HEADER RNA BINDING PROTEIN 28-AUG-21 7S02 TITLE CRYSTAL STRUCTURE OF FBF-2 IN COMPLEX WITH LST-1 SITE A PEPTIDE AND TITLE 2 FBE RNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: FEM-3 MRNA-BINDING FACTOR 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 164-575; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: FBE RNA; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: LATERAL SIGNALING TARGET; COMPND 12 CHAIN: C; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 3 ORGANISM_TAXID: 6239; SOURCE 4 GENE: FBF-2, F21H12.5; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 10 ORGANISM_TAXID: 6239; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 13 ORGANISM_TAXID: 6239; SOURCE 14 GENE: LST-1, CELE_T22A3.3, T22A3.3; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PUMILIO RNA-BINDING PROTEINS, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.QIU,T.M.T.HALL REVDAT 3 18-OCT-23 7S02 1 REMARK REVDAT 2 26-JAN-22 7S02 1 JRNL REVDAT 1 29-DEC-21 7S02 0 JRNL AUTH C.QIU,R.N.WINE,Z.T.CAMPBELL,T.M.T.HALL JRNL TITL BIPARTITE INTERACTION SITES DIFFERENTIALLY MODULATE JRNL TITL 2 RNA-BINDING AFFINITY OF A PROTEIN COMPLEX ESSENTIAL FOR JRNL TITL 3 GERMLINE STEM CELL SELF-RENEWAL. JRNL REF NUCLEIC ACIDS RES. V. 50 536 2022 JRNL REFN ESSN 1362-4962 JRNL PMID 34908132 JRNL DOI 10.1093/NAR/GKAB1220 REMARK 2 REMARK 2 RESOLUTION. 2.34 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.34 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 23809 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.480 REMARK 3 FREE R VALUE TEST SET COUNT : 2020 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.1200 - 5.6300 0.99 1567 153 0.1487 0.1872 REMARK 3 2 5.6300 - 4.4700 0.99 1547 146 0.1449 0.1858 REMARK 3 3 4.4700 - 3.9100 1.00 1571 142 0.1409 0.1834 REMARK 3 4 3.9100 - 3.5500 1.00 1577 148 0.1643 0.2311 REMARK 3 5 3.5500 - 3.3000 1.00 1558 142 0.1932 0.2477 REMARK 3 6 3.3000 - 3.1000 1.00 1553 148 0.1965 0.2308 REMARK 3 7 3.1000 - 2.9500 0.99 1537 139 0.2181 0.3031 REMARK 3 8 2.9500 - 2.8200 0.99 1551 143 0.2289 0.2524 REMARK 3 9 2.8200 - 2.7100 1.00 1553 147 0.2209 0.2711 REMARK 3 10 2.7100 - 2.6200 1.00 1550 147 0.2260 0.2628 REMARK 3 11 2.6200 - 2.5400 1.00 1545 139 0.2241 0.2661 REMARK 3 12 2.5400 - 2.4600 1.00 1553 141 0.2417 0.2806 REMARK 3 13 2.4600 - 2.4000 1.00 1566 145 0.2408 0.2972 REMARK 3 14 2.4000 - 2.3400 1.00 1561 140 0.2715 0.3041 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.60 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 167 THROUGH 212 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.5078 22.4154 -25.6862 REMARK 3 T TENSOR REMARK 3 T11: 0.5881 T22: 0.7311 REMARK 3 T33: 0.5645 T12: -0.0077 REMARK 3 T13: 0.0158 T23: -0.1534 REMARK 3 L TENSOR REMARK 3 L11: 5.0643 L22: 7.0960 REMARK 3 L33: 2.7800 L12: 1.6550 REMARK 3 L13: 1.1958 L23: 1.5359 REMARK 3 S TENSOR REMARK 3 S11: -0.1076 S12: 1.2135 S13: -0.8393 REMARK 3 S21: -1.2398 S22: 0.4987 S23: -0.8859 REMARK 3 S31: -0.0088 S32: 0.5073 S33: -0.4154 