HEADER METAL BINDING PROTEIN 20-AUG-21 7RWV TITLE CRYSTAL STRUCTURE OF A METAL-FREE RIDC1 VARIANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: SOLUBLE CYTOCHROME B562; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: CYTOCHROME B-562; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: CYBC; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.KAKKIS,E.GOLUB REVDAT 4 13-NOV-24 7RWV 1 REMARK REVDAT 3 25-OCT-23 7RWV 1 REMARK REVDAT 2 11-JAN-23 7RWV 1 JRNL REVDAT 1 29-JUN-22 7RWV 0 JRNL AUTH A.KAKKIS,E.GOLUB,T.S.CHOI,F.A.TEZCAN JRNL TITL REDOX- AND METAL-DIRECTED STRUCTURAL DIVERSIFICATION IN JRNL TITL 2 DESIGNED METALLOPROTEIN ASSEMBLIES. JRNL REF CHEM.COMMUN.(CAMB.) V. 58 6958 2022 JRNL REFN ESSN 1364-548X JRNL PMID 35642584 JRNL DOI 10.1039/D2CC02440C REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 19413 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.160 REMARK 3 FREE R VALUE TEST SET COUNT : 1001 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.2900 - 4.2100 0.99 2650 151 0.1557 0.2001 REMARK 3 2 4.2100 - 3.3400 0.99 2666 104 0.1605 0.2154 REMARK 3 3 3.3400 - 2.9200 0.99 2679 108 0.1880 0.2438 REMARK 3 4 2.9200 - 2.6500 1.00 2598 170 0.1955 0.2712 REMARK 3 5 2.6500 - 2.4600 0.99 2646 149 0.1978 0.2971 REMARK 3 6 2.4600 - 2.3200 0.99 2591 152 0.2834 0.3567 REMARK 3 7 2.3200 - 2.2000 0.99 2582 167 0.3361 0.3294 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.286 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.241 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 3551 REMARK 3 ANGLE : 1.871 4867 REMARK 3 CHIRALITY : 0.079 495 REMARK 3 PLANARITY : 0.012 633 REMARK 3 DIHEDRAL : 26.353 1269 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7RWV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1000258881. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19413 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 46.290 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.15000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 3.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.54400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2BC5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG400, 0.1 M HEPES, 0.2 M MGCL2, REMARK 280 PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 46.29000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 46.29000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 45.63000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 46.29000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 46.29000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 45.63000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 46.29000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 46.29000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 45.63000 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 46.29000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 46.29000 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 45.63000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -124.