HEADER TRANSCRIPTION 29-JUL-21 7RNM TITLE ESTROGEN RECEPTOR ALPHA LIGAND BINDING DOMAIN Y537S MUTANT IN COMPLEX TITLE 2 WITH 2-(2-CHLORO-5-PHENYLTHIENO[2,3-D]PYRIMIDIN-4-YL)ISOINDOLIN-5-OL TITLE 3 AND GRIP PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTROGEN RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ER,ER-ALPHA,ESTRADIOL RECEPTOR,NUCLEAR RECEPTOR SUBFAMILY 3 COMPND 5 GROUP A MEMBER 1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NUCLEAR RECEPTOR COACTIVATOR 2; COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ESR1, ESR, NR3A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: NCOA2; SOURCE 13 EXPRESSION_SYSTEM: SYNTHETIC CONSTRUCT; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 32630 KEYWDS BREAST CANCER, ESTROGEN RECEPTOR, ALPHA HELICAL BUNDLE, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR C.JOINER,V.K.R.SAMMETA,J.D.NORRIS,D.P.MCDONNELL,T.M.WILLSON, AUTHOR 2 S.W.FANNING REVDAT 4 14-FEB-24 7RNM 1 JRNL REVDAT 3 18-OCT-23 7RNM 1 REMARK REVDAT 2 10-AUG-22 7RNM 1 REMARK REVDAT 1 03-AUG-22 7RNM 0 JRNL AUTH V.REDDY SAMMETA,B.M.ANDERSON,J.D.NORRIS,C.D.TORRICE, JRNL AUTH 2 C.JOINER,S.LIU,H.LI,K.I.POPOV,S.W.FANNING,D.P.MCDONNELL, JRNL AUTH 3 T.M.WILLSON JRNL TITL STRUCTURAL DETERMINANTS OF THE BINDING AND ACTIVATION OF JRNL TITL 2 ESTROGEN RECEPTOR ALPHA BY PHENOLIC THIENO[2,3-D]PYRIMIDINES JRNL REF HELV.CHIM.ACTA V. 106 2023 JRNL REFN ISSN 0018-019X JRNL DOI 10.1002/HLCA.202300097 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.2 REMARK 3 NUMBER OF REFLECTIONS : 36066 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1804 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.4400 - 4.4800 0.99 2952 174 0.1893 0.1966 REMARK 3 2 4.4800 - 3.5500 1.00 2958 147 0.1594 0.1963 REMARK 3 3 3.5500 - 3.1100 1.00 2905 148 0.1799 0.2046 REMARK 3 4 3.1000 - 2.8200 1.00 2920 159 0.1815 0.2287 REMARK 3 5 2.8200 - 2.6200 1.00 2964 130 0.1913 0.2330 REMARK 3 6 2.6200 - 2.4600 1.00 2909 157 0.1832 0.2333 REMARK 3 7 2.4600 - 2.3400 1.00 2895 166 0.1798 0.2522 REMARK 3 8 2.3400 - 2.2400 1.00 2895 151 0.1887 0.1926 REMARK 3 9 2.2400 - 2.1500 0.99 2889 152 0.1918 0.2373 REMARK 3 10 2.1500 - 2.0800 0.95 2759 140 0.2012 0.2614 REMARK 3 11 2.0800 - 2.0100 0.87 2522 141 0.2145 0.2459 REMARK 3 12 2.0100 - 1.9600 0.58 1704 77 0.2478 0.3187 REMARK 3 13 1.9600 - 1.9000 0.35 990 62 0.2735 0.3648 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.770 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 474 THROUGH 496 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.3705 6.6215 23.0944 REMARK 3 T TENSOR REMARK 3 T11: 0.0679 T22: 0.2999 REMARK 3 T33: 0.1604 T12: -0.0523 REMARK 3 T13: -0.0531 T23: -0.0376 REMARK 3 L TENSOR REMARK 3 L11: 2.8298 L22: 1.3654 REMARK 3 L33: 3.3668 L12: -0.6271 REMARK 3 L13: 0.6169 L23: -1.0235 REMARK 3 S TENSOR REMARK 