HEADER GENE REGULATION 13-JUL-21 7REK TITLE CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN (BD1) OF HUMAN BRD4 IN TITLE 2 COMPLEX WITH DUAL BRD4-JAK2 INHIBITOR MA9-086 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BROMODOMAIN-CONTAINING PROTEIN 4; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: BROMO 1 DOMAIN RESIDUES 44-168; COMPND 5 SYNONYM: PROTEIN HUNK1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BRD4, HUNK1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BET, JAK2, DUAL BRD-KINASE INHIBITOR, GENE REGULATION EXPDTA X-RAY DIFFRACTION AUTHOR M.R.KARIM,E.SCHONBRUNN REVDAT 2 18-OCT-23 7REK 1 REMARK REVDAT 1 21-JUL-21 7REK 0 JRNL AUTH M.R.KARIM,E.SCHONBRUNN JRNL TITL CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN (BD1) OF HUMAN JRNL TITL 2 BRD4 IN COMPLEX WITH DUAL BRD4-JAK2 INHIBITOR MA9-086 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4085 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.3 REMARK 3 NUMBER OF REFLECTIONS : 72082 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1298 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.6100 - 2.5000 0.96 8461 156 0.1569 0.1834 REMARK 3 2 2.5000 - 1.9800 0.95 8370 153 0.1612 0.1690 REMARK 3 3 1.9800 - 1.7300 0.93 8213 151 0.1600 0.2112 REMARK 3 4 1.7300 - 1.5700 0.93 8208 150 0.1582 0.1852 REMARK 3 5 1.5700 - 1.4600 0.92 8084 148 0.1678 0.1916 REMARK 3 6 1.4600 - 1.3700 0.91 8011 147 0.1844 0.2046 REMARK 3 7 1.3700 - 1.3000 0.90 7940 146 0.1934 0.2383 REMARK 3 8 1.3000 - 1.2500 0.88 7739 141 0.2296 0.2454 REMARK 3 9 1.2500 - 1.2000 0.65 5758 106 0.2590 0.2700 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.720 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.69 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 43 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.4775 -15.9117 -18.0608 REMARK 3 T TENSOR REMARK 3 T11: 0.2045 T22: 0.1041 REMARK 3 T33: 0.1967 T12: 0.0202 REMARK 3 T13: 0.0040 T23: -0.0170 REMARK 3 L TENSOR REMARK 3 L11: 6.1274 L22: 6.1523 REMARK 3 L33: 9.2916 L12: 0.6162 REMARK 3 L13: -0.9490 L23: -1.6816 REMARK 3 S TENSOR REMARK 3 S11: -0.0802 S12: -0.0166 S13: -0.3605 REMARK 3 S21: 0.0927 S22: 0.1953 S23: -0.1933 REMARK 3 S31: 0.5550 S32: -0.0259 S33: 0.1186 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 48 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.1418 -0.8118 -28.0566 REMARK 3 T TENSOR REMARK 3 T11: 0.2656 T22: 0.2592 REMARK 3 T33: 0.2122 T12: 0.0594 REMARK 3 T13: 0.0382 T23: 0.0314 REMARK 3 L TENSOR REMARK 3 L11: 1.0342 L22: 3.8804 REMARK 3 L33: 2.4014 L12: 2.0072 REMARK 3 L13: -1.5847 L23: -3.0634 REMARK 3 S TENSOR REMARK 3 S11: -0.0439 S12: 0.0010 S13: -0.2046 REMARK 3 S21: -0.6782 S22: -0.3672 S23: -0.3092 REMARK 3 S31: 0.3657 S32: 0.3688 S33: 0.4201 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 61 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0892 9.8709 -17.8677 REMARK 3 T TENSOR REMARK 3 T11: 0.1955 T22: 0.1938 REMARK 3 T33: 0.1456 T12: -0.0222 REMARK 3 T13: -0.0083 T23: 0.0222 REMARK 3 L TENSOR REMARK 3 L11: 5.7453 L22: 7.5092 REMARK 3 L33: 2.0382 L12: 0.8202 REMARK 3 L13: -0.9009 L23: 1.3070 REMARK 3 S TENSOR REMARK 3 S11: 0.0051 S12: 0.0528 S13: 0.2269 