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 213 THROUGH 409 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5452 32.1323 3.4607 REMARK 3 T TENSOR REMARK 3 T11: 0.3002 T22: 0.3630 REMARK 3 T33: 0.3529 T12: 0.0090 REMARK 3 T13: 0.0074 T23: 0.0634 REMARK 3 L TENSOR REMARK 3 L11: 2.3901 L22: 1.3451 REMARK 3 L33: 4.4322 L12: 0.8262 REMARK 3 L13: 2.4087 L23: 1.2581 REMARK 3 S TENSOR REMARK 3 S11: 0.1903 S12: -0.3359 S13: -0.2566 REMARK 3 S21: 0.1557 S22: 0.0934 S23: 0.0575 REMARK 3 S31: 0.1567 S32: -0.4998 S33: -0.2949 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 410 THROUGH 527 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.7794 34.0479 20.3471 REMARK 3 T TENSOR REMARK 3 T11: 0.3331 T22: 0.4595 REMARK 3 T33: 0.3369 T12: 0.0306 REMARK 3 T13: -0.0528 T23: -0.0868 REMARK 3 L TENSOR REMARK 3 L11: 6.3737 L22: 0.9601 REMARK 3 L33: 1.3373 L12: -0.4716 REMARK 3 L13: 0.9342 L23: -0.1854 REMARK 3 S TENSOR REMARK 3 S11: 0.2609 S12: -0.6361 S13: 0.2025 REMARK 3 S21: 0.0304 S22: -0.1283 S23: -0.0429 REMARK 3 S31: 0.0455 S32: -0.0011 S33: -0.1391 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 528 THROUGH 569 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.1267 35.5923 15.2480 REMARK 3 T TENSOR REMARK 3 T11: 0.3653 T22: 0.4723 REMARK 3 T33: 0.3754 T12: 0.0180 REMARK 3 T13: -0.0075 T23: 0.0282 REMARK 3 L TENSOR REMARK 3 L11: 4.6969 L22: 7.4645 REMARK 3 L33: 3.0908 L12: -3.0127 REMARK 3 L13: -0.1106 L23: 2.3578 REMARK 3 S TENSOR REMARK 3 S11: 0.3418 S12: 0.2157 S13: 0.3772 REMARK 3 S21: -0.4541 S22: -0.2336 S23: -0.4852 REMARK 3 S31: -0.1889 S32: 0.1763 S33: -0.0896 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.2452 25.0524 1.2960 REMARK 3 T TENSOR REMARK 3 T11: 0.5799 T22: 0.7402 REMARK 3 T33: 0.6993 T12: 0.1216 REMARK 3 T13: -0.2393 T23: -0.1810 REMARK 3 L TENSOR REMARK 3 L11: 2.7737 L22: 0.7919 REMARK 3 L33: 1.6953 L12: -1.0779 REMARK 3 L13: 2.3468 L23: -0.8057 REMARK 3 S TENSOR REMARK 3 S11: -0.1809 S12: 0.7722 S13: -0.1835 REMARK 3 S21: 0.2571 S22: 0.1171 S23: -0.1207 REMARK 3 S31: 0.0773 S32: -0.0474 S33: 0.0806 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 31 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): 40.7084 24.9174 31.7895 REMARK 3 T TENSOR REMARK 3 T11: 0.7184 T22: 0.7082 REMARK 3 T33: 0.5558 T12: -0.0474 REMARK 3 T13: 0.0188 T23: 0.0626 REMARK 3 L TENSOR REMARK 3 L11: 5.0257 L22: 9.0743 REMARK 3 L33: 8.5202 L12: 4.7543 REMARK 3 L13: 5.5610 L23: 7.1849 REMARK 3 S TENSOR REMARK 3 S11: 0.2635 S12: -1.2742 S13: -0.7033 REMARK 3 S21: 0.3319 S22: -0.1639 S23: -0.2436 REMARK 3 S31: -0.5907 S32: -0.8267 S33: -0.1911 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7S02 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-AUG-21. REMARK 100 THE DEPOSITION ID IS D_1000259336. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23853 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.340 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.34 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.76700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3K5Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% (V/V) PEG 400, 0.1 M TRIS, PH 8.