3 S11: 0.0252 S12: -0.5772 S13: 0.1984 REMARK 3 S21: 0.3376 S22: 0.0057 S23: -0.1146 REMARK 3 S31: -0.3006 S32: 0.2886 S33: 0.3166 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 497 THROUGH 530 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.6403 -1.3341 14.0347 REMARK 3 T TENSOR REMARK 3 T11: 0.0970 T22: 0.1133 REMARK 3 T33: 0.0515 T12: 0.0084 REMARK 3 T13: 0.0104 T23: 0.0088 REMARK 3 L TENSOR REMARK 3 L11: 2.1912 L22: 1.4990 REMARK 3 L33: 1.7514 L12: -0.1375 REMARK 3 L13: 1.2997 L23: -0.3248 REMARK 3 S TENSOR REMARK 3 S11: -0.1208 S12: -0.1870 S13: -0.2996 REMARK 3 S21: -0.0445 S22: 0.1149 S23: 0.0510 REMARK 3 S31: 0.0727 S32: -0.0309 S33: 0.0185 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 531 THROUGH 547 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.4161 6.4397 17.4412 REMARK 3 T TENSOR REMARK 3 T11: 0.0921 T22: 0.2120 REMARK 3 T33: 0.2971 T12: 0.0600 REMARK 3 T13: 0.0103 T23: -0.0122 REMARK 3 L TENSOR REMARK 3 L11: 6.7021 L22: 3.7513 REMARK 3 L33: 2.8843 L12: 4.9758 REMARK 3 L13: 1.8577 L23: 1.0125 REMARK 3 S TENSOR REMARK 3 S11: 0.0995 S12: 0.1017 S13: -0.2459 REMARK 3 S21: -0.1919 S22: -0.1516 S23: 0.1332 REMARK 3 S31: -0.2408 S32: -0.1747 S33: -0.0325 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 688 THROUGH 695 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5550 -14.3140 -10.6423 REMARK 3 T TENSOR REMARK 3 T11: 0.6131 T22: 0.2729 REMARK 3 T33: 0.3011 T12: -0.1821 REMARK 3 T13: 0.0474 T23: -0.0603 REMARK 3 L TENSOR REMARK 3 L11: 5.4377 L22: 5.1026 REMARK 3 L33: 7.4382 L12: -0.3402 REMARK 3 L13: 5.7530 L23: -2.3599 REMARK 3 S TENSOR REMARK 3 S11: 0.1858 S12: 0.4942 S13: -0.9640 REMARK 3 S21: -1.0533 S22: 0.3482 S23: -0.0601 REMARK 3 S31: 0.7791 S32: -0.1307 S33: -0.3718 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 688 THROUGH 696 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.7119 18.1926 26.2418 REMARK 3 T TENSOR REMARK 3 T11: 0.2939 T22: 0.1805 REMARK 3 T33: 0.3731 T12: 0.0452 REMARK 3 T13: 0.1076 T23: -0.0437 REMARK 3 L TENSOR REMARK 3 L11: 2.6785 L22: 5.6448 REMARK 3 L33: 6.3282 L12: -1.6573 REMARK 3 L13: -3.2403 L23: 3.0272 REMARK 3 S TENSOR REMARK 3 S11: 0.0943 S12: 0.0230 S13: 0.9510 REMARK 3 S21: 0.3260 S22: -0.1732 S23: 0.2387 REMARK 3 S31: -0.7394 S32: -0.6417 S33: -0.0606 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 307 THROUGH 340 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.7506 -0.8349 -6.7403 REMARK 3 T TENSOR REMARK 3 T11: 0.2298 T22: 0.3746 REMARK 3 T33: 0.1865 T12: -0.0154 REMARK 3 T13: 0.0756 T23: -0.0313 REMARK 3 L TENSOR REMARK 3 L11: 4.2009 L22: 1.6944 REMARK 3 L33: 2.4459 L12: 0.4843 REMARK 3 L13: 1.6031 L23: 0.1737 REMARK 3 S TENSOR REMARK 3 S11: -0.0579 S12: 0.1924 S13: -0.5519 REMARK 3 S21: -0.3723 S22: 0.2915 S23: -0.2119 REMARK 3 S31: 0.0848 S32: 0.2783 