HEADER TRANSFERASE/TRANSFERASE INHIBITOR 16-AUG-21 7RUD TITLE DAHP SYNTHASE COMPLEX WITH TRIFLUOROPYRUVATE OXIME COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE, PHE-SENSITIVE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: 3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE,DAHP COMPND 5 SYNTHASE,PHOSPHO-2-KETO-3-DEOXYHEPTONATE ALDOLASE; COMPND 6 EC: 2.5.1.54; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI (STRAIN K12); SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: AROG, B0754, JW0737; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS DAHP SYNTHASE, INHIBITOR, COMPLEX, LYASE, TRANSFERASE-TRANSFERASE KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.HEIMHALT,P.MUKHERJEE,R.GRAINGER,R.SZABLA,C.BROWN,R.TURNER, AUTHOR 2 M.S.JUNOP,P.J.BERTI REVDAT 4 18-OCT-23 7RUD 1 REMARK REVDAT 3 22-DEC-21 7RUD 1 JRNL REVDAT 2 01-DEC-21 7RUD 1 JRNL REVDAT 1 17-NOV-21 7RUD 0 JRNL AUTH M.HEIMHALT,P.MUKHERJEE,R.A.GRAINGER,R.SZABLA,C.BROWN, JRNL AUTH 2 R.TURNER,M.S.JUNOP,P.J.BERTI JRNL TITL AN INHIBITOR-IN-PIECES APPROACH TO DAHP SYNTHASE INHIBITION: JRNL TITL 2 POTENT ENZYME AND BACTERIAL GROWTH INHIBITION. JRNL REF ACS INFECT DIS. V. 7 3292 2021 JRNL REFN ESSN 2373-8227 JRNL PMID 34761906 JRNL DOI 10.1021/ACSINFECDIS.1C00462 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.13_2998 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 71.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.4 REMARK 3 NUMBER OF REFLECTIONS : 35894 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.287 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.860 REMARK 3 FREE R VALUE TEST SET COUNT : 3065 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 71.5500 - 7.8400 0.96 2933 148 0.1515 0.1762 REMARK 3 2 7.8400 - 6.2300 0.91 2760 127 0.1706 0.2668 REMARK 3 3 6.2300 - 5.4400 0.88 2697 136 0.1844 0.2954 REMARK 3 4 5.4400 - 4.9400 0.89 2728 129 0.1673 0.2534 REMARK 3 5 4.9400 - 4.5900 0.91 2795 151 0.1538 0.2287 REMARK 3 6 4.5900 - 4.3200 0.93 2775 139 0.1530 0.2035 REMARK 3 7 4.3200 - 4.1000 0.93 2856 134 0.1648 0.2667 REMARK 3 8 4.1000 - 3.9200 0.93 2860 165 0.1818 0.2955 REMARK 3 9 3.9200 - 3.7700 0.93 2764 151 0.1803 0.2778 REMARK 3 10 3.7700 - 3.6400 0.88 2701 144 0.1982 0.3180 REMARK 3 11 3.6400 - 3.5300 0.86 2587 148 0.2014 0.3147 REMARK 3 12 3.5300 - 3.4300 0.88 2711 129 0.2227 0.3250 REMARK 3 13 3.4300 - 3.3400 0.89 2662 177 0.2557 0.3250 REMARK 3 14 3.3400 - 3.2600 0.85 2557 144 0.2484 0.3576 REMARK 3 15 3.2600 - 3.1800 0.83 2587 128 0.2531 0.3208 REMARK 3 16 3.1800 - 3.1100 0.87 2659 113 0.2463 0.3235 REMARK 3 17 3.1100 - 3.0500 0.88 2630 158 0.2635 