REMARK 3 S21: -0.0271 S22: -0.0455 S23: -0.3297 REMARK 3 S31: -0.5431 S32: 0.4949 S33: 0.0956 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3725 -4.6662 -7.2993 REMARK 3 T TENSOR REMARK 3 T11: 0.1339 T22: 0.1323 REMARK 3 T33: 0.1289 T12: 0.0186 REMARK 3 T13: 0.0041 T23: 0.0131 REMARK 3 L TENSOR REMARK 3 L11: 1.2968 L22: 1.2220 REMARK 3 L33: 2.3122 L12: 0.2681 REMARK 3 L13: 0.3912 L23: 0.8287 REMARK 3 S TENSOR REMARK 3 S11: 0.0348 S12: -0.0847 S13: -0.1143 REMARK 3 S21: 0.1262 S22: -0.0275 S23: -0.0036 REMARK 3 S31: 0.1968 S32: 0.0170 S33: 0.0365 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 97 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.4581 -3.6515 -19.8366 REMARK 3 T TENSOR REMARK 3 T11: 0.1229 T22: 0.1196 REMARK 3 T33: 0.1357 T12: 0.0159 REMARK 3 T13: 0.0036 T23: -0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.3232 L22: 1.0334 REMARK 3 L33: 1.5318 L12: -0.0134 REMARK 3 L13: -0.3003 L23: -0.2398 REMARK 3 S TENSOR REMARK 3 S11: -0.0134 S12: 0.0336 S13: 0.0034 REMARK 3 S21: -0.0582 S22: -0.0779 S23: -0.0164 REMARK 3 S31: 0.0694 S32: 0.0759 S33: 0.1102 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 122 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.2357 1.5034 -17.1855 REMARK 3 T TENSOR REMARK 3 T11: 0.1342 T22: 0.1255 REMARK 3 T33: 0.1385 T12: 0.0180 REMARK 3 T13: -0.0070 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 4.6324 L22: 1.7393 REMARK 3 L33: 1.9348 L12: 2.4346 REMARK 3 L13: -2.3244 L23: -0.9180 REMARK 3 S TENSOR REMARK 3 S11: -0.0313 S12: 0.0900 S13: 0.0918 REMARK 3 S21: -0.0275 S22: 0.0143 S23: 0.0175 REMARK 3 S31: -0.0333 S32: -0.0144 S33: -0.0125 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 140 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.8685 7.6053 -9.9463 REMARK 3 T TENSOR REMARK 3 T11: 0.1211 T22: 0.1206 REMARK 3 T33: 0.1303 T12: 0.0254 REMARK 3 T13: -0.0132 T23: -0.0145 REMARK 3 L TENSOR REMARK 3 L11: 3.4767 L22: 2.7878 REMARK 3 L33: 2.6190 L12: 2.0683 REMARK 3 L13: -1.7324 L23: -1.3176 REMARK 3 S TENSOR REMARK 3 S11: 0.0815 S12: 0.0260 S13: 0.2326 REMARK 3 S21: 0.1007 S22: -0.0336 S23: 0.1265 REMARK 3 S31: -0.2356 S32: -0.0886 S33: -0.0562 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 43 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.5573 8.9185 -33.0388 REMARK 3 T TENSOR REMARK 3 T11: 0.1795 T22: 0.1232 REMARK 3 T33: 0.1337 T12: -0.0306 REMARK 3 T13: 0.0057 T23: 0.0225 REMARK 3 L TENSOR REMARK 3 L11: 5.9663 L22: 9.2675 REMARK 3 L33: 3.9823 L12: -4.2952 REMARK 3 L13: -2.6350 L23: 2.5423 REMARK 3 S TENSOR REMARK 3 S11: -0.3335 S12: 0.0300 S13: -0.0497 REMARK 3 S21: 0.8623 S22: 0.0991 S23: 0.2527 REMARK 3 S31: 0.5213 S32: -0.2172 S33: 0.2761 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 53 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.3727 26.0697 -36.1199 REMARK 3 T TENSOR REMARK 3 T11: 0.1484 T22: 0.1543 REMARK 3 T33: 0.1620 T12: -0.0122 REMARK 3 T13: 0.0028 T23: -0.0274 REMARK 3 L TENSOR REMARK 3 L11: 1.3936 L22: 0.8671 REMARK 3 L33: 4.6185 L12: -0.4140 REMARK 3 L13: -1.2403 L23: 1.9963 REMARK 3 S TENSOR REMARK 3 S11: 0.0450 S12: -0.0021 S13: 0.0307 REMARK 3 S21: 0.1062 S22: -0.1902 S23: 0.0814 REMARK 3 S31: 0.0024 S32: -0.4410 S33: 0.1112 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 77 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.2743 11.1800 -44.0823 REMARK 3 T TENSOR REMARK 3 T11: 0.1408 T22: 0.1323 REMARK 3 T33: 0.1508 T12: -0.0044 REMARK 3 T13: 0.0110 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 1.3158 L22: 1.4646 REMARK 3 L33: 2.2341 L12: -0.0663 REMARK 3 L13: 0.0037 L23: -0.4391 REMARK 3 S TENSOR REMARK 3 S11: -0.0193 S12: -0.0164 S13: -0.1239 REMARK 3 S21: -0.0287 S22: -0.0137 S23: -0.0010 REMARK 3 S31: 0.2133 S32: 0.0178 S33: 0.0361 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 107 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.2502 20.2465 -33.3537 REMARK 3 T TENSOR REMARK 3 T11: 0.1351 T22: 0.1518 REMARK 3 T33: 0.1513 T12: -0.0157 REMARK 3 T13: 0.0122 T23: -0.0058 REMARK 3 L TENSOR REMARK 3 L11: 0.8800 L22: 3.5915 REMARK 3 L33: 5.8000 L12: -0.7122 REMARK 3 L13: -0.0570 L23: 3.6125 REMARK 3 S TENSOR REMARK 3 S11: 0.0586 S12: 0.0397 S13: 0.0503 REMARK 3 S21: 0.1796 S22: -0.2126 S23: 0.1928 REMARK 3 S31: 0.2086 S32: -0.3388 S33: 0.1170 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 122 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.5619 21.6907 -37.5658 REMARK 3 T TENSOR REMARK 3 T11: 0.1398 T22: 0.1282 REMARK 3 T33: 0.1486 T12: -0.0169 REMARK 3 T13: 0.0022 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 4.7256 L22: 1.9256 REMARK 3 L33: 1.7077 L12: -2.6818 REMARK 3 L13: -2.2440 L23: 1.0995 REMARK 3 S TENSOR REMARK 3 S11: -0.0200 S12: -0.1346 S13: 0.1296 REMARK 3 S21: 0.0126 S22: 0.0482 S23: 0.0031 REMARK 3 S31: -0.0390 S32: 0.0156 S33: -0.0466 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 140 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.6271 28.1283 -44.1059 REMARK 3 T TENSOR REMARK 3 T11: 0.1563 T22: 0.1305 REMARK 3 T33: 0.1720 T12: -0.0198 REMARK 3 T13: -0.0005 T23: -0.0022 REMARK 3 L TENSOR REMARK 3 L11: 1.2947 L22: 0.6471 REMARK 3 L33: 2.2611 L12: -0.3008 REMARK 3 L13: -0.8762 L23: 0.3837 REMARK 3 S TENSOR REMARK 3 S11: 0.1486 S12: 0.0421 S13: 0.1848 REMARK 3 S21: -0.0606 S22: -0.0903 S23: -0.0144 REMARK 3 S31: -0.2632 S32: -0.0623 S33: -0.1283 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : (CHAIN B AND RESID 43 THROUGH 167) REMARK 3 ATOM PAIRS NUMBER : 750 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7REK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUL-21. REMARK 100 THE DEPOSITION ID IS D_1000256926. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72084 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 39.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.2 REMARK 200 DATA REDUNDANCY : 1.842 REMARK 200 R MERGE (I) : 0.03000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.8100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 57.8 REMARK 200 DATA REDUNDANCY IN SHELL : 1.82 REMARK 200 R MERGE FOR SHELL (I) : 0.21700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.770 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7K6H REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULPHATE, 0.15 M SODIUM REMARK 280 CHLORIDE, 0.1 M TRIS (PH 8.5), 25 % W/V PEG 3,350, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 168 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 43 CG SD CE REMARK 470 MET B 43 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 359 O HOH A 379 2.03 REMARK 500 O HOH B 394 O HOH B 420 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 375 O HOH B 421 1556 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 94 73.65 -117.70 REMARK 500 ASN A 140 -165.43 -101.52 REMARK 500 LEU B 94 75.18 -119.26 REMARK 500 ASN B 140 -166.40 -101.