HEADER TRANSFERASE 13-AUG-21 7RTK TITLE STRUCTURE OF THE (NIAU)2 COMPLEX WITH N-TERMINAL MUTATION OF ISCU2 TITLE 2 Y35D AT 2.5 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYSTEINE DESULFURASE, MITOCHONDRIAL; COMPND 3 CHAIN: A; COMPND 4 EC: 2.8.1.7; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: LYR MOTIF-CONTAINING PROTEIN 4; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: ACYL CARRIER PROTEIN; COMPND 12 CHAIN: C; COMPND 13 SYNONYM: ACP; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: IRON-SULFUR CLUSTER ASSEMBLY ENZYME ISCU, MITOCHONDRIAL; COMPND 17 CHAIN: D; COMPND 18 SYNONYM: NIFU-LIKE N-TERMINAL DOMAIN-CONTAINING PROTEIN,NIFU-LIKE COMPND 19 PROTEIN; COMPND 20 ENGINEERED: YES; COMPND 21 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NFS1, NIFS, HUSSY-08; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: LYRM4, C6ORF149, ISD11, CGI-203; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 17 ORGANISM_TAXID: 562; SOURCE 18 GENE: ACPP, ECS88_1108; SOURCE 19 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 20 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 21 MOL_ID: 4; SOURCE 22 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 23 ORGANISM_COMMON: HUMAN; SOURCE 24 ORGANISM_TAXID: 9606; SOURCE 25 GENE: ISCU, NIFUN; SOURCE 26 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 27 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COMPLEX, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.T.BONIECKI,M.CYGLER REVDAT 2 18-OCT-23 7RTK 1 REMARK REVDAT 1 25-AUG-21 7RTK 0 JRNL AUTH S.A.FREIBERT,M.T.BONIECKI,V.SHULZ,C.WILBRECHT,N.KRAPOTH, JRNL AUTH 2 U.MUHLENHOFF,O.STEHLING,M.CYGLER,R.LILL JRNL TITL THE ESSENTIAL FUNCTION OF ISCU2 AND ITS CONSERVED N-TERMINUS JRNL TITL 2 IN FE/S CLUSTER BIOGENESIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1_4122 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 33251 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1663 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.0000 - 5.7200 1.00 2870 152 0.1766 0.2229 REMARK 3 2 5.7200 - 4.5400 1.00 2700 142 0.1513 0.1863 REMARK 3 3 4.5400 - 3.9700 1.00 2659 140 0.1372 0.1482 REMARK 3 4 3.9700 - 3.6100 1.00 2627 138 0.1445 0.1874 REMARK 3 5 3.6000 - 3.3500 1.00 2633 138 0.1587 0.2216 REMARK 3 6 3.3500 - 3.1500 1.00 2600 137 0.1902 0.2668 REMARK 3 7 3.1500 - 2.9900 1.00 2589 137 0.1914 0.2331 REMARK 3 8 2.9900 - 2.8600 1.00 2595 136 0.1761 0.2272 REMARK 3 9 2.8600 - 2.7500 1.00 2587 136 0.1750 0.2454 REMARK 3 10 2.7500 - 2.6600 1.00 2575 136 0.1947 0.2756 REMARK 3 11 2.6600 - 2.5700 1.00 2581 136 0.2243 0.2780 REMARK 3 12 2.5700 - 2.5000 1.00 2572 135 0.2632 0.3200 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.06 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5629 REMARK 3 ANGLE : 0.576 7508 REMARK 3 CHIRALITY : 0.044 841 REMARK 3 PLANARITY : 0.005 944 REMARK 3 DIHEDRAL : 11.885 906 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND ( RESID 55:455 OR RESID 501:501 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.683 