0.3774 REMARK 3 18 3.0500 - 2.9900 0.89 2709 139 0.2761 0.3599 REMARK 3 19 2.9900 - 2.9400 0.88 2720 139 0.2702 0.4052 REMARK 3 20 2.9400 - 2.8900 0.89 2702 122 0.2712 0.4315 REMARK 3 21 2.8900 - 2.8400 0.90 2761 138 0.2865 0.3320 REMARK 3 22 2.8400 - 2.8000 0.90 2806 106 0.3103 0.4095 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.466 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.486 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.21 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 10443 REMARK 3 ANGLE : 1.139 14166 REMARK 3 CHIRALITY : 0.123 1634 REMARK 3 PLANARITY : 0.007 1856 REMARK 3 DIHEDRAL : 22.565 3775 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7RUD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1000242558. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36022 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 71.550 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 2.800 REMARK 200 R MERGE (I) : 0.17300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.69400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5CKS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M TRILITHIUM CITRATE TETRAHYDRATE REMARK 280 20% (W/V) PEG 3350 40% (V/V) 1,3-PROPANEDIOL 1.8 MM REMARK 280 TRIFLUOROPYRUVATE OXIME, PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 104.89450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.09500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 104.89450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 26.09500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 TYR A 3 REMARK 465 GLN A 4 REMARK 465 GLU A 313 REMARK 465 SER A 314 REMARK 465 GLY A 315 REMARK 465 GLU A 316 REMARK 465 PRO A 317 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 TYR B 3 REMARK 465 GLN B 4 REMARK 465 ASN B 5 REMARK 465 ASP B 6 REMARK 465 GLY B 350 REMARK 465 GLY C 0 REMARK 465 MET C 1 REMARK 465 ASN C 2 REMARK 465 TYR C 3 REMARK 465 GLN C 4 REMARK 465 GLU C 313 REMARK 465 SER C 314 REMARK 465 GLY C 315 REMARK 465 GLY D 0 REMARK 465 MET D 1 REMARK 465 ASN D 2 REMARK 465 TYR D 3 REMARK 465 GLN D 4 REMARK 465 VAL D 102 REMARK 465 SER D 314 REMARK 465 GLY D 315 REMARK 465 GLY D 350 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 41 CG CD CE NZ REMARK 470 LYS A 45 CG CD CE NZ REMARK 470 LYS A 48 CG CD CE NZ REMARK 470 LYS A 70 NZ REMARK 470 LYS A 214 CG CD CE NZ REMARK 470 LYS A 237 CB CG CD CE NZ REMARK 470 GLU A 238 CG CD OE1 OE2 REMARK 470 GLU A 251 CD OE1 OE2 REMARK 470 LYS A 255 CG CD CE NZ REMARK 470 SER A 272 OG REMARK 470 LYS A 273 CG CD CE NZ REMARK 470 GLN A 274 CD OE1 NE2 REMARK 470 LYS A 294 CE NZ REMARK 470 LEU A 312 CG CD1 CD2 REMARK 470 LEU B 8 CG CD1 CD2 REMARK 470 LYS B 11 CG CD CE NZ REMARK 470 ILE B 89 CD1 REMARK 470 LYS B 194 CG CD CE NZ REMARK 470 LYS B 237 CG CD CE NZ REMARK 470 LYS B 244 CD CE NZ REMARK 470 LYS B 255 CG CD CE NZ REMARK 470 LYS B 277 CG CD CE NZ REMARK 470 ILE B 289 CG1 CG2 CD1 REMARK 470 LYS B 294 CE NZ REMARK 470 GLU B 313 CG CD OE1 OE2 REMARK 470 GLU B 316 CG CD OE1 OE2 REMARK 470 LYS B 322 CE NZ REMARK 470 ASN C 5 CG OD1 ND2 REMARK 470 ASP C 6 CG OD1 OD2 REMARK 470 ASP C 7 CG OD1 OD2 REMARK 470 LYS C 11 CE NZ REMARK 470 LYS C 48 CD CE NZ REMARK 470 LYS C 237 O CG CD CE NZ REMARK 470 LYS C 255 CG CD CE NZ REMARK 470 LYS C 294 CG CD CE NZ REMARK 470 GLU C 316 CG CD OE1 OE2 REMARK 470 ASN D 5 CG OD1 ND2 REMARK 470 ASP D 6 CG OD1 OD2 REMARK 470 LEU D 8 CG CD1 CD2 REMARK 470 LYS D 41 CG CD CE NZ REMARK 470 LYS D 45 CG CD CE NZ REMARK 470 LYS D 84 CE NZ REMARK 470 LYS D 105 CG CD CE NZ REMARK 470 LYS D 186 CE NZ REMARK 470 LYS D 214 CG CD CE NZ REMARK 470 LYS D 237 CG CD CE NZ REMARK 470 GLU D 238 CG CD OE1 OE2 REMARK 470 GLU D 251 CG CD OE1 OE2 REMARK 470 LYS D 255 CG CD CE NZ REMARK 470 SER D 272 OG REMARK 470 LYS D 273 CG CD CE NZ REMARK 470 LEU D 312 CG CD1 CD2 REMARK 470 GLU D 316 CG CD OE1 OE2 REMARK 470 ARG D 349 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 7 18.18 59.16 REMARK 500 GLU A 12 162.00 166.89 REMARK 500 PHE A 26 66.90 -111.87 REMARK 500 ASP A 51 118.80 -161.64 REMARK 500 THR A 101 -69.67 -154.28 REMARK 500 ASN A 109 -70.07 -78.54 REMARK 500 MET A 113 63.73 61.79 REMARK 500 ASP A 114 15.86 -169.85 REMARK 500 GLN A 118 67.53 -59.23 REMARK 500 SER A 136 44.63 -86.79 REMARK 500 ALA A 154 -48.99 -27.07 REMARK 500 TRP A 159 143.94 -170.88 REMARK 500 THR A 189 30.72 -63.99 REMARK 500 ASP A 190 -0.41 -149.67 REMARK 500 ASP A 228 31.16 -86.91 REMARK 500 ALA A 243 -32.23 -38.73 REMARK 500 SER A 267 -158.26 -116.86 REMARK 500 HIS A 268 -84.39 52.21 REMARK 500 SER A 272 39.83 37.46 REMARK 500 LYS A 273 -1.35 78.34 REMARK 500 THR A 325 -111.24 -123.13 REMARK 500 ASN B 50 0.38 -63.17 REMARK 500 ASP B 52 27.10 -142.12 REMARK 500 HIS B 64 -13.97 -144.79 REMARK 500 LYS B 84 -43.16 -9.74 REMARK 500 GLU B 88 78.01 -157.53 REMARK 500 VAL B 93 71.87 -113.05 REMARK 500 THR B 101 -101.85 -142.42 REMARK 500 ASP B 110 68.47 -158.89 REMARK 500 MET B 113 46.08 18.23 REMARK 500 LEU B 145 -71.00 -94.30 REMARK 500 LEU B 153 -10.90 -145.92 REMARK 500 SER B 242 169.92 -23.88 REMARK 500 ALA B 260 49.61 -78.08 REMARK 500 HIS B 268 -127.87 57.47 REMARK 500 LYS B 273 40.57 39.80 REMARK 500 ILE B 296 85.55 -64.37 REMARK 500 LEU B 305 -77.15 -73.56 REMARK 500 ASN B 309 174.12 179.47 REMARK 500 SER B 314 -88.97 -50.88 REMARK 500 GLU B 316 -158.03 -78.40 REMARK 500 THR B 325 -127.49 -117.89 REMARK 500 ASP B 326 150.23 -47.26 REMARK 500 ASP C 7 62.29 15.78 REMARK 500 HIS C 64 -10.44 -159.58 REMARK 500 LYS C 84 4.59 -65.06 REMARK 500 THR C 101 -69.56 -134.44 REMARK 500 ASP C 110 63.09 -158.68 REMARK 500 HIS C 112 30.09 -96.82 REMARK 500 MET C 113 36.19 33.01 REMARK 500 REMARK 500 THIS ENTRY HAS 84 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 7RUD A 1 350 UNP P0AB91 AROG_ECOLI 1 350 DBREF 7RUD B 1 350 UNP P0AB91 AROG_ECOLI 1 350 DBREF 7RUD C 1 350 UNP P0AB91 AROG_ECOLI 1 350 DBREF 7RUD D 1 350 UNP P0AB91 AROG_ECOLI 1 350 SEQADV 7RUD GLY A 0 UNP P0AB91 EXPRESSION TAG SEQADV 7RUD GLY B 0 UNP P0AB91 EXPRESSION TAG SEQADV 7RUD GLY C 0 UNP P0AB91 EXPRESSION TAG SEQADV 7RUD GLY D 0 UNP P0AB91 EXPRESSION TAG SEQRES 1 A 351 GLY MET ASN TYR GLN ASN ASP ASP LEU ARG ILE LYS GLU SEQRES 2 A 351 ILE LYS GLU LEU LEU PRO PRO VAL ALA LEU LEU GLU LYS SEQRES 3 A 351 PHE PRO ALA THR GLU ASN ALA ALA ASN THR VAL ALA HIS SEQRES 4 A 351 ALA ARG LYS ALA ILE HIS LYS ILE LEU LYS GLY ASN ASP SEQRES 5 A 351 ASP ARG LEU LEU VAL VAL ILE GLY PRO CYS SER ILE HIS SEQRES 6 A 351 ASP PRO VAL ALA ALA LYS GLU TYR ALA THR ARG LEU LEU SEQRES 7 A 351 ALA LEU ARG GLU GLU LEU LYS ASP GLU LEU GLU ILE VAL SEQRES 8 A 351 MET ARG VAL TYR PHE GLU LYS PRO ARG THR THR VAL GLY SEQRES 9 A 351 TRP LYS GLY LEU ILE ASN ASP PRO HIS MET ASP ASN SER SEQRES 10 A 351 PHE GLN ILE ASN ASP GLY LEU ARG ILE ALA ARG LYS LEU SEQRES 11 A 351 LEU LEU ASP ILE ASN ASP SER GLY LEU PRO ALA ALA GLY SEQRES 12 A 351 GLU PHE LEU ASP MET ILE THR PRO GLN TYR LEU ALA ASP SEQRES 13 A 351 LEU MET SER TRP GLY ALA ILE GLY ALA ARG THR THR GLU SEQRES 14 A 351 SER GLN VAL HIS ARG GLU LEU ALA SER GLY LEU SER CYS SEQRES 15 A 351 PRO VAL GLY PHE LYS ASN GLY THR ASP GLY THR ILE LYS SEQRES 16 A 351 VAL ALA ILE ASP ALA ILE ASN ALA ALA GLY ALA PRO HIS SEQRES 17 A 351 CYS PHE LEU SER VAL THR LYS TRP GLY HIS SER ALA ILE SEQRES 18 A 351 VAL ASN THR SER GLY ASN GLY ASP CYS HIS ILE ILE LEU SEQRES 19 A 351 ARG GLY GLY LYS GLU PRO ASN TYR SER ALA LYS HIS VAL SEQRES 20 A 351 ALA GLU VAL LYS GLU GLY LEU ASN LYS ALA GLY LEU PRO SEQRES 21 A 351 ALA GLN VAL MET ILE ASP PHE SER HIS ALA ASN SER SER SEQRES 22 A 351 LYS GLN PHE LYS LYS GLN MET ASP VAL CYS ALA ASP VAL SEQRES 23 A 351 CYS GLN GLN ILE ALA GLY GLY GLU LYS ALA ILE ILE GLY SEQRES 24 A 351 VAL MET VAL GLU SER HIS LEU VAL GLU GLY ASN GLN SER SEQRES 25 A 351 LEU GLU SER GLY GLU PRO LEU ALA TYR GLY LYS SER ILE SEQRES 26 A 351 THR ASP ALA CYS ILE GLY TRP GLU ASP THR ASP ALA LEU SEQRES 27 A 351 LEU ARG GLN LEU ALA ASN ALA VAL LYS ALA ARG ARG GLY SEQRES 1 B 351 GLY MET ASN TYR GLN ASN ASP ASP LEU ARG ILE LYS GLU SEQRES 2 B 351 ILE LYS GLU LEU LEU PRO PRO VAL ALA LEU LEU GLU LYS SEQRES 3 B 351 PHE PRO ALA THR GLU ASN ALA ALA ASN THR VAL ALA HIS SEQRES 4 B 351 ALA ARG LYS ALA ILE HIS LYS ILE LEU LYS GLY ASN ASP SEQRES 5 B 351 ASP ARG LEU LEU VAL VAL ILE GLY PRO CYS SER ILE HIS SEQRES 6 B 351 ASP PRO VAL ALA ALA LYS GLU TYR ALA THR ARG LEU LEU SEQRES 7 B 351 ALA LEU ARG GLU GLU LEU LYS ASP GLU LEU GLU ILE VAL SEQRES 8 B 351 MET ARG VAL TYR PHE GLU LYS PRO ARG THR THR VAL GLY SEQRES 9 B 351 TRP LYS GLY LEU ILE ASN ASP PRO HIS MET ASP ASN SER SEQRES 10 B 351 PHE GLN ILE ASN ASP GLY LEU ARG ILE ALA ARG LYS LEU SEQRES 11 B 351 LEU LEU ASP ILE ASN ASP SER GLY LEU PRO ALA ALA GLY SEQRES 12 B 351 GLU PHE LEU ASP MET ILE THR PRO GLN TYR LEU ALA ASP SEQRES 13 B 351 LEU MET SER TRP GLY ALA ILE GLY ALA ARG THR THR GLU SEQRES 14 B 351 SER GLN VAL HIS ARG GLU LEU ALA SER GLY LEU SER CYS SEQRES 15 B 351 PRO VAL GLY PHE LYS ASN GLY THR ASP GLY THR ILE LYS SEQRES 16 B 351 VAL ALA ILE ASP ALA ILE ASN ALA ALA GLY ALA PRO HIS SEQRES 17 B 351 CYS PHE LEU SER VAL THR LYS TRP GLY HIS SER ALA ILE SEQRES 18 B 351 VAL ASN THR SER GLY ASN GLY ASP CYS HIS ILE ILE LEU SEQRES 19 B 351 ARG GLY GLY LYS GLU PRO ASN TYR SER ALA LYS HIS VAL SEQRES 20 B 351 ALA GLU VAL LYS GLU GLY LEU ASN LYS ALA GLY LEU PRO SEQRES 21 B 351 ALA GLN VAL MET ILE ASP PHE SER HIS ALA ASN SER SER SEQRES 22 B 351 LYS GLN PHE LYS LYS GLN MET ASP VAL CYS ALA ASP VAL SEQRES 23 B 351 CYS GLN GLN ILE ALA GLY GLY GLU LYS ALA ILE ILE GLY SEQRES 24 B 351 VAL MET VAL GLU SER HIS LEU VAL GLU GLY ASN GLN SER SEQRES 25 B 351 LEU GLU SER GLY GLU PRO LEU ALA TYR GLY LYS SER ILE SEQRES 26 B 351 THR ASP ALA CYS ILE GLY TRP GLU ASP THR ASP ALA LEU SEQRES 27 B 351 LEU ARG GLN LEU ALA ASN ALA VAL LYS ALA ARG ARG GLY SEQRES 1 C 351 GLY MET ASN TYR GLN ASN ASP ASP LEU ARG ILE LYS GLU SEQRES 2 C 351 ILE LYS GLU LEU LEU PRO PRO VAL ALA LEU LEU GLU LYS SEQRES 3 C 351 PHE PRO ALA THR GLU ASN ALA ALA ASN THR VAL ALA HIS SEQRES 4 C 351 ALA ARG LYS ALA ILE HIS LYS ILE LEU LYS GLY ASN ASP SEQRES 5 C 351 ASP ARG LEU LEU VAL VAL ILE GLY PRO CYS SER ILE HIS SEQRES 6 C 351 ASP PRO VAL ALA ALA LYS GLU TYR ALA THR ARG LEU LEU SEQRES 7 C 351 ALA LEU ARG GLU GLU LEU LYS ASP GLU LEU GLU ILE VAL SEQRES 8 C 351 MET ARG VAL TYR PHE GLU LYS PRO ARG THR THR VAL GLY SEQRES 9 C 351 TRP LYS GLY LEU ILE ASN ASP PRO HIS MET ASP ASN SER SEQRES 10 C 351 PHE GLN ILE ASN ASP GLY LEU ARG ILE ALA ARG LYS LEU SEQRES 11 C 351 LEU LEU ASP