S13: -0.0169 REMARK 3 S21: 0.0581 S22: -0.0110 S23: -0.0291 REMARK 3 S31: -0.0171 S32: -0.1137 S33: -0.0095 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 401 REMARK 3 ORIGIN FOR THE GROUP (A): 15.8466 -32.1317 48.1000 REMARK 3 T TENSOR REMARK 3 T11: 0.2063 T22: 0.2150 REMARK 3 T33: 0.0531 T12: 0.0390 REMARK 3 T13: -0.0161 T23: 0.0265 REMARK 3 L TENSOR REMARK 3 L11: 0.3314 L22: 0.1865 REMARK 3 L33: 0.8678 L12: 0.1422 REMARK 3 L13: -0.0503 L23: -0.3187 REMARK 3 S TENSOR REMARK 3 S11: -0.0511 S12: 0.0145 S13: 0.0584 REMARK 3 S21: 0.0505 S22: 0.0193 S23: 0.0042 REMARK 3 S31: -0.0185 S32: -0.0764 S33: 0.0318 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 2 C 401 REMARK 3 ORIGIN FOR THE GROUP (A): 22.9339 -61.6998 -0.9639 REMARK 3 T TENSOR REMARK 3 T11: 0.2202 T22: 0.2805 REMARK 3 T33: 0.0319 T12: 0.0764 REMARK 3 T13: -0.0304 T23: -0.0622 REMARK 3 L TENSOR REMARK 3 L11: 0.0080 L22: 0.4410 REMARK 3 L33: 1.8238 L12: -0.0041 REMARK 3 L13: -0.0404 L23: 0.8003 REMARK 3 S TENSOR REMARK 3 S11: 0.0166 S12: 0.0233 S13: 0.0028 REMARK 3 S21: 0.1155 S22: 0.0876 S23: -0.0115 REMARK 3 S31: 0.3044 S32: 0.1697 S33: -0.1042 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 2 D 401 REMARK 3 ORIGIN FOR THE GROUP (A): 36.8722 -4.4608 44.5445 REMARK 3 T TENSOR REMARK 3 T11: 0.4206 T22: 0.2020 REMARK 3 T33: 0.0218 T12: -0.1697 REMARK 3 T13: -0.0404 T23: -0.0137 REMARK 3 L TENSOR REMARK 3 L11: 0.4452 L22: 0.4901 REMARK 3 L33: 1.1185 L12: 0.3684 REMARK 3 L13: -0.2448 L23: -0.4308 REMARK 3 S TENSOR REMARK 3 S11: 0.0889 S12: 0.0354 S13: 0.0249 REMARK 3 S21: 0.3127 S22: -0.1539 S23: 0.0117 REMARK 3 S31: -0.3292 S32: 0.1255 S33: 0.0650 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7RCL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JUL-21. REMARK 100 THE DEPOSITION ID IS D_1000258034. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1533 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 86404 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 11.10 REMARK 200 R MERGE (I) : 0.22500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.95300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1WUU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SEEDING INTO DROPS CONTAINING GALK REMARK 280 PROTEIN AT 8 MG/ML, 2.3M NA/K PH6.8, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 286K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 48.45050 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 103.35250 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.06300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 103.35250 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 48.45050 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 57.06300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 465 MET C 1 REMARK 465 MET D 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 79 O HOH B 501 2.06 REMARK 500 O3B ADP C 402 O HOH C 501 2.12 REMARK 500 O ALA B 252 O HOH B 502 2.13 REMARK 500 O HOH A 570 O HOH A 615 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 11 CD GLU A 11 OE1 0.080 REMARK 500 GLU A 58 CD GLU A 58 OE2 0.093 REMARK 500 GLU