HEADER TRANSFERASE/INHIBITOR 05-AUG-21 7RQ0 TITLE HIV INTEGRASE CORE DOMAIN IN COMPLEX WITH 2-{2-[2-(3-{[4-(2-{[(3-{2- TITLE 2 [3-(CARBOXYMETHYL)-5-METHYL-1-BENZOFURAN-2-YL]ETHYNYL}PHENYL) TITLE 3 METHYL]AMINO}ETHYL)PIPERAZIN-1-YL]METHYL}PHENYL)ETHYNYL]-5-METHYL-1- TITLE 4 BENZOFURAN-3-YL}ACETIC ACID CAVEAT 7RQ0 STRUCTURE FACTOR FILE CONTAINS INCORRECT FREE R TEST SET. COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTEGRASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CORE DOMAIN (UNP RESIDUES 50-212); COMPND 5 EC: 2.7.7.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; SOURCE 3 ORGANISM_COMMON: HIV-1; SOURCE 4 ORGANISM_TAXID: 11676; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HIV, INTEGRASE, INHIBITOR COMPLEX, TRANSFERASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.A.GORMAN,M.W.PARKER REVDAT 2 18-OCT-23 7RQ0 1 REMARK REVDAT 1 10-AUG-22 7RQ0 0 JRNL AUTH M.A.GORMAN,M.W.PARKER JRNL TITL HIV INTEGRASE-LEDGF INTERACTION SCREENING BY FRAGMENT JRNL TITL 2 LINKING USING OFF-RATE SCREENING JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.18.2_3874: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.910 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 41174 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.234 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.790 REMARK 3 FREE R VALUE TEST SET COUNT : 4029 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.5400 - 6.0000 0.98 1298 117 0.2193 0.2420 REMARK 3 2 5.9900 - 4.7600 1.00 1283 157 0.1932 0.2238 REMARK 3 3 4.7600 - 4.1600 1.00 1296 124 0.1656 0.2131 REMARK 3 4 4.1600 - 3.7800 0.99 1354 131 0.1892 0.1806 REMARK 3 5 3.7800 - 3.5100 0.97 1262 126 0.1890 0.2360 REMARK 3 6 3.5100 - 3.3000 1.00 1248 164 0.2146 0.2734 REMARK 3 7 3.3000 - 3.1400 1.00 1239 191 0.2231 0.2712 REMARK 3 8 3.1400 - 3.0000 1.00 1293 174 0.1982 0.2333 REMARK 3 9 3.0000 - 2.8800 1.00 1320 96 0.2077 0.3027 REMARK 3 10 2.8800 - 2.7900 1.00 1315 154 0.2329 0.2622 REMARK 3 11 2.7800 - 2.7000 1.00 1264 166 0.2172 0.2907 REMARK 3 12 2.7000 - 2.6200 1.00 1280 150 0.2463 0.3516 REMARK 3 13 2.6200 - 2.5500 1.00 1341 132 0.2432 0.2664 REMARK 3 14 2.5500 - 2.4900 1.00 1317 135 0.2452 0.2615 REMARK 3 15 2.4900 - 2.4300 1.00 1242 142 0.2457 0.2868 REMARK 3 16 2.4300 - 2.3800 1.00 1375 138 0.2505 0.2519 REMARK 3 17 2.3800 - 2.3300 1.00 1257 146 0.2543 0.2931 REMARK 3 18 2.3300 - 2.2900 1.00 1331 132 0.2689 0.2770 REMARK 3 19 2.2900 - 2.2500 0.88 1123 111 0.4239 0.5059 REMARK 3 20 2.2500 - 2.2100 0.89 1161 118 0.4604 0.5310 REMARK 3 21 2.2100 - 2.1800 0.99 1331 160 0.3395 0.4296 REMARK 3 22 2.1700 - 2.1400 1.00 1284 134 0.2865 0.3149 REMARK 3 23 2.1400 - 2.1100 1.00 1274 112 0.2645 0.3106 REMARK 3 24 2.1100 - 