HEADER IMMUNE SYSTEM 02-SEP-21 7S1B TITLE CRYSTAL STRUCTURE OF EPSTEIN-BARR VIRUS GLYCOPROTEINS GH/GL/GP42- TITLE 2 PEPTIDE IN COMPLEX WITH HUMAN NEUTRALIZING ANTIBODIES 769C2 AND 770F7 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENVELOPE GLYCOPROTEIN H; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GH; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ENVELOPE GLYCOPROTEIN L; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: GL; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: 770F7 FAB HEAVY CHAIN; COMPND 13 CHAIN: H; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: 770F7 FAB LIGHT CHAIN; COMPND 17 CHAIN: L; COMPND 18 ENGINEERED: YES; COMPND 19 MOL_ID: 5; COMPND 20 MOLECULE: 769C2 FAB HEAVY CHAIN; COMPND 21 CHAIN: X; COMPND 22 ENGINEERED: YES; COMPND 23 MOL_ID: 6; COMPND 24 MOLECULE: 769C2 FAB LIGHT CHAIN; COMPND 25 CHAIN: Y; COMPND 26 ENGINEERED: YES; COMPND 27 MOL_ID: 7; COMPND 28 MOLECULE: SOLUBLE GP42; COMPND 29 CHAIN: C; COMPND 30 FRAGMENT: RESIDUES 47-79; COMPND 31 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN GAMMAHERPESVIRUS 4; SOURCE 3 ORGANISM_COMMON: EPSTEIN-BARR VIRUS; SOURCE 4 ORGANISM_TAXID: 10376; SOURCE 5 GENE: GH, BXLF2; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HUMAN GAMMAHERPESVIRUS 4; SOURCE 10 ORGANISM_COMMON: EPSTEIN-BARR VIRUS; SOURCE 11 ORGANISM_TAXID: 10376; SOURCE 12 GENE: GL, BKRF2; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 20 MOL_ID: 4; SOURCE 21 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 22 ORGANISM_TAXID: 9606; SOURCE 23 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 25 MOL_ID: 5; SOURCE 26 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 27 ORGANISM_TAXID: 9606; SOURCE 28 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 29 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 30 MOL_ID: 6; SOURCE 31 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 32 ORGANISM_TAXID: 9606; SOURCE 33 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 34 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 35 MOL_ID: 7; SOURCE 36 ORGANISM_SCIENTIFIC: HUMAN GAMMAHERPESVIRUS 4; SOURCE 37 ORGANISM_COMMON: EPSTEIN-BARR VIRUS; SOURCE 38 ORGANISM_TAXID: 10376; SOURCE 39 GENE: BZLF2; SOURCE 40 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 41 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS ANTIBODY, FAB, IMMUNE SYSTEM, GH/GL, EPSTEIN-BARR VIRUS, HERPESVIRUS EXPDTA X-RAY DIFFRACTION AUTHOR W.-H.CHEN,J.I.COHEN,M.KANEKIYO,M.G.JOYCE REVDAT 3 18-OCT-23 7S1B 1 REMARK REVDAT 2 16-NOV-22 7S1B 1 JRNL REVDAT 1 09-NOV-22 7S1B 0 JRNL AUTH W.H.CHEN,J.KIM,W.BU,N.L.BOARD,Y.TSYBOVSKY,Y.WANG,A.HOSTAL, JRNL AUTH 2 S.F.ANDREWS,R.A.GILLESPIE,M.CHOE,T.STEPHENS,E.S.YANG,A.PEGU, JRNL AUTH 3 C.E.PETERSON,B.E.FISHER,J.R.MASCOLA,S.PITTALUGA, JRNL AUTH 4 A.B.MCDERMOTT,M.KANEKIYO,M.G.JOYCE,J.I.COHEN JRNL TITL EPSTEIN-BARR VIRUS GH/GL HAS MULTIPLE SITES OF VULNERABILITY JRNL TITL 2 FOR VIRUS NEUTRALIZATION AND FUSION INHIBITION. JRNL REF IMMUNITY V. 55 2135 2022 JRNL REFN ISSN 1074-7613 JRNL PMID 36306784 JRNL DOI 10.1016/J.IMMUNI.2022.10.003 REMARK 2 REMARK 2 RESOLUTION. 