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.74067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 75.48133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 56.61100 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 94.35167 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 18.87033 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -7.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 163 REMARK 465 SER A 164 REMARK 465 ASN A 165 REMARK 465 ASN A 166 REMARK 465 ASN A 176 REMARK 465 GLY A 177 REMARK 465 GLU A 178 REMARK 465 GLY A 523 REMARK 465 GLY A 524 REMARK 465 HIS A 569 REMARK 465 PRO A 570 REMARK 465 ILE A 571 REMARK 465 TYR A 572 REMARK 465 GLU A 573 REMARK 465 LEU A 574 REMARK 465 GLN A 575 REMARK 465 GLY C 15 REMARK 465 SER C 16 REMARK 465 ASN C 17 REMARK 465 SER C 18 REMARK 465 SER C 19 REMARK 465 THR C 20 REMARK 465 ILE C 21 REMARK 465 ALA C 22 REMARK 465 TYR C 23 REMARK 465 SER C 24 REMARK 465 LYS C 25 REMARK 465 SER C 26 REMARK 465 GLN C 27 REMARK 465 HIS C 28 REMARK 465 GLU C 29 REMARK 465 ALA C 30 REMARK 465 LYS C 42 REMARK 465 PRO C 43 REMARK 465 LEU C 44 REMARK 465 ILE C 45 REMARK 465 PRO C 46 REMARK 465 LEU C 47 REMARK 465 ASN C 48 REMARK 465 GLN C 49 REMARK 465 PRO C 50 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 A B 9 C5' C4' O4' C3' O3' C2' O2' REMARK 470 A B 9 C1' N9 C8 N7 C5 C6 N6 REMARK 470 A B 9 N1 C2 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 258 56.60 -90.50 REMARK 500 ASP A 312 -147.05 -104.13 REMARK 500 ASP A 376 -165.66 -102.00 REMARK 500 ASN A 442 17.88 -142.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 809 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH C 303 DISTANCE = 5.96 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7RZZ RELATED DB: PDB REMARK 900 DIFFERENT RNA DBREF 7S02 A 164 575 UNP Q09312 FBF2_CAEEL 164 575 DBREF 7S02 B 1 9 PDB 7S02 7S02 1 9 DBREF 7S02 C 18 50 UNP P91820 P91820_CAEEL 18 50 SEQADV 7S02 GLY A 163 UNP Q09312 EXPRESSION TAG SEQADV 7S02 GLY C 15 UNP P91820 EXPRESSION TAG SEQADV 7S02 SER C 16 UNP P91820 EXPRESSION TAG SEQADV 7S02 ASN C 17 UNP P91820 EXPRESSION TAG SEQRES 1 A 413 GLY SER ASN ASN VAL LEU PRO THR TRP SER LEU ASP SER SEQRES 2 A 413 ASN GLY GLU MET ARG SER ARG LEU SER LEU SER GLU VAL SEQRES 3 A 413 LEU ASP SER GLY ASP LEU MET LYS PHE ALA VAL ASP LYS SEQRES 4 A 413 THR GLY CYS GLN PHE LEU GLU LYS ALA VAL LYS GLY SER SEQRES 5 A 413 LEU THR SER TYR GLN LYS PHE GLN LEU PHE GLU GLN VAL SEQRES 6 A 413 ILE GLY ARG LYS ASP ASP PHE LEU LYS LEU SER THR ASN SEQRES 7 A 413 ILE PHE GLY ASN TYR LEU VAL GLN SER VAL ILE GLY ILE SEQRES 8 A 413 SER LEU ALA THR ASN ASP ASP GLY TYR THR LYS ARG GLN SEQRES 9 A 413 GLU LYS LEU LYS ASN PHE ILE SER SER GLN MET THR ASP SEQRES 10 A 413 MET CYS LEU ASP LYS PHE ALA CYS ARG VAL ILE GLN SER SEQRES 11 A 413 SER LEU GLN ASN MET ASP LEU SER LEU ALA CYS LYS LEU SEQRES 12 A 413 VAL GLN ALA LEU PRO ARG ASP ALA