HEADER VIRAL PROTEIN/INHIBITOR 20-JUL-21 7RJ4 TITLE CO-CRYSTAL STRUCTURE OF LENACAPAVIR BOUND TO N74D MUTANT OF DISULFIDE TITLE 2 STABILIZED HIV-1 CA HEXAMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN P24; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 3 ORGANISM_TAXID: 11676; SOURCE 4 GENE: GAG; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS INHIBITOR, VIRAL PROTEIN, VIRAL PROTEIN-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.M.BESTER,M.KVARATSKHELIA REVDAT 7 25-DEC-24 7RJ4 1 COMPND HETNAM HETSYN REVDAT 6 13-NOV-24 7RJ4 1 REMARK REVDAT 5 18-OCT-23 7RJ4 1 REMARK REVDAT 4 09-NOV-22 7RJ4 1 JRNL HETSYN REVDAT 3 19-OCT-22 7RJ4 1 JRNL REVDAT 2 17-AUG-22 7RJ4 1 REMARK REVDAT 1 27-JUL-22 7RJ4 0 JRNL AUTH S.M.BESTER,D.ADU-AMPRATWUM,A.S.ANNAMALAI,G.WEI,L.BRIGANTI, JRNL AUTH 2 B.C.MURPHY,R.HANEY,J.R.FUCHS,M.KVARATSKHELIA JRNL TITL STRUCTURAL AND MECHANISTIC BASES OF VIRAL RESISTANCE TO JRNL TITL 2 HIV-1 CAPSID INHIBITOR LENACAPAVIR. JRNL REF MBIO V. 13 80422 2022 JRNL REFN ESSN 2150-7511 JRNL PMID 36190128 JRNL DOI 10.1128/MBIO.01804-22 REMARK 2 REMARK 2 RESOLUTION. 3.32 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.32 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.32 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 11988 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.280 REMARK 3 R VALUE (WORKING SET) : 0.278 REMARK 3 FREE R VALUE : 0.331 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 586 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.3200 - 5.2700 1.00 3006 169 0.2625 0.3230 REMARK 3 2 5.2700 - 4.1800 1.00 2940 166 0.2665 0.3056 REMARK 3 3 4.1800 - 3.6500 0.99 2930 126 0.2819 0.3467 REMARK 3 4 3.6500 - 3.3200 0.87 2526 125 0.3381 0.3906 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.526 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 39.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 82.93 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 84.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5413 REMARK 3 ANGLE : 0.704 7426 REMARK 3 CHIRALITY : 0.047 808 REMARK 3 PLANARITY : 0.006 947 REMARK 3 DIHEDRAL : 16.862 2004 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 96.4155 -65.0590 -6.3108 REMARK 3 T TENSOR REMARK 3 T11: 0.7188 T22: 0.5301 REMARK 3 T33: 0.6965 T12: -0.0789 REMARK 3 T13: -0.0793 T23: 0.0667 REMARK 3 L TENSOR REMARK 3 L11: 1.3418 L22: 3.0758 REMARK 3 L33: 3.0528 L12: -0.6683 REMARK 3 L13: 0.3961 L23: 0.2860 REMARK 3 S TENSOR REMARK 3 S11: -0.0403 S12: 0.2266 S13: 0.0770 REMARK 3 S21: -0.4599 S22: 0.0148 S23: 0.0044 REMARK 3 S31: 0.2316 S32: 0.1677 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 219 ) REMARK 3 ORIGIN FOR THE GROUP (A): 74.8240 -84.1219 15.3896 REMARK 3 T TENSOR REMARK 3 T11: 0.6156 T22: 0.7043 REMARK 3 T33: 0.8362 T12: 0.0065 REMARK 3 T13: -0.0782 T23: 0.0283 REMARK 3 L TENSOR REMARK 3 L11: 0.9487 L22: 0.5644 REMARK 3 L33: 2.0666 L12: 0.2328 REMARK 3 L13: -0.4576 L23: -0.5066 REMARK 3 S TENSOR REMARK 3 S11: -0.8585 S12: -0.3089 S13: -0.0301 REMARK 3 S21: -0.4011 S22: 0.3697 S23: 0.4069 