62.649 74.148 REMARK 3 T TENSOR REMARK 3 T11: 0.2064 T22: 0.2731 REMARK 3 T33: 0.2878 T12: -0.0057 REMARK 3 T13: 0.0120 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 0.7690 L22: 0.4350 REMARK 3 L33: 1.3581 L12: 0.0059 REMARK 3 L13: 0.2357 L23: -0.0521 REMARK 3 S TENSOR REMARK 3 S11: 0.0469 S12: -0.0179 S13: -0.0456 REMARK 3 S21: -0.0213 S22: 0.0220 S23: -0.0377 REMARK 3 S31: 0.0054 S32: 0.2592 S33: -0.0693 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN B AND RESID 2:85 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.526 85.552 67.134 REMARK 3 T TENSOR REMARK 3 T11: 0.3432 T22: 0.2256 REMARK 3 T33: 0.3282 T12: 0.0359 REMARK 3 T13: -0.0397 T23: -0.0156 REMARK 3 L TENSOR REMARK 3 L11: 3.1341 L22: 4.7036 REMARK 3 L33: 3.1912 L12: 2.3096 REMARK 3 L13: -1.0452 L23: -1.1540 REMARK 3 S TENSOR REMARK 3 S11: -0.0735 S12: 0.1118 S13: 0.0631 REMARK 3 S21: -0.1036 S22: 0.0730 S23: 0.0254 REMARK 3 S31: -0.3706 S32: 0.1089 S33: -0.0167 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN C AND ( RESID 2:76 OR RESID 301:301 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.540 102.365 77.683 REMARK 3 T TENSOR REMARK 3 T11: 1.0951 T22: 0.5239 REMARK 3 T33: 0.5535 T12: 0.0420 REMARK 3 T13: 0.1283 T23: -0.0348 REMARK 3 L TENSOR REMARK 3 L11: 5.8811 L22: 2.0245 REMARK 3 L33: 4.1106 L12: -1.0717 REMARK 3 L13: -0.1987 L23: 1.3702 REMARK 3 S TENSOR REMARK 3 S11: 0.0500 S12: -0.9160 S13: 0.8617 REMARK 3 S21: 0.9574 S22: 0.1933 S23: 0.1553 REMARK 3 S31: -0.7450 S32: -0.6382 S33: -0.1665 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN D AND RESID 36:159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.442 47.322 109.241 REMARK 3 T TENSOR REMARK 3 T11: 0.3843 T22: 0.4662 REMARK 3 T33: 0.4772 T12: 0.0257 REMARK 3 T13: 0.0686 T23: 0.0971 REMARK 3 L TENSOR REMARK 3 L11: 2.6112 L22: 3.6668 REMARK 3 L33: 5.6246 L12: 0.5267 REMARK 3 L13: -0.3927 L23: -0.7765 REMARK 3 S TENSOR REMARK 3 S11: -0.1168 S12: -0.3136 S13: -0.6699 REMARK 3 S21: 0.1099 S22: 0.0014 S23: 0.1748 REMARK 3 S31: 0.8066 S32: -0.0728 S33: 0.0232 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7RTK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1000258959. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROCESS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33254 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 49.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.92 REMARK 200 R MERGE (I) : 0.15000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.79 REMARK 200 R MERGE FOR SHELL (I) : 1.01100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AUTOPROCESS REMARK 200 STARTING MODEL: 6UXE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 5.5 22.5 % PEG 400, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 288K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 123.18500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.17500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.17500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 