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 27 ND2 ASN A 80 1.54 REMARK 500 NZ LYS A 15 O HOH A 301 1.88 REMARK 500 N ASP B 21 OE1 GLN B 25 1.90 REMARK 500 O HOH C 303 O HOH C 343 1.91 REMARK 500 OD1 ASP A 2 O HOH A 302 1.93 REMARK 500 O HOH A 358 O HOH B 327 1.98 REMARK 500 OE2 GLU A 8 O HOH A 303 1.98 REMARK 500 OH TYR B 105 O HOH B 301 2.00 REMARK 500 O HOH A 366 O HOH B 333 2.00 REMARK 500 O1A HEC C 201 O HOH C 301 2.01 REMARK 500 NE2 GLN D 103 O HOH D 301 2.04 REMARK 500 O LEU B 14 O HOH B 302 2.04 REMARK 500 OD2 ASP B 5 O HOH B 303 2.06 REMARK 500 SG CYS B 101 CAC HEC B 201 2.06 REMARK 500 O HOH A 345 O HOH A 376 2.08 REMARK 500 O HOH A 343 O HOH A 367 2.10 REMARK 500 SG CYS A 98 CAB HEC A 201 2.12 REMARK 500 SG CYS A 101 CAC HEC A 201 2.13 REMARK 500 NH1 ARG D 106 O HOH D 302 2.15 REMARK 500 ND1 HIS A 77 O HOH A 304 2.17 REMARK 500 O HOH A 311 O HOH A 371 2.17 REMARK 500 SG CYS C 101 CAC HEC C 201 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 12 O HOH A 301 4675 1.98 REMARK 500 NZ LYS B 15 OD2 ASP C 2 3745 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 18 CD GLU A 18 OE2 0.096 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 98 CA - CB - SG ANGL. DEV. = 6.6 DEGREES REMARK 500 GLN A 103 CA - CB - CG ANGL. DEV. = -17.7 DEGREES REMARK 500 GLU B 8 CB - CA - C ANGL. DEV. = 15.9 DEGREES REMARK 500 GLU B 8 CA - CB - CG ANGL. DEV. = 15.0 DEGREES REMARK 500 LYS B 15 CA - CB - CG ANGL. DEV. = -14.4 DEGREES REMARK 500 MET B 58 CA - CB - CG ANGL. DEV. = 11.6 DEGREES REMARK 500 LYS B 95 CA - CB - CG ANGL. DEV. = 15.6 DEGREES REMARK 500 GLU C 4 CA - CB - CG ANGL. DEV. = 16.6 DEGREES REMARK 500 GLU C 8 CA - CB - CG ANGL. DEV. = -26.8 DEGREES REMARK 500 LEU C 94 CA - CB - CG ANGL. DEV. = 17.3 DEGREES REMARK 500 LYS C 95 CB - CA - C ANGL. DEV. = -12.1 DEGREES REMARK 500 LYS C 95 CA - CB - CG ANGL. DEV. = 23.3 DEGREES REMARK 500 LYS C 95 CB - CG - CD ANGL. DEV. = -23.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 GLU A 18 0.08 SIDE CHAIN REMARK 500 GLN A 103 0.08 SIDE CHAIN REMARK 500 GLU B 8 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 7 SD REMARK 620 2 HEC A 201 NA 89.1 REMARK 620 3 HEC A 201 NB 87.7 89.5 REMARK 620 4 HEC A 201 NC 90.8 179.1 91.3 REMARK 620 5 HEC A 201 ND 87.5 90.8 175.2 88.4 REMARK 620 6 HIS A 102 NE2 177.3 89.2 90.2 90.9 94.