A 100 CD GLU A 100 OE1 0.104 REMARK 500 GLU A 235 CD GLU A 235 OE1 0.101 REMARK 500 GLU D 330 CD GLU D 330 OE1 0.069 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 97 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG A 279 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 279 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 ASP B 70 CB - CG - OD1 ANGL. DEV. = -8.7 DEGREES REMARK 500 MET B 185 CG - SD - CE ANGL. DEV. = -10.3 DEGREES REMARK 500 ARG B 240 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG B 240 NE - CZ - NH2 ANGL. DEV. = -4.4 DEGREES REMARK 500 ARG B 279 NE - CZ - NH1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG B 279 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 ARG B 342 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG C 296 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG C 297 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG C 342 CG - CD - NE ANGL. DEV. = -13.7 DEGREES REMARK 500 ARG C 342 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 140 46.12 70.81 REMARK 500 SER A 160 37.95 -151.07 REMARK 500 LEU A 213 77.26 -102.79 REMARK 500 ALA A 387 140.82 -39.28 REMARK 500 GLN B 49 31.33 71.23 REMARK 500 LEU B 92 136.31 -36.27 REMARK 500 ALA B 95 -45.41 -29.79 REMARK 500 LEU B 213 65.98 -119.13 REMARK 500 ASP B 215 111.31 -39.95 REMARK 500 ASN B 226 12.06 51.73 REMARK 500 ARG B 228 45.62 -167.98 REMARK 500 ARG B 228 134.76 175.61 REMARK 500 SER B 234 -20.36 123.06 REMARK 500 SER B 234 -168.57 -78.39 REMARK 500 SER C 140 48.11 74.04 REMARK 500 SER C 214 84.89 -155.35 REMARK 500 SER C 233 -6.28 -58.29 REMARK 500 SER C 234 -59.63 -132.47 REMARK 500 ALA C 266 45.55 -168.11 REMARK 500 GLU D 22 34.81 -77.53 REMARK 500 GLU D 23 -29.74 -163.00 REMARK 500 THR D 94 -133.90 -129.05 REMARK 500 PRO D 134 109.32 -58.06 REMARK 500 SER D 140 60.51 61.28 REMARK 500 ALA D 232 -91.25 -8.77 REMARK 500 SER D 233 52.76 -112.79 REMARK 500 SER D 271 148.60 -34.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR B 94 ALA B 95 148.54 REMARK 500 HIS B 229 SER B 230 -137.33 REMARK 500 ALA C 2 ALA C 3 124.21 REMARK 500 PRO C 35 GLY C 36 149.97 REMARK 500 SER C 79 GLU C 80 145.40 REMARK 500 SER C 233 SER C 234 -138.56 REMARK 500 ALA D 2 ALA D 3 137.81 REMARK 500 GLU D 80 GLY D 81 -140.48 REMARK 500 SER D 233 SER D 234 126.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LEU C 72 -10.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 406 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 142 OG REMARK 620 2 ADP A 402 O2B 84.8 REMARK 620 3 ADP A 402 O2A 94.0 83.3 REMARK 620 4 HOH A 520 O 93.2 172.9 90.0 REMARK 620 5 HOH A 553 O 69.4 91.8 163.1 93.9 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 407 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 369 O REMARK 620 2 GLN A 369 OE1 77.0 REMARK 620 3 TYR A 372 O 80.2 123.6 REMARK 620 4 GLY A 374 O 140.4 90.2 76.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 406 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 142 OG REMARK 620 2 ADP B 402 O2B 76.2 REMARK 620 3 ADP B 402 O1A 82.0 69.9 REMARK 620 4 HOH B 505 O 95.4 168.5 101.4 REMARK 620 5 HOH B 522 O 142.4 75.4 110.3 115.5 REMARK 620 6 HOH B 564 O 66.3 90.5 146.2 93.3 89.