3.03 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.03 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 71.32 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.040 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.7 REMARK 3 NUMBER OF REFLECTIONS : 36541 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.244 REMARK 3 R VALUE (WORKING SET) : 0.241 REMARK 3 FREE R VALUE : 0.288 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.490 REMARK 3 FREE R VALUE TEST SET COUNT : 2005 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 71.3200 - 7.3100 0.99 2789 158 0.2170 0.2528 REMARK 3 2 7.3100 - 5.8000 0.99 2758 163 0.2461 0.2714 REMARK 3 3 5.8000 - 5.0700 0.99 2728 155 0.2091 0.2509 REMARK 3 4 5.0700 - 4.6000 0.98 2708 153 0.1875 0.2353 REMARK 3 5 4.6000 - 4.2700 0.98 2674 155 0.1867 0.2261 REMARK 3 6 4.2700 - 4.0200 0.96 2648 154 0.2048 0.2541 REMARK 3 7 4.0200 - 3.8200 0.95 2604 144 0.2273 0.2984 REMARK 3 8 3.8200 - 3.6500 0.93 2516 149 0.2469 0.3123 REMARK 3 9 3.6500 - 3.5100 0.91 2505 155 0.2631 0.2934 REMARK 3 10 3.5100 - 3.3900 0.86 2368 139 0.2659 0.3254 REMARK 3 11 3.3900 - 3.2900 0.83 2245 150 0.2975 0.3522 REMARK 3 12 3.2900 - 3.1900 0.81 2207 115 0.3116 0.3573 REMARK 3 13 3.1900 - 3.1100 0.76 2076 125 0.3477 0.4305 REMARK 3 14 3.1100 - 3.0300 0.62 1710 90 0.3674 0.3765 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.470 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.02 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 18:674 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.465 4.183 -1.791 REMARK 3 T TENSOR REMARK 3 T11: 0.1139 T22: 0.0995 REMARK 3 T33: 0.0295 T12: -0.0148 REMARK 3 T13: -0.0302 T23: 0.0369 REMARK 3 L TENSOR REMARK 3 L11: 1.2751 L22: 0.9270 REMARK 3 L33: 0.4173 L12: 0.2736 REMARK 3 L13: -0.3380 L23: -0.4560 REMARK 3 S TENSOR REMARK 3 S11: 0.1285 S12: -0.0207 S13: -0.1544 REMARK 3 S21: 0.0134 S22: -0.1149 S23: -0.0534 REMARK 3 S31: -0.0628 S32: 0.0089 S33: 0.0069 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN B AND RESID 26:124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -48.683 -10.382 11.967 REMARK 3 T TENSOR REMARK 3 T11: -0.1241 T22: 0.3746 REMARK 3 T33: 0.8253 T12: 0.0049 REMARK 3 T13: -0.0805 T23: 0.2132 REMARK 3 L TENSOR REMARK 3 L11: 1.4414 L22: 0.9273 REMARK 3 L33: 0.9963 L12: -0.2708 REMARK 3 L13: 0.4195 L23: -0.2537 REMARK 3 S TENSOR REMARK 3 S11: -0.0453 S12: -0.0789 S13: -0.2797 REMARK 3 S21: -0.1029 S22: 0.0121 S23: 0.3610 REMARK 3 S31: 0.3802 S32: -0.0602 S33: -0.0044 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN H AND RESID 1:226 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.861 