61.59250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.17500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.17500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 184.77750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.17500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.17500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 61.59250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.17500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.17500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 184.77750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 123.18500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 86.35000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 86.35000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 123.18500 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 640 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 52 REMARK 465 GLY A 53 REMARK 465 SER A 54 REMARK 465 THR A 382 REMARK 465 SER A 383 REMARK 465 ALA A 384 REMARK 465 SER A 385 REMARK 465 LEU A 386 REMARK 465 GLU A 387 REMARK 465 GLN A 456 REMARK 465 HIS A 457 REMARK 465 MET B 1 REMARK 465 ARG B 86 REMARK 465 ASP B 87 REMARK 465 MET B 88 REMARK 465 PRO B 89 REMARK 465 ARG B 90 REMARK 465 THR B 91 REMARK 465 SER C 1 REMARK 465 ALA C 77 REMARK 465 MET D 33 REMARK 465 ALA D 34 REMARK 465 ASP D 35 REMARK 465 LYS D 160 REMARK 465 LYS D 161 REMARK 465 GLY D 162 REMARK 465 GLU D 163 REMARK 465 ALA D 164 REMARK 465 GLU D 165 REMARK 465 LYS D 166 REMARK 465 LYS D 167 REMARK 465 LEU D 168 REMARK 465 GLU D 169 REMARK 465 HIS D 170 REMARK 465 HIS D 171 REMARK 465 HIS D 172 REMARK 465 HIS D 173 REMARK 465 HIS D 174 REMARK 465 HIS D 175 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 91 NE CZ NH1 NH2 REMARK 470 ARG A 143 NE CZ NH1 NH2 REMARK 470 ARG A 145 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 157 CE NZ REMARK 470 LYS A 226 CE NZ REMARK 470 LYS A 320 CD CE NZ REMARK 470 LYS A 324 CD CE NZ REMARK 470 GLU A 364 CD OE1 OE2 REMARK 470 LYS A 371 NZ REMARK 470 ARG A 393 NE CZ NH1 NH2 REMARK 470 LYS A 450 CG CD CE NZ REMARK 470 LYS A 453 CG CD CE NZ REMARK 470 LYS B 21 CE NZ REMARK 470 ARG B 37 CZ NH1 NH2 REMARK 470 LYS B 47 CD CE NZ REMARK 470 LYS B 58 CE NZ REMARK 470 ASN B 85 OD1 ND2 REMARK 470 THR C 2 OG1 CG2 REMARK 470 ILE C 3 CG1 CD1 REMARK 470 GLU C 4 CD OE1 OE2 REMARK 470 GLU C 5 CG CD OE1 OE2 REMARK 470 LYS C 8 CD CE NZ REMARK 470 LYS C 9 CG CD CE NZ REMARK 470 LYS C 18 CG CD CE NZ REMARK 470 GLN C 19 CG CD OE1 NE2 REMARK 470 GLU C 20 CG CD OE1 OE2 REMARK 470 GLU C 21 CD OE1 OE2 REMARK 470 ASN C 25 CG OD1 ND2 REMARK 470 GLU C 48 CD OE1 OE2 REMARK 470 GLU C 53 CG CD OE1 OE2 REMARK 470 GLU C 60 CG CD OE1 OE2 REMARK 470 GLN C 66 CG CD OE1 NE2 REMARK 470 ILE C 69 CG1 CG2 CD1 REMARK 470 GLN C 76 CD OE1 NE2 REMARK 470 LYS D 37 CG CD CE NZ REMARK 470 LYS D 54 CD CE NZ REMARK 470 LYS D 57 CG CD CE NZ REMARK 470 LYS D 82 CG CD CE NZ REMARK 470 GLU D 115 CG CD OE1 OE2 REMARK 470 LYS D 154 CD CE NZ REMARK 470 GLU D 158 