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 437 DISTANCE = 5.96 ANGSTROMS DBREF 7REK A 44 168 UNP O60885 BRD4_HUMAN 44 168 DBREF 7REK B 44 168 UNP O60885 BRD4_HUMAN 44 168 SEQADV 7REK MET A 43 UNP O60885 INITIATING METHIONINE SEQADV 7REK MET B 43 UNP O60885 INITIATING METHIONINE SEQRES 1 A 126 MET ASN PRO PRO PRO PRO GLU THR SER ASN PRO ASN LYS SEQRES 2 A 126 PRO LYS ARG GLN THR ASN GLN LEU GLN TYR LEU LEU ARG SEQRES 3 A 126 VAL VAL LEU LYS THR LEU TRP LYS HIS GLN PHE ALA TRP SEQRES 4 A 126 PRO PHE GLN GLN PRO VAL ASP ALA VAL LYS LEU ASN LEU SEQRES 5 A 126 PRO ASP TYR TYR LYS ILE ILE LYS THR PRO MET ASP MET SEQRES 6 A 126 GLY THR ILE LYS LYS ARG LEU GLU ASN ASN TYR TYR TRP SEQRES 7 A 126 ASN ALA GLN GLU CYS ILE GLN ASP PHE ASN THR MET PHE SEQRES 8 A 126 THR ASN CYS TYR ILE TYR ASN LYS PRO GLY ASP ASP ILE SEQRES 9 A 126 VAL LEU MET ALA GLU ALA LEU GLU LYS LEU PHE LEU GLN SEQRES 10 A 126 LYS ILE ASN GLU LEU PRO THR GLU GLU SEQRES 1 B 126 MET ASN PRO PRO PRO PRO GLU THR SER ASN PRO ASN LYS SEQRES 2 B 126 PRO LYS ARG GLN THR ASN GLN LEU GLN TYR LEU LEU ARG SEQRES 3 B 126 VAL VAL LEU LYS THR LEU TRP LYS HIS GLN PHE ALA TRP SEQRES 4 B 126 PRO PHE GLN GLN PRO VAL ASP ALA VAL LYS LEU ASN LEU SEQRES 5 B 126 PRO ASP TYR TYR LYS ILE ILE LYS THR PRO MET ASP MET SEQRES 6 B 126 GLY THR ILE LYS LYS ARG LEU GLU ASN ASN TYR TYR TRP SEQRES 7 B 126 ASN ALA GLN GLU CYS ILE GLN ASP PHE ASN THR MET PHE SEQRES 8 B 126 THR ASN CYS TYR ILE TYR ASN LYS PRO GLY ASP ASP ILE SEQRES 9 B 126 VAL LEU MET ALA GLU ALA LEU GLU LYS LEU PHE LEU GLN SEQRES 10 B 126 LYS ILE ASN GLU LEU PRO THR GLU GLU HET R6S A 201 39 HET EDO A 202 4 HET EDO A 203 4 HET EDO A 204 4 HET R6S B 201 39 HET EDO B 202 4 HET EDO B 203 4 HET EDO B 204 4 HETNAM R6S N~4~-[1-(TERT-BUTYLSULFONYL)-2,3-DIHYDRO-1H-INDOL-6- HETNAM 2 R6S YL]-N~2~-[3-FLUORO-4-(1-METHYLPIPERIDIN-4-YL)PHENYL]- HETNAM 3 R6S 5-METHYLPYRIMIDINE-2,4-DIAMINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 R6S 2(C29 H37 F N6 O2 S) FORMUL 4 EDO 6(C2 H6 O2) FORMUL 11 HOH *280(H2 O) HELIX 1 AA1 THR A 60 VAL A 69 1 10 HELIX 2 AA2 VAL A 69 HIS A 77 1 9 HELIX 3 AA3 ALA A 80 GLN A 84 5 5 HELIX 4 AA4 ASP A 96 ILE A 101 1 6 HELIX 5 AA5 ASP A 106 ASN A 116 1 11 HELIX 6 AA6 ASN A 121 ASN A 140 1 20 HELIX 7 AA7 ASP A 144 ASN A 162 1 19 HELIX 8 AA8 THR B 60 VAL B 69 1 10 HELIX 9 AA9 VAL B 69 HIS B 77 1 9 HELIX 10 AB1 ALA B 80 GLN B 84 5 5 HELIX 11 AB2 ASP B 96 ILE B 101 1 6 HELIX 12 AB3 ASP B 106 ASN B 116 1 11 HELIX 13 AB4 ASN B 121 ASN B 140 1 20 HELIX 14 AB5 ASP B 144 ASN B 162 1 19 CRYST1 30.300 40.280 57.300 100.11 104.40 90.13 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.033003 0.000075 0.008631 0.00000 SCALE2 0.000000 0.024826 0.004589 0.00000 SCALE3 0.000000 0.000000 0.018323 0.00000