S33: -0.0756 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 341 THROUGH 394 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.5161 -3.3574 -6.2210 REMARK 3 T TENSOR REMARK 3 T11: 0.2424 T22: 0.1131 REMARK 3 T33: 0.0903 T12: -0.0314 REMARK 3 T13: 0.0373 T23: -0.0169 REMARK 3 L TENSOR REMARK 3 L11: 3.1997 L22: 2.4379 REMARK 3 L33: 2.7313 L12: 0.8688 REMARK 3 L13: 0.6964 L23: 0.5686 REMARK 3 S TENSOR REMARK 3 S11: -0.0560 S12: 0.1513 S13: -0.2240 REMARK 3 S21: -0.2261 S22: 0.0797 S23: 0.0908 REMARK 3 S31: 0.2610 S32: -0.0118 S33: -0.0166 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 395 THROUGH 421 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.3619 16.3120 -8.3488 REMARK 3 T TENSOR REMARK 3 T11: 0.6965 T22: 0.2254 REMARK 3 T33: 0.2008 T12: -0.0033 REMARK 3 T13: -0.0892 T23: 0.0813 REMARK 3 L TENSOR REMARK 3 L11: 0.7513 L22: 1.4257 REMARK 3 L33: 3.0920 L12: 0.7502 REMARK 3 L13: -0.5113 L23: -1.3036 REMARK 3 S TENSOR REMARK 3 S11: -0.1151 S12: 0.1869 S13: 0.3252 REMARK 3 S21: -0.0091 S22: 0.1922 S23: 0.1714 REMARK 3 S31: -0.7563 S32: -0.3022 S33: -0.3324 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 422 THROUGH 438 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9338 14.6429 2.3563 REMARK 3 T TENSOR REMARK 3 T11: 0.4571 T22: 0.1544 REMARK 3 T33: 0.2501 T12: 0.1010 REMARK 3 T13: -0.0283 T23: 0.0060 REMARK 3 L TENSOR REMARK 3 L11: 6.0334 L22: 3.1818 REMARK 3 L33: 3.8541 L12: -0.3716 REMARK 3 L13: 1.9254 L23: -0.6648 REMARK 3 S TENSOR REMARK 3 S11: -0.5171 S12: -0.1507 S13: 0.7823 REMARK 3 S21: 0.6144 S22: 0.2659 S23: 0.1781 REMARK 3 S31: -0.8578 S32: -0.2265 S33: 0.1835 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 439 THROUGH 496 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.7719 -1.7812 5.6445 REMARK 3 T TENSOR REMARK 3 T11: 0.0806 T22: 0.1498 REMARK 3 T33: 0.1028 T12: -0.0027 REMARK 3 T13: 0.0363 T23: -0.0185 REMARK 3 L TENSOR REMARK 3 L11: 3.5369 L22: 1.7780 REMARK 3 L33: 3.6545 L12: -0.8147 REMARK 3 L13: 1.4531 L23: 0.8203 REMARK 3 S TENSOR REMARK 3 S11: -0.0506 S12: 0.0823 S13: -0.1995 REMARK 3 S21: -0.0784 S22: -0.0119 S23: -0.1083 REMARK 3 S31: 0.1860 S32: 0.2530 S33: 0.0430 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 497 THROUGH 530 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.3228 4.8437 6.2583 REMARK 3 T TENSOR REMARK 3 T11: 0.0871 T22: 0.1055 REMARK 3 T33: 0.0590 T12: 0.0173 REMARK 3 T13: 0.0172 T23: 0.0049 REMARK 3 L TENSOR REMARK 3 L11: 4.8927 L22: 2.3090 REMARK 3 L33: 3.0863 L12: 1.0189 REMARK 3 L13: 1.7733 L23: 0.5788 REMARK 3 S TENSOR REMARK 3 S11: -0.2360 S12: 0.1771 S13: 0.2545 REMARK 3 S21: -0.1570 S22: 0.0509 S23: 0.1691 REMARK 3 S31: -0.2042 S32: -0.1810 S33: 0.1906 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 531 THROUGH 547 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.6865 -4.0810 -9.1954 REMARK 3 T TENSOR REMARK 3 T11: 0.3845 T22: 0.4271 REMARK 3 T33: 0.3488 T12: -0.0913 REMARK 3 T13: -0.0958 T23: 0.0623 REMARK 3 L TENSOR REMARK 3 L11: 2.2138 L22: 1.9857 REMARK 3 L33: 0.5910 L12: 0.2815 REMARK 3 L13: 0.7220 L23: 0.1046 REMARK 3 S TENSOR REMARK 3 S11: 0.1955 S12: -0.1113 S13: -0.2919 REMARK 3 S21: 0.3537 S22: -0.1452 S23: 0.2029 REMARK 3 S31: -0.1989 S32: -0.5365 S33: -0.0717 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 307 THROUGH 338 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.8650 1.3014 31.8372 REMARK 3 T TENSOR REMARK 3 T11: 0.2384 T22: 0.1872 REMARK 3 T33: 0.1136 T12: 0.0157 REMARK 3 T13: 0.0097 T23: -0.0285 REMARK 3 L TENSOR REMARK 3 L11: 4.9100 L22: 1.6936 REMARK 3 L33: 1.6197 L12: 1.2117 REMARK 3 L13: 0.0034 L23: 0.2310 REMARK 3 S TENSOR REMARK 3 S11: 0.0696 S12: -0.5272 S13: 0.3731 REMARK 3 S21: 0.2703 S22: -0.0652 S23: 0.2156 REMARK 3 S31: 0.0078 S32: 0.2133 S33: -0.0411 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 339 THROUGH 363 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.1821 3.0207 27.0752 REMARK 3 T TENSOR REMARK 3 T11: 0.0856 T22: 0.1307 REMARK 3 T33: 0.1421 T12: 0.0244 REMARK 3 T13: 0.0402 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 6.9341 L22: 6.4670 REMARK 3 L33: 2.8095 L12: 4.9306 REMARK 3 L13: 1.3345 L23: 1.5064 REMARK 3 S TENSOR REMARK 3 S11: 0.1703 S12: -0.2328 S13: -0.0971 REMARK 3 S21: 0.2564 S22: -0.1145 S23: 0.1842 REMARK 3 S31: -0.1133 S32: -0.3150 S33: -0.0091 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 364 THROUGH 420 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.8086 -0.2839 22.8238 REMARK 3 T TENSOR REMARK 3 T11: 0.0385 T22: 0.0776 REMARK 3 T33: 0.0814 T12: 0.0083 REMARK 3 T13: 0.0237 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 2.0363 L22: 3.4096 REMARK 3 L33: 2.3701 L12: 0.3690 REMARK 3 L13: -0.2671 L23: 0.0092 REMARK 3 S TENSOR REMARK 3 S11: 0.0824 S12: -0.0378 S13: -0.0405 REMARK 3 S21: 0.1202 S22: -0.0633 S23: 0.0243 REMARK 3 S31: 0.0482 S32: 0.0023 S33: 0.0206 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 421 THROUGH 437 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.9146 -10.7506 17.5795 REMARK 3 T TENSOR REMARK 3 T11: 0.1623 T22: 0.1046 REMARK 3 T33: 0.1491 T12: 0.0045 REMARK 3 T13: 0.0287 T23: -0.0251 REMARK 3 L TENSOR REMARK 3 L11: 3.0116 L22: 5.8904 REMARK 3 L33: 5.9379 L12: -0.0319 REMARK 3 L13: 3.5934 L23: -0.0936 REMARK 3 S TENSOR REMARK 3 S11: 0.0393 S12: 0.4572 S13: -0.3254 REMARK 3 S21: -0.3221 S22: -0.1216 S23: -0.0891 REMARK 3 S31: 0.3057 S32: 0.0778 S33: 0.0179 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 438 THROUGH 473 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.2025 4.7805 21.3011 REMARK 3 T TENSOR REMARK 3 T11: 0.0394 T22: 0.1047 REMARK 3 T33: 0.0849 T12: -0.0253 REMARK 3 T13: 0.0357 T23: -0.0375 REMARK 3 L TENSOR REMARK 3 L11: 3.5277 L22: 5.1552 REMARK 3 L33: 3.7293 L12: 0.6045 REMARK 3 L13: -0.3754 L23: -0.2184 REMARK 3 S TENSOR REMARK 3 S11: 0.0280 S12: -0.1820 S13: 0.1487 REMARK 3 S21: 0.1363 S22: 0.0836 S23: -0.1791 REMARK 3 S31: -0.3644 S32: 0.2267 S33: -0.0829 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7RNM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUL-21. REMARK 100 THE DEPOSITION ID IS D_1000258638. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUL-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39739 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3785.000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 6D0F REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, MGCL2, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.72800 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 305 REMARK 465 LEU A 306 REMARK 465 TYR A 331 REMARK 465 ASP A 332 REMARK 465 PRO A 333 REMARK 465 THR A 334 REMARK 465 ARG A 335 REMARK 465 PRO A 336 REMARK 465 PHE A 337 REMARK 465 SER A 338 REMARK 465 GLU A 339 REMARK 465 LYS A 416 REMARK 465 CYS A 417 REMARK 465 VAL A 418 REMARK 465 GLU A 419 REMARK 465 GLY A 420 REMARK 465 PHE A 461 REMARK 465 LEU A 462 REMARK 465 SER A 463 REMARK 465 SER A 464 REMARK 465 THR A 465 REMARK 465 LEU A 466 REMARK 465 LYS A 467 REMARK 465 SER A 468 REMARK 465 ARG A 548 REMARK 465 LEU A 549 REMARK 465 HIS A 550 REMARK 465 ALA A 551 REMARK 465 PRO A 552 REMARK 465 THR A 553 REMARK 465 SER A 554 REMARK 465 SER B 305 REMARK 465 LEU B 306 REMARK 465 PHE B 461 REMARK 465 LEU B 462 REMARK 465 SER B 463 REMARK 465 SER B 464 REMARK 465 THR B 465 REMARK 465 LEU B 466 REMARK 465 LYS B 467 REMARK 465 SER B 468 REMARK 465 LEU B 469 REMARK 465 GLU B 470 REMARK 465 GLU B 471 REMARK 465 LYS B 472 REMARK 465 ARG B 548 REMARK 465 LEU B 549 REMARK 465 HIS B 550 REMARK 465 ALA B 551 REMARK 465 PRO B 552 REMARK 465 THR B 553 REMARK 465 SER B 554 REMARK 465 HIS C 687 REMARK 465 ASP C 696 REMARK 465 HIS D 687 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 310 CD1 CD2 REMARK 470 ASP A 321 CG OD1 OD2 REMARK 470 GLU A 330 CG CD OE1 OE2 REMARK 470 MET A 342 CG SD CE REMARK 470 MET A 343 CG SD CE REMARK 470 LYS A 362 CD CE NZ REMARK 470 LEU A 372 CG CD1 CD2 REMARK 470 LYS A 401 CG CD CE NZ REMARK 470 ASP A 411 CG OD1 OD2 REMARK 470 ASN A 413 CG OD1 ND2 REMARK 470 MET A 421 CG SD CE REMARK 470 GLU A 423 CG CD OE1 OE2 REMARK 470 TYR A 459 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU A 469 CG CD1 CD2 REMARK 470 GLU A 470 CG CD OE1 OE2 REMARK 470 GLU A 471 CG CD OE1 OE2 REMARK 470 LYS A 472 CG CD CE NZ REMARK 470 ASP A 473 CG OD1 OD2 REMARK 470 ARG A 477 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 481 CG CD CE NZ REMARK 470 LYS A 492 CG CD CE NZ REMARK 470 GLU A 523 