ARG LEU ILE ALA ILE SEQRES 13 A 413 CYS VAL ASP GLN ASN ALA ASN HIS VAL ILE GLN LYS VAL SEQRES 14 A 413 VAL ALA VAL ILE PRO LEU LYS ASN TRP GLU PHE ILE VAL SEQRES 15 A 413 ASP PHE VAL ALA THR PRO GLU HIS LEU ARG GLN ILE CYS SEQRES 16 A 413 SER ASP LYS TYR GLY CYS ARG VAL VAL GLN THR ILE ILE SEQRES 17 A 413 GLU LYS LEU THR ALA ASP SER MET ASN VAL ASP LEU THR SEQRES 18 A 413 SER ALA ALA GLN ASN LEU ARG GLU ARG ALA LEU GLN ARG SEQRES 19 A 413 LEU MET THR SER VAL THR ASN ARG CYS GLN GLU LEU ALA SEQRES 20 A 413 THR ASN GLU TYR ALA ASN TYR ILE ILE GLN HIS ILE VAL SEQRES 21 A 413 SER ASN ASP ASP LEU ALA VAL TYR ARG GLU CYS ILE ILE SEQRES 22 A 413 GLU LYS CYS LEU MET ARG ASN LEU LEU SER LEU SER GLN SEQRES 23 A 413 GLU LYS PHE ALA SER HIS VAL VAL GLU LYS ALA PHE LEU SEQRES 24 A 413 HIS ALA PRO LEU GLU LEU LEU ALA GLU MET MET ASP GLU SEQRES 25 A 413 ILE PHE ASP GLY TYR ILE PRO HIS PRO ASP THR GLY LYS SEQRES 26 A 413 ASP ALA LEU ASP ILE MET MET PHE HIS GLN PHE GLY ASN SEQRES 27 A 413 TYR VAL VAL GLN CYS MET LEU THR ILE CYS CYS ASP ALA SEQRES 28 A 413 VAL SER GLY ARG ARG GLN THR LYS GLU GLY GLY TYR ASP SEQRES 29 A 413 HIS ALA ILE SER PHE GLN ASP TRP LEU LYS LYS LEU HIS SEQRES 30 A 413 SER ARG VAL THR LYS GLU ARG HIS ARG LEU SER ARG PHE SEQRES 31 A 413 SER SER GLY LYS LYS MET ILE GLU THR LEU ALA ASN LEU SEQRES 32 A 413 ARG SER THR HIS PRO ILE TYR GLU LEU GLN SEQRES 1 B 9 U G U A C U A U A SEQRES 1 C 36 GLY SER ASN SER SER THR ILE ALA TYR SER LYS SER GLN SEQRES 2 C 36 HIS GLU ALA PRO LYS GLN LEU LEU GLN LEU ARG SER GLU SEQRES 3 C 36 ILE LYS PRO LEU ILE PRO LEU ASN GLN PRO HET PEG A 601 7 HET EDO C 200 4 HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 4 PEG C4 H10 O3 FORMUL 5 EDO C2 H6 O2 FORMUL 6 HOH *125(H2 O) HELIX 1 AA1 SER A 184 GLY A 192 1 9 HELIX 2 AA2 ASP A 193 ASP A 200 1 8 HELIX 3 AA3 ASP A 200 VAL A 211 1 12 HELIX 4 AA4 THR A 216 VAL A 227 1 12 HELIX 5 AA5 ARG A 230 THR A 239 1 10 HELIX 6 AA6 PHE A 242 ALA A 256 1 15 HELIX 7 AA7 GLY A 261 SER A 275 1 15 HELIX 8 AA8 GLN A 276 LEU A 282 1 7 HELIX 9 AA9 PHE A 285 MET A 297 1 13 HELIX 10 AB1 ASP A 298 ALA A 308 1 11 HELIX 11 AB2 ASP A 312 VAL A 320 1 9 HELIX 12 AB3 ALA A 324 ILE A 335 1 12 HELIX 13 AB4 PRO A 336 THR A 349 1 14 HELIX 14 AB5 THR A 349 SER A 358 1 10 HELIX 15 AB6 ASP A 359 LEU A 373 1 15 HELIX 16 AB7 ASP A 376 VAL A 380 5 5 HELIX 17 AB8 THR A 383 ARG A 404 1 22 HELIX 18 AB9 ARG A 404 THR A 410 1 7 HELIX 19 AC1 ALA A 414 ASN A 424 1 11 HELIX 20 AC2 ASP A 425 LEU A 427 5 3 HELIX 21 AC3 ALA A 428 LEU A 439 1 12 HELIX 22 AC4 ASN A 442 GLN A 448 1 7 HELIX 23 AC5 PHE A 451 ALA A 463 1 13 HELIX 24 AC6 PRO A 464 GLY A 478 1 15 HELIX 25 AC7 ASP A 488 PHE A 495 1 8 HELIX 26 AC8 PHE A 498 SER A 515 1 18 HELIX 27 AC9 HIS A 527 GLU A 545 1 19 HELIX 28 AD1 GLU A 545 SER A 550 1 6 HELIX 29 AD2 PHE A 552 THR A 568 1 17 CRYST1 93.813 93.813 113.222 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010660 0.006154 0.000000 0.00000 SCALE2 0.000000 0.012309 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008832 0.00000