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 208 OG SER A 389 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 62 39.53 -141.95 REMARK 500 ALA A 380 69.37 -103.04 REMARK 500 TRP A 454 -148.36 -85.24 REMARK 500 REMARK 500 REMARK: NULL DBREF 7RTK A 56 457 UNP Q9Y697 NFS1_HUMAN 56 457 DBREF 7RTK B 1 91 UNP Q9HD34 LYRM4_HUMAN 1 91 DBREF 7RTK C 1 77 UNP B7MJ81 ACP_ECO45 2 78 DBREF 7RTK D 35 167 UNP Q9H1K1 ISCU_HUMAN 35 167 SEQADV 7RTK MET A 52 UNP Q9Y697 INITIATING METHIONINE SEQADV 7RTK GLY A 53 UNP Q9Y697 EXPRESSION TAG SEQADV 7RTK SER A 54 UNP Q9Y697 EXPRESSION TAG SEQADV 7RTK SER A 55 UNP Q9Y697 EXPRESSION TAG SEQADV 7RTK ALA B 11 UNP Q9HD34 SER 11 VARIANT SEQADV 7RTK MET D 33 UNP Q9H1K1 INITIATING METHIONINE SEQADV 7RTK ALA D 34 UNP Q9H1K1 EXPRESSION TAG SEQADV 7RTK ASP D 35 UNP Q9H1K1 TYR 35 CONFLICT SEQADV 7RTK LEU D 168 UNP Q9H1K1 EXPRESSION TAG SEQADV 7RTK GLU D 169 UNP Q9H1K1 EXPRESSION TAG SEQADV 7RTK HIS D 170 UNP Q9H1K1 EXPRESSION TAG SEQADV 7RTK HIS D 171 UNP Q9H1K1 EXPRESSION TAG SEQADV 7RTK HIS D 172 UNP Q9H1K1 EXPRESSION TAG SEQADV 7RTK HIS D 173 UNP Q9H1K1 EXPRESSION TAG SEQADV 7RTK HIS D 174 UNP Q9H1K1 EXPRESSION TAG SEQADV 7RTK HIS D 175 UNP Q9H1K1 EXPRESSION TAG SEQRES 1 A 406 MET GLY SER SER LEU ARG PRO LEU TYR MET ASP VAL GLN SEQRES 2 A 406 ALA THR THR PRO LEU ASP PRO ARG VAL LEU ASP ALA MET SEQRES 3 A 406 LEU PRO TYR LEU ILE ASN TYR TYR GLY ASN PRO HIS SER SEQRES 4 A 406 ARG THR HIS ALA TYR GLY TRP GLU SER GLU ALA ALA MET SEQRES 5 A 406 GLU ARG ALA ARG GLN GLN VAL ALA SER LEU ILE GLY ALA SEQRES 6 A 406 ASP PRO ARG GLU ILE ILE PHE THR SER GLY ALA THR GLU SEQRES 7 A 406 SER ASN ASN ILE ALA ILE LYS GLY VAL ALA ARG PHE TYR SEQRES 8 A 406 ARG SER ARG LYS LYS HIS LEU ILE THR THR GLN THR GLU SEQRES 9 A 406 HIS LYS CYS VAL LEU ASP SER CYS ARG SER LEU GLU ALA SEQRES 10 A 406 GLU GLY PHE GLN VAL THR TYR LEU PRO VAL GLN LYS SER SEQRES 11 A 406 GLY ILE ILE ASP LEU LYS GLU LEU GLU ALA ALA ILE GLN SEQRES 12 A 406 PRO ASP THR SER LEU VAL SER VAL MET THR VAL ASN ASN SEQRES 13 A 406 GLU ILE GLY VAL LYS GLN PRO ILE ALA GLU ILE GLY ARG SEQRES 14 A 406 ILE CYS SER SER ARG LYS VAL TYR PHE HIS THR ASP ALA SEQRES 15 A 406 ALA GLN ALA VAL GLY LYS ILE PRO LEU ASP VAL ASN ASP SEQRES 16 A 406 MET LYS ILE ASP LEU MET SER ILE SER GLY HIS LYS ILE SEQRES 17 A 406 TYR GLY PRO LYS GLY VAL GLY ALA ILE TYR ILE ARG ARG SEQRES 18 A 406 ARG PRO ARG VAL ARG VAL GLU ALA LEU GLN SER GLY GLY SEQRES 19 A 406 GLY GLN GLU ARG GLY MET ARG SER GLY THR VAL PRO THR SEQRES 20 A 406 PRO LEU VAL VAL GLY LEU GLY ALA ALA CYS GLU VAL ALA SEQRES 21 A 406 GLN GLN GLU MET GLU TYR ASP HIS LYS ARG ILE SER LYS SEQRES 22 A 406 LEU SER GLU ARG LEU ILE GLN ASN ILE MET LYS SER LEU SEQRES 23 A 406 PRO ASP VAL VAL MET ASN GLY ASP PRO LYS HIS HIS TYR SEQRES 24 A 406 PRO GLY CYS ILE ASN LEU SER PHE ALA TYR VAL GLU GLY SEQRES 25 A 406 GLU SER LEU LEU MET ALA LEU LYS ASP VAL ALA LEU SER SEQRES 26 A 406 SER GLY SER ALA CYS THR SER ALA SER LEU GLU PRO SER SEQRES 27 A 406 TYR VAL LEU ARG ALA ILE GLY THR ASP GLU ASP LEU ALA SEQRES 28 A 406 