data_7RMY # _entry.id 7RMY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7RMY pdb_00007rmy 10.2210/pdb7rmy/pdb WWPDB D_1000258572 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-08-03 2 'Structure model' 1 1 2022-08-10 3 'Structure model' 1 2 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7RMY _pdbx_database_status.recvd_initial_deposition_date 2021-07-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bera, A.K.' 1 ? 'Hicks, D.R.' 2 ? 'Kang, A.' 3 ? 'Sankaran, B.' 4 ? 'Baker, D.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 119 _citation.language ? _citation.page_first e2113400119 _citation.page_last e2113400119 _citation.title 'De novo design of protein homodimers containing tunable symmetric protein pockets.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.2113400119 _citation.pdbx_database_id_PubMed 35862457 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hicks, D.R.' 1 0000-0003-2950-1848 primary 'Kennedy, M.A.' 2 0000-0003-3422-9172 primary 'Thompson, K.A.' 3 0000-0001-9388-9539 primary 'DeWitt, M.' 4 ? primary 'Coventry, B.' 5 ? primary 'Kang, A.' 6 ? primary 'Bera, A.K.' 7 0000-0001-9473-2912 primary 'Brunette, T.J.' 8 0000-0003-0748-8224 primary 'Sankaran, B.' 9 ? primary 'Stoddard, B.' 10 ? primary 'Baker, D.' 11 0000-0001-7896-6217 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'De Novo designed tunable homodimer, D_3-337' 30055.459 1 ? ? ? ? 2 water nat water 18.015 5 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SGSGSSEELKKVQKMVSQILATAEAVLKLAKVLGDPKAVELAERILEDAKELAKRAESGDEETLRRAQTLLKVLKMVLEI LLLAIKVELAAKELGDPKAVEAAQRILKQALRLLAEIKSGDEETLKRAQELLKVLKMVLRIIYLAIEVEKAAKELGDPTA VEAAQRILELALRLLQKVESGDEDTLRKALELLEVLYMVLRIIRLAIEVEKLAKKAGDPSAVEEAQRILKQALRLLKEIS SGDEQTLDEAAKTLSFLAAELEAIAFAIRVKW ; _entity_poly.pdbx_seq_one_letter_code_can ;SGSGSSEELKKVQKMVSQILATAEAVLKLAKVLGDPKAVELAERILEDAKELAKRAESGDEETLRRAQTLLKVLKMVLEI LLLAIKVELAAKELGDPKAVEAAQRILKQALRLLAEIKSGDEETLKRAQELLKVLKMVLRIIYLAIEVEKAAKELGDPTA VEAAQRILELALRLLQKVESGDEDTLRKALELLEVLYMVLRIIRLAIEVEKLAKKAGDPSAVEEAQRILKQALRLLKEIS SGDEQTLDEAAKTLSFLAAELEAIAFAIRVKW ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 GLY n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLU n 1 8 GLU n 1 9 LEU n 1 10 LYS n 1 11 LYS n 1 12 VAL n 1 13 GLN n 1 14 LYS n 1 15 MET n 1 16 VAL n 1 17 SER n 1 18 GLN n 1 19 ILE n 1 20 LEU n 1 21 ALA n 1 22 THR n 1 23 ALA n 1 24 GLU n 1 25 ALA n 1 26 VAL n 1 27 LEU n 1 28 LYS n 1 29 LEU n 1 30 ALA n 1 31 LYS n 1 32 VAL n 1 33 LEU n 1 34 GLY n 1 35 ASP n 1 36 PRO n 1 37 LYS n 1 38 ALA n 1 39 VAL n 1 40 GLU n 1 41 LEU n 1 42 ALA n 1 43 GLU n 1 44 ARG n 1 45 ILE n 1 46 LEU n 1 47 GLU n 1 48 ASP n 1 49 ALA n 1 50 LYS n 1 51 GLU n 1 52 LEU n 1 53 ALA n 1 54 LYS n 1 55 ARG n 1 56 ALA n 1 57 GLU n 1 58 SER n 1 59 GLY n 1 60 ASP n 1 61 GLU n 1 62 GLU n 1 63 THR n 1 64 LEU n 1 65 ARG n 1 66 ARG n 1 67 ALA n 1 68 GLN n 1 69 THR n 1 70 LEU n 1 71 LEU n 1 72 LYS n 1 73 VAL n 1 74 LEU n 1 75 LYS n 1 76 MET n 1 77 VAL n 1 78 LEU n 1 79 GLU n 1 80 ILE n 1 81 LEU n 1 82 LEU n 1 83 LEU n 1 84 ALA n 1 85 ILE n 1 86 LYS n 1 87 VAL n 1 88 GLU n 1 89 LEU n 1 90 ALA n 1 91 ALA n 1 92 LYS n 1 93 GLU n 1 94 LEU n 1 95 GLY n 1 96 ASP n 1 97 PRO n 1 98 LYS n 1 99 ALA n 1 100 VAL n 1 101 GLU n 1 102 ALA n 1 103 ALA n 1 104 GLN n 1 105 ARG n 1 106 ILE n 1 107 LEU n 1 108 LYS n 1 109 GLN n 1 110 ALA n 1 111 LEU n 1 112 ARG n 1 113 LEU n 1 114 LEU n 1 115 ALA n 1 116 GLU n 1 117 ILE n 1 118 LYS n 1 119 SER n 1 120 GLY n 1 121 ASP n 1 122 GLU n 1 123 GLU n 1 124 THR n 1 125 LEU n 1 126 LYS n 1 127 ARG n 1 128 ALA n 1 129 GLN n 1 130 GLU n 1 131 LEU n 1 132 LEU n 1 133 LYS n 1 134 VAL n 1 135 LEU n 1 136 LYS n 1 137 MET n 1 138 VAL n 1 139 LEU n 1 140 ARG n 1 141 ILE n 1 142 ILE n 1 143 TYR n 1 144 LEU n 1 145 ALA n 1 146 ILE n 1 147 GLU n 1 148 VAL n 1 149 GLU n 1 150 LYS n 1 151 ALA n 1 152 ALA n 1 153 LYS n 1 154 GLU n 1 155 LEU n 1 156 GLY n 1 157 ASP n 1 158 PRO n 1 159 THR n 1 160 ALA n 1 161 VAL n 1 162 GLU n 1 163 ALA n 1 164 ALA n 1 165 GLN n 1 166 ARG n 1 167 ILE n 1 168 LEU n 1 169 GLU n 1 170 LEU n 1 171 ALA n 1 172 LEU n 1 173 ARG n 1 174 LEU n 1 175 LEU n 1 176 GLN n 1 177 LYS n 1 178 VAL n 1 179 GLU n 1 180 SER n 1 181 GLY n 1 182 ASP n 1 183 GLU n 1 184 ASP n 1 185 THR n 1 186 LEU n 1 187 ARG n 1 188 LYS n 1 189 ALA n 1 190 LEU n 1 191 GLU