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 407 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN B 369 O REMARK 620 2 GLN B 369 OE1 84.1 REMARK 620 3 TYR B 372 O 81.2 127.1 REMARK 620 4 GLY B 374 O 137.9 89.2 70.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 405 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER C 142 OG REMARK 620 2 ADP C 402 O2B 63.5 REMARK 620 3 ADP C 402 O2A 80.5 63.2 REMARK 620 4 HOH C 503 O 95.7 158.3 122.4 REMARK 620 5 HOH C 564 O 88.9 72.4 134.4 102.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 406 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN C 369 O REMARK 620 2 GLN C 369 OE1 81.1 REMARK 620 3 TYR C 372 O 77.1 123.2 REMARK 620 4 GLY C 374 O 134.7 93.8 68.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 406 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER D 142 OG REMARK 620 2 ASP D 186 OD2 128.9 REMARK 620 3 HOH D 508 O 96.6 102.8 REMARK 620 4 HOH D 537 O 130.1 81.1 116.2 REMARK 620 5 HOH D 540 O 74.7 68.8 69.9 149.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA D 407 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN D 369 O REMARK 620 2 GLN D 369 OE1 84.8 REMARK 620 3 TYR D 372 O 75.7 123.8 REMARK 620 4 GLY D 374 O 138.9 80.8 80.9 REMARK 620 N 1 2 3 DBREF 7RCL A 1 392 UNP P51570 GALK1_HUMAN 1 392 DBREF 7RCL B 1 392 UNP P51570 GALK1_HUMAN 1 392 DBREF 7RCL C 1 392 UNP P51570 GALK1_HUMAN 1 392 DBREF 7RCL D 1 392 UNP P51570 GALK1_HUMAN 1 392 SEQADV 7RCL ALA A 252 UNP P51570 LYS 252 ENGINEERED MUTATION SEQADV 7RCL ALA A 253 UNP P51570 GLU 253 ENGINEERED MUTATION SEQADV 7RCL ALA B 252 UNP P51570 LYS 252 ENGINEERED MUTATION SEQADV 7RCL ALA B 253 UNP P51570 GLU 253 ENGINEERED MUTATION SEQADV 7RCL ALA C 252 UNP P51570 LYS 252 ENGINEERED MUTATION SEQADV 7RCL ALA C 253 UNP P51570 GLU 253 ENGINEERED MUTATION SEQADV 7RCL ALA D 252 UNP P51570 LYS 252 ENGINEERED MUTATION SEQADV 7RCL ALA D 253 UNP P51570 GLU 253 ENGINEERED MUTATION SEQRES 1 A 392 MET ALA ALA LEU ARG GLN PRO GLN VAL ALA GLU LEU LEU SEQRES 2 A 392 ALA GLU ALA ARG ARG ALA PHE ARG GLU GLU PHE GLY ALA SEQRES 3 A 392 GLU PRO GLU LEU ALA VAL SER ALA PRO GLY ARG VAL ASN SEQRES 4 A 392 LEU ILE GLY GLU HIS THR ASP TYR ASN GLN GLY LEU VAL SEQRES 5 A 392 LEU PRO MET ALA LEU GLU LEU MET THR VAL LEU VAL GLY SEQRES 6 A 392 SER PRO ARG LYS ASP GLY LEU VAL SER LEU LEU THR THR SEQRES 7 A 392 SER GLU GLY ALA ASP GLU PRO GLN ARG LEU GLN PHE PRO SEQRES 8 A 392 LEU PRO THR ALA GLN ARG SER LEU GLU PRO GLY THR PRO SEQRES 9 A 392 ARG TRP ALA ASN TYR VAL LYS GLY VAL ILE GLN TYR TYR SEQRES 10 A 392 PRO ALA ALA PRO LEU PRO GLY PHE SER ALA VAL VAL VAL SEQRES 11 A 392 SER SER VAL PRO LEU GLY GLY GLY LEU SER SER SER ALA SEQRES 12 A 392 SER LEU GLU VAL ALA THR TYR THR PHE LEU GLN GLN LEU SEQRES 13 A 392 CYS PRO ASP SER GLY THR ILE ALA ALA ARG ALA GLN VAL SEQRES 14 A 392 CYS GLN GLN ALA GLU HIS SER PHE ALA GLY MET PRO CYS SEQRES 15 A 392 GLY ILE MET ASP GLN PHE ILE SER LEU MET GLY GLN LYS SEQRES 16 A 392 GLY HIS ALA LEU LEU ILE ASP CYS ARG SER LEU GLU THR SEQRES 