HIS SER SER ILE ARG PHE GLY ILE GLY ARG PHE THR THR SEQRES 29 A 406 GLU GLU GLU VAL ASP TYR THR VAL GLU LYS CYS ILE GLN SEQRES 30 A 406 HIS VAL LYS ARG LEU ARG GLU MET SER PRO LEU TRP GLU SEQRES 31 A 406 MET VAL GLN ASP GLY ILE ASP LEU LYS SER ILE LYS TRP SEQRES 32 A 406 THR GLN HIS SEQRES 1 B 91 MET ALA ALA SER SER ARG ALA GLN VAL LEU ALA LEU TYR SEQRES 2 B 91 ARG ALA MET LEU ARG GLU SER LYS ARG PHE SER ALA TYR SEQRES 3 B 91 ASN TYR ARG THR TYR ALA VAL ARG ARG ILE ARG ASP ALA SEQRES 4 B 91 PHE ARG GLU ASN LYS ASN VAL LYS ASP PRO VAL GLU ILE SEQRES 5 B 91 GLN THR LEU VAL ASN LYS ALA LYS ARG ASP LEU GLY VAL SEQRES 6 B 91 ILE ARG ARG GLN VAL HIS ILE GLY GLN LEU TYR SER THR SEQRES 7 B 91 ASP LYS LEU ILE ILE GLU ASN ARG ASP MET PRO ARG THR SEQRES 1 C 77 SER THR ILE GLU GLU ARG VAL LYS LYS ILE ILE GLY GLU SEQRES 2 C 77 GLN LEU GLY VAL LYS GLN GLU GLU VAL THR ASN ASN ALA SEQRES 3 C 77 SER PHE VAL GLU ASP LEU GLY ALA ASP SER LEU ASP THR SEQRES 4 C 77 VAL GLU LEU VAL MET ALA LEU GLU GLU GLU PHE ASP THR SEQRES 5 C 77 GLU ILE PRO ASP GLU GLU ALA GLU LYS ILE THR THR VAL SEQRES 6 C 77 GLN ALA ALA ILE ASP TYR ILE ASN GLY HIS GLN ALA SEQRES 1 D 143 MET ALA ASP HIS LYS LYS VAL VAL ASP HIS TYR GLU ASN SEQRES 2 D 143 PRO ARG ASN VAL GLY SER LEU ASP LYS THR SER LYS ASN SEQRES 3 D 143 VAL GLY THR GLY LEU VAL GLY ALA PRO ALA CYS GLY ASP SEQRES 4 D 143 VAL MET LYS LEU GLN ILE GLN VAL ASP GLU LYS GLY LYS SEQRES 5 D 143 ILE VAL ASP ALA ARG PHE LYS THR PHE GLY CYS GLY SER SEQRES 6 D 143 ALA ILE ALA SER SER SER LEU ALA THR GLU TRP VAL LYS SEQRES 7 D 143 GLY LYS THR VAL GLU GLU ALA LEU THR ILE LYS ASN THR SEQRES 8 D 143 ASP ILE ALA LYS GLU LEU CYS LEU PRO PRO VAL LYS LEU SEQRES 9 D 143 HIS CYS SER MET LEU ALA GLU ASP ALA ILE LYS ALA ALA SEQRES 10 D 143 LEU ALA ASP TYR LYS LEU LYS GLN GLU PRO LYS LYS GLY SEQRES 11 D 143 GLU ALA GLU LYS LYS LEU GLU HIS HIS HIS HIS HIS HIS HET PLP A 501 15 HET EDO A 502 4 HET GOL A 503 6 HET GOL A 504 6 HET EDO A 505 4 HET EDO A 506 4 HET EDO A 507 4 HET EDO A 508 4 HET EDO A 509 4 HET EDO A 510 4 HET EDO A 511 4 HET EDO A 512 4 HET EDO A 513 4 HET EDO A 514 4 HET EDO A 515 4 HET PG4 A 516 13 HET PEG A 517 7 HET EDO A 518 4 HET EDO A 519 4 HET P15 A 520 20 HET PEG A 521 7 HET PEG A 522 7 HET DTT A 523 8 HET PGE A 524 10 HET EDO A 525 4 HET EDO A 526 4 HET EDO A 527 4 HET PGE A 528 10 HET PGE A 529 10 HET EDO A 530 4 HET EDO A 531 4 HET EDO A 532 4 HET PEG A 533 7 HET PEG A 534 7 HET EDO A 535 4 HET EDO B 101 4 HET PEG B 102 7 HET PEG B 103 7 HET EDO B 104 4 HET PEG B 105 7 HET EDO B 106 4 HET EDO B 107 4 HET EDT B 108 20 HET 8Q1 C 301 34 HET MES C 302 12 HET EDO C 303 4 HET EDO D 201 4 HET 1PE D 202 16 HET EDO D 203 4 HET GOL D 204 6 HET EDO D 205 4 HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM P15 2,5,8,11,14,17-HEXAOXANONADECAN-19-OL HETNAM DTT 2,3-DIHYDROXY-1,4-DITHIOBUTANE HETNAM PGE TRIETHYLENE GLYCOL HETNAM EDT {[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL- HETNAM 2 EDT AMINO}-ACETIC ACID HETNAM 8Q1 S-[2-({N-[(2R)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY) HETNAM 2 8Q1 BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] DODECANETHIOATE HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN PLP VITAMIN B6 PHOSPHATE HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN DTT 1,4-DITHIOTHREITOL HETSYN 8Q1 S-DODECANOYL-4'-PHOSPHOPANTETHEINE HETSYN 1PE PEG400 FORMUL 5 PLP C8 H10 N O6 P FORMUL 6 EDO 29(C2 H6 O2) FORMUL 7 GOL 3(C3 H8 O3) FORMUL 20 PG4 C8 H18 O5 FORMUL 21 PEG 8(C4 H10 O3) FORMUL 24 P15 C13 H28 O7 FORMUL 27 DTT C4 H10 O2 S2 FORMUL 28 PGE 3(C6 H14 O4) FORMUL 47 EDT C10 H16 N2 O8 FORMUL 48 8Q1 C23 H45 N2 O8 P S FORMUL 49 MES C6 H13 N O4 S FORMUL 52 1PE C10 H22 O6 FORMUL 56 HOH *209(H2 O) HELIX 1 AA1 ASP A 70 ASN A 83 1 14 HELIX 2 AA2 HIS A 93 GLY A 115 1 23 HELIX 3 AA3 ASP A 117 ARG A 119 5 3 HELIX 4 AA4 GLY A 126 TYR A 142 1 17 HELIX 5 AA5 HIS A 156 GLU A 169 1 14 HELIX 6 AA6 ASP A 185 ILE A 193 1 9 HELIX 7 AA7 PRO A 214 SER A 224 1 11 HELIX 8 AA8 ASP A 243 LYS A 248 1 6 HELIX 9 AA9 HIS A 257 ILE A 259 5 3 HELIX 10 AB1 PRO A 297 LYS A 335 1 39 HELIX 11 AB2 ASP A 345 HIS A 349 5 5 HELIX 12 AB3 GLU A 362 LEU A 370 1 9 HELIX 13 AB4 SER A 389 ILE A 395 1 7 HELIX 14 AB5 ASP A 398 HIS A 403 1 6 HELIX 15 AB6 THR A 415 MET A 436 1 22 HELIX 16 AB7 SER A 437 ASP A 445 1 9 HELIX 17 AB8 ASP A 448 ILE A 452 5 5 HELIX 18 AB9 SER B 4 LYS B 21 1 18 HELIX 19 AC1 ALA B 25 ASN B 43 1 19 HELIX 20 AC2 ASP B 48 TYR B 76 1 29 HELIX 21 AC3 LEU B 81 ASN B 85 5 5 HELIX 22 AC4 GLU C 5 GLY C 16 1 12 HELIX 23 AC5 SER C 27 GLY C 33 1 7 HELIX 24 AC6 ASP C 35 ASP C 51 1 17 HELIX 25 AC7 PRO C 55 GLU C 60 1 6 HELIX 26 AC8 THR C 64 GLY C 74 1 11 HELIX 27 AC9 LYS D 37 ASN D 45 1 9 HELIX 28 AD1 PRO D 67 GLY D 70 5 4 HELIX 29 AD2 CYS D 95 LYS D 110 1 16 HELIX 30 AD3 THR D 113 THR D 119 1 7 HELIX 31 AD4 LYS D 121 CYS D 130 1 10 HELIX 32 AD5 PRO D 132 VAL D 134 5 3 HELIX 33 AD6 LYS D 135 GLN D 157 1 23 SHEET 1 AA1 2 LEU A 59 TYR A 60 0 SHEET 2 AA1 2 VAL A 373 ALA A 374 1 O ALA A 374 N LEU A 59 SHEET 1 AA2 7 ILE A 121 THR A 124 0 SHEET 2 AA2 7 GLY A 266 ILE A 270 -1 O GLY A 266 N THR A 124 SHEET 3 AA2 7 LEU A 251 SER A 255 -1 N ILE A 254 O ALA A 267 SHEET 4 AA2 7 TYR A 228 ASP A 232 1 N THR A 231 O LEU A 251 SHEET 5 AA2 7 THR A 197 SER A 201 1 N VAL A 200 O HIS A 230 SHEET 6 AA2 7 HIS A 148 THR A 152 1 N HIS A 148 O SER A 198 SHEET 7 AA2 7 GLN A 172 LEU A 176 1 O LEU A 176 N THR A 151 SHEET 1 AA3 3 VAL A 340 MET A 342 0 SHEET 2 AA3 3 CYS A 353 PHE A 358 -1 O SER A 357 N VAL A 341 SHEET 3 AA3 3 SER A 405 GLY A 409 -1 O PHE A 408 N ILE A 354 SHEET 1 AA4 3 VAL D 59 ALA D 66 0 SHEET 2 AA4 3 ASP D 71 VAL D 79 -1 O MET D 73 N VAL D 64 SHEET 3 AA4 3 ILE D 85 PHE D 93 -1 O ARG D 89 N GLN D 76 LINK NZ LYS A 258 C4A PLP A 501 1555 1555 1.43 LINK OG SER C 36 P24 8Q1 C 301 1555 1555 1.56 CISPEP 1 ARG A 273 PRO A 274 0 -1.83 CRYST1 86.350 86.350 246.370 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011581 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011581 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004059 0.00000