2.0800 1.00 1338 152 0.2638 0.2951 REMARK 3 25 2.0800 - 2.0500 1.00 1335 132 0.2639 0.3574 REMARK 3 26 2.0500 - 2.0300 1.00 1241 156 0.2593 0.2758 REMARK 3 27 2.0300 - 2.0000 1.00 1334 127 0.2599 0.3431 REMARK 3 28 2.0000 - 1.9800 1.00 1315 168 0.2824 0.2700 REMARK 3 29 1.9800 - 1.9500 0.83 1083 84 0.3204 0.4263 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.310 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2251 REMARK 3 ANGLE : 2.033 3042 REMARK 3 CHIRALITY : 0.063 339 REMARK 3 PLANARITY : 0.009 369 REMARK 3 DIHEDRAL : 18.966 299 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 11.1595 11.8569 -18.7156 REMARK 3 T TENSOR REMARK 3 T11: 0.1868 T22: 0.1611 REMARK 3 T33: 0.1689 T12: 0.0754 REMARK 3 T13: -0.0083 T23: -0.0164 REMARK 3 L TENSOR REMARK 3 L11: 1.9248 L22: 1.5737 REMARK 3 L33: 3.8955 L12: 0.8427 REMARK 3 L13: 0.1057 L23: 0.0358 REMARK 3 S TENSOR REMARK 3 S11: 0.0666 S12: 0.0517 S13: 0.1166 REMARK 3 S21: 0.0346 S22: 0.0308 S23: 0.1099 REMARK 3 S31: -0.0775 S32: -0.0873 S33: -0.0715 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7RQ0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1000258779. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41174 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 46.420 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.06500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 3L3V REMARK 200 REMARK 200 REMARK: BI-PYRAMID REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.2 M AMMONIUM SULFATE, PH 7.0, 100 MM REMARK 280 POTASSIUM IODIDE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 69.14850 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 103.72275 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 34.57425 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -99.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 50 REMARK 465 HIS A 51 REMARK 465 GLY A 52 REMARK 465 GLU A 53 REMARK 465 VAL A 54 REMARK 465 ASP A 55 REMARK 465 SER A 56 REMARK 465 GLU A 92 REMARK 465 THR A 93 REMARK 465 TYR A 143 REMARK 465 ASN A 144 REMARK 465 PRO A 145 REMARK 465 GLN A 146 REMARK 465 SER A 147 REMARK 465 GLN A 148 REMARK 465 GLY A 149 REMARK 465 VAL A 150 REMARK 465 ILE A 151 REMARK 465 LYS A 188 REMARK 465 GLY A 189 REMARK 465 GLY A 190 REMARK 465 ILE A 191 REMARK 465 GLU A 209 REMARK 465 THR A 210 REMARK 465 LYS A 211 REMARK 465 GLU A 212 REMARK 465 MET B 50 REMARK 465 HIS B 51 REMARK 465 GLY B 52 REMARK 465 GLU B 53 REMARK 465 VAL B 54 REMARK 465 ASP B 55 REMARK 465 SER B 56 REMARK 465 PRO B 90 REMARK 465 ALA B 91 REMARK 465 GLU B 92 REMARK 465 TYR B 143 REMARK 465 ASN B 144 REMARK 465 PRO B 145 REMARK 465 GLN B 146 REMARK 465 SER B 147 REMARK 465 GLN B 148 REMARK 465 GLY B 149 