n 1 192 LEU n 1 193 LEU n 1 194 GLU n 1 195 VAL n 1 196 LEU n 1 197 TYR n 1 198 MET n 1 199 VAL n 1 200 LEU n 1 201 ARG n 1 202 ILE n 1 203 ILE n 1 204 ARG n 1 205 LEU n 1 206 ALA n 1 207 ILE n 1 208 GLU n 1 209 VAL n 1 210 GLU n 1 211 LYS n 1 212 LEU n 1 213 ALA n 1 214 LYS n 1 215 LYS n 1 216 ALA n 1 217 GLY n 1 218 ASP n 1 219 PRO n 1 220 SER n 1 221 ALA n 1 222 VAL n 1 223 GLU n 1 224 GLU n 1 225 ALA n 1 226 GLN n 1 227 ARG n 1 228 ILE n 1 229 LEU n 1 230 LYS n 1 231 GLN n 1 232 ALA n 1 233 LEU n 1 234 ARG n 1 235 LEU n 1 236 LEU n 1 237 LYS n 1 238 GLU n 1 239 ILE n 1 240 SER n 1 241 SER n 1 242 GLY n 1 243 ASP n 1 244 GLU n 1 245 GLN n 1 246 THR n 1 247 LEU n 1 248 ASP n 1 249 GLU n 1 250 ALA n 1 251 ALA n 1 252 LYS n 1 253 THR n 1 254 LEU n 1 255 SER n 1 256 PHE n 1 257 LEU n 1 258 ALA n 1 259 ALA n 1 260 GLU n 1 261 LEU n 1 262 GLU n 1 263 ALA n 1 264 ILE n 1 265 ALA n 1 266 PHE n 1 267 ALA n 1 268 ILE n 1 269 ARG n 1 270 VAL n 1 271 LYS n 1 272 TRP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 272 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'synthetic construct' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -4 ? ? ? A . n A 1 2 GLY 2 -3 ? ? ? A . n A 1 3 SER 3 -2 ? ? ? A . n A 1 4 GLY 4 -1 ? ? ? A . n A 1 5 SER 5 0 ? ? ? A . n A 1 6 SER 6 1 1 SER SER A . n A 1 7 GLU 7 2 2 GLU GLU A . n A 1 8 GLU 8 3 3 GLU GLU A . n A 1 9 LEU 9 4 4 LEU LEU A . n A 1 10 LYS 10 5 5 LYS LYS A . n A 1 11 LYS 11 6 6 LYS LYS A . n A 1 12 VAL 12 7 7 VAL VAL A . n A 1 13 GLN 13 8 8 GLN GLN A . n A 1 14 LYS 14 9 9 LYS LYS A . n A 1 15 MET 15 10 10 MET MET A . n A 1 16 VAL 16 11 11 VAL VAL A . n A 1 17 SER 17 12 12 SER SER A . n A 1 18 GLN 18 13 13 GLN GLN A . n A 1 19 ILE 19 14 14 ILE ILE A . n A 1 20 LEU 20 15 15 LEU LEU A . n A 1 21 ALA 21 16 16 ALA ALA A . n A 1 22 THR 22 17 17 THR THR A . n A 1 23 ALA 23 18 18 ALA ALA A . n A 1 24 GLU 24 19 19 GLU GLU A . n A 1 25 ALA 25 20 20 ALA ALA A . n A 1 26 VAL 26 21 21 VAL VAL A . n A 1 27 LEU 27 22 22 LEU LEU A . n A 1 28 LYS 28 23 23 LYS LYS A . n A 1 29 LEU 29 24 24 LEU LEU A . n A 1 30 ALA 30 25 25 ALA ALA A . n A 1 31 LYS 31 26 26 LYS LYS A . n A 1 32 VAL 32 27 27 VAL VAL A . n A 1 33 LEU 33 28 28 LEU LEU A . n A 1 34 GLY 34 29 29 GLY GLY A . n A 1 35 ASP 35 30 30 ASP ASP A . n A 1 36 PRO 36 31 31 PRO PRO A . n A 1 37 LYS 37 32 32 LYS LYS A . n A 1 38 ALA 38 33 33 ALA ALA A . n A 1 39 VAL 39 34 34 VAL VAL A . n A 1 40 GLU 40 35 35 GLU GLU A . n A 1 41 LEU 41 36 36 LEU LEU A . n A 1 42 ALA 42 37 37 ALA ALA A . n A 1 43 GLU 43 38 38 GLU GLU A . n A 1 44 ARG 44 39 39 ARG ARG A . n A 1 45 ILE 45 40 40 ILE ILE A . n A 1 46 LEU 46 41 41 LEU LEU A . n A 1 47 GLU 47 42 42 GLU GLU A . n A 1 48 ASP 48 43 43 ASP ASP A . n A 1 49 ALA 49 44 44 ALA ALA A . n A 1 50 LYS 50 45 45 LYS LYS A . n A 1 51 GLU 51 46 46 GLU GLU A . n A 1 52 LEU 52 47 47 LEU LEU A . n A 1 53 ALA 53 48 48 ALA ALA A . n A 1 54 LYS 54 49 49 LYS LYS A . n A 1 55 ARG 55 50 50 ARG ARG A . n A 1 56 ALA 56 51 51 ALA ALA A . n A 1 57 GLU 57 52 52 GLU GLU A . n A 1 58 SER 58 53 53 SER SER A . n A 1 59 GLY 59 54 54 GLY GLY A . n A 1 60 ASP 60 55 55 ASP ASP A . n A 1 61 GLU 61 56 56 GLU GLU A . n A 1 62 GLU 62 57 57 GLU GLU A . n A 1 63 THR 63 58 58 THR THR A . n A 1 64 LEU 64 59 59 LEU LEU A . n A 1 65 ARG 65 60 60 ARG ARG A . n A 1 66 ARG 66 61 61 ARG ARG A . n A 1 67 ALA 67 62 62 ALA ALA A . n A 1 68 GLN 68 63 63 GLN GLN A . n A 1 69 THR 69 64 64 THR THR A . n A 1 70 LEU 70 65 65 LEU LEU A . n A 1 71 LEU 71 66 66 LEU LEU A . n A 1 72 LYS 72 67 67 LYS LYS A . n A 1 73 VAL 73 68 68 VAL VAL A . n A 1 74 LEU 74 69 69 LEU LEU A . n A 1 75 LYS 75 70 70 LYS LYS A . n A 1 76 MET 76 71 71 MET MET A . n A 1 77 VAL 77 72 72 VAL VAL A . n A 1 78 LEU 78 73 73 LEU LEU A . n A 1 79 GLU 79 74 74 GLU GLU A . n A 1 80 ILE 80 75 75 ILE ILE A . n A 1 81 LEU 81 76 76 LEU LEU A . n A 1 82 LEU 82 77 77 LEU LEU A . n A 1 83 LEU 83 78 78 LEU LEU A . n A 1 84 ALA 84 79 79 ALA ALA A . n A 1 85 ILE 85 80 80 ILE ILE A . n A 1 86 LYS 86 81 81 LYS LYS A . n A 1 87 VAL 87 82 82 VAL VAL A . n A 1 88 GLU 88 83 83 GLU GLU A . n A 1 89 LEU 89 84 84 LEU LEU A . n A 1 90 ALA 90 85 85 ALA ALA A . n A 1 91 ALA 91 86 86 ALA ALA A . n A 1 92 LYS 92 87 87 LYS LYS A . n A 1 93 GLU 93 88 88 GLU GLU A . n A 1 94 LEU 94 89 89 LEU LEU A . n A 1 95 GLY 95 90 90 GLY GLY A . n A 1 96 ASP 96 