17 A 392 SER LEU VAL PRO LEU SER ASP PRO LYS LEU ALA VAL LEU SEQRES 18 A 392 ILE THR ASN SER ASN VAL ARG HIS SER LEU ALA SER SER SEQRES 19 A 392 GLU TYR PRO VAL ARG ARG ARG GLN CYS GLU GLU VAL ALA SEQRES 20 A 392 ARG ALA LEU GLY ALA ALA SER LEU ARG GLU VAL GLN LEU SEQRES 21 A 392 GLU GLU LEU GLU ALA ALA ARG ASP LEU VAL SER LYS GLU SEQRES 22 A 392 GLY PHE ARG ARG ALA ARG HIS VAL VAL GLY GLU ILE ARG SEQRES 23 A 392 ARG THR ALA GLN ALA ALA ALA ALA LEU ARG ARG GLY ASP SEQRES 24 A 392 TYR ARG ALA PHE GLY ARG LEU MET VAL GLU SER HIS ARG SEQRES 25 A 392 SER LEU ARG ASP ASP TYR GLU VAL SER CYS PRO GLU LEU SEQRES 26 A 392 ASP GLN LEU VAL GLU ALA ALA LEU ALA VAL PRO GLY VAL SEQRES 27 A 392 TYR GLY SER ARG MET THR GLY GLY GLY PHE GLY GLY CYS SEQRES 28 A 392 THR VAL THR LEU LEU GLU ALA SER ALA ALA PRO HIS ALA SEQRES 29 A 392 MET ARG HIS ILE GLN GLU HIS TYR GLY GLY THR ALA THR SEQRES 30 A 392 PHE TYR LEU SER GLN ALA ALA ASP GLY ALA LYS VAL LEU SEQRES 31 A 392 CYS LEU SEQRES 1 B 392 MET ALA ALA LEU ARG GLN PRO GLN VAL ALA GLU LEU LEU SEQRES 2 B 392 ALA GLU ALA ARG ARG ALA PHE ARG GLU GLU PHE GLY ALA SEQRES 3 B 392 GLU PRO GLU LEU ALA VAL SER ALA PRO GLY ARG VAL ASN SEQRES 4 B 392 LEU ILE GLY GLU HIS THR ASP TYR ASN GLN GLY LEU VAL SEQRES 5 B 392 LEU PRO MET ALA LEU GLU LEU MET THR VAL LEU VAL GLY SEQRES 6 B 392 SER PRO ARG LYS ASP GLY LEU VAL SER LEU LEU THR THR SEQRES 7 B 392 SER GLU GLY ALA ASP GLU PRO GLN ARG LEU GLN PHE PRO SEQRES 8 B 392 LEU PRO THR ALA GLN ARG SER LEU GLU PRO GLY THR PRO SEQRES 9 B 392 ARG TRP ALA ASN TYR VAL LYS GLY VAL ILE GLN TYR TYR SEQRES 10 B 392 PRO ALA ALA PRO LEU PRO GLY PHE SER ALA VAL VAL VAL SEQRES 11 B 392 SER SER VAL PRO LEU GLY GLY GLY LEU SER SER SER ALA SEQRES 12 B 392 SER LEU GLU VAL ALA THR TYR THR PHE LEU GLN GLN LEU SEQRES 13 B 392 CYS PRO ASP SER GLY THR ILE ALA ALA ARG ALA GLN VAL SEQRES 14 B 392 CYS GLN GLN ALA GLU HIS SER PHE ALA GLY MET PRO CYS SEQRES 15 B 392 GLY ILE MET ASP GLN PHE ILE SER LEU MET GLY GLN LYS SEQRES 16 B 392 GLY HIS ALA LEU LEU ILE ASP CYS ARG SER LEU GLU THR SEQRES 17 B 392 SER LEU VAL PRO LEU SER ASP PRO LYS LEU ALA VAL LEU SEQRES 18 B 392 ILE THR ASN SER ASN VAL ARG HIS SER LEU ALA SER SER SEQRES 19 B 392 GLU TYR PRO VAL ARG ARG ARG GLN CYS GLU GLU VAL ALA SEQRES 20 B 392 ARG ALA LEU GLY ALA ALA SER LEU ARG GLU VAL GLN LEU SEQRES 21 B 392 GLU GLU LEU GLU ALA ALA ARG ASP LEU VAL SER LYS GLU SEQRES 22 B 392 GLY PHE ARG ARG ALA ARG HIS VAL VAL GLY GLU ILE ARG SEQRES 23 B 392 ARG THR ALA GLN ALA ALA ALA ALA LEU ARG ARG GLY ASP SEQRES 24 B 392 TYR ARG ALA PHE GLY ARG LEU MET VAL GLU SER HIS ARG SEQRES 25 B 392 SER LEU ARG ASP ASP TYR GLU VAL SER CYS PRO GLU LEU SEQRES 26 B 392 ASP GLN LEU VAL GLU ALA ALA LEU ALA VAL PRO GLY VAL SEQRES 27 B 392 TYR GLY SER ARG MET THR GLY GLY GLY PHE GLY GLY CYS SEQRES 28 B 392 THR VAL THR LEU LEU GLU ALA SER ALA ALA PRO HIS ALA SEQRES 29 B 392 MET ARG HIS ILE GLN GLU HIS TYR GLY GLY THR ALA THR SEQRES 30 B 392 PHE TYR LEU SER GLN ALA ALA ASP GLY ALA LYS VAL LEU SEQRES 31 B 392 CYS LEU SEQRES 1 C 392 MET ALA ALA LEU ARG GLN PRO GLN VAL ALA GLU LEU LEU SEQRES 2 C 392 ALA GLU