REMARK 3 S31: 0.3517 S32: -0.0953 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.6733 -26.6041 -6.3111 REMARK 3 T TENSOR REMARK 3 T11: 0.5396 T22: 0.6491 REMARK 3 T33: 0.6821 T12: 0.0429 REMARK 3 T13: 0.0263 T23: -0.0292 REMARK 3 L TENSOR REMARK 3 L11: 1.4047 L22: 1.7116 REMARK 3 L33: 1.1468 L12: -1.4207 REMARK 3 L13: -0.6083 L23: 0.9830 REMARK 3 S TENSOR REMARK 3 S11: 0.0967 S12: 0.1457 S13: 0.1464 REMARK 3 S21: -0.5270 S22: -0.1935 S23: -0.0212 REMARK 3 S31: 0.0481 S32: -0.3957 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 145 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): 80.2349 -12.3412 18.4033 REMARK 3 T TENSOR REMARK 3 T11: 0.7306 T22: 0.8379 REMARK 3 T33: 1.2686 T12: -0.1310 REMARK 3 T13: -0.1768 T23: -0.0796 REMARK 3 L TENSOR REMARK 3 L11: 0.5196 L22: 1.7742 REMARK 3 L33: 0.5446 L12: 0.7217 REMARK 3 L13: -0.3122 L23: 0.2204 REMARK 3 S TENSOR REMARK 3 S11: 0.7016 S12: -0.8726 S13: -0.6547 REMARK 3 S21: 1.8476 S22: -0.8597 S23: 0.4800 REMARK 3 S31: 0.9575 S32: -0.2521 S33: 0.0320 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 175 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 88.1051 -4.8568 14.3595 REMARK 3 T TENSOR REMARK 3 T11: 1.1112 T22: 0.5164 REMARK 3 T33: 0.9966 T12: -0.2442 REMARK 3 T13: 0.0512 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.3949 L22: 0.4560 REMARK 3 L33: 1.2452 L12: -0.1644 REMARK 3 L13: -0.5549 L23: 0.7081 REMARK 3 S TENSOR REMARK 3 S11: 0.2771 S12: 0.7406 S13: 0.3857 REMARK 3 S21: -0.4751 S22: 0.0408 S23: 0.1670 REMARK 3 S31: -1.9290 S32: 0.6330 S33: 0.0031 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.2495 -8.2539 42.8092 REMARK 3 T TENSOR REMARK 3 T11: 0.3441 T22: 0.5680 REMARK 3 T33: 1.1604 T12: 0.2142 REMARK 3 T13: -0.2626 T23: -0.0136 REMARK 3 L TENSOR REMARK 3 L11: 0.7617 L22: 0.4863 REMARK 3 L33: 0.5788 L12: 0.5905 REMARK 3 L13: -0.6600 L23: -0.5256 REMARK 3 S TENSOR REMARK 3 S11: -0.5061 S12: -0.2394 S13: 0.1564 REMARK 3 S21: -0.0168 S22: 0.3010 S23: 0.1883 REMARK 3 S31: -0.3247 S32: -1.0940 S33: -0.1984 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 17 THROUGH 43 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4691 -7.9213 21.5637 REMARK 3 T TENSOR REMARK 3 T11: 0.6122 T22: 0.6519 REMARK 3 T33: 0.7995 T12: 0.1022 REMARK 3 T13: 0.0076 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 3.8422 L22: 0.7159 REMARK 3 L33: 2.8284 L12: -0.9979 REMARK 3 L13: -3.0695 L23: 1.1017 REMARK 3 S TENSOR REMARK 3 S11: 0.7387 S12: 1.5895 S13: -0.2246 REMARK 3 S21: 0.0371 S22: -0.4941 S23: 0.9769 REMARK 3 S31: -1.3596 S32: -1.9438 S33: 0.0751 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 44 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.4708 -16.1277 28.1768 REMARK 3 T TENSOR REMARK 3 T11: 0.4966 T22: 0.8323 REMARK 3 T33: -1.4855 T12: -0.0601 REMARK 3 T13: -0.2205 T23: -0.2489 REMARK 3 L TENSOR REMARK 3 L11: 0.8278 L22: 0.2634 REMARK 3 L33: 3.0771 L12: -0.3480 REMARK 3 L13: -0.4296 L23: 0.6418 REMARK 3 S TENSOR REMARK 3 S11: 0.5460 S12: 0.4808 S13: -0.2095 REMARK 3 S21: 0.6500 S22: -0.1549 S23: -0.1137 