91 91 ASP ASP A . n A 1 97 PRO 97 92 92 PRO PRO A . n A 1 98 LYS 98 93 93 LYS LYS A . n A 1 99 ALA 99 94 94 ALA ALA A . n A 1 100 VAL 100 95 95 VAL VAL A . n A 1 101 GLU 101 96 96 GLU GLU A . n A 1 102 ALA 102 97 97 ALA ALA A . n A 1 103 ALA 103 98 98 ALA ALA A . n A 1 104 GLN 104 99 99 GLN GLN A . n A 1 105 ARG 105 100 100 ARG ARG A . n A 1 106 ILE 106 101 101 ILE ILE A . n A 1 107 LEU 107 102 102 LEU LEU A . n A 1 108 LYS 108 103 103 LYS LYS A . n A 1 109 GLN 109 104 104 GLN GLN A . n A 1 110 ALA 110 105 105 ALA ALA A . n A 1 111 LEU 111 106 106 LEU LEU A . n A 1 112 ARG 112 107 107 ARG ARG A . n A 1 113 LEU 113 108 108 LEU LEU A . n A 1 114 LEU 114 109 109 LEU LEU A . n A 1 115 ALA 115 110 110 ALA ALA A . n A 1 116 GLU 116 111 111 GLU GLU A . n A 1 117 ILE 117 112 112 ILE ILE A . n A 1 118 LYS 118 113 113 LYS LYS A . n A 1 119 SER 119 114 114 SER SER A . n A 1 120 GLY 120 115 115 GLY GLY A . n A 1 121 ASP 121 116 116 ASP ASP A . n A 1 122 GLU 122 117 117 GLU GLU A . n A 1 123 GLU 123 118 118 GLU GLU A . n A 1 124 THR 124 119 119 THR THR A . n A 1 125 LEU 125 120 120 LEU LEU A . n A 1 126 LYS 126 121 121 LYS LYS A . n A 1 127 ARG 127 122 122 ARG ARG A . n A 1 128 ALA 128 123 123 ALA ALA A . n A 1 129 GLN 129 124 124 GLN GLN A . n A 1 130 GLU 130 125 125 GLU GLU A . n A 1 131 LEU 131 126 126 LEU LEU A . n A 1 132 LEU 132 127 127 LEU LEU A . n A 1 133 LYS 133 128 128 LYS LYS A . n A 1 134 VAL 134 129 129 VAL VAL A . n A 1 135 LEU 135 130 130 LEU LEU A . n A 1 136 LYS 136 131 131 LYS LYS A . n A 1 137 MET 137 132 132 MET MET A . n A 1 138 VAL 138 133 133 VAL VAL A . n A 1 139 LEU 139 134 134 LEU LEU A . n A 1 140 ARG 140 135 135 ARG ARG A . n A 1 141 ILE 141 136 136 ILE ILE A . n A 1 142 ILE 142 137 137 ILE ILE A . n A 1 143 TYR 143 138 138 TYR TYR A . n A 1 144 LEU 144 139 139 LEU LEU A . n A 1 145 ALA 145 140 140 ALA ALA A . n A 1 146 ILE 146 141 141 ILE ILE A . n A 1 147 GLU 147 142 142 GLU GLU A . n A 1 148 VAL 148 143 143 VAL VAL A . n A 1 149 GLU 149 144 144 GLU GLU A . n A 1 150 LYS 150 145 145 LYS LYS A . n A 1 151 ALA 151 146 146 ALA ALA A . n A 1 152 ALA 152 147 147 ALA ALA A . n A 1 153 LYS 153 148 148 LYS LYS A . n A 1 154 GLU 154 149 149 GLU GLU A . n A 1 155 LEU 155 150 150 LEU LEU A . n A 1 156 GLY 156 151 151 GLY GLY A . n A 1 157 ASP 157 152 152 ASP ASP A . n A 1 158 PRO 158 153 153 PRO PRO A . n A 1 159 THR 159 154 154 THR THR A . n A 1 160 ALA 160 155 155 ALA ALA A . n A 1 161 VAL 161 156 156 VAL VAL A . n A 1 162 GLU 162 157 157 GLU GLU A . n A 1 163 ALA 163 158 158 ALA ALA A . n A 1 164 ALA 164 159 159 ALA ALA A . n A 1 165 GLN 165 160 160 GLN GLN A . n A 1 166 ARG 166 161 161 ARG ARG A . n A 1 167 ILE 167 162 162 ILE ILE A . n A 1 168 LEU 168 163 163 LEU LEU A . n A 1 169 GLU 169 164 164 GLU GLU A . n A 1 170 LEU 170 165 165 LEU LEU A . n A 1 171 ALA 171 166 166 ALA ALA A . n A 1 172 LEU 172 167 167 LEU LEU A . n A 1 173 ARG 173 168 168 ARG ARG A . n A 1 174 LEU 174 169 169 LEU LEU A . n A 1 175 LEU 175 170 170 LEU LEU A . n A 1 176 GLN 176 171 171 GLN GLN A . n A 1 177 LYS 177 172 172 LYS LYS A . n A 1 178 VAL 178 173 173 VAL VAL A . n A 1 179 GLU 179 174 174 GLU GLU A . n A 1 180 SER 180 175 175 SER SER A . n A 1 181 GLY 181 176 176 GLY GLY A . n A 1 182 ASP 182 177 177 ASP ASP A . n A 1 183 GLU 183 178 178 GLU GLU A . n A 1 184 ASP 184 179 179 ASP ASP A . n A 1 185 THR 185 180 180 THR THR A . n A 1 186 LEU 186 181 181 LEU LEU A . n A 1 187 ARG 187 182 182 ARG ARG A . n A 1 188 LYS 188 183 183 LYS LYS A . n A 1 189 ALA 189 184 184 ALA ALA A . n A 1 190 LEU 190 185 185 LEU LEU A . n A 1 191 GLU 191 186 186 GLU GLU A . n A 1 192 LEU 192 187 187 LEU LEU A . n A 1 193 LEU 193 188 188 LEU LEU A . n A 1 194 GLU 194 189 189 GLU GLU A . n A 1 195 VAL 195 190 190 VAL VAL A . n A 1 196 LEU 196 191 191 LEU LEU A . n A 1 197 TYR 197 192 192 TYR TYR A . n A 1 198 MET 198 193 193 MET MET A . n A 1 199 VAL 199 194 194 VAL VAL A . n A 1 200 LEU 200 195 195 LEU LEU A . n A 1 201 ARG 201 196 196 ARG ARG A . n A 1 202 ILE 202 197 197 ILE ILE A . n A 1 203 ILE 203 198 198 ILE ILE A . n A 1 204 ARG 204 199 199 ARG ARG A . n A 1 205 LEU 205 200 200 LEU LEU A . n A 1 206 ALA 206 201 201 ALA ALA A . n A 1 207 ILE 207 202 202 ILE ILE A . n A 1 208 GLU 208 203 203 GLU GLU A . n A 1 209 VAL 209 204 204 VAL VAL A . n A 1 210 GLU 210 205 205 GLU GLU