26.278 -49.402 REMARK 3 T TENSOR REMARK 3 T11: 0.5554 T22: 0.1694 REMARK 3 T33: -0.4803 T12: 0.1126 REMARK 3 T13: -0.0244 T23: -0.0119 REMARK 3 L TENSOR REMARK 3 L11: 0.1397 L22: 0.5332 REMARK 3 L33: 0.7799 L12: -0.1063 REMARK 3 L13: 0.1013 L23: -0.3111 REMARK 3 S TENSOR REMARK 3 S11: 0.0787 S12: 0.0951 S13: -0.0936 REMARK 3 S21: -0.4821 S22: -0.2156 S23: -0.0636 REMARK 3 S31: 0.1140 S32: -0.0169 S33: 0.0024 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN L AND RESID 1:215 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.665 45.180 -47.531 REMARK 3 T TENSOR REMARK 3 T11: 0.5228 T22: 0.0943 REMARK 3 T33: -0.0008 T12: 0.0231 REMARK 3 T13: -0.0785 T23: 0.0576 REMARK 3 L TENSOR REMARK 3 L11: 0.2846 L22: 0.5670 REMARK 3 L33: 0.9759 L12: -0.2313 REMARK 3 L13: 0.0825 L23: -0.4003 REMARK 3 S TENSOR REMARK 3 S11: -0.1205 S12: -0.0147 S13: 0.1278 REMARK 3 S21: -0.0498 S22: -0.1564 S23: -0.0592 REMARK 3 S31: -0.1447 S32: 0.1238 S33: 0.1133 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN X AND RESID 9:210 ) REMARK 3 ORIGIN FOR THE GROUP (A): -53.345 -26.430 50.282 REMARK 3 T TENSOR REMARK 3 T11: 0.5941 T22: 0.9526 REMARK 3 T33: 0.8755 T12: -0.0934 REMARK 3 T13: -0.0580 T23: 0.3469 REMARK 3 L TENSOR REMARK 3 L11: 0.0645 L22: 0.0136 REMARK 3 L33: 0.4465 L12: -0.0388 REMARK 3 L13: -0.2008 L23: 0.0825 REMARK 3 S TENSOR REMARK 3 S11: -0.1141 S12: -0.0852 S13: -0.0569 REMARK 3 S21: -0.0454 S22: 0.0447 S23: 0.0198 REMARK 3 S31: 0.2056 S32: -0.0083 S33: 0.0872 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN Y AND RESID 2:213 ) REMARK 3 ORIGIN FOR THE GROUP (A): -67.003 -13.540 57.896 REMARK 3 T TENSOR REMARK 3 T11: 0.6475 T22: 1.0985 REMARK 3 T33: 0.9170 T12: -0.0832 REMARK 3 T13: 0.1228 T23: 0.3098 REMARK 3 L TENSOR REMARK 3 L11: 0.0469 L22: 0.0845 REMARK 3 L33: 0.0042 L12: -0.0001 REMARK 3 L13: -0.0285 L23: -0.0025 REMARK 3 S TENSOR REMARK 3 S11: -0.0079 S12: -0.3373 S13: 0.0279 REMARK 3 S21: 0.2281 S22: 0.0069 S23: -0.0287 REMARK 3 S31: -0.0885 S32: 0.0255 S33: -0.0453 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN C AND RESID 47:79 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.666 22.785 3.552 REMARK 3 T TENSOR REMARK 3 T11: 0.1768 T22: 0.1695 REMARK 3 T33: 0.3572 T12: 0.0886 REMARK 3 T13: 0.1589 T23: 0.0599 REMARK 3 L TENSOR REMARK 3 L11: 1.4839 L22: 0.4980 REMARK 3 L33: 0.2280 L12: 0.5923 REMARK 3 L13: -0.1103 L23: 0.1586 REMARK 3 S TENSOR REMARK 3 S11: 0.0071 S12: -0.2415 S13: 0.1856 REMARK 3 S21: 0.1427 S22: -0.0947 S23: 0.2134 REMARK 3 S31: -0.0110 S32: -0.1596 S33: 0.0074 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7S1B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-SEP-21. REMARK 100 THE DEPOSITION ID IS D_1000259335. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40453 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 71.320 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.7 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.10 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5W0K REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES PH7.4, 24% PEG3350, 7.5% REMARK 280 GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 53.85150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEPTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEPTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 70940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -100.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, H, L, X, Y, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TRP B 24 REMARK 465 ALA B 25 REMARK 465 GLY B 125 REMARK 465 ALA B 126 REMARK 465 ASN B 127 REMARK 465 LEU B 128 REMARK 465 ASN B 129 REMARK 465 ARG B 130 REMARK 465 TYR B 131 REMARK 465 ALA B 132 REMARK 465 TRP B 133 REMARK 465 HIS B 134 REMARK 465 ARG B 135 REMARK 465 GLY B 136 REMARK 465 GLY B 137 REMARK 465 ALA H 141 REMARK 465 SER H 142 REMARK 465 THR H 143 REMARK 465 SER H 144 REMARK 465 SER H 227 REMARK 465 CYS H 228 REMARK 465 ASP H 229 REMARK 465 LYS H 230 REMARK 465 GLU X 1 REMARK 465 VAL X 2 REMARK 465 GLN X 3 REMARK 465 LEU X 4 REMARK 465 VAL X 5 REMARK 465 GLU X 6 REMARK 465 SER X 7 REMARK 465 GLY X 8 REMARK 465 THR X 117 REMARK 465 VAL X 118 REMARK 465 SER X 119 REMARK 465 SER X 120 REMARK 465 PHE X 129 REMARK 465 PRO X 130 REMARK 465 LEU X 131 REMARK 465 ALA X 132 REMARK 465 PRO X 133 REMARK 465 SER X 134 REMARK 465 SER X 135 REMARK 465 LYS X 136 REMARK 465 SER X 137 REMARK 465 THR X 138 REMARK 465 SER X 139 REMARK 465 GLY X 140 REMARK 465 GLY X 141 REMARK 465 THR X 142 REMARK 465 LYS X 150 REMARK 465 ASP X 151 REMARK 465 TYR X 152 REMARK 465 PHE X 153 REMARK 465 PRO X 154 REMARK 465 GLU X 155 REMARK 465 PRO X 156 REMARK 465 VAL X 176 REMARK 465 LEU X 177 REMARK 465 GLN X 178 REMARK 465 SER X 179 REMARK 465 SER X 180 REMARK 465 GLY X 181 REMARK 465 LEU X 182 REMARK 465 TYR X 183 REMARK 465 SER X 184 REMARK 465 GLN X 199 REMARK 465 THR X 200 REMARK 465 TYR X 201 REMARK 465 ILE X 202 REMARK 465 ASN X 211 REMARK 465 THR X 212 REMARK 465 LYS X 213 REMARK 465 VAL X 214 REMARK 465 ASP X 215 REMARK 465 LYS X 216 REMARK 465 LYS X 217 REMARK 465 VAL X 218 REMARK 465 GLU X 219 REMARK 465 PRO X 220 REMARK 465 LYS X 221 REMARK 465 SER X 222 REMARK 465 CYS X 223 REMARK 465 ASP X 224 REMARK 465 LYS X 225 REMARK 465 GLN Y 1 REMARK 465 GLU Y 128 REMARK 465 LEU Y 129 REMARK 465 GLN Y 130 REMARK 465 VAL Y 159 REMARK 465 LYS Y 160 REMARK 465 ALA Y 161 REMARK 465 GLU Y 214 REMARK 465 CYS Y 215 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN X 67 CE MET X 83 2.03 REMARK 500 O TYR X 32 NH2 ARG X 72 2.12 REMARK 500 OG SER X 61 O LYS X 65 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 19 70.81 60.03 REMARK 500 THR A 62 31.38 -92.70 REMARK 500 ILE A 112 