REMARK 465 GLY B 189 REMARK 465 GLY B 190 REMARK 465 ILE B 191 REMARK 465 GLU B 209 REMARK 465 THR B 210 REMARK 465 LYS B 211 REMARK 465 GLU B 212 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O MET A 154 H LEU A 158 1.47 REMARK 500 HD22 ASN B 117 O HOH B 401 1.60 REMARK 500 ND2 ASN B 117 O HOH B 401 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 136 CE LYS A 136 NZ 0.166 REMARK 500 GLU B 157 CB GLU B 157 CG 0.189 REMARK 500 GLU B 157 CD GLU B 157 OE1 0.105 REMARK 500 GLU B 157 CD GLU B 157 OE2 0.079 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 136 CD - CE - NZ ANGL. DEV. = -19.6 DEGREES REMARK 500 GLU A 138 CA - CB - CG ANGL. DEV. = 13.5 DEGREES REMARK 500 LYS B 127 CB - CG - CD ANGL. DEV. = -26.0 DEGREES REMARK 500 LYS B 127 CD - CE - NZ ANGL. DEV. = -30.2 DEGREES REMARK 500 GLU B 157 OE1 - CD - OE2 ANGL. DEV. = -43.0 DEGREES REMARK 500 GLU B 157 CG - CD - OE1 ANGL. DEV. = 33.9 DEGREES REMARK 500 GLU B 157 CG - CD - OE2 ANGL. DEV. = -43.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR B 194 156.93 -46.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6WE7 RELATED DB: PDB REMARK 900 HIV INTEGRASE CORE DOMAIN IN COMPLEX WITH INHIBITOR 3-METHYL-2-{5- REMARK 900 METHYL-2-[2-(THIOPHEN-2-YL)ETHYNYL]-1- BENZOFURAN-3-YL}BUTANOIC ACID DBREF 7RQ0 A 50 212 UNP Q76353 Q76353_9HIV1 50 212 DBREF 7RQ0 B 50 212 UNP Q76353 Q76353_9HIV1 50 212 SEQADV 7RQ0 GLU A 53 UNP Q76353 GLN 53 CONFLICT SEQADV 7RQ0 SER A 56 UNP Q76353 CYS 56 CONFLICT SEQADV 7RQ0 GLU A 131 UNP Q76353 TRP 131 CONFLICT SEQADV 7RQ0 LYS A 185 UNP Q76353 PHE 185 CONFLICT SEQADV 7RQ0 GLU A 209 UNP Q76353 GLN 209 CONFLICT SEQADV 7RQ0 GLU B 53 UNP Q76353 GLN 53 CONFLICT SEQADV 7RQ0 SER B 56 UNP Q76353 CYS 56 CONFLICT SEQADV 7RQ0 GLU B 131 UNP Q76353 TRP 131 CONFLICT SEQADV 7RQ0 LYS B 185 UNP Q76353 PHE 185 CONFLICT SEQADV 7RQ0 GLU B 209 UNP Q76353 GLN 209 CONFLICT SEQRES 1 A 163 MET HIS GLY GLU VAL ASP SER SER PRO GLY ILE TRP GLN SEQRES 2 A 163 LEU ASP CYS THR HIS LEU GLU GLY LYS VAL ILE LEU VAL SEQRES 3 A 163 ALA VAL HIS VAL ALA SER GLY TYR ILE GLU ALA GLU VAL SEQRES 4 A 163 ILE PRO ALA GLU THR GLY GLN GLU THR ALA TYR PHE LEU SEQRES 5 A 163 LEU LYS LEU ALA GLY ARG TRP PRO VAL LYS THR VAL HIS SEQRES 6 A 163 THR ASP ASN GLY SER ASN PHE THR SER THR THR VAL LYS SEQRES 7 A 163 ALA ALA CYS GLU TRP ALA GLY ILE LYS GLN GLU PHE GLY SEQRES 8 A 163 ILE PRO TYR ASN PRO GLN SER GLN GLY VAL ILE GLU SER SEQRES 9 A 163 MET ASN LYS GLU LEU LYS LYS ILE ILE GLY GLN VAL ARG SEQRES 10 A 163 ASP GLN ALA GLU HIS LEU LYS THR ALA VAL GLN MET ALA SEQRES 11 A 163 VAL PHE ILE HIS ASN LYS LYS ARG LYS GLY GLY ILE GLY SEQRES 12 A 163 GLY TYR SER ALA GLY GLU ARG ILE VAL ASP ILE ILE ALA SEQRES 13 A 163 THR ASP ILE GLU THR LYS GLU SEQRES 1 B 163 MET HIS GLY GLU VAL ASP SER SER PRO GLY ILE TRP GLN SEQRES 2 B 163 LEU ASP CYS THR HIS LEU GLU GLY LYS VAL ILE LEU VAL SEQRES 3 B 163 ALA VAL HIS VAL ALA SER GLY TYR ILE GLU ALA GLU VAL SEQRES 4 B 163 ILE PRO ALA GLU THR GLY GLN GLU THR ALA TYR PHE LEU SEQRES 5 B 163 LEU LYS LEU ALA GLY ARG TRP PRO VAL LYS THR VAL HIS SEQRES 6 B 163 THR ASP ASN GLY SER ASN PHE THR SER THR THR VAL LYS SEQRES 7 B 163 ALA ALA CYS GLU TRP ALA GLY ILE LYS GLN GLU PHE GLY SEQRES 8 B 163 ILE PRO TYR ASN PRO GLN SER GLN GLY VAL ILE GLU SER SEQRES 9 B 163 MET ASN LYS GLU LEU LYS LYS ILE ILE GLY GLN VAL ARG SEQRES 10 B 163 ASP GLN ALA GLU HIS LEU LYS THR ALA VAL GLN MET ALA SEQRES 11 B 163 VAL PHE ILE HIS ASN LYS LYS ARG LYS GLY GLY ILE GLY SEQRES 12 B 163 GLY TYR SER ALA GLY GLU ARG ILE VAL ASP ILE ILE ALA SEQRES 13 B 163 THR ASP ILE GLU THR LYS GLU HET SO4 A 301 5 HET SO4 A 302 5 HET IOD A 303 1 HET IOD A 304 1 HET IOD A 305 1 HET SO4 B 301 5 HET SO4 B 302 5 HET SO4 B 303 5 HET SO4 B 304 5 HET 6I2 B 305 55 HET IOD B 306 1 HET IOD B 307 1 HETNAM SO4 SULFATE ION HETNAM IOD IODIDE ION HETNAM 6I2 {2-[(3-{[4-(2-{[(3-{[3-(CARBOXYMETHYL)-5-METHYL-1- HETNAM 2 6I2 BENZOFURAN-2-YL]ETHYNYL}PHENYL)METHYL]AMINO}ETHYL) HETNAM 3 6I2 PIPERAZIN-1-YL]METHYL}PHENYL)ETHYNYL]-5-METHYL-1- HETNAM 4 6I2 BENZOFURAN-3-YL}ACETIC ACID FORMUL 3 SO4 6(O4 S 2-) FORMUL 5 IOD 5(I 1-) FORMUL 12 6I2 C46 H43 N3 O6 FORMUL 15 HOH *59(H2 O) HELIX 1 AA1 GLN A 95 TRP A 108 1 14 HELIX 2 AA2 GLY A 118 THR A 122 5 5 HELIX 3 AA3 SER A 123 GLY A 134 1 12 HELIX 4 AA4 SER A 153 ARG A 166 1 14 HELIX 5 AA5 ASP A 167 ALA A 169 5 3 HELIX 6 AA6 HIS A 171 LYS A 186 1 16 HELIX 7 AA7 SER A 195 ILE A 208 1 14 HELIX 8 AA8 GLY B 94 TRP B 108 1 15 HELIX 9 AA9 GLY B 118 THR B 122 5 5 HELIX 10 AB1 SER B 123 GLY B 134 1 12 HELIX 11 AB2 ILE B 151 ARG B 166 1 16 HELIX 12 AB3 ASP B 167 ALA B 169 5 3 HELIX 13 AB4 HIS B 171 LYS B 186 1 16 HELIX 14 AB5 SER B 195 ILE B 208 1 14 SHEET 1 AA1 5 ILE A 84 ILE A 89 0 SHEET 2 AA1 5 LYS A 71 HIS A 78 -1 N LEU A 74 O GLU A 87 SHEET 3 AA1 5 ILE A 60 LEU A 68 -1 N GLN A 62 O VAL A 77 SHEET 4 AA1 5 THR A 112 THR A 115 1 O THR A 112 N TRP A 61 SHEET 5 AA1 5 LYS A 136 PHE A 139 1 O GLU A 138 N VAL A 113 SHEET 1 AA2 5 ILE B 84 ILE B 89 0 SHEET 2 AA2 5 LYS B 71 HIS B 78 -1 N ALA B 76 O GLU B 85 SHEET 3 AA2 5 ILE B 60 LEU B 68 -1 N THR B 66 O ILE B 73 SHEET 4 AA2 5 THR B 112 THR B 115 1 O HIS B 114 N LEU B 63 SHEET 5 AA2 5 LYS B 136 PHE B 139 1 O LYS B 136 N VAL B 113 CRYST1 46.417 46.417 138.297 90.00 90.00 90.00 P 43 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021544 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021544 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007231 0.00000