A . n A 1 211 LYS 211 206 206 LYS LYS A . n A 1 212 LEU 212 207 207 LEU LEU A . n A 1 213 ALA 213 208 208 ALA ALA A . n A 1 214 LYS 214 209 209 LYS LYS A . n A 1 215 LYS 215 210 210 LYS LYS A . n A 1 216 ALA 216 211 211 ALA ALA A . n A 1 217 GLY 217 212 212 GLY GLY A . n A 1 218 ASP 218 213 213 ASP ASP A . n A 1 219 PRO 219 214 214 PRO PRO A . n A 1 220 SER 220 215 215 SER SER A . n A 1 221 ALA 221 216 216 ALA ALA A . n A 1 222 VAL 222 217 217 VAL VAL A . n A 1 223 GLU 223 218 218 GLU GLU A . n A 1 224 GLU 224 219 219 GLU GLU A . n A 1 225 ALA 225 220 220 ALA ALA A . n A 1 226 GLN 226 221 221 GLN GLN A . n A 1 227 ARG 227 222 222 ARG ARG A . n A 1 228 ILE 228 223 223 ILE ILE A . n A 1 229 LEU 229 224 224 LEU LEU A . n A 1 230 LYS 230 225 225 LYS LYS A . n A 1 231 GLN 231 226 226 GLN GLN A . n A 1 232 ALA 232 227 227 ALA ALA A . n A 1 233 LEU 233 228 228 LEU LEU A . n A 1 234 ARG 234 229 229 ARG ARG A . n A 1 235 LEU 235 230 230 LEU LEU A . n A 1 236 LEU 236 231 231 LEU LEU A . n A 1 237 LYS 237 232 232 LYS LYS A . n A 1 238 GLU 238 233 233 GLU GLU A . n A 1 239 ILE 239 234 234 ILE ILE A . n A 1 240 SER 240 235 235 SER SER A . n A 1 241 SER 241 236 236 SER SER A . n A 1 242 GLY 242 237 237 GLY GLY A . n A 1 243 ASP 243 238 238 ASP ASP A . n A 1 244 GLU 244 239 239 GLU GLU A . n A 1 245 GLN 245 240 240 GLN GLN A . n A 1 246 THR 246 241 241 THR THR A . n A 1 247 LEU 247 242 242 LEU LEU A . n A 1 248 ASP 248 243 243 ASP ASP A . n A 1 249 GLU 249 244 244 GLU GLU A . n A 1 250 ALA 250 245 245 ALA ALA A . n A 1 251 ALA 251 246 246 ALA ALA A . n A 1 252 LYS 252 247 247 LYS LYS A . n A 1 253 THR 253 248 248 THR THR A . n A 1 254 LEU 254 249 249 LEU LEU A . n A 1 255 SER 255 250 250 SER SER A . n A 1 256 PHE 256 251 251 PHE PHE A . n A 1 257 LEU 257 252 252 LEU LEU A . n A 1 258 ALA 258 253 253 ALA ALA A . n A 1 259 ALA 259 254 254 ALA ALA A . n A 1 260 GLU 260 255 255 GLU GLU A . n A 1 261 LEU 261 256 256 LEU LEU A . n A 1 262 GLU 262 257 257 GLU GLU A . n A 1 263 ALA 263 258 258 ALA ALA A . n A 1 264 ILE 264 259 259 ILE ILE A . n A 1 265 ALA 265 260 260 ALA ALA A . n A 1 266 PHE 266 261 261 PHE PHE A . n A 1 267 ALA 267 262 262 ALA ALA A . n A 1 268 ILE 268 263 263 ILE ILE A . n A 1 269 ARG 269 264 264 ARG ARG A . n A 1 270 VAL 270 265 265 VAL VAL A . n A 1 271 LYS 271 266 266 LYS LYS A . n A 1 272 TRP 272 267 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 301 2 HOH HOH A . B 2 HOH 2 302 1 HOH HOH A . B 2 HOH 3 303 3 HOH HOH A . B 2 HOH 4 304 5 HOH HOH A . B 2 HOH 5 305 4 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.17.1_3660 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7RMY _cell.details ? _cell.formula_units_Z ? _cell.length_a 90.723 _cell.length_a_esd ? _cell.length_b 90.723 _cell.length_b_esd ? _cell.length_c 108.709 _cell.length_c_esd ? _cell.volume 894747.115 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7RMY _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7RMY _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.72 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 66.95 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'PEG 4000, glycerol, magnesium chloride, calcium chloride, and bicine-Trizma base' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-03-19 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.99996 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 8.2.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.99996 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 8.2.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate 54.05 _reflns.entry_id 7RMY _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.17 _reflns.d_resolution_low 50.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 7677 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 94.04 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 14.