135.31 -36.50 REMARK 500 THR A 174 -169.56 -125.01 REMARK 500 GLU A 187 -4.81 67.48 REMARK 500 PHE A 410 -2.78 68.50 REMARK 500 LEU A 482 34.73 -99.17 REMARK 500 GLN A 503 -8.99 71.33 REMARK 500 TRP A 527 -3.52 56.84 REMARK 500 LEU A 547 -168.30 -79.62 REMARK 500 SER A 575 70.75 60.27 REMARK 500 SER A 576 158.06 -48.63 REMARK 500 MET A 584 18.54 56.74 REMARK 500 ALA B 36 46.99 -78.40 REMARK 500 GLN B 37 -3.68 -146.66 REMARK 500 CYS B 56 -169.93 -101.04 REMARK 500 ASP B 57 -9.98 -56.86 REMARK 500 PRO B 67 -8.88 -58.97 REMARK 500 ASN B 72 -0.69 63.57 REMARK 500 GLU B 121 -5.66 70.76 REMARK 500 ILE H 48 -61.78 -98.48 REMARK 500 SER H 139 -153.06 -86.84 REMARK 500 ASP H 156 63.79 60.79 REMARK 500 ALA L 52 -9.99 72.81 REMARK 500 ALA L 112 72.58 58.43 REMARK 500 PRO L 142 -174.26 -68.98 REMARK 500 PRO X 14 1.46 -53.73 REMARK 500 VAL X 48 -54.60 -128.55 REMARK 500 SER X 55 67.07 -68.82 REMARK 500 ASP X 62 50.88 -140.70 REMARK 500 SER X 63 -157.30 -152.44 REMARK 500 ASN X 67 -167.38 -168.87 REMARK 500 THR X 69 133.67 -38.20 REMARK 500 ARG X 87 -97.34 50.39 REMARK 500 ALA X 92 -38.23 -131.27 REMARK 500 SER Y 9 67.40 62.14 REMARK 500 SER Y 13 52.65 -92.05 REMARK 500 TYR Y 38 118.12 -161.01 REMARK 500 GLN Y 39 -70.66 -122.90 REMARK 500 GLN Y 40 -37.32 64.74 REMARK 500 HIS Y 41 168.50 168.59 REMARK 500 MET Y 49 -15.11 68.87 REMARK 500 ILE Y 50 105.35 -161.09 REMARK 500 GLU Y 52 -159.27 -139.16 REMARK 500 SER Y 58 45.30 -85.85 REMARK 500 GLN Y 81 50.86 -90.36 REMARK 500 ALA Y 86 -174.83 -172.75 REMARK 500 SER Y 125 64.59 68.12 REMARK 500 ASP Y 155 -19.82 66.17 REMARK 500 SER Y 156 -1.54 -152.45 REMARK 500 REMARK 500 THIS ENTRY HAS 58 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 7S1B A 18 674 UNP P03231 GH_EBVB9 18 674 DBREF 7S1B B 24 137 UNP P03212 GL_EBVB9 24 137 DBREF 7S1B H 1 230 PDB 7S1B 7S1B 1 230 DBREF 7S1B L 1 215 PDB 7S1B 7S1B 1 215 DBREF 7S1B X 1 225 PDB 7S1B 7S1B 1 225 DBREF 7S1B Y 1 215 PDB 7S1B 7S1B 1 215 DBREF 7S1B C 47 79 UNP P0C6Z5 GP42_EBVG 47 79 SEQADV 7S1B ALA B 35 UNP P03212 ARG 35 CONFLICT SEQRES 1 A 657 ALA SER LEU SER GLU VAL LYS LEU HIS LEU ASP ILE GLU SEQRES 2 A 657 GLY HIS ALA SER HIS TYR THR ILE PRO TRP THR GLU LEU SEQRES 3 A 657 MET ALA LYS VAL PRO GLY LEU SER PRO GLU ALA LEU TRP SEQRES 4 A 657 ARG GLU ALA ASN VAL THR GLU ASP LEU ALA SER MET LEU SEQRES 5 A 657 ASN ARG TYR LYS LEU ILE TYR LYS THR SER GLY THR LEU SEQRES 6 A 657 GLY ILE ALA LEU ALA GLU PRO VAL ASP ILE PRO ALA VAL SEQRES 7 A 657 SER GLU GLY SER MET GLN VAL ASP ALA SER LYS VAL HIS SEQRES 8 A 657 PRO GLY VAL ILE SER GLY LEU ASN SER PRO ALA CYS MET SEQRES 9 A 657 LEU SER ALA PRO LEU GLU LYS GLN LEU PHE TYR TYR ILE SEQRES 10 A 657 GLY THR MET LEU PRO ASN THR ARG PRO HIS SER TYR VAL SEQRES 11 A 657 PHE TYR GLN LEU ARG CYS HIP LEU SER TYR VAL ALA LEU SEQRES 12 A 657 SER ILE ASN GLY ASP LYS PHE GLN TYR THR GLY ALA MET SEQRES 13 A 657 THR