CG CD OE1 OE2 REMARK 470 LYS A 531 CD CE NZ REMARK 470 ASP A 545 CG OD1 OD2 REMARK 470 ASP B 321 CG OD1 OD2 REMARK 470 ASP B 332 CG OD1 OD2 REMARK 470 ARG B 335 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 416 CG CD CE NZ REMARK 470 GLU B 419 CG CD OE1 OE2 REMARK 470 VAL B 422 CG1 CG2 REMARK 470 TYR B 459 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP B 473 CG OD1 OD2 REMARK 470 ARG B 477 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 481 CG CD CE NZ REMARK 470 LYS C 688 CG CD CE NZ REMARK 470 ARG C 692 CG CD NE CZ NH1 NH2 REMARK 470 GLN C 695 CG CD OE1 NE2 REMARK 470 GLN D 695 CG CD OE1 NE2 REMARK 470 ASP D 696 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU B 330 31.55 -88.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 847 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH A 848 DISTANCE = 9.33 ANGSTROMS REMARK 525 HOH A 849 DISTANCE = 10.19 ANGSTROMS REMARK 525 HOH B 922 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH B 923 DISTANCE = 6.10 ANGSTROMS REMARK 525 HOH B 924 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH B 925 DISTANCE = 7.74 ANGSTROMS REMARK 525 HOH B 926 DISTANCE = 7.87 ANGSTROMS REMARK 525 HOH D 703 DISTANCE = 6.10 ANGSTROMS DBREF 7RNM A 305 554 UNP P03372 ESR1_HUMAN 305 554 DBREF 7RNM B 305 554 UNP P03372 ESR1_HUMAN 305 554 DBREF 7RNM C 687 696 UNP E7EWM1 E7EWM1_HUMAN 687 696 DBREF 7RNM D 687 696 UNP E7EWM1 E7EWM1_HUMAN 687 696 SEQADV 7RNM SER A 537 UNP P03372 TYR 537 ENGINEERED MUTATION SEQADV 7RNM SER B 537 UNP P03372 TYR 537 ENGINEERED MUTATION SEQRES 1 A 250 SER LEU ALA LEU SER LEU THR ALA ASP GLN MET VAL SER SEQRES 2 A 250 ALA LEU LEU ASP ALA GLU PRO PRO ILE LEU TYR SER GLU SEQRES 3 A 250 TYR ASP PRO THR ARG PRO PHE SER GLU ALA SER MET MET SEQRES 4 A 250 GLY LEU LEU THR ASN LEU ALA ASP ARG GLU LEU VAL HIS SEQRES 5 A 250 MET ILE ASN TRP ALA LYS ARG VAL PRO GLY PHE VAL ASP SEQRES 6 A 250 LEU THR LEU HIS ASP GLN VAL HIS LEU LEU GLU CYS ALA SEQRES 7 A 250 TRP LEU GLU ILE LEU MET ILE GLY LEU VAL TRP ARG SER SEQRES 8 A 250 MET GLU HIS PRO GLY LYS LEU LEU PHE ALA PRO ASN LEU SEQRES 9 A 250 LEU LEU ASP ARG ASN GLN GLY LYS CYS VAL GLU GLY MET SEQRES 10 A 250 VAL GLU ILE PHE ASP MET LEU LEU ALA THR SER SER ARG SEQRES 11 A 250 PHE ARG MET MET ASN LEU GLN GLY GLU GLU PHE VAL CYS SEQRES 12 A 250 LEU LYS SER ILE ILE LEU LEU ASN SER GLY VAL TYR THR SEQRES 13 A 250 PHE LEU SER SER THR LEU LYS SER LEU GLU GLU LYS ASP SEQRES 14 A 250 HIS ILE HIS ARG VAL LEU ASP LYS ILE THR ASP THR LEU SEQRES 15 A 250 ILE HIS LEU MET ALA LYS ALA GLY LEU THR LEU GLN GLN SEQRES 16 A 250 GLN HIS GLN ARG LEU ALA GLN LEU LEU LEU ILE LEU SER SEQRES 17 A 250 HIS ILE ARG HIS MET SER ASN LYS GLY MET GLU HIS LEU SEQRES 18 A 250 TYR SER MET LYS CYS LYS ASN VAL VAL PRO LEU SER ASP SEQRES 19 A 250 LEU LEU LEU GLU MET LEU ASP ALA HIS ARG LEU HIS ALA SEQRES 20 A 250 PRO THR SER SEQRES 1 B 250 SER LEU ALA LEU SER LEU THR ALA ASP GLN MET VAL SER SEQRES 2 B 250 ALA LEU LEU ASP ALA GLU PRO PRO ILE LEU TYR SER GLU SEQRES 3 B 250 TYR ASP PRO THR ARG PRO PHE SER GLU ALA SER MET MET SEQRES 4 B 250 GLY LEU LEU THR ASN LEU ALA ASP ARG GLU LEU VAL HIS SEQRES 5 B 250 MET ILE ASN TRP ALA LYS ARG VAL PRO GLY PHE VAL ASP SEQRES 6 B 250 LEU THR LEU HIS ASP GLN VAL HIS LEU LEU GLU CYS ALA SEQRES 7 B 250 TRP LEU GLU ILE LEU MET ILE GLY LEU VAL TRP ARG SER SEQRES 8 B 250 MET GLU HIS PRO GLY LYS LEU LEU PHE ALA PRO ASN LEU SEQRES 9 B 250 LEU LEU ASP ARG ASN GLN GLY LYS CYS VAL GLU GLY MET SEQRES 10 B 250 VAL GLU ILE PHE ASP MET LEU LEU ALA THR SER SER ARG SEQRES 11 B 250 PHE ARG MET MET ASN LEU GLN GLY GLU GLU PHE VAL CYS SEQRES 12 B 250 LEU LYS SER ILE ILE LEU LEU ASN SER GLY VAL TYR THR SEQRES 13 B 250 PHE LEU SER SER THR LEU LYS SER LEU GLU GLU LYS ASP SEQRES 14 B 250 HIS ILE HIS ARG VAL LEU ASP LYS ILE THR ASP THR LEU SEQRES 15 B 250 ILE HIS LEU MET ALA LYS ALA GLY LEU THR LEU GLN GLN SEQRES 16 B 250 GLN HIS GLN ARG LEU ALA GLN LEU LEU LEU ILE LEU SER SEQRES 17 B 250 HIS ILE ARG HIS MET SER ASN LYS GLY MET GLU HIS LEU SEQRES 18 B 250 TYR SER MET LYS CYS LYS ASN VAL VAL PRO LEU SER ASP SEQRES 19 B 250 LEU LEU LEU GLU MET LEU ASP ALA HIS ARG LEU HIS ALA SEQRES 20 B 250 PRO THR SER SEQRES 1 C 10 HIS LYS ILE LEU HIS ARG LEU LEU GLN ASP SEQRES 1 D 10 HIS LYS ILE LEU HIS ARG LEU LEU GLN ASP HET 61Z A 601 26 HET 61Z B 601 26 HETNAM 61Z 2-(2-CHLORO-5-PHENYLTHIENO[2,3-D]PYRIMIDIN-4-YL)-2,3- HETNAM 2 61Z DIHYDRO-1H-ISOINDOL-5-OL FORMUL 5 61Z 2(C20 H14 CL N3 O S) FORMUL 7 HOH *378(H2 O) HELIX 1 AA1 THR A 311 ALA A 322 1 12 HELIX 2 AA2 SER A 341 LYS A 362 1 22 HELIX 3 AA3 THR A 371 SER A 395 1 25 HELIX 4 AA4 ASN A 413 GLY A 415 5 3 HELIX 5 AA5 VAL A 422 ASN A 439 1 18 HELIX 6 AA6 GLN A 441 SER A 456 1 16 HELIX 7 AA7 GLU A 470 ALA A 493 1 24 HELIX 8 AA8 THR A 496 LYS A 531 1 36 HELIX 9 AA9 SER A 537 HIS A 547 1 11 HELIX 10 AB1 THR B 311 ALA B 322 1 12 HELIX 11 AB2 SER B 338 LYS B 362 1 25 HELIX 12 AB3 THR B 371 MET B 396 1 26 HELIX 13 AB4 ARG B 412 LYS B 416 1 5 HELIX 14 AB5 GLY B 420 ASN B 439 1 20 HELIX 15 AB6 GLN B 441 SER B 456 1 16 HELIX 16 AB7 HIS B 474 ALA B 493 1 20 HELIX 17 AB8 THR B 496 LYS B 531 1 36 HELIX 18 AB9 SER B 537 HIS B 547 1 11 HELIX 19 AC1 ILE C 689 GLN C 695 1 7 HELIX 20 AC2 ILE D 689 GLN D 695 1 7 SHEET 1 AA1 2 LYS A 401 ALA A 405 0 SHEET 2 AA1 2 LEU A 408 ASP A 411 -1 O LEU A 408 N ALA A 405 SHEET 1 AA2 2 LYS B 401 ALA B 405 0 SHEET 2 AA2 2 LEU B 408 ASP B 411 -1 O LEU B 410 N LEU B 402 CRYST1 56.094 83.456 58.420 90.00 108.52 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017827 0.000000 0.005973 0.00000 SCALE2 0.000000 0.011982 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018053 0.00000