ILE ASN ASP SER GLY LEU PRO ALA ALA GLY SEQRES 12 C 351 GLU PHE LEU ASP MET ILE THR PRO GLN TYR LEU ALA ASP SEQRES 13 C 351 LEU MET SER TRP GLY ALA ILE GLY ALA ARG THR THR GLU SEQRES 14 C 351 SER GLN VAL HIS ARG GLU LEU ALA SER GLY LEU SER CYS SEQRES 15 C 351 PRO VAL GLY PHE LYS ASN GLY THR ASP GLY THR ILE LYS SEQRES 16 C 351 VAL ALA ILE ASP ALA ILE ASN ALA ALA GLY ALA PRO HIS SEQRES 17 C 351 CYS PHE LEU SER VAL THR LYS TRP GLY HIS SER ALA ILE SEQRES 18 C 351 VAL ASN THR SER GLY ASN GLY ASP CYS HIS ILE ILE LEU SEQRES 19 C 351 ARG GLY GLY LYS GLU PRO ASN TYR SER ALA LYS HIS VAL SEQRES 20 C 351 ALA GLU VAL LYS GLU GLY LEU ASN LYS ALA GLY LEU PRO SEQRES 21 C 351 ALA GLN VAL MET ILE ASP PHE SER HIS ALA ASN SER SER SEQRES 22 C 351 LYS GLN PHE LYS LYS GLN MET ASP VAL CYS ALA ASP VAL SEQRES 23 C 351 CYS GLN GLN ILE ALA GLY GLY GLU LYS ALA ILE ILE GLY SEQRES 24 C 351 VAL MET VAL GLU SER HIS LEU VAL GLU GLY ASN GLN SER SEQRES 25 C 351 LEU GLU SER GLY GLU PRO LEU ALA TYR GLY LYS SER ILE SEQRES 26 C 351 THR ASP ALA CYS ILE GLY TRP GLU ASP THR ASP ALA LEU SEQRES 27 C 351 LEU ARG GLN LEU ALA ASN ALA VAL LYS ALA ARG ARG GLY SEQRES 1 D 351 GLY MET ASN TYR GLN ASN ASP ASP LEU ARG ILE LYS GLU SEQRES 2 D 351 ILE LYS GLU LEU LEU PRO PRO VAL ALA LEU LEU GLU LYS SEQRES 3 D 351 PHE PRO ALA THR GLU ASN ALA ALA ASN THR VAL ALA HIS SEQRES 4 D 351 ALA ARG LYS ALA ILE HIS LYS ILE LEU LYS GLY ASN ASP SEQRES 5 D 351 ASP ARG LEU LEU VAL VAL ILE GLY PRO CYS SER ILE HIS SEQRES 6 D 351 ASP PRO VAL ALA ALA LYS GLU TYR ALA THR ARG LEU LEU SEQRES 7 D 351 ALA LEU ARG GLU GLU LEU LYS ASP GLU LEU GLU ILE VAL SEQRES 8 D 351 MET ARG VAL TYR PHE GLU LYS PRO ARG THR THR VAL GLY SEQRES 9 D 351 TRP LYS GLY LEU ILE ASN ASP PRO HIS MET ASP ASN SER SEQRES 10 D 351 PHE GLN ILE ASN ASP GLY LEU ARG ILE ALA ARG LYS LEU SEQRES 11 D 351 LEU LEU ASP ILE ASN ASP SER GLY LEU PRO ALA ALA GLY SEQRES 12 D 351 GLU PHE LEU ASP MET ILE THR PRO GLN TYR LEU ALA ASP SEQRES 13 D 351 LEU MET SER TRP GLY ALA ILE GLY ALA ARG THR THR GLU SEQRES 14 D 351 SER GLN VAL HIS ARG GLU LEU ALA SER GLY LEU SER CYS SEQRES 15 D 351 PRO VAL GLY PHE LYS ASN GLY THR ASP GLY THR ILE LYS SEQRES 16 D 351 VAL ALA ILE ASP ALA ILE ASN ALA ALA GLY ALA PRO HIS SEQRES 17 D 351 CYS PHE LEU SER VAL THR LYS TRP GLY HIS SER ALA ILE SEQRES 18 D 351 VAL ASN THR SER GLY ASN GLY ASP CYS HIS ILE ILE LEU SEQRES 19 D 351 ARG GLY GLY LYS GLU PRO ASN TYR SER ALA LYS HIS VAL SEQRES 20 D 351 ALA GLU VAL LYS GLU GLY LEU ASN LYS ALA GLY LEU PRO SEQRES 21 D 351 ALA GLN VAL MET ILE ASP PHE SER HIS ALA ASN SER SER SEQRES 22 D 351 LYS GLN PHE LYS LYS GLN MET ASP VAL CYS ALA ASP VAL