SER LYS PHE LEU MET GLY THR TYR LYS ARG VAL THR SEQRES 14 A 657 GLU LYS GLY ASP GLU HIS VAL LEU SER LEU VAL PHE GLY SEQRES 15 A 657 LYS THR LYS ASP LEU PRO ASP LEU ARG GLY PRO PHE SER SEQRES 16 A 657 TYR PRO SER LEU THR SER ALA GLN SER GLY ASP TYR SER SEQRES 17 A 657 LEU VAL ILE VAL THR THR PHE VAL HIS TYR ALA ASN PHE SEQRES 18 A 657 HIS ASN TYR PHE VAL PRO ASN LEU LYS ASP MET PHE SER SEQRES 19 A 657 ARG ALA VAL THR MET THR ALA ALA SER TYR ALA ARG TYR SEQRES 20 A 657 VAL LEU GLN LYS LEU VAL LEU LEU GLU MET LYS GLY GLY SEQRES 21 A 657 CYS ARG GLU PRO GLU LEU ASP THR GLU THR LEU THR THR SEQRES 22 A 657 MET PHE GLU VAL SER VAL ALA PHE PHE LYS VAL GLY HIS SEQRES 23 A 657 ALA VAL GLY GLU THR GLY ASN GLY CYS VAL ASP LEU ARG SEQRES 24 A 657 TRP LEU ALA LYS SER PHE PHE GLU LEU THR VAL LEU LYS SEQRES 25 A 657 ASP ILE ILE GLY ILE CYS TYR GLY ALA THR VAL LYS GLY SEQRES 26 A 657 MET GLN SER TYR GLY LEU GLU ARG LEU ALA ALA MET LEU SEQRES 27 A 657 MET ALA THR VAL LYS MET GLU GLU LEU GLY HIS LEU THR SEQRES 28 A 657 THR GLU LYS GLN GLU TYR ALA LEU ARG LEU ALA THR VAL SEQRES 29 A 657 GLY TYR PRO LYS ALA GLY VAL TYR SER GLY LEU ILE GLY SEQRES 30 A 657 GLY ALA THR SER VAL LEU LEU SER ALA TYR ASN ARG HIS SEQRES 31 A 657 PRO LEU PHE GLN PRO LEU HIS THR VAL MET ARG GLU THR SEQRES 32 A 657 LEU PHE ILE GLY SER HIS VAL VAL LEU ARG GLU LEU ARG SEQRES 33 A 657 LEU ASN VAL THR THR GLN GLY PRO ASN LEU ALA LEU TYR SEQRES 34 A 657 GLN LEU LEU SER THR ALA LEU CYS SER ALA LEU GLU ILE SEQRES 35 A 657 GLY GLU VAL LEU ARG GLY LEU ALA LEU GLY THR GLU SER SEQRES 36 A 657 GLY LEU PHE SER PRO CYS TYR LEU SER LEU ARG PHE ASP SEQRES 37 A 657 LEU THR ARG ASP LYS LEU LEU SER MET ALA PRO GLN GLU SEQRES 38 A 657 ALA THR LEU ASP GLN ALA ALA VAL SER ASN ALA VAL ASP SEQRES 39 A 657 GLY PHE LEU GLY ARG LEU SER LEU GLU ARG GLU ASP ARG SEQRES 40 A 657 ASP ALA TRP HIS LEU PRO ALA TYR LYS CYS VAL ASP ARG SEQRES 41 A 657 LEU ASP LYS VAL LEU MET ILE ILE PRO LEU ILE ASN VAL SEQRES 42 A 657 THR PHE ILE ILE SER SER ASP ARG GLU VAL ARG GLY SER SEQRES 43 A 657 ALA LEU TYR GLU ALA SER THR THR TYR LEU SER SER SER SEQRES 44 A 657 LEU PHE LEU SER PRO VAL ILE MET ASN LYS CYS SER GLN SEQRES 45 A 657 GLY ALA VAL ALA GLY GLU PRO ARG GLN ILE PRO LYS ILE SEQRES 46 A 657 GLN ASN PHE THR ARG THR GLN LYS SER CYS ILE PHE CYS SEQRES 47 A 657 GLY PHE ALA LEU LEU SER TYR ASP GLU LYS GLU GLY LEU SEQRES 48 A 657 GLU THR THR THR TYR ILE THR SER GLN GLU VAL GLN ASN SEQRES 49 A 657 SER ILE LEU SER SER ASN TYR PHE ASP PHE ASP ASN LEU SEQRES 50 A 657 HIS VAL HIS TYR LEU LEU LEU THR THR ASN GLY THR VAL SEQRES 51 A 657 MET GLU ILE ALA GLY LEU TYR SEQRES 1 B 114 TRP ALA TYR PRO CYS CYS HIS VAL THR GLN LEU ALA ALA SEQRES 2 B 114 GLN HIS LEU LEU ALA LEU GLU ASN ILE SER ASP ILE TYR SEQRES 3 B 114 LEU VAL SER ASN GLN THR CYS ASP GLY PHE SER LEU ALA SEQRES 4 B 114 SER LEU ASN SER PRO LYS ASN GLY SER ASN GLