HEADER TRANSCRIPTION 18-AUG-21 7RV7 TITLE CRYSTAL STRUCTURE OF THE BCL6 BTB DOMAIN IN COMPLEX WITH OICR-9322 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOFORM 2 OF B-CELL LYMPHOMA 6 PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BCL-6,B-CELL LYMPHOMA 5 PROTEIN,BCL-5,PROTEIN LAZ-3,ZINC COMPND 5 FINGER AND BTB DOMAIN-CONTAINING PROTEIN 27,ZINC FINGER PROTEIN 51; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BCL6, BCL5, LAZ3, ZBTB27, ZNF51; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS IMMUNITY, INFLAMMATORY RESPONSE, TRANSCRIPTION REPRESSOR, KEYWDS 2 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR D.A.KUNTZ,G.G.PRIVE REVDAT 1 24-AUG-22 7RV7 0 JRNL AUTH I.WATSON,M.ISAAC JRNL TITL STRUCTURE OF THE BCL6 BTB DOMAIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.63 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1_4122 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.63 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 14238 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.250 REMARK 3 FREE R VALUE TEST SET COUNT : 748 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.2600 - 2.7900 0.98 2697 169 0.1592 0.1927 REMARK 3 2 2.7900 - 2.2100 0.98 2709 139 0.1647 0.1745 REMARK 3 3 2.2100 - 1.9300 0.99 2686 136 0.1496 0.1981 REMARK 3 4 1.9300 - 1.7600 0.99 2724 156 0.1745 0.2136 REMARK 3 5 1.7600 - 1.6300 0.98 2674 148 0.2042 0.2527 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.530 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 7 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3241 -0.8661 30.1530 REMARK 3 T TENSOR REMARK 3 T11: 0.1520 T22: 0.1820 REMARK 3 T33: 0.1261 T12: -0.0154 REMARK 3 T13: -0.0185 T23: 0.0185 REMARK 3 L TENSOR REMARK 3 L11: 6.3586 L22: 7.3962 REMARK 3 L33: 4.3507 L12: -3.6066 REMARK 3 L13: -2.1590 L23: 1.9680 REMARK 3 S TENSOR REMARK 3 S11: 0.0624 S12: 0.1834 S13: 0.3271 REMARK 3 S21: -0.0141 S22: -0.0762 S23: -0.0701 REMARK 3 S31: -0.4864 S32: 0.0175 S33: -0.1070 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 29 THROUGH 40 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.8852 -16.9660 18.2451 REMARK 3 T TENSOR REMARK 3 T11: 0.1663 T22: 0.2270 REMARK 3 T33: 0.2608 T12: 0.0515 REMARK 3 T13: 0.0187 T23: -0.0366 REMARK 3 L TENSOR REMARK 3 L11: 1.9815 L22: 3.1174 REMARK 3 L33: 3.4140 L12: 1.5394 REMARK 3 L13: 0.1759 L23: -1.3849 REMARK 3 S TENSOR REMARK 3 S11: -0.1650 S12: -0.1971 S13: -0.1442 REMARK 3 S21: -0.1727 S22: 0.1972 S23: -0.1439 REMARK 3 S31: 0.6899 S32: 0.4641 S33: 0.1174 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 41 THROUGH 92 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.2373 -12.7070 13.5615 REMARK 3 T TENSOR REMARK 3 T11: 0.1280 T22: 0.1613 REMARK 3 T33: 0.1709 T12: -0.0069 REMARK 3 T13: -0.0005 T23: -0.0411 REMARK 3 L TENSOR REMARK 3 L11: 1.3785 L22: 1.6648 REMARK 3 L33: 3.8434 L12: -0.7391 REMARK 3 L13: -0.4240 L23: -0.3151 REMARK 3 S TENSOR REMARK 3 S11: -0.0399 S12: 0.0976 S13: -0.3502 REMARK 3 S21: -0.0756 S22: -0.0001 S23: 0.0950 REMARK 3 S31: 0.2918 S32: 0.0796 S33: -0.0029 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 93 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.9220 3.8843 13.0441 REMARK 3 T TENSOR REMARK 3 T11: 0.2411 T22: 0.4141 REMARK 3 T33: 0.2198 T12: -0.1455 REMARK 3 T13: -0.0192 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 0.6654 L22: 2.0887 REMARK 3 L33: 4.3807 L12: -0.0302 REMARK 3 L13: -1.1558 L23: -2.1732 REMARK 3 S TENSOR REMARK 3 S11: 0.1342 S12: -0.4806 S13: -0.0191 REMARK 3 S21: 0.3378 S22: -0.1629 S23: -0.2987 REMARK 3 S31: -0.4446 S32: 1.2588 S33: 0.1327 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 102 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.3511 -2.8919 5.4468 REMARK 3 T TENSOR REMARK 3 T11: 0.1941 T22: 0.2587 REMARK 3 T33: 0.1752 T12: -0.0112 REMARK 3 T13: -0.0152 T23: -0.0015 REMARK 3 L TENSOR REMARK 3 L11: 4.3460 L22: 3.9705 REMARK 3 L33: 4.7449 L12: 0.2679 REMARK 3 L13: -1.5076 L23: 0.5538 REMARK 3 S TENSOR REMARK 3 S11: -0.1000 S12: 0.1889 S13: 0.1027 REMARK 3 S21: -0.3285 S22: -0.0656 S23: -0.1837 REMARK 3 S31: -0.1415 S32: 0.1971 S33: 0.1041 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.7464 7.7154 6.2976 REMARK 3 T TENSOR REMARK 3 T11: 0.3311 T22: 0.2232 REMARK 3 T33: 0.2306 T12: -0.0246 REMARK 3 T13: 0.0087 T23: -0.0177 REMARK 3 L TENSOR REMARK 3 L11: 6.9777 L22: 6.9080 REMARK 3 L33: 4.9315 L12: 6.6821 REMARK 3 L13: -5.5939 L23: -5.8332 REMARK 3 S TENSOR REMARK 3 S11: 0.3893 S12: -0.2338 S13: 0.6503 REMARK 3 S21: 0.2745 S22: -0.1766 S23: 0.2567 REMARK 3 S31: -0.9612 S32: 0.0372 S33: -0.1663 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7RV7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1000259035. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.1.29 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14298 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.630 REMARK 200 RESOLUTION RANGE LOW (A) : 37.470 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.34700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PRECIPITANT SOLUTION WAS 16-20% PEG 8K REMARK 280 IN 0.1M PH 6. BISTRIS BUFFER. CRYSTALS WERE SOAKED IN 0.1M HEPES REMARK 280 7.4, 20% PEG 8K, 25% GLYCEROL 0.5 MM LIGAND PRIOR TO PASSAGE REMARK 280 THROUGH PARATONE AND FREEZING., MICROBATCH, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 15.27800 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.47150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 15.27800 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 37.47150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -13.66729 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 51.29337 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CA CA A 204 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 331 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 353 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 379 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 ASP A 6 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 40 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 13 OD2 ASP A 17 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 39 -123.47 56.73 REMARK 500 SER A 93 -1.00 77.58 REMARK 500 GLN A 113 66.25 64.