ALA ARG ARG ALA PHE ARG GLU GLU PHE GLY ALA SEQRES 3 C 392 GLU PRO GLU LEU ALA VAL SER ALA PRO GLY ARG VAL ASN SEQRES 4 C 392 LEU ILE GLY GLU HIS THR ASP TYR ASN GLN GLY LEU VAL SEQRES 5 C 392 LEU PRO MET ALA LEU GLU LEU MET THR VAL LEU VAL GLY SEQRES 6 C 392 SER PRO ARG LYS ASP GLY LEU VAL SER LEU LEU THR THR SEQRES 7 C 392 SER GLU GLY ALA ASP GLU PRO GLN ARG LEU GLN PHE PRO SEQRES 8 C 392 LEU PRO THR ALA GLN ARG SER LEU GLU PRO GLY THR PRO SEQRES 9 C 392 ARG TRP ALA ASN TYR VAL LYS GLY VAL ILE GLN TYR TYR SEQRES 10 C 392 PRO ALA ALA PRO LEU PRO GLY PHE SER ALA VAL VAL VAL SEQRES 11 C 392 SER SER VAL PRO LEU GLY GLY GLY LEU SER SER SER ALA SEQRES 12 C 392 SER LEU GLU VAL ALA THR TYR THR PHE LEU GLN GLN LEU SEQRES 13 C 392 CYS PRO ASP SER GLY THR ILE ALA ALA ARG ALA GLN VAL SEQRES 14 C 392 CYS GLN GLN ALA GLU HIS SER PHE ALA GLY MET PRO CYS SEQRES 15 C 392 GLY ILE MET ASP GLN PHE ILE SER LEU MET GLY GLN LYS SEQRES 16 C 392 GLY HIS ALA LEU LEU ILE ASP CYS ARG SER LEU GLU THR SEQRES 17 C 392 SER LEU VAL PRO LEU SER ASP PRO LYS LEU ALA VAL LEU SEQRES 18 C 392 ILE THR ASN SER ASN VAL ARG HIS SER LEU ALA SER SER SEQRES 19 C 392 GLU TYR PRO VAL ARG ARG ARG GLN CYS GLU GLU VAL ALA SEQRES 20 C 392 ARG ALA LEU GLY ALA ALA SER LEU ARG GLU VAL GLN LEU SEQRES 21 C 392 GLU GLU LEU GLU ALA ALA ARG ASP LEU VAL SER LYS GLU SEQRES 22 C 392 GLY PHE ARG ARG ALA ARG HIS VAL VAL GLY GLU ILE ARG SEQRES 23 C 392 ARG THR ALA GLN ALA ALA ALA ALA LEU ARG ARG GLY ASP SEQRES 24 C 392 TYR ARG ALA PHE GLY ARG LEU MET VAL GLU SER HIS ARG SEQRES 25 C 392 SER LEU ARG ASP ASP TYR GLU VAL SER CYS PRO GLU LEU SEQRES 26 C 392 ASP GLN LEU VAL GLU ALA ALA LEU ALA VAL PRO GLY VAL SEQRES 27 C 392 TYR GLY SER ARG MET THR GLY GLY GLY PHE GLY GLY CYS SEQRES 28 C 392 THR VAL THR LEU LEU GLU ALA SER ALA ALA PRO HIS ALA SEQRES 29 C 392 MET ARG HIS ILE GLN GLU HIS TYR GLY GLY THR ALA THR SEQRES 30 C 392 PHE TYR LEU SER GLN ALA ALA ASP GLY ALA LYS VAL LEU SEQRES 31 C 392 CYS LEU SEQRES 1 D 392 MET ALA ALA LEU ARG GLN PRO GLN VAL ALA GLU LEU LEU SEQRES 2 D 392 ALA GLU ALA ARG ARG ALA PHE ARG GLU GLU PHE GLY ALA SEQRES 3 D 392 GLU PRO GLU LEU ALA VAL SER ALA PRO GLY ARG VAL ASN SEQRES 4 D 392 LEU ILE GLY GLU HIS THR ASP TYR ASN GLN GLY LEU VAL SEQRES 5 D 392 LEU PRO MET ALA LEU GLU LEU MET THR VAL LEU VAL GLY SEQRES 6 D 392 SER PRO ARG LYS ASP GLY LEU VAL SER LEU LEU THR THR SEQRES 7 D 392 SER GLU GLY ALA ASP GLU PRO GLN ARG LEU GLN PHE PRO SEQRES 8 D 392 LEU PRO THR ALA GLN ARG SER LEU GLU PRO GLY THR PRO SEQRES 9 D 392 ARG TRP ALA ASN TYR VAL LYS GLY VAL ILE GLN TYR TYR SEQRES 10 D 392 PRO ALA ALA PRO LEU PRO GLY PHE SER ALA VAL VAL VAL SEQRES 11 D 392 SER SER VAL PRO LEU GLY GLY GLY LEU SER SER SER ALA SEQRES 12 D 392 SER LEU GLU VAL ALA THR TYR THR PHE LEU GLN GLN LEU SEQRES 13 D 392 CYS PRO ASP SER GLY THR ILE ALA ALA ARG ALA GLN VAL SEQRES 14 D 392 CYS GLN GLN ALA GLU HIS SER PHE ALA GLY MET PRO CYS SEQRES 15 D 392 GLY ILE MET ASP GLN PHE ILE SER LEU MET GLY GLN LYS SEQRES 16 D 392 GLY HIS ALA LEU LEU ILE ASP CYS ARG SER LEU GLU THR SEQRES 17 D 392 SER LEU VAL PRO LEU SER ASP PRO LYS LEU ALA VAL LEU SEQRES 18 D 392 ILE THR ASN SER ASN VAL ARG HIS SER LEU ALA SER SER SEQRES 19 D 392 GLU TYR PRO VAL ARG ARG ARG GLN CYS GLU GLU VAL ALA SEQRES 20 D 392 ARG ALA LEU GLY ALA ALA SER LEU ARG GLU VAL GLN LEU SEQRES 21 D 392 GLU GLU LEU GLU ALA ALA ARG ASP LEU VAL SER LYS GLU SEQRES 22 D 392 GLY PHE ARG ARG ALA ARG HIS VAL VAL GLY GLU ILE ARG SEQRES 23 D 392 ARG THR ALA GLN ALA ALA ALA ALA LEU ARG ARG GLY ASP SEQRES 24 D 392 TYR ARG ALA PHE GLY ARG LEU MET VAL GLU SER HIS ARG SEQRES 25 D 392 SER LEU ARG ASP ASP TYR GLU VAL SER CYS PRO GLU LEU SEQRES 26 D 392 ASP GLN LEU VAL GLU ALA ALA LEU ALA VAL PRO GLY VAL SEQRES 27 D 392 TYR GLY SER ARG MET THR GLY GLY GLY PHE GLY GLY CYS SEQRES 28 D 392 THR VAL THR LEU LEU GLU ALA SER ALA ALA PRO HIS ALA SEQRES 29 D 392 MET ARG HIS ILE GLN GLU HIS TYR GLY GLY THR ALA THR SEQRES 30 D 392 PHE TYR LEU SER GLN ALA ALA ASP GLY ALA LYS VAL LEU SEQRES 31 D 392 CYS LEU HET GLA A 401 12 HET ADP A 402 27 HET PO4 A 403 5 HET PO4 A 404 5 HET PO4 A 405 5 HET MG A 406 1 HET NA A 407 1 HET GLA B 401 12 HET ADP B 402 27 HET PO4 B 403 5 HET PO4 B 404 5 HET PO4 B 405 5 HET MG B 406 1 HET NA B 407 1 HET GLA C 401 12 HET ADP C 402 27 HET PO4 C 403 5 HET PO4 C 404 5 HET MG C 405 1 HET NA C 406 1 HET GLA D 401 12 HET ADP D 402 27 HET PO4 D 403 5 HET PO4 D 404 5 HET PO4 D 405 5 HET MG D 406 1 HET NA D 407 1 HETNAM GLA ALPHA-D-GALACTOPYRANOSE HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM PO4 PHOSPHATE ION HETNAM MG MAGNESIUM ION HETNAM NA SODIUM ION HETSYN GLA ALPHA-D-GALACTOSE; D-GALACTOSE; GALACTOSE; ALPHA D- HETSYN 2 GLA GALACTOSE FORMUL 5 GLA 4(C6 H12 O6) FORMUL 6 ADP 4(C10 H15 N5 O10 P2) FORMUL 7 PO4 11(O4 P 3-) FORMUL 10 MG 4(MG 2+) FORMUL 11 NA 4(NA 1+) FORMUL 32 HOH *397(H2 O) HELIX 1 AA1 GLN A 8 GLY A 25 1 18 HELIX 2 AA2 THR A 45 GLN A 49 5 5 HELIX 3 AA3 PRO A 104 TYR A 117 1 14 HELIX 4 AA4 SER A 140 CYS A 157 1 18 HELIX 5 AA5 THR A 162 GLY A 179 1 18 HELIX 6 AA6 ILE A 184 GLY A 193 1 10 HELIX 7 AA7 GLU A 235 LEU A 250 1 16 HELIX 8 AA8 SER A 254 VAL A 258 5 5 HELIX 9 AA9 GLN A 259 ALA A 266 1 8 HELIX 10 AB1 ARG A 267 VAL A 270 5 4 HELIX 11 AB2 SER A 271 ARG A 297 1 27 HELIX 12 AB3 ASP A 299 ASP A 317 1 19 HELIX 13 AB4 CYS A 322 ALA A 334 1 13 HELIX 14 AB5 ALA A 360 HIS A 371 1 12 HELIX 15 AB6 GLN B 8 GLY B 25 1 18 HELIX 16 AB7 THR B 45 GLN B 49 5 5 HELIX 17 AB8 PRO B 104 TYR B 117 1 14 HELIX 18 AB9 SER B 140 CYS B 157 1 18 HELIX 19 AC1 THR B 162 PHE B 177 1 16 HELIX 20 AC2 ILE B 184 GLY B 193 1 10 HELIX 21 AC3 LEU B 231 LEU B 250 1 20 HELIX 22 AC4 SER B 254 VAL B 258 5 5 HELIX 23 AC5 GLN B 259 ALA B 265 1 7 HELIX 24 AC6 ALA B 266 VAL B 270 5 5 HELIX 25 AC7 SER B 271 ARG B 297 1 27 HELIX 26 AC8 ASP B 299 ASP B 317 1 19 HELIX 27 AC9 CYS B 322 VAL B 335 1 14 HELIX 28 AD1 ALA B 360 HIS B 371 1 12 HELIX 29 AD2 GLN C 8 GLY C 25 1 18 HELIX 30 AD3 THR C 45 GLN C 49 5 5 HELIX 31 AD4 PRO C 104 TYR C 117 1 14 HELIX 32 AD5 SER C 140 CYS C 157 1 18 HELIX 33 AD6 THR C 162 PHE C 177 1 16 HELIX 34 AD7 ILE C 184 GLY C 193 1 10 HELIX 35 AD8 LEU C 231 LEU C 250 1 20 HELIX 36 AD9 SER C 254 VAL C 258 5 5 HELIX 37 AE1 GLN C 259 ALA C 265 1 7 HELIX 38 AE2 ALA