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.905 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 3.17 _reflns_shell.d_res_low 3.28 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 591 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.939 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 64.56 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7RMY _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.17 _refine.ls_d_res_low 40.57 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7675 _refine.ls_number_reflns_R_free 768 _refine.ls_number_reflns_R_work 6907 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 94.08 _refine.ls_percent_reflns_R_free 10.01 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2395 _refine.ls_R_factor_R_free 0.2825 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2347 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'De novo Designed Model' _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 29.9725 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.4701 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 3.17 _refine_hist.d_res_low 40.57 _refine_hist.number_atoms_solvent 5 _refine_hist.number_atoms_total 2070 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2065 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # _refine_ls_restr.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_restr.criterion ? _refine_ls_restr.dev_ideal 12.8034 _refine_ls_restr.dev_ideal_target ? _refine_ls_restr.number 828 _refine_ls_restr.rejects ? _refine_ls_restr.type f_dihedral_angle_d _refine_ls_restr.weight ? _refine_ls_restr.pdbx_restraint_function ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 3.17 3.41 . . 129 1159 80.75 . . . 0.3474 . 0.3027 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.42 3.76 . . 147 1367 95.58 . . . 0.3566 . 0.3155 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.76 4.30 . . 160 1424 98.26 . . . 0.2780 . 0.2294 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.30 5.42 . . 164 1456 99.45 . . . 0.2431 . 0.1829 . . . . . . . . . . . # _struct.entry_id 7RMY _struct.title 'De Novo designed tunable protein pockets, D_3-337' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7RMY _struct_keywords.text 'DE NOVO DESIGN, Homodimer, repeat protein, tunable pocket, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7RMY _struct_ref.pdbx_db_accession 7RMY _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7RMY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 272 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 7RMY _struct_ref_seq.db_align_beg -4 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 267 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -4 _struct_ref_seq.pdbx_auth_seq_align_end 267 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 14410 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support SAXS _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 6 ? LEU A 33 ? SER A 1 LEU A 28 1 ? 28 HELX_P HELX_P2 AA2 LYS A 37 ? ARG A 55 ? LYS A 32 ARG A 50 1 ? 19 HELX_P HELX_P3 AA3 ARG A 65 ? LEU A 89 ? ARG A 60 LEU A 84 1 ? 25 HELX_P HELX_P4 AA4 PRO A 97 ? GLY A 120 ? PRO A 92 GLY A 115 1 ? 24 HELX_P HELX_P5 AA5 THR A 124 ? LYS A 153 ? THR A 119 LYS A 148 1 ? 30 HELX_P HELX_P6 AA6 ASP A 157 ? VAL A 178 ? ASP A 152 VAL A 173 1 ? 22 HELX_P HELX_P7 AA7 ASP A 182 ? ALA A 216 ? ASP A 177 ALA A 211 1 ? 35 HELX_P HELX_P8 AA8 ASP A 218 ? ARG A 234 ? ASP A 213 ARG A 229 1 ? 17 HELX_P HELX_P9 AA9 LEU A 235 ? GLU A 238 ? LEU A 230 GLU A 233 5 ? 4 HELX_P HELX_P10 AB1 ASP A 243 ? ARG A 269 ? ASP A 238 ARG A 264 1 ? 27 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 31 ? ? -93.52 41.25 2 1 GLU A 56 ? ? 59.96 7.69 3 1 LEU A 89 ? ? 62.21 -117.42 4 1 ASP A 91 ? ? -170.67 116.14 5 1 PRO A 92 ? ? -71.91 49.60 6 1 ASP A 116 ? ? 67.75 151.79 7 1 GLU A 149 ? ? -169.44 -44.05 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y+1/2,x+1/2,z+1/4 3 y+1/2,-x+1/2,z+3/4 4 x+1/2,-y+1/2,-z+3/4 5 -x+1/2,y+1/2,-z+1/4 6 -x,-y,z+1/2 7 y,x,-z 8 -y,-x,-z+1/2 # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -25.9770382674 _pdbx_refine_tls.origin_y -3.79424737195 _pdbx_refine_tls.origin_z -2.20209856019 _pdbx_refine_tls.T[1][1] 0.0978579626819 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.087737729463 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] 0.053385976252 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.0753975843558 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] 0.0329077268096 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.0849723415193 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 0.249856374049 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] 0.00546822633476 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -0.00422391800677 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 0.59699536332 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] -0.250172772597 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 0.329103341033 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.165775616093 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] 0.106949239203 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.160813339174 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] 0.15146736134 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] 0.038108548872 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] -0.337511250312 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.176117937306 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.0554191503241 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] -0.11536178307 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -4 ? A SER 1 2 1 Y 1 A GLY -3 ? A GLY 2 3 1 Y 1 A SER -2 ? A SER 3 4 1 Y 1 A GLY -1 ? A GLY 4 5 1 Y 1 A SER 0 ? A SER 5 6 1 Y 1 A TRP 267 ? A TRP 272 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 GLN N N N N 57 GLN CA C N S 58 GLN C C N N 59 GLN O O N N 60 GLN CB C N N 61 GLN CG C N N 62 GLN CD C N N 63 GLN OE1 O N N 64 GLN NE2 N N N 65 GLN OXT O N N 66 GLN H H N N 67 GLN H2 H N N 68 GLN HA H N N 69 GLN HB2 H N N 70 GLN HB3 H N N 71 GLN HG2 H N N 72 GLN HG3 H N N 73 GLN HE21 H N N 74 GLN HE22 H N N 75 GLN HXT H N N 76 GLU N N N N 77 GLU CA C N S 78 GLU C C N N 79 GLU O O N N 80 GLU CB C N N 81 GLU CG C N N 82 GLU CD C N N 83 GLU OE1 O N N 84 GLU OE2 O N N 85 GLU OXT O N N 86 GLU H H N N 87 GLU H2 H N N 88 GLU HA H N N 89 GLU HB2 H N N 90 GLU HB3 H N N 91 GLU HG2 H N N 92 GLU HG3 H N N 93 GLU HE2 H N N 94 GLU HXT H N N 95 GLY N N N N 96 GLY CA C N N 97 GLY C C N N 98 GLY O O N N 99 GLY OXT O N N 100 GLY H H N N 101 GLY H2 H N N 102 GLY HA2 H N N 103 GLY HA3 H N N 104 GLY HXT H N N 105 HOH O O N N 106 HOH H1 H N N 107 HOH H2 H N N 108 ILE N N N N 109 ILE CA C N S 110 ILE C C N N 111 ILE O O N N 112 ILE CB C N S 113 ILE CG1 C N N 114 ILE CG2 C N N 115 ILE CD1 C N N 116 ILE OXT O N N 117 ILE H H N N 118 ILE H2 H N N 119 ILE HA H N N 120 ILE HB H N N 121 ILE HG12 H N N 122 ILE HG13 H N N 123 ILE HG21 H N N 124 ILE HG22 H N N 125 ILE HG23 H N N 126 ILE HD11 H N N 127 ILE HD12 H N N 128 ILE HD13 H N N 129 ILE HXT H N N 130 LEU N N N N 131 LEU CA C N S 132 LEU C C N N 133 LEU O O N N 134 LEU CB C N N 135 LEU CG C N N 136 LEU CD1 C N N 137 LEU CD2 C N N 138 LEU OXT O N N 139 LEU H H N N 140 LEU H2 H N N 141 LEU HA H N N 142 LEU HB2 H N N 143 LEU HB3 H N N 144 LEU HG H N N 145 LEU HD11 H N N 146 LEU HD12 H N N 147 LEU HD13 H N N 148 LEU HD21 H N N 149 LEU HD22 H N N 150 LEU HD23 H N N 151 LEU HXT H N N 152 LYS N N N N 153 LYS CA C N S 154 LYS C C N N 155 LYS O O N N 156 LYS CB C N N 157 LYS CG C N N 158 LYS CD C N N 159 LYS CE C N N 160 LYS NZ N N N 161 LYS OXT O N N 162 LYS H H N N 163 LYS H2 H N N 164 LYS HA H N N 165 LYS HB2 H N N 166 LYS HB3 H N N 167 LYS HG2 H N N 168 LYS HG3 H N N 169 LYS HD2 H N N 170 LYS HD3 H N N 171 LYS HE2 H N N 172 LYS HE3 H N N 173 LYS HZ1 H N N 174 LYS HZ2 H N N 175 LYS HZ3 H N N 176 LYS HXT H N N 177 MET N N N N 178 MET CA C N S 179 MET C C N N 180 MET O O N N 181 MET CB C N N 182 MET CG C N N 183 MET SD S N N 184 MET CE C N N 185 MET OXT O N N 186 MET H H N N 187 MET H2 H N N 188 MET HA H N N 189 MET HB2 H N N 190 MET HB3 H N N 191 MET HG2 H N N 192 MET HG3 H N N 193 MET HE1 H N N 194 MET HE2 H N N 195 MET HE3 H N N 196 MET HXT H N N 197 PHE N N N N 198 PHE CA C N S 199 PHE C C N N 200 PHE O O N N 201 PHE CB C N N 202 PHE CG C Y N 203 PHE CD1 C Y N 204 PHE CD2 C Y N 205 PHE CE1 C Y N 206 PHE CE2 C Y N 207 PHE CZ C Y N 208 PHE OXT O N N 209 PHE H H N N 210 PHE H2 H N N 211 PHE HA H N N 212 PHE HB2 H N N 213 PHE HB3 H N N 214 PHE HD1 H N N 215 PHE HD2 H N N 216 PHE HE1 H N N 217 PHE HE2 H N N 218 PHE HZ H N N 219 PHE HXT H N N 220 PRO N N N N 221 PRO CA C N S 222 PRO C C N N 223 PRO O O N N 224 PRO CB C N N 225 PRO CG C N N 226 PRO CD C N N 227 PRO OXT O N N 228 PRO H H N N 229 PRO HA H N N 230 PRO HB2 H N N 231 PRO HB3 H N N 232 PRO HG2 H N N 233 PRO HG3 H N N 234 PRO HD2 H N N 235 PRO HD3 H N N 236 PRO HXT H N N 237 SER N N N N 238 SER CA C N S 239 SER C C N N 240 SER O O N N 241 SER CB C N N 242 SER OG O N N 243 SER OXT O N N 244 SER H H N N 245 SER H2 H N N 246 SER HA H