SEQRES 23 D 351 CYS GLN GLN ILE ALA GLY GLY GLU LYS ALA ILE ILE GLY SEQRES 24 D 351 VAL MET VAL GLU SER HIS LEU VAL GLU GLY ASN GLN SER SEQRES 25 D 351 LEU GLU SER GLY GLU PRO LEU ALA TYR GLY LYS SER ILE SEQRES 26 D 351 THR ASP ALA CYS ILE GLY TRP GLU ASP THR ASP ALA LEU SEQRES 27 D 351 LEU ARG GLN LEU ALA ASN ALA VAL LYS ALA ARG ARG GLY HET 7QE B 401 11 HET 7QE C 401 11 HET 7QE D 401 11 HETNAM 7QE (2Z)-3,3,3-TRIFLUORO-2-(HYDROXYIMINO)PROPANOIC ACID FORMUL 5 7QE 3(C3 H2 F3 N O3) FORMUL 8 HOH *58(H2 O) HELIX 1 AA1 PRO A 18 PHE A 26 1 9 HELIX 2 AA2 THR A 29 LYS A 48 1 20 HELIX 3 AA3 ASP A 65 LYS A 84 1 20 HELIX 4 AA4 GLN A 118 SER A 136 1 19 HELIX 5 AA5 THR A 149 ALA A 154 1 6 HELIX 6 AA6 ASP A 155 MET A 157 5 3 HELIX 7 AA7 GLY A 163 THR A 167 5 5 HELIX 8 AA8 SER A 169 SER A 177 1 9 HELIX 9 AA9 ILE A 193 ALA A 205 1 13 HELIX 10 AB1 SER A 242 ALA A 256 1 15 HELIX 11 AB2 LYS A 276 GLY A 292 1 17 HELIX 12 AB3 GLY A 330 GLY A 350 1 21 HELIX 13 AB4 PRO B 18 PHE B 26 1 9 HELIX 14 AB5 THR B 29 LYS B 48 1 20 HELIX 15 AB6 ASP B 65 LYS B 84 1 20 HELIX 16 AB7 GLN B 118 SER B 136 1 19 HELIX 17 AB8 ILE B 148 MET B 157 5 10 HELIX 18 AB9 SER B 169 SER B 177 1 9 HELIX 19 AC1 ILE B 193 ALA B 205 1 13 HELIX 20 AC2 SER B 242 GLY B 257 1 16 HELIX 21 AC3 SER B 267 SER B 272 1 6 HELIX 22 AC4 GLN B 274 LYS B 276 5 3 HELIX 23 AC5 LYS B 277 GLY B 291 1 15 HELIX 24 AC6 GLY B 330 ARG B 348 1 19 HELIX 25 AC7 PRO C 18 PHE C 26 1 9 HELIX 26 AC8 THR C 29 LYS C 48 1 20 HELIX 27 AC9 ASP C 65 LEU C 83 1 19 HELIX 28 AD1 GLN C 118 SER C 136 1 19 HELIX 29 AD2 THR C 149 ALA C 154 1 6 HELIX 30 AD3 GLY C 163 THR C 167 5 5 HELIX 31 AD4 SER C 169 SER C 177 1 9 HELIX 32 AD5 ILE C 193 GLY C 204 1 12 HELIX 33 AD6 SER C 242 ALA C 256 1 15 HELIX 34 AD7 SER C 267 SER C 271 5 5 HELIX 35 AD8 LYS C 276 GLY C 291 1 16 HELIX 36 AD9 GLY C 330 ALA C 347 1 18 HELIX 37 AE1 PRO D 18 PHE D 26 1 9 HELIX 38 AE2 THR D 29 LYS D 48 1 20 HELIX 39 AE3 ASP D 65 LEU D 83 1 19 HELIX 40 AE4 GLN D 118 SER D 136 1 19 HELIX 41 AE5 ILE D 148 ASP D 155 5 8 HELIX 42 AE6 GLY D 163 THR D 167 5 5 HELIX 43 AE7 SER D 169 GLY D 178 1 10 HELIX 44 AE8 ILE D 193 GLY D 204 1 12 HELIX 45 AE9 ALA D 243 ALA D 256 1 14 HELIX 46 AF1 SER D 267 SER D 271 5 5 HELIX 47 AF2 LYS D 276 GLY D 292 1 17 HELIX 48 AF3 GLY D 330 ARG D 348 1 19 SHEET 1 AA1 3 ILE A 10 GLU A 15 0 SHEET 2 AA1 3 SER B 218 THR B 223 -1 O ASN B 222 N GLU A 12 SHEET 3 AA1 3 CYS B 208 VAL B 212 -1 N PHE B 209 O VAL B 221 SHEET 1 AA2 9 LEU A 54 GLY A 59 0 SHEET 2 AA2 9 LEU A 87 ARG A 92 1 O GLU A 88 N VAL A 56 SHEET 3 AA2 9 ALA A 140 GLU A 143 1 O ALA A 141 N MET A 91 SHEET 4 AA2 9 TRP A 159 ILE A 162 1 O