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC B 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET B 7 SD REMARK 620 2 HEC B 201 NA 88.9 REMARK 620 3 HEC B 201 NB 91.0 87.8 REMARK 620 4 HEC B 201 NC 95.5 173.2 97.4 REMARK 620 5 HEC B 201 ND 89.8 90.9 178.5 83.9 REMARK 620 6 HIS B 102 NE2 175.5 86.6 88.4 89.0 90.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC C 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET C 7 SD REMARK 620 2 HEC C 201 NA 91.2 REMARK 620 3 HEC C 201 NB 88.5 87.9 REMARK 620 4 HEC C 201 NC 90.5 178.2 91.6 REMARK 620 5 HEC C 201 ND 92.0 93.9 178.2 86.7 REMARK 620 6 HIS C 102 NE2 171.9 90.8 83.7 87.4 95.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEC D 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET D 7 SD REMARK 620 2 HEC D 201 NA 91.7 REMARK 620 3 HEC D 201 NB 85.0 82.2 REMARK 620 4 HEC D 201 NC 87.5 178.8 96.8 REMARK 620 5 HEC D 201 ND 93.2 97.2 178.1 83.7 REMARK 620 6 HIS D 102 NE2 172.7 95.3 93.8 85.5 88.0 REMARK 620 N 1 2 3 4 5 DBREF 7RWV A 1 106 UNP P0ABE7 C562_ECOLX 23 128 DBREF 7RWV B 1 106 UNP P0ABE7 C562_ECOLX 23 128 DBREF 7RWV C 1 106 UNP P0ABE7 C562_ECOLX 23 128 DBREF 7RWV D 1 106 UNP P0ABE7 C562_ECOLX 23 128 SEQADV 7RWV ALA A 34 UNP P0ABE7 ARG 56 ENGINEERED MUTATION SEQADV 7RWV ALA A 38 UNP P0ABE7 LEU 60 ENGINEERED MUTATION SEQADV 7RWV TRP A 41 UNP P0ABE7 GLN 63 ENGINEERED MUTATION SEQADV 7RWV SER A 42 UNP P0ABE7 LYS 64 ENGINEERED MUTATION SEQADV 7RWV HIS A 59 UNP P0ABE7 LYS 81 ENGINEERED MUTATION SEQADV 7RWV TRP A 66 UNP P0ABE7 ASP 88 ENGINEERED MUTATION SEQADV 7RWV ILE A 69 UNP P0ABE7 VAL 91 ENGINEERED MUTATION SEQADV 7RWV HIS A 73 UNP P0ABE7 ASP 95 ENGINEERED MUTATION SEQADV 7RWV ALA A 74 UNP P0ABE7 ASP 96 ENGINEERED MUTATION SEQADV 7RWV HIS A 77 UNP P0ABE7 LYS 99 ENGINEERED MUTATION SEQADV 7RWV CYS A 96 UNP P0ABE7 THR 118 ENGINEERED MUTATION SEQADV 7RWV CYS A 98 UNP P0ABE7 ARG 120 ENGINEERED MUTATION SEQADV 7RWV CYS A 101 UNP P0ABE7 TYR 123 ENGINEERED MUTATION SEQADV 7RWV ALA B 34 UNP P0ABE7 ARG 56 ENGINEERED MUTATION SEQADV 7RWV ALA B 38 UNP P0ABE7 LEU 60 ENGINEERED MUTATION SEQADV 7RWV TRP B 41 UNP P0ABE7 GLN 63 ENGINEERED MUTATION SEQADV 7RWV SER B 42 UNP P0ABE7 LYS 64 ENGINEERED MUTATION SEQADV 7RWV HIS B 59 UNP P0ABE7 LYS 81 ENGINEERED MUTATION SEQADV 7RWV TRP B 66 UNP P0ABE7 ASP 88 ENGINEERED MUTATION SEQADV 7RWV ILE B 69 UNP P0ABE7 VAL 91 ENGINEERED MUTATION SEQADV 7RWV HIS B 73 UNP P0ABE7 ASP 95 ENGINEERED MUTATION SEQADV 7RWV ALA B 74 UNP P0ABE7 ASP 96 ENGINEERED MUTATION SEQADV 7RWV HIS B 77 UNP P0ABE7 LYS 99 ENGINEERED MUTATION SEQADV 7RWV CYS B 96 UNP P0ABE7 THR 118 ENGINEERED MUTATION SEQADV 7RWV CYS B 98 UNP P0ABE7 ARG 120 ENGINEERED MUTATION SEQADV 7RWV CYS B 101 UNP P0ABE7 TYR 123 ENGINEERED MUTATION SEQADV 7RWV ALA C 34 UNP P0ABE7 ARG 56 ENGINEERED MUTATION SEQADV 7RWV ALA C 38 UNP P0ABE7 LEU 60 ENGINEERED MUTATION SEQADV 7RWV TRP C 41 UNP P0ABE7 GLN 63 ENGINEERED MUTATION SEQADV 7RWV SER C 42 UNP P0ABE7 LYS 64 ENGINEERED MUTATION SEQADV 7RWV HIS C 59 UNP P0ABE7 LYS 81 ENGINEERED MUTATION SEQADV 7RWV TRP C 66 UNP P0ABE7 ASP 88 ENGINEERED MUTATION SEQADV 7RWV ILE C 69 UNP P0ABE7 VAL 91 ENGINEERED MUTATION SEQADV 7RWV HIS C 73 UNP P0ABE7 ASP 95 ENGINEERED MUTATION SEQADV 7RWV ALA C 74 UNP P0ABE7 ASP 96 ENGINEERED MUTATION SEQADV 7RWV HIS C 77 UNP P0ABE7 LYS 99 ENGINEERED MUTATION SEQADV 7RWV CYS C 96 UNP P0ABE7 THR 118 ENGINEERED MUTATION SEQADV 7RWV CYS C 98 UNP P0ABE7 ARG 120 ENGINEERED MUTATION SEQADV 7RWV CYS C 101 UNP P0ABE7 TYR 123 ENGINEERED MUTATION SEQADV 7RWV ALA D 34 UNP P0ABE7 ARG 56 ENGINEERED MUTATION SEQADV 7RWV ALA D 38 UNP P0ABE7 LEU 60 ENGINEERED MUTATION SEQADV 7RWV TRP D 41 UNP P0ABE7 GLN 63 ENGINEERED MUTATION SEQADV 7RWV SER D 42 UNP P0ABE7 LYS 64 ENGINEERED MUTATION SEQADV 7RWV HIS D 59 UNP P0ABE7 LYS 81 ENGINEERED MUTATION SEQADV 7RWV TRP D 66 UNP P0ABE7 ASP 88 ENGINEERED MUTATION SEQADV 7RWV ILE D 69 UNP P0ABE7 VAL 91 ENGINEERED MUTATION SEQADV 7RWV HIS D 73 UNP P0ABE7 ASP 95 ENGINEERED MUTATION SEQADV 7RWV ALA D 74 UNP P0ABE7 ASP 96 ENGINEERED MUTATION SEQADV 7RWV HIS D 77 UNP P0ABE7 LYS 99 ENGINEERED MUTATION SEQADV 7RWV CYS D 96 UNP P0ABE7 THR 118 ENGINEERED MUTATION SEQADV 7RWV CYS D 98 UNP P0ABE7 ARG 120 ENGINEERED MUTATION SEQADV 7RWV CYS D 101 UNP P0ABE7 TYR 123 ENGINEERED MUTATION SEQRES 1 A 106 ALA ASP LEU GLU ASP ASN MET GLU THR LEU ASN ASP ASN SEQRES 2 A 106 LEU LYS VAL ILE GLU LYS ALA ASP ASN ALA ALA GLN VAL SEQRES 3 A 106 LYS ASP ALA LEU THR LYS MET ALA ALA ALA ALA ALA ASP SEQRES 4 A 106 ALA TRP SER ALA THR PRO PRO LYS LEU GLU ASP LYS SER SEQRES 5 A 106 PRO ASP SER PRO GLU MET HIS ASP PHE ARG HIS GLY PHE SEQRES 6 A 106 TRP ILE LEU ILE GLY GLN ILE HIS ALA ALA LEU HIS LEU SEQRES 7 A 106 ALA ASN GLU GLY LYS VAL LYS GLU ALA GLN ALA ALA ALA SEQRES 8 A 106 GLU GLN LEU LYS CYS THR CYS ASN ALA CYS HIS GLN LYS SEQRES 9 A 106 TYR ARG SEQRES 1 B 106 ALA ASP LEU GLU ASP ASN MET GLU THR LEU ASN ASP ASN SEQRES 2 B 106 LEU LYS VAL ILE GLU LYS ALA ASP ASN ALA ALA GLN VAL SEQRES 3 B 106 LYS ASP ALA LEU THR LYS MET ALA ALA ALA ALA ALA ASP SEQRES 4 B 106 ALA TRP SER ALA THR PRO PRO LYS LEU GLU ASP LYS SER SEQRES 5 B 106 PRO ASP SER PRO GLU MET HIS ASP PHE ARG HIS GLY PHE SEQRES 6 B 106 TRP ILE LEU ILE GLY GLN ILE HIS ALA ALA LEU HIS LEU SEQRES 7 B 106 ALA ASN GLU GLY LYS VAL LYS GLU ALA GLN ALA ALA ALA SEQRES 8 B 106 GLU GLN LEU LYS CYS THR CYS ASN ALA CYS HIS GLN LYS SEQRES 9 B 106 TYR ARG SEQRES 1 C 106 ALA ASP LEU GLU ASP ASN MET GLU THR LEU ASN ASP ASN SEQRES 2 C 106 LEU LYS VAL ILE GLU LYS ALA ASP ASN ALA ALA GLN VAL SEQRES 3 C 106 LYS ASP ALA LEU THR LYS MET ALA ALA ALA ALA ALA ASP SEQRES 4 C 106 ALA TRP SER ALA THR PRO PRO LYS LEU GLU ASP LYS SER SEQRES 5 C 106 PRO ASP SER PRO GLU MET HIS ASP PHE ARG HIS GLY PHE SEQRES 6 C 106 TRP ILE LEU ILE GLY GLN ILE HIS ALA ALA LEU HIS LEU SEQRES 7 C 106 ALA ASN GLU GLY LYS VAL LYS GLU ALA GLN ALA ALA ALA SEQRES 8 C 106 GLU GLN LEU LYS CYS THR CYS ASN ALA CYS HIS GLN LYS SEQRES 9 C 106 TYR ARG SEQRES 1 D 106 ALA ASP LEU GLU ASP ASN MET GLU THR LEU ASN ASP ASN SEQRES 2 D 106 LEU LYS VAL ILE GLU LYS ALA ASP ASN ALA ALA GLN VAL SEQRES 3 D 106 LYS ASP ALA LEU THR LYS MET ALA ALA ALA ALA ALA ASP SEQRES 4 D 106 ALA TRP SER ALA THR PRO PRO LYS LEU GLU ASP LYS SER SEQRES 5 D 106 PRO ASP SER PRO GLU MET HIS ASP PHE ARG HIS GLY PHE SEQRES 6 D 106 TRP ILE LEU ILE GLY GLN ILE HIS ALA ALA LEU HIS LEU SEQRES 7 D 106 ALA ASN GLU GLY LYS VAL LYS GLU ALA GLN ALA ALA ALA SEQRES 8 D 106 GLU GLN LEU LYS CYS THR CYS ASN ALA CYS HIS GLN LYS SEQRES 9 D 106 TYR ARG HET HEC A 201 43 HET HEC B 201 43 HET HEC C 201 43 HET HEC D 201 43 HETNAM HEC HEME C FORMUL 5 HEC 4(C34 H34 FE N4 O4) FORMUL 9 HOH *192(H2 O) HELIX 1 AA1 ASP A 2 LYS A 19 1 18 HELIX 2 AA2 ASN A 22 TRP A 41 1 20 HELIX 3 AA3 PRO A 45 GLU A 49 5 5 HELIX 4 AA4 SER A 55 GLU A 81 1 27 HELIX 5 AA5 LYS A 83 LEU A 94 1 12 HELIX 6 AA6 LEU A 94 ARG A 106 1 13 HELIX 7 AA7 ASP B 2 LYS B 19 1 18 HELIX 8 AA8 ASN B 22 ALA B 40 1 19 HELIX 9 AA9 TRP B 41 ALA B 43 5 3 HELIX 10 AB1 PRO B 45 GLU B 49 5 5 HELIX 11 AB2 SER B 55 GLU B 81 1 27 HELIX 12 AB3 LYS B 83 GLN B 93 1 11 HELIX 13 AB4 LEU B 94 ARG B 106 1 13 HELIX 14 AB5 ASP C 2 ALA C 20 1 19 HELIX 15 AB6 ASN C 22 ALA C 40 1 19 HELIX 16 AB7 TRP C 41 ALA C 43 5 3 HELIX 17 AB8 PRO C 45 GLU C 49 5 5 HELIX 18 AB9 SER C 55 GLU C 81 1 27 HELIX 19 AC1 LYS C 83 LEU C 94 1 12 HELIX 20 AC2 LEU C 94 ARG C 106 1 13 HELIX 21 AC3 ASP D 2 ALA D 20 1 19 HELIX 22 AC4 ASN D 22 ALA D 40 1 19 HELIX 23 AC5 TRP D 41 ALA D 43 5 3 HELIX 24 AC6 PRO D 45 GLU D 49 5 5 HELIX 25 AC7 SER D 55 GLU D 81 1 27 HELIX 26 AC8 LYS D 83 LEU D 94 1 12 HELIX 27 AC9 LEU D 94 ARG D 106 1 13 SSBOND 1 CYS A 96 CYS B 96 1555 1555 2.02 SSBOND 2 CYS C 96 CYS D 96 1555 1555 2.03 LINK SG CYS B 98 CAB HEC B 201 1555 1555 1.96 LINK SG CYS D 98 CAB HEC D 201 1555 1555 1.71 LINK SD MET A 7 FE HEC A 201 1555 1555 2.53 LINK NE2 HIS A 102 FE HEC A 201 1555 1555 2.22 LINK SD MET B 7 FE HEC B 201 1555 1555 2.39 LINK NE2 HIS B 102 FE HEC B 201 1555 1555 2.19 LINK SD MET C 7 FE HEC C 201 1555 1555 2.49 LINK NE2 HIS C 102 FE HEC C 201 1555 1555 2.23 LINK SD MET D 7 FE HEC D 201 1555 1555 2.54 LINK NE2 HIS D 102 FE HEC D 201 1555 1555 2.22 CRYST1 92.580 92.580 91.260 90.00 90.00 90.00 I 4 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010801 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010801 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010958 0.00000