REMARK 3 S31: -0.2635 S32: -0.6057 S33: 4.2304 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 63 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.8449 -23.0358 28.6403 REMARK 3 T TENSOR REMARK 3 T11: 0.6490 T22: 0.5001 REMARK 3 T33: -0.7602 T12: 0.0135 REMARK 3 T13: 0.7057 T23: 0.1457 REMARK 3 L TENSOR REMARK 3 L11: 0.0101 L22: 1.8906 REMARK 3 L33: 1.8215 L12: -0.0534 REMARK 3 L13: -0.0151 L23: -1.8653 REMARK 3 S TENSOR REMARK 3 S11: 0.3412 S12: -0.1737 S13: 0.2361 REMARK 3 S21: -0.3438 S22: -0.6532 S23: -0.6851 REMARK 3 S31: -0.2401 S32: 0.6808 S33: -0.9775 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 84 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.3062 -26.3790 47.4931 REMARK 3 T TENSOR REMARK 3 T11: 1.0504 T22: 0.9679 REMARK 3 T33: 0.6853 T12: 0.1291 REMARK 3 T13: -0.0740 T23: -0.0424 REMARK 3 L TENSOR REMARK 3 L11: 0.1522 L22: 2.3227 REMARK 3 L33: 1.2930 L12: 0.3852 REMARK 3 L13: 0.4062 L23: 0.2636 REMARK 3 S TENSOR REMARK 3 S11: -0.5539 S12: 0.6024 S13: -0.2169 REMARK 3 S21: 1.1785 S22: 0.0088 S23: -2.2975 REMARK 3 S31: 1.4572 S32: 0.1378 S33: -0.5403 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 105 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9626 -19.5279 43.8016 REMARK 3 T TENSOR REMARK 3 T11: 0.8167 T22: 0.6688 REMARK 3 T33: 0.6590 T12: -0.0340 REMARK 3 T13: 0.1662 T23: -0.1186 REMARK 3 L TENSOR REMARK 3 L11: 0.5894 L22: 0.9194 REMARK 3 L33: 0.7332 L12: -0.6368 REMARK 3 L13: 0.5867 L23: -0.8410 REMARK 3 S TENSOR REMARK 3 S11: 0.1868 S12: -0.6830 S13: -0.9717 REMARK 3 S21: 0.5529 S22: 0.4455 S23: 1.3005 REMARK 3 S31: 1.8581 S32: -0.2063 S33: 0.1274 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 126 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.0376 -14.5680 28.1868 REMARK 3 T TENSOR REMARK 3 T11: 0.6163 T22: 0.4498 REMARK 3 T33: 0.0272 T12: -0.0095 REMARK 3 T13: 0.0815 T23: 0.0520 REMARK 3 L TENSOR REMARK 3 L11: 0.9885 L22: 1.2334 REMARK 3 L33: 0.0761 L12: 1.0817 REMARK 3 L13: -0.2586 L23: -0.3124 REMARK 3 S TENSOR REMARK 3 S11: 0.5767 S12: 0.1582 S13: -0.4896 REMARK 3 S21: -0.0223 S22: -0.5059 S23: -1.0127 REMARK 3 S31: -0.5918 S32: 0.3790 S33: -0.2306 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 145 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.2867 -0.8692 6.4606 REMARK 3 T TENSOR REMARK 3 T11: 0.8274 T22: 0.9055 REMARK 3 T33: 0.6171 T12: 0.0866 REMARK 3 T13: 0.1576 T23: 0.3012 REMARK 3 L TENSOR REMARK 3 L11: 0.8819 L22: 0.9694 REMARK 3 L33: 0.7682 L12: 0.9505 REMARK 3 L13: 0.7951 L23: 0.8783 REMARK 3 S TENSOR REMARK 3 S11: -0.2938 S12: 1.3932 S13: -0.3379 REMARK 3 S21: 0.0358 S22: 0.2958 S23: -0.8348 REMARK 3 S31: 0.8804 S32: 0.0097 S33: 0.1885 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 161 THROUGH 174 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.4595 3.8135 11.9365 REMARK 3 T TENSOR REMARK 3 T11: 0.4161 T22: 0.4530 REMARK 3 T33: 0.7163 T12: 0.0780 REMARK 3 T13: -0.1566 T23: 0.0323 REMARK 3 L TENSOR REMARK 3 L11: 0.1415 L22: 0.1410 REMARK 3 L33: 0.0509 L12: 0.1655 REMARK 3 L13: -0.1074 L23: -0.0692 REMARK 