C 266 VAL C 270 5 5 HELIX 39 AE3 SER C 271 GLY C 298 1 28 HELIX 40 AE4 ASP C 299 ASP C 317 1 19 HELIX 41 AE5 CYS C 322 VAL C 335 1 14 HELIX 42 AE6 ALA C 360 HIS C 371 1 12 HELIX 43 AE7 GLN D 8 GLY D 25 1 18 HELIX 44 AE8 THR D 45 GLN D 49 5 5 HELIX 45 AE9 ALA D 107 TYR D 117 1 11 HELIX 46 AF1 SER D 140 CYS D 157 1 18 HELIX 47 AF2 THR D 162 GLY D 179 1 18 HELIX 48 AF3 ILE D 184 GLY D 193 1 10 HELIX 49 AF4 LEU D 231 LEU D 250 1 20 HELIX 50 AF5 SER D 254 VAL D 258 5 5 HELIX 51 AF6 GLN D 259 ALA D 266 1 8 HELIX 52 AF7 ARG D 267 VAL D 270 5 4 HELIX 53 AF8 SER D 271 GLY D 298 1 28 HELIX 54 AF9 ASP D 299 ASP D 317 1 19 HELIX 55 AG1 CYS D 322 VAL D 335 1 14 HELIX 56 AG2 ALA D 360 TYR D 372 1 13 SHEET 1 AA1 6 ARG A 87 PRO A 91 0 SHEET 2 AA1 6 LEU A 72 THR A 77 -1 N VAL A 73 O PHE A 90 SHEET 3 AA1 6 PHE A 125 SER A 131 1 O PHE A 125 N SER A 74 SHEET 4 AA1 6 PRO A 54 PRO A 67 -1 N VAL A 62 O VAL A 130 SHEET 5 AA1 6 LEU A 30 ASN A 39 -1 N LEU A 30 O GLY A 65 SHEET 6 AA1 6 LYS A 388 LEU A 390 -1 O LEU A 390 N ALA A 31 SHEET 1 AA2 9 LEU A 51 VAL A 52 0 SHEET 2 AA2 9 HIS A 197 ASP A 202 -1 O ILE A 201 N VAL A 52 SHEET 3 AA2 9 THR A 208 PRO A 212 -1 O VAL A 211 N ALA A 198 SHEET 4 AA2 9 THR C 208 PRO C 212 -1 O THR C 208 N LEU A 210 SHEET 5 AA2 9 HIS C 197 ASP C 202 -1 N LEU C 200 O SER C 209 SHEET 6 AA2 9 LEU C 51 PRO C 67 -1 N PRO C 54 O LEU C 199 SHEET 7 AA2 9 PHE C 125 SER C 131 -1 O VAL C 130 N VAL C 62 SHEET 8 AA2 9 LEU C 72 THR C 77 1 N SER C 74 O ALA C 127 SHEET 9 AA2 9 ARG C 87 PRO C 91 -1 O LEU C 88 N LEU C 75 SHEET 1 AA3 8 LEU A 51 VAL A 52 0 SHEET 2 AA3 8 HIS A 197 ASP A 202 -1 O ILE A 201 N VAL A 52 SHEET 3 AA3 8 THR A 208 PRO A 212 -1 O VAL A 211 N ALA A 198 SHEET 4 AA3 8 THR C 208 PRO C 212 -1 O THR C 208 N LEU A 210 SHEET 5 AA3 8 HIS C 197 ASP C 202 -1 N LEU C 200 O SER C 209 SHEET 6 AA3 8 LEU C 51 PRO C 67 -1 N PRO C 54 O LEU C 199 SHEET 7 AA3 8 LEU C 30 ILE C 41 -1 N LEU C 30 O GLY C 65 SHEET 8 AA3 8 LYS C 388 LEU C 390 -1 O LYS C 388 N SER C 33 SHEET 1 AA4 4 VAL A 338 MET A 343 0 SHEET 2 AA4 4 CYS A 351 GLU A 357 -1 O VAL A 353 N ARG A 342 SHEET 3 AA4 4 LEU A 218 ASN A 224 -1 N ALA A 219 O LEU A 356 SHEET 4 AA4 4 THR A 377 SER A 381 -1 O TYR A 379 N ILE A 222 SHEET 1 AA5 6 ARG B 87 PRO B 91 0 SHEET 2 AA5 6 LEU B 72 THR B 77 -1 N VAL B 73 O PHE B 90 SHEET 3 AA5 6 PHE B 125 SER B 131 1 O VAL B 129 N LEU B 76 SHEET 4 AA5 6 PRO B 54 PRO B 67 -1 N VAL B 62 O VAL B 130 SHEET 5 AA5 6 LEU B 30 ASN B 39 -1 N LEU B 30 O GLY B 65 SHEET 6 AA5 6 LYS B 388 LEU B 390 -1 O LEU B 390 N ALA B 31 SHEET 1 AA6 6 LEU B 51 VAL B 52 0 SHEET 2 AA6 6 HIS B 197 ASP B 202 -1 O ILE B 201 N VAL B 52 SHEET 3 AA6 6 THR B 208 PRO B 212 -1 O VAL B 211 N ALA B 198 SHEET 4 AA6 6 THR D 208 PRO D 212 -1 O THR D 208 N LEU B 210 SHEET 5 AA6 6 HIS D 197 ASP D 202 -1 N LEU D 200 O SER D 209 SHEET 6 AA6 6 LEU D 51 VAL D 52 -1 N VAL D 52 O ILE D 201 SHEET 1 AA7 4 VAL B 338 MET B 343 0 SHEET 2 AA7 4 CYS B 351 GLU B 357 -1 O VAL B 353 N ARG B 342 SHEET 3 AA7 4 LEU B 218 ASN B 224 -1 N LEU B 221 O THR B 354 SHEET 4 AA7 4 THR B 377 SER B 381 -1 O TYR B 379 N ILE B 222 SHEET 1 AA8 4 VAL C 338 MET C 343 0 