N N 247 SER HB2 H N N 248 SER HB3 H N N 249 SER HG H N N 250 SER HXT H N N 251 THR N N N N 252 THR CA C N S 253 THR C C N N 254 THR O O N N 255 THR CB C N R 256 THR OG1 O N N 257 THR CG2 C N N 258 THR OXT O N N 259 THR H H N N 260 THR H2 H N N 261 THR HA H N N 262 THR HB H N N 263 THR HG1 H N N 264 THR HG21 H N N 265 THR HG22 H N N 266 THR HG23 H N N 267 THR HXT H N N 268 TRP N N N N 269 TRP CA C N S 270 TRP C C N N 271 TRP O O N N 272 TRP CB C N N 273 TRP CG C Y N 274 TRP CD1 C Y N 275 TRP CD2 C Y N 276 TRP NE1 N Y N 277 TRP CE2 C Y N 278 TRP CE3 C Y N 279 TRP CZ2 C Y N 280 TRP CZ3 C Y N 281 TRP CH2 C Y N 282 TRP OXT O N N 283 TRP H H N N 284 TRP H2 H N N 285 TRP HA H N N 286 TRP HB2 H N N 287 TRP HB3 H N N 288 TRP HD1 H N N 289 TRP HE1 H N N 290 TRP HE3 H N N 291 TRP HZ2 H N N 292 TRP HZ3 H N N 293 TRP HH2 H N N 294 TRP HXT H N N 295 TYR N N N N 296 TYR CA C N S 297 TYR C C N N 298 TYR O O N N 299 TYR CB C N N 300 TYR CG C Y N 301 TYR CD1 C Y N 302 TYR CD2 C Y N 303 TYR CE1 C Y N 304 TYR CE2 C Y N 305 TYR CZ C Y N 306 TYR OH O N N 307 TYR OXT O N N 308 TYR H H N N 309 TYR H2 H N N 310 TYR HA H N N 311 TYR HB2 H N N 312 TYR HB3 H N N 313 TYR HD1 H N N 314 TYR HD2 H N N 315 TYR HE1 H N N 316 TYR HE2 H N N 317 TYR HH H N N 318 TYR HXT H N N 319 VAL N N N N 320 VAL CA C N S 321 VAL C C N N 322 VAL O O N N 323 VAL CB C N N 324 VAL CG1 C N N 325 VAL CG2 C N N 326 VAL OXT O N N 327 VAL H H N N 328 VAL H2 H N N 329 VAL HA H N N 330 VAL HB H N N 331 VAL HG11 H N N 332 VAL HG12 H N N 333 VAL HG13 H N N 334 VAL HG21 H N N 335 VAL HG22 H N N 336 VAL HG23 H N N 337 VAL HXT H N N 338 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 GLN N CA sing N N 54 GLN N H sing N N 55 GLN N H2 sing N N 56 GLN CA C sing N N 57 GLN CA CB sing N N 58 GLN CA HA sing N N 59 GLN C O doub N N 60 GLN C OXT sing N N 61 GLN CB CG sing N N 62 GLN CB HB2 sing N N 63 GLN CB HB3 sing N N 64 GLN CG CD sing N N 65 GLN CG HG2 sing N N 66 GLN CG HG3 sing N N 67 GLN CD OE1 doub N N 68 GLN CD NE2 sing N N 69 GLN NE2 HE21 sing N N 70 GLN NE2 HE22 sing N N 71 GLN OXT HXT sing N N 72 GLU N CA sing N N 73 GLU N H sing N N 74 GLU N H2 sing N N 75 GLU CA C sing N N 76 GLU CA CB sing N N 77 GLU CA HA sing N N 78 GLU C O doub N N 79 GLU C OXT sing N N 80 GLU CB CG sing N N 81 GLU CB HB2 sing N N 82 GLU CB HB3 sing N N 83 GLU CG CD sing N N 84 GLU CG HG2 sing N N 85 GLU CG HG3 sing N N 86 GLU CD OE1 doub N N 87 GLU CD OE2 sing N N 88 GLU OE2 HE2 sing N N 89 GLU OXT HXT sing N N 90 GLY N CA sing N N 91 GLY N H sing N N 92 GLY N H2 sing N N 93 GLY CA C sing N N 94 GLY CA HA2 sing N N 95 GLY CA HA3 sing N N 96 GLY C O doub N N 97 GLY C OXT sing N N 98 GLY OXT HXT sing N N 99 HOH O H1 sing N N 100 HOH O H2 sing N N 101 ILE N CA sing N N 102 ILE N H sing N N 103 ILE N H2 sing N N 104 ILE CA C sing N N 105 ILE CA CB sing N N 106 ILE CA HA sing N N 107 ILE C O doub N N 108 ILE C OXT sing N N 109 ILE CB CG1 sing N N 110 ILE CB CG2 sing N N 111 ILE CB HB sing N N 112 ILE CG1 CD1 sing N N 113 ILE CG1 HG12 sing N N 114 ILE CG1 HG13 sing N N 115 ILE CG2 HG21 sing N N 116 ILE CG2 HG22 sing N N 117 ILE CG2 HG23 sing N N 118 ILE CD1 HD11 sing N N 119 ILE CD1 HD12 sing N N 120 ILE CD1 HD13 sing N N 121 ILE OXT HXT sing N N 122 LEU N CA sing N N 123 LEU N H sing N N 124 LEU N H2 sing N N 125 LEU CA C sing N N 126 LEU CA CB sing N N 127 LEU CA HA sing N N 128 LEU C O doub N N 129 LEU C OXT sing N N 130 LEU CB CG sing N N 131 LEU CB HB2 sing N N 132 LEU CB HB3 sing N N 133 LEU CG CD1 sing N N 134 LEU CG CD2 sing N N 135 LEU CG HG sing N N 136 LEU CD1 HD11 sing N N 137 LEU CD1 HD12 sing N N 138 LEU CD1 HD13 sing N N 139 LEU CD2 HD21 sing N N 140 LEU CD2 HD22 sing N N 141 LEU CD2 HD23 sing N N 142 LEU OXT HXT sing N N 143 LYS N CA sing N N 144 LYS N H sing N N 145 LYS N H2 sing N N 146 LYS CA C sing N N 147 LYS CA CB sing N N 148 LYS CA HA sing N N 149 LYS C O doub N N 150 LYS C OXT sing N N 151 LYS CB CG sing N N 152 LYS CB HB2 sing N N 153 LYS CB HB3 sing N N 154 LYS CG CD sing N N 155 LYS CG HG2 sing N N 156 LYS CG HG3 sing N N 157 LYS CD CE sing N N 158 LYS CD HD2 sing N N 159 LYS CD HD3 sing N N 160 LYS CE NZ sing N N 161 LYS CE HE2 sing N N 162 LYS CE HE3 sing N N 163 LYS NZ HZ1 sing N N 164 LYS NZ HZ2 sing N N 165 LYS NZ HZ3 sing N N 166 LYS OXT HXT sing N N 167 MET N CA sing N N 168 MET N H sing N N 169 MET N H2 sing N N 170 MET CA C sing N N 171 MET CA CB sing N N 172 MET CA HA sing N N 173 MET C O doub N N 174 MET C OXT sing N N 175 MET CB CG sing N N 176 MET CB HB2 sing N N 177 MET CB HB3 sing N N 178 MET CG SD sing N N 179 MET CG HG2 sing N N 180 MET CG HG3 sing N N 181 MET SD CE sing N N 182 MET CE HE1 sing N N 183 MET CE HE2 sing N N 184 MET CE HE3 sing N N 185 MET OXT HXT sing N N 186 PHE N CA sing N N 187 PHE N H sing N N 188 PHE N H2 sing N N 189 PHE CA C sing N N 190 PHE CA CB sing N N 191 PHE CA HA sing N N 192 PHE C O doub N N 193 PHE C OXT sing N N 194 PHE CB CG sing N N 195 PHE CB HB2 sing N N 196 PHE CB HB3 sing N N 197 PHE CG CD1 doub Y N 198 PHE CG CD2 sing Y N 199 PHE CD1 CE1 sing Y N 200 PHE CD1 HD1 sing N N 201 PHE CD2 CE2 doub Y N 202 PHE CD2 HD2 sing N N 203 PHE CE1 CZ doub Y N 204 PHE CE1 HE1 sing N N 205 PHE CE2 CZ sing Y N 206 PHE CE2 HE2 sing N N 207 PHE CZ HZ sing N N 208 PHE OXT HXT sing N N 209 PRO N CA sing N N 210 PRO N CD sing N N 211 PRO N H sing N N 212 PRO CA C sing N N 213 PRO CA CB sing N N 214 PRO CA HA sing N N 215 PRO C O doub N N 216 PRO C OXT sing N N 217 PRO CB CG sing N N 218 PRO CB HB2 sing N N 219 PRO CB HB3 sing N N 220 PRO CG CD sing N N 221 PRO CG HG2 sing N N 222 PRO CG HG3 sing N N 223 PRO CD HD2 sing N N 224 PRO CD HD3 sing N N 225 PRO OXT HXT sing N N 226 SER N CA sing N N 227 SER N H sing N N 228 SER N H2 sing N N 229 SER CA C sing N N 230 SER CA CB sing N N 231 SER CA HA sing N N 232 SER C O doub N N 233 SER C OXT sing N N 234 SER CB OG sing N N 235 SER CB HB2 sing N N 236 SER CB HB3 sing N N 237 SER OG HG sing N N 238 SER OXT HXT sing N N 239 THR N CA sing N N 240 THR N H sing N N 241 THR N H2 sing N N 242 THR CA C sing N N 243 THR CA CB sing N N 244 THR CA HA sing N N 245 THR C O doub N N 246 THR C OXT sing N N 247 THR CB OG1 sing N N 248 THR CB CG2 sing N N 249 THR CB HB sing N N 250 THR OG1 HG1 sing N N 251 THR CG2 HG21 sing N N 252 THR CG2 HG22 sing N N 253 THR CG2 HG23 sing N N 254 THR OXT HXT sing N N 255 TRP N CA sing N N 256 TRP N H sing N N 257 TRP N H2 sing N N 258 TRP CA C sing N N 259 TRP CA CB sing N N 260 TRP CA HA sing N N 261 TRP C O doub N N 262 TRP C OXT sing N N 263 TRP CB CG sing N N 264 TRP CB HB2 sing N N 265 TRP CB HB3 sing N N 266 TRP CG CD1 doub Y N 267 TRP CG CD2 sing Y N 268 TRP CD1 NE1 sing Y N 269 TRP CD1 HD1 sing N N 270 TRP CD2 CE2 doub Y N 271 TRP CD2 CE3 sing Y N 272 TRP NE1 CE2 sing Y N 273 TRP NE1 HE1 sing N N 274 TRP CE2 CZ2 sing Y N 275 TRP CE3 CZ3 doub Y N 276 TRP CE3 HE3 sing N N 277 TRP CZ2 CH2 doub Y N 278 TRP CZ2 HZ2 sing N N 279 TRP CZ3 CH2 sing Y N 280 TRP CZ3 HZ3 sing N N 281 TRP CH2 HH2 sing N N 282 TRP OXT HXT sing N N 283 TYR N CA sing N N 284 TYR N H sing N N 285 TYR N H2 sing N N 286 TYR CA C sing N N 287 TYR CA CB sing N N 288 TYR CA HA sing N N 289 TYR C O doub N N 290 TYR C OXT sing N N 291 TYR CB CG sing N N 292 TYR CB HB2 sing N N 293 TYR CB HB3 sing N N 294 TYR CG CD1 doub Y N 295 TYR CG CD2 sing Y N 296 TYR CD1 CE1 sing Y N 297 TYR CD1 HD1 sing N N 298 TYR CD2 CE2 doub Y N 299 TYR CD2 HD2 sing N N 300 TYR CE1 CZ doub Y N 301 TYR CE1 HE1 sing N N 302 TYR CE2 CZ sing Y N 303 TYR CE2 HE2 sing N N 304 TYR CZ OH sing N N 305 TYR OH HH sing N N 306 TYR OXT HXT sing N N 307 VAL N CA sing N N 308 VAL N H sing N N 309 VAL N H2 sing N N 310 VAL CA C sing N N 311 VAL CA CB sing N N 312 VAL CA HA sing N N 313 VAL C O doub N N 314 VAL C OXT sing N N 315 VAL CB CG1 sing N N 316 VAL CB CG2 sing N N 317 VAL CB HB sing N N 318 VAL CG1 HG11 sing N N 319 VAL CG1 HG12 sing N N 320 VAL CG1 HG13 sing N N 321 VAL CG2 HG21 sing N N 322 VAL CG2 HG22 sing N N 323 VAL CG2 HG23 sing N N 324 VAL OXT HXT sing N N 325 # _pdbx_audit_support.funding_organization 'Howard Hughes Medical Institute (HHMI)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'De novo Designed Model' # _space_group.name_H-M_alt 'P 41 21 2' _space_group.name_Hall 'P 4abw 2nw' _space_group.IT_number 92 _space_group.crystal_system tetragonal _space_group.id 1 # _atom_sites.entry_id 7RMY _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.011023 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011023 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009199 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 6.96715 ? ? ? 11.43723 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_