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 204 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 75 OD1 REMARK 620 2 ASP A 75 OD1 0.0 REMARK 620 3 GOL A 203 O1 16.4 16.4 REMARK 620 4 GOL A 203 O2 19.7 19.7 3.3 REMARK 620 5 GOL A 203 O3 20.1 20.1 4.0 1.8 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7LWE RELATED DB: PDB REMARK 900 WITH RELATED COMPOUND REMARK 900 RELATED ID: 7LWF RELATED DB: PDB REMARK 900 WITH RELATED COMPOUND REMARK 900 RELATED ID: 7LWG RELATED DB: PDB REMARK 900 WITH RELATED COMPOUND DBREF 7RV7 A 5 129 UNP P41182 BCL6_HUMAN 5 129 SEQADV 7RV7 GLY A 3 UNP P41182 EXPRESSION TAG SEQADV 7RV7 SER A 4 UNP P41182 EXPRESSION TAG SEQADV 7RV7 GLN A 8 UNP P41182 CYS 8 ENGINEERED MUTATION SEQADV 7RV7 ARG A 67 UNP P41182 CYS 67 ENGINEERED MUTATION SEQADV 7RV7 ASN A 84 UNP P41182 CYS 84 ENGINEERED MUTATION SEQRES 1 A 127 GLY SER ALA ASP SER GLN ILE GLN PHE THR ARG HIS ALA SEQRES 2 A 127 SER ASP VAL LEU LEU ASN LEU ASN ARG LEU ARG SER ARG SEQRES 3 A 127 ASP ILE LEU THR ASP VAL VAL ILE VAL VAL SER ARG GLU SEQRES 4 A 127 GLN PHE ARG ALA HIS LYS THR VAL LEU MET ALA CYS SER SEQRES 5 A 127 GLY LEU PHE TYR SER ILE PHE THR ASP GLN LEU LYS ARG SEQRES 6 A 127 ASN LEU SER VAL ILE ASN LEU ASP PRO GLU ILE ASN PRO SEQRES 7 A 127 GLU GLY PHE ASN ILE LEU LEU ASP PHE MET TYR THR SER SEQRES 8 A 127 ARG LEU ASN LEU ARG GLU GLY ASN ILE MET ALA VAL MET SEQRES 9 A 127 ALA THR ALA MET TYR LEU GLN MET GLU HIS VAL VAL ASP SEQRES 10 A 127 THR CYS ARG LYS PHE ILE LYS ALA SER GLU HET 7SH A 201 39 HET GOL A 202 14 HET GOL A 203 11 HET CA A 204 1 HETNAM 7SH N-(3-CHLOROPYRIDIN-4-YL)-2-{5-(3-CYANO-4- HETNAM 2 7SH HYDROXYPHENYL)-3-[3-(1-METHYL-1H-PYRAZOL-4-YL)PROP-2- HETNAM 3 7SH YN-1-YL]-4-OXO-3,4-DIHYDRO-7H-PYRROLO[2,3-D]PYRIMIDIN- HETNAM 4 7SH 7-YL}ACETAMIDE HETNAM GOL GLYCEROL HETNAM CA CALCIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 7SH C27 H19 CL N8 O3 FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 CA CA 2+ FORMUL 6 HOH *82(H2 O) HELIX 1 AA1 ARG A 13 ARG A 28 1 16 HELIX 2 AA2 HIS A 46 SER A 54 1 9 HELIX 3 AA3 SER A 54 ASP A 63 1 10 HELIX 4 AA4 ASN A 79 SER A 93 1 15 HELIX 5 AA5 ASN A 101 GLN A 113 1 13 HELIX 6 AA6 MET A 114 ALA A 127 1 14 SHEET 1 AA1 3 GLU A 41 ALA A 45 0 SHEET 2 AA1 3 VAL A 34 VAL A 38 -1 N ILE A 36 O PHE A 43 SHEET 3 AA1 3 VAL A 71 ASN A 73 1 O ILE A 72 N VAL A 37 LINK OD1 ASP A 75 CA CA A 204 1555 1555 2.50 LINK OD1 ASP A 75 CA CA A 204 1555 2555 2.50 LINK O1 GOL A 203 CA CA A 204 1555 3555 2.45 LINK O2 GOL A 203 CA CA A 204 1555 3555 2.45 LINK O3 GOL A 203 CA CA A 204 1555 3555 2.42 CRYST1 30.556 74.943 53.083 90.00 104.92 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.032727 0.000000 0.008720 0.00000 SCALE2 0.000000 0.013343 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019496 0.00000