TRP A 159 N GLY A 142 SHEET 5 AA2 9 VAL A 183 LYS A 186 1 O GLY A 184 N GLY A 160 SHEET 6 AA2 9 CYS A 229 LEU A 233 1 O HIS A 230 N PHE A 185 SHEET 7 AA2 9 VAL A 262 ASP A 265 1 O MET A 263 N LEU A 233 SHEET 8 AA2 9 ILE A 296 GLU A 302 1 O ILE A 297 N VAL A 262 SHEET 9 AA2 9 LEU A 54 GLY A 59 1 N LEU A 55 O ILE A 297 SHEET 1 AA3 3 CYS A 208 VAL A 212 0 SHEET 2 AA3 3 SER A 218 THR A 223 -1 O VAL A 221 N PHE A 209 SHEET 3 AA3 3 ILE B 10 GLU B 15 -1 O LYS B 14 N ILE A 220 SHEET 1 AA4 2 VAL A 306 ASN A 309 0 SHEET 2 AA4 2 LYS A 322 SER A 323 1 O SER A 323 N VAL A 306 SHEET 1 AA5 9 LEU B 54 GLY B 59 0 SHEET 2 AA5 9 LEU B 87 ARG B 92 1 O VAL B 90 N VAL B 56 SHEET 3 AA5 9 ALA B 140 GLU B 143 1 O ALA B 141 N MET B 91 SHEET 4 AA5 9 TRP B 159 ILE B 162 1 O ALA B 161 N GLY B 142 SHEET 5 AA5 9 VAL B 183 LYS B 186 1 O GLY B 184 N GLY B 160 SHEET 6 AA5 9 CYS B 229 LEU B 233 1 O ILE B 232 N PHE B 185 SHEET 7 AA5 9 VAL B 262 ASP B 265 1 O ASP B 265 N LEU B 233 SHEET 8 AA5 9 ILE B 296 GLU B 302 1 O MET B 300 N ILE B 264 SHEET 9 AA5 9 LEU B 54 GLY B 59 1 N GLY B 59 O VAL B 301 SHEET 1 AA6 3 ILE C 10 LYS C 14 0 SHEET 2 AA6 3 SER D 218 THR D 223 -1 O ASN D 222 N LYS C 11 SHEET 3 AA6 3 CYS D 208 VAL D 212 -1 N PHE D 209 O VAL D 221 SHEET 1 AA7 9 LEU C 54 GLY C 59 0 SHEET 2 AA7 9 LEU C 87 ARG C 92 1 O GLU C 88 N LEU C 54 SHEET 3 AA7 9 ALA C 140 GLU C 143 1 O ALA C 141 N MET C 91 SHEET 4 AA7 9 MET C 157 ILE C 162 1 O SER C 158 N ALA C 140 SHEET 5 AA7 9 VAL C 183 LYS C 186 1 O GLY C 184 N GLY C 160 SHEET 6 AA7 9 CYS C 229 LEU C 233 1 O HIS C 230 N PHE C 185 SHEET 7 AA7 9 VAL C 262 ASP C 265 1 O ASP C 265 N LEU C 233 SHEET 8 AA7 9 ILE C 296 GLU C 302 1 O GLY C 298 N ILE C 264 SHEET 9 AA7 9 LEU C 54 GLY C 59 1 N VAL C 57 O VAL C 299 SHEET 1 AA8 3 CYS C 208 VAL C 212 0 SHEET 2 AA8 3 SER C 218 THR C 223 -1 O VAL C 221 N PHE C 209 SHEET 3 AA8 3 ILE D 10 GLU D 15 -1 O LYS D 14 N ILE C 220 SHEET 1 AA9 9 LEU D 54 GLY D 59 0 SHEET 2 AA9 9 LEU D 87 ARG D 92 1 O VAL D 90 N VAL D 56 SHEET 3 AA9 9 ALA D 140 GLU D 143 1 O ALA D 141 N MET D 91 SHEET 4 AA9 9 MET D 157 ILE D 162 1 O SER D 158 N ALA D 140 SHEET 5 AA9 9 VAL D 183 LYS D 186 1 O GLY D 184 N GLY D 160 SHEET 6 AA9 9 CYS D 229 LEU D 233 1 O HIS D 230 N PHE D 185 SHEET 7 AA9 9 VAL D 262 ASP D 265 1 O MET D 263 N LEU D 233 SHEET 8 AA9 9 ILE D 296 GLU D 302 1 O GLY D 298 N ILE D 264 SHEET 9 AA9 9 LEU D 54 GLY D 59 1 N VAL D 57 O VAL D 299 CRYST1 209.789 52.190 149.800 90.00 115.82 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004767 0.000000 0.002306 0.00000 SCALE2 0.000000 0.019161 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007416 0.00000