3 S TENSOR REMARK 3 S11: 0.4707 S12: 0.0573 S13: -0.2748 REMARK 3 S21: -0.2799 S22: -0.9616 S23: 0.8725 REMARK 3 S31: 0.2276 S32: 0.1482 S33: -0.0016 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 175 THROUGH 189 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.2572 -1.4527 20.3452 REMARK 3 T TENSOR REMARK 3 T11: 1.3949 T22: 1.2308 REMARK 3 T33: 0.9786 T12: -0.4209 REMARK 3 T13: 0.0998 T23: -0.0271 REMARK 3 L TENSOR REMARK 3 L11: 0.0131 L22: 0.0675 REMARK 3 L33: 0.0673 L12: 0.0148 REMARK 3 L13: 0.0347 L23: 0.0604 REMARK 3 S TENSOR REMARK 3 S11: 0.1539 S12: -1.9286 S13: -1.1309 REMARK 3 S21: 0.3166 S22: -0.6084 S23: 0.1374 REMARK 3 S31: -0.1215 S32: 0.8714 S33: 0.0000 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 190 THROUGH 205 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.3580 11.1467 7.2670 REMARK 3 T TENSOR REMARK 3 T11: 0.8614 T22: 0.5945 REMARK 3 T33: 1.3430 T12: 0.1099 REMARK 3 T13: 0.2904 T23: 0.0038 REMARK 3 L TENSOR REMARK 3 L11: 0.0433 L22: 0.0214 REMARK 3 L33: 1.6009 L12: 0.0307 REMARK 3 L13: 0.2113 L23: 0.0584 REMARK 3 S TENSOR REMARK 3 S11: 1.0786 S12: 0.1283 S13: -0.2798 REMARK 3 S21: -0.0112 S22: -0.1082 S23: 0.2456 REMARK 3 S31: -0.3213 S32: 1.5732 S33: 0.0777 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 206 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.9169 15.9645 13.7789 REMARK 3 T TENSOR REMARK 3 T11: 0.5027 T22: 0.5631 REMARK 3 T33: 0.5081 T12: -0.1806 REMARK 3 T13: 0.1044 T23: 0.0811 REMARK 3 L TENSOR REMARK 3 L11: 0.1835 L22: 0.2268 REMARK 3 L33: 0.3032 L12: -0.0006 REMARK 3 L13: -0.2257 L23: -0.1060 REMARK 3 S TENSOR REMARK 3 S11: -0.2897 S12: 0.0916 S13: 1.4004 REMARK 3 S21: -0.5133 S22: -0.0120 S23: -0.5560 REMARK 3 S31: -0.1064 S32: 0.1701 S33: -0.0018 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 1 through 5 or REMARK 3 (resid 6 and (name N or name CA or name C REMARK 3 or name O or name CB )) or resid 8 REMARK 3 through 17 or resid 19 through 85 or REMARK 3 resid 87 through 99 or resid 101 through REMARK 3 111 or resid 113 through 131 or resid 133 REMARK 3 through 142 or resid 144 through 153 or REMARK 3 resid 155 through 157 or (resid 158 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB )) or resid 159 through 161 or REMARK 3 (resid 162 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 163 REMARK 3 through 176 or resid 178 through 179 or REMARK 3 resid 181 or (resid 182 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 183 through 186 or (resid 187 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB )) or resid 189 through 191 REMARK 3 or resid 193 through 211 or resid 213 REMARK 3 through 219)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 1 through 6 or REMARK 3 resid 8 through 17 or resid 19 through 85 REMARK 3 or resid 87 through 90 or (resid 91 REMARK 3 through 92 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 93 REMARK 3 through 99 or resid 101 through 111 or REMARK 3 resid 113 through 131 or resid 133 REMARK 3 through 142 or resid 144 through 153 or REMARK 3 resid 155 through 179 or resid 181 