SHEET 2 AA8 4 GLY C 349 GLU C 357 -1 O VAL C 353 N ARG C 342 SHEET 3 AA8 4 LEU C 218 ARG C 228 -1 N LEU C 221 O THR C 354 SHEET 4 AA8 4 THR C 377 SER C 381 -1 O TYR C 379 N ILE C 222 SHEET 1 AA9 6 ARG D 87 PRO D 91 0 SHEET 2 AA9 6 LEU D 72 THR D 77 -1 N VAL D 73 O PHE D 90 SHEET 3 AA9 6 GLY D 124 SER D 131 1 O PHE D 125 N SER D 74 SHEET 4 AA9 6 PRO D 54 ARG D 68 -1 N VAL D 64 O VAL D 128 SHEET 5 AA9 6 LEU D 30 ASN D 39 -1 N ALA D 34 O THR D 61 SHEET 6 AA9 6 LYS D 388 LEU D 390 -1 O LEU D 390 N ALA D 31 SHEET 1 AB1 4 VAL D 338 MET D 343 0 SHEET 2 AB1 4 GLY D 349 GLU D 357 -1 O LEU D 355 N TYR D 339 SHEET 3 AB1 4 LEU D 218 ARG D 228 -1 N LEU D 221 O THR D 354 SHEET 4 AB1 4 THR D 377 SER D 381 -1 O THR D 377 N ASN D 224 SSBOND 1 CYS A 391 CYS C 391 1555 1555 2.13 SSBOND 2 CYS B 391 CYS D 391 1555 1555 2.13 LINK OG SER A 142 MG MG A 406 1555 1555 2.54 LINK O GLN A 369 NA NA A 407 1555 1555 2.68 LINK OE1 GLN A 369 NA NA A 407 1555 1555 2.52 LINK O TYR A 372 NA NA A 407 1555 1555 2.50 LINK O GLY A 374 NA NA A 407 1555 1555 2.41 LINK O2B ADP A 402 MG MG A 406 1555 1555 2.46 LINK O2A ADP A 402 MG MG A 406 1555 1555 2.40 LINK MG MG A 406 O HOH A 520 1555 1555 2.66 LINK MG MG A 406 O HOH A 553 1555 1555 2.59 LINK OG SER B 142 MG MG B 406 1555 1555 2.68 LINK O GLN B 369 NA NA B 407 1555 1555 2.46 LINK OE1 GLN B 369 NA NA B 407 1555 1555 2.51 LINK O TYR B 372 NA NA B 407 1555 1555 2.51 LINK O GLY B 374 NA NA B 407 1555 1555 2.52 LINK O2B ADP B 402 MG MG B 406 1555 1555 2.63 LINK O1A ADP B 402 MG MG B 406 1555 1555 2.64 LINK MG MG B 406 O HOH B 505 1555 1555 2.32 LINK MG MG B 406 O HOH B 522 1555 1555 2.85 LINK MG MG B 406 O HOH B 564 1555 1555 2.63 LINK OG SER C 142 MG MG C 405 1555 1555 2.87 LINK O GLN C 369 NA NA C 406 1555 1555 2.56 LINK OE1 GLN C 369 NA NA C 406 1555 1555 3.02 LINK O TYR C 372 NA NA C 406 1555 1555 2.73 LINK O GLY C 374 NA NA C 406 1555 1555 2.66 LINK O2B ADP C 402 MG MG C 405 1555 1555 2.95 LINK O2A ADP C 402 MG MG C 405 1555 1555 2.62 LINK MG MG C 405 O HOH C 503 1555 1555 2.45 LINK MG MG C 405 O HOH C 564 1555 1555 1.73 LINK OG SER D 142 MG MG D 406 1555 1555 2.64 LINK OD2 ASP D 186 MG MG D 406 1555 1555 2.95 LINK O GLN D 369 NA NA D 407 1555 1555 2.70 LINK OE1 GLN D 369 NA NA D 407 1555 1555 2.72 LINK O TYR D 372 NA NA D 407 1555 1555 2.76 LINK O GLY D 374 NA NA D 407 1555 1555 2.28 LINK MG MG D 406 O HOH D 508 1555 1555 2.86 LINK MG MG D 406 O HOH D 537 1555 1555 2.58 LINK MG MG D 406 O HOH D 540 1555 1555 2.82 CISPEP 1 GLU A 84 PRO A 85 0 -0.04 CISPEP 2 THR A 103 PRO A 104 0 -2.84 CISPEP 3 ALA A 120 PRO A 121 0 3.62 CISPEP 4 GLU B 84 PRO B 85 0 5.37 CISPEP 5 THR B 103 PRO B 104 0 -6.19 CISPEP 6 ALA B 120 PRO B 121 0 -1.27 CISPEP 7 GLU C 84 PRO C 85 0 4.94 CISPEP 8 THR C 103 PRO C 104 0 7.03 CISPEP 9 ALA C 120 PRO C 121 0 -4.25 CISPEP 10 GLU D 84 PRO D 85 0 3.39 CISPEP 11 THR D 103 PRO D 104 0 -2.58 CISPEP 12 ALA D 120 PRO D 121 0 5.60 CRYST1 96.901 114.126 206.705 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010320 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008762 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004838 0.00000