REMARK 3 through 187 or resid 189 through 191 or REMARK 3 resid 193 through 211 or resid 213 REMARK 3 through 219)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "C" and (resid 1 through 5 or REMARK 3 (resid 6 and (name N or name CA or name C REMARK 3 or name O or name CB )) or resid 8 REMARK 3 through 17 or resid 19 through 85 or REMARK 3 resid 87 through 90 or (resid 91 through REMARK 3 92 and (name N or name CA or name C or REMARK 3 name O or name CB )) or resid 93 through REMARK 3 99 or resid 101 through 111 or resid 113 REMARK 3 through 131 or resid 133 through 142 or REMARK 3 resid 144 through 153 or resid 155 REMARK 3 through 161 or (resid 162 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 163 through 176 or resid 178 REMARK 3 through 179 or resid 181 or (resid 182 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB )) or resid 183 through 186 REMARK 3 or (resid 187 and (name N or name CA or REMARK 3 name C or name O or name CB )) or resid REMARK 3 189 through 191 or resid 193 through 211 REMARK 3 or resid 213 through 219)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7RJ4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JUL-21. REMARK 100 THE DEPOSITION ID IS D_1000258353. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-DEC-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00003 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CMOS REMARK 200 DETECTOR MANUFACTURER : RDI CMOS_8M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12427 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.320 REMARK 200 RESOLUTION RANGE LOW (A) : 46.320 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 3.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.32 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.59 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 0.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6VKV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05M NAI, 3% PEG 3350, 6% GLYCEROL, REMARK 280 0.1M SODIUM CACODYLATE TRIHYDRATE PH 6.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 6 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z REMARK 290 6555 X-Y,X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 79.54450 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -137.77512 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 159.08900 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 5 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 6 0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 220 REMARK 465 VAL A 221 REMARK 465 GLY A 222 REMARK 465 GLY A 223 REMARK 465 PRO A 224 REMARK 465 GLY A 225 REMARK 465 HIS A 226 REMARK 465 LYS A 227 REMARK 465 ALA A 228 REMARK 465 ARG A 229 REMARK 465 VAL A 230 REMARK 465 LEU A 231 REMARK 465 ALA B 177 REMARK 465 VAL B 221 REMARK 465 GLY B 222 REMARK 465 GLY B 223 REMARK 465 PRO B 224 REMARK 465 GLY B 225 REMARK 465 HIS B 226 REMARK 465 LYS B 227 REMARK 465 ALA B 228 REMARK 465 ARG B 229 REMARK 465 VAL B 230 REMARK 465 LEU B 231 REMARK 465 VAL C 221 REMARK 465 GLY C 222 REMARK 465 GLY C 223 REMARK 465 PRO C 224 REMARK 465 GLY C 225 REMARK 465 HIS C 226 REMARK 465 LYS C 227 REMARK 465 ALA C 228 REMARK 465 ARG C 229 REMARK 465 VAL C 230 REMARK 465 LEU C 231 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 18 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 91 CG1 CG2 CD1 REMARK 470 LEU B 6 CG CD1 CD2 REMARK 470 ARG B 18 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 158 CG CD CE NZ REMARK 470 ARG B 162 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 182 CG CD CE NZ REMARK 470 GLU B 187 CG CD OE1 OE2 REMARK 470 ARG C 18 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 143 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 158 CG CD CE NZ REMARK 470 GLU C 212 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 31 -125.47 48.78 REMARK 500 ALA A 177 -151.03 -137.62 REMARK 500 LEU A 189 -31.09 -132.52 REMARK 500 ALA B 31 -122.84 47.17 REMARK 500 GLN B 179 4.23 -67.96 REMARK 500 GLU B 187 -11.96 71.55 REMARK 500 THR B 188 -54.16 -122.56 REMARK 500 ALA C 31 -121.07 49.13 REMARK 500 ALA C 177 -154.62 -127.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 435 DISTANCE = 6.53 ANGSTROMS REMARK 525 HOH C 462 DISTANCE = 6.08 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7RAR RELATED DB: PDB REMARK 900 RELATED ID: 7RAO RELATED DB: PDB REMARK 900 RELATED ID: 7RHN RELATED DB: PDB REMARK 900 RELATED ID: 7RHM RELATED DB: PDB REMARK 900 RELATED ID: 7RJ2 RELATED DB: PDB DBREF 7RJ4 A 1 231 UNP B6DRA0 B6DRA0_9HIV1 133 363 DBREF 7RJ4 B 1 231 UNP B6DRA0 B6DRA0_9HIV1 133 363 DBREF 7RJ4 C 1 231 UNP B6DRA0 B6DRA0_9HIV1 133 363 SEQADV 7RJ4 CYS A 14 UNP B6DRA0 ALA 146 ENGINEERED MUTATION SEQADV 7RJ4 CYS A 45 UNP B6DRA0 GLU 177 ENGINEERED MUTATION SEQADV 7RJ4 ASP A 74 UNP B6DRA0 ASN 206 ENGINEERED MUTATION SEQADV 7RJ4 ALA A 184 UNP B6DRA0 TRP 316 ENGINEERED MUTATION SEQADV 7RJ4 ALA A 185 UNP B6DRA0 MET 317 ENGINEERED MUTATION SEQADV 7RJ4 CYS B 14 UNP B6DRA0 ALA 146 ENGINEERED MUTATION SEQADV 7RJ4 CYS B 45 UNP B6DRA0 GLU 177 ENGINEERED MUTATION SEQADV 7RJ4 ASP B 74 UNP B6DRA0 ASN 206 ENGINEERED MUTATION SEQADV 7RJ4 ALA B 184 UNP B6DRA0 TRP 316 ENGINEERED MUTATION SEQADV 7RJ4 ALA B 185 UNP B6DRA0 MET 317 ENGINEERED MUTATION SEQADV 7RJ4 CYS C 14 UNP B6DRA0 ALA 146 ENGINEERED MUTATION SEQADV 7RJ4 CYS C 45 UNP B6DRA0 GLU 177 ENGINEERED MUTATION SEQADV 7RJ4 ASP C 74 UNP B6DRA0 ASN 206 ENGINEERED MUTATION SEQADV 7RJ4 ALA C 184 UNP B6DRA0 TRP 316 ENGINEERED MUTATION SEQADV 7RJ4 ALA C 185 UNP B6DRA0 MET 317 ENGINEERED MUTATION SEQRES 1 A 231 PRO ILE VAL GLN ASN LEU GLN GLY GLN MET VAL HIS GLN SEQRES 2 A 231 CYS ILE SER PRO ARG THR LEU ASN ALA TRP VAL LYS VAL SEQRES 3 A 231 VAL GLU GLU LYS ALA PHE SER PRO GLU VAL ILE PRO MET SEQRES 4 A 231 PHE SER ALA LEU SER CYS GLY ALA THR PRO GLN ASP LEU SEQRES 5 A 231 ASN THR MET LEU ASN THR VAL GLY GLY HIS GLN ALA ALA SEQRES 6 A 231 MET GLN MET LEU LYS GLU THR ILE ASP GLU GLU ALA ALA SEQRES 7 A 231 GLU TRP ASP ARG LEU HIS PRO VAL HIS ALA GLY PRO ILE SEQRES 8 A 231 ALA PRO GLY GLN MET ARG GLU PRO ARG GLY SER ASP ILE SEQRES 9 A 231 ALA GLY THR THR SER THR LEU GLN GLU GLN ILE GLY TRP SEQRES 10 A 231 MET THR HIS ASN PRO PRO ILE PRO VAL GLY GLU ILE TYR SEQRES 11 A 231 LYS ARG TRP ILE ILE LEU GLY LEU ASN LYS ILE VAL ARG SEQRES 12 A 231 MET TYR SER PRO THR SER ILE LEU ASP ILE ARG GLN GLY SEQRES 13 A 231 PRO LYS GLU PRO PHE ARG ASP TYR VAL ASP ARG PHE TYR SEQRES 14 A 231 LYS THR LEU ARG ALA GLU GLN ALA SER GLN GLU VAL LYS SEQRES 15 A 231 ASN ALA ALA THR GLU THR LEU LEU VAL GLN ASN ALA ASN SEQRES 16 A 231 PRO ASP CYS LYS THR ILE LEU LYS ALA LEU GLY PRO GLY SEQRES 17 A 231 ALA THR LEU GLU GLU MET MET THR ALA CYS GLN GLY VAL SEQRES 18 A 231 GLY GLY PRO GLY HIS LYS ALA ARG VAL LEU SEQRES 1 B 231 PRO ILE VAL GLN ASN LEU GLN GLY GLN MET VAL HIS GLN SEQRES 2 B 231 CYS ILE SER PRO ARG THR LEU ASN ALA TRP VAL LYS VAL SEQRES 3 B 231 VAL GLU GLU LYS ALA PHE SER PRO GLU VAL ILE PRO MET SEQRES 4 B 231 PHE SER ALA LEU SER CYS GLY ALA THR PRO GLN ASP LEU SEQRES 5 B 231 ASN THR MET LEU ASN THR VAL GLY GLY HIS GLN ALA ALA SEQRES 6 B 231 MET GLN MET LEU LYS GLU THR ILE ASP GLU GLU ALA ALA SEQRES 7 B 231 GLU TRP ASP ARG LEU HIS PRO VAL HIS ALA GLY PRO ILE SEQRES 8 B 231 ALA PRO GLY GLN MET ARG GLU PRO ARG GLY SER ASP ILE SEQRES 9 B 231 ALA GLY THR THR SER THR LEU GLN GLU GLN ILE GLY TRP SEQRES 10 B 231 MET THR HIS ASN PRO PRO ILE PRO VAL GLY GLU ILE TYR SEQRES 11 B 231 LYS ARG TRP ILE ILE LEU GLY LEU ASN LYS ILE VAL ARG SEQRES 12 B 231 MET TYR SER PRO THR SER ILE LEU ASP ILE ARG GLN GLY SEQRES 13 B 231 PRO LYS GLU PRO PHE ARG ASP TYR VAL ASP ARG PHE TYR SEQRES 14 B 231 LYS THR LEU ARG ALA GLU GLN ALA SER GLN GLU VAL LYS SEQRES 15 B 231 ASN ALA ALA THR GLU THR LEU LEU VAL GLN ASN ALA ASN SEQRES 16 B 231 PRO ASP CYS LYS THR ILE LEU LYS ALA LEU GLY PRO GLY SEQRES 17 B 231 ALA THR LEU GLU GLU MET MET THR ALA CYS GLN GLY VAL SEQRES 18 B 231 GLY GLY PRO GLY HIS LYS ALA ARG VAL LEU SEQRES 1 C 231 PRO ILE VAL GLN ASN LEU GLN GLY GLN MET VAL HIS GLN SEQRES 2 C 231 CYS ILE SER PRO ARG THR LEU ASN ALA TRP VAL LYS VAL SEQRES 3 C 231 VAL GLU GLU LYS ALA PHE SER PRO GLU VAL ILE PRO MET SEQRES 4 C 231 PHE SER ALA LEU SER CYS GLY ALA THR PRO GLN ASP LEU SEQRES 5 C 231 ASN THR MET LEU ASN THR VAL GLY GLY HIS GLN ALA ALA SEQRES 6 C 231 MET GLN MET LEU LYS GLU THR ILE ASP GLU GLU ALA ALA SEQRES 7 C 231 GLU TRP ASP ARG LEU HIS PRO VAL HIS ALA GLY PRO ILE SEQRES 8 C 231 ALA PRO GLY GLN MET ARG GLU PRO ARG GLY SER ASP ILE SEQRES 9 C 231 ALA GLY THR THR SER THR LEU GLN GLU GLN ILE GLY TRP SEQRES 10 C 231 MET THR HIS ASN PRO PRO ILE PRO VAL GLY GLU ILE TYR SEQRES 11 C 231 LYS ARG TRP ILE ILE LEU GLY LEU ASN LYS ILE VAL ARG SEQRES 12 C 231 MET TYR SER PRO THR SER ILE LEU ASP ILE ARG GLN GLY SEQRES 13 C 231 PRO LYS GLU PRO PHE ARG ASP TYR VAL ASP ARG PHE TYR SEQRES 14 C 231 LYS THR LEU ARG ALA GLU GLN ALA SER GLN GLU VAL LYS SEQRES 15 C 231 ASN ALA ALA THR GLU THR LEU LEU VAL GLN ASN ALA ASN SEQRES 16 C 231 PRO ASP CYS LYS THR ILE LEU LYS ALA LEU GLY PRO GLY SEQRES 17 C 231 ALA THR LEU GLU GLU MET MET THR ALA CYS GLN GLY VAL SEQRES 18 C 231 GLY GLY PRO GLY HIS LYS ALA ARG VAL LEU HET QNG A 301 64 HET CL A 302 1 HET CL A 303 1 HET CL A 304 1 HET CL A 305 1 HET CL A 306 1 HET CL A 307 1 HET IOD A 308 1 HET QNG B 301 64 HET CL B 302 1 HET CL B 303 1 HET CL B 304 1 HET CL B 305 1 HET CL B 306 1 HET CL B 307 1 HET IOD B 308 1 HET QNG C 301 64 HET CL C 302 1 HET CL C 303 1 HET CL C 304 1 HET CL C 305 1 HET CL C 306 1 HET CL C 307 1 HET IOD C 308 1 HETNAM QNG LENACAPAVIR HETNAM CL CHLORIDE ION HETNAM IOD IODIDE ION HETSYN QNG SUNLENCA; GS-CA1; GS-6207 FORMUL 4 QNG 3(C39 H32 CL F10 N7 O5 S2) FORMUL 5 CL 18(CL 1-) FORMUL 11 IOD 3(I 1-) FORMUL 28 HOH *132(H2 O) HELIX 1 AA1 SER A 16 ALA A 31 1 16 HELIX 2 AA2 GLU A 35 SER A 44 1 10 HELIX 3 AA3 THR A 48 THR A 58 1 11 HELIX 4 AA4 HIS A 62 HIS A 84 1 23 HELIX 5 AA5 ARG A 100 ALA A 105 1 6 HELIX 6 AA6 THR A 110 THR A 119 1 10 HELIX 7 AA7 PRO A 125 TYR A 145 1 21 HELIX 8 AA8 SER A 149 ILE A 153 5 5 HELIX 9 AA9 PRO A 160 GLU A 175 1 16 HELIX 10 AB1 SER A 178 LEU A 190 1 13 HELIX 11 AB2 ASN A 195 GLY A 206 1 12 HELIX 12 AB3 THR A 210 CYS A 218 1 9 HELIX 13 AB4 SER B 16 ALA B 31 1 16 HELIX 14 AB5 GLU B 35 SER B 44 1 10 HELIX 15 AB6 THR B 48 THR B 58 1 11 HELIX 16 AB7 HIS B 62 HIS B 84 1 23 HELIX 17 AB8 ARG B 100 ALA B 105 1 6 HELIX 18 AB9 THR B 110 THR B 119 1 10 HELIX 19 AC1 PRO B 125 TYR B 145 1 21 HELIX 20 AC2 SER B 149 ILE B 153 5 5 HELIX 21 AC3 PRO B 160 GLU B 175 1 16 HELIX 22 AC4 GLN B 179 THR B 186 1 8 HELIX 23 AC5 THR B 188 ASN B 193 1 6 HELIX 24 AC6 ASN B 195 GLY B 206 1 12 HELIX 25 AC7 THR B 210 CYS B 218 1 9 HELIX 26 AC8 SER C 16 ALA C 31 1 16 HELIX 27 AC9 GLU C 35 SER C 44 1 10 HELIX 28 AD1 THR C 48 THR C 58 1 11 HELIX 29 AD2 HIS C 62 HIS C 84 1 23 HELIX 30 AD3 ARG C 100 ALA C 105 1 6 HELIX 31 AD4 THR C 110 THR C 119 1 10 HELIX 32 AD5 PRO C 125 TYR C 145 1 21 HELIX 33 AD6 SER C 149 ILE C 153 5 5 HELIX 34 AD7 PRO C 160 GLU C 175 1 16 HELIX 35 AD8 SER C 178 LEU C 190 1 13 HELIX 36 AD9 ASN C 195 GLY C 206 1 12 HELIX 37 AE1 THR C 210 CYS C 218 1 9 SHEET 1 AA1 2 ILE A 2 GLN A 4 0 SHEET 2 AA1 2 MET A 10 HIS A 12 -1 O VAL A 11 N VAL A 3 SHEET 1 AA2 2 ILE B 2 GLN B 4 0 SHEET 2 AA2 2 MET B 10 HIS B 12 -1 O VAL B 11 N VAL B 3 SHEET 1 AA3 2 ILE C 2 GLN C 4 0 SHEET 2 AA3 2 MET C 10 HIS C 12 -1 O VAL C 11 N VAL C 3 SSBOND 1 CYS A 14 CYS B 45 1555 3655 2.10 SSBOND 2 CYS A 45 CYS B 14 1555 2545 1.91 SSBOND 3 CYS A 198 CYS A 218 1555 1555 2.04 SSBOND 4 CYS B 198 CYS B 218 1555 1555 2.03 SSBOND 5 CYS C 14 CYS C 45 1555 5555 2.05 SSBOND 6 CYS C 198 CYS C 218 1555 1555 2.03 CISPEP 1 ASN A 121 PRO A 122 0 0.83 CISPEP 2 ASN B 121 PRO B 122 0 0.64 CISPEP 3 ASN C 121 PRO C 122 0 0.57 CRYST1 159.089 159.089 56.984 90.00 90.00 120.00 P 6 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006286 0.003629 0.000000 0.00000 SCALE2 0.000000 0.007258 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017549 0.00000 MTRIX1 1 -0.999721 -0.014868 -0.018342 158.19995 1 MTRIX2 1 0.014983 -0.999869 -0.006173 -93.26695 1 MTRIX3 1 -0.018247 -0.006447 0.999813 1.29947 1 MTRIX1 2 0.024436 -0.999674 0.007457 -47.94742 1 MTRIX2 2 -0.999666 -0.024497 -0.008260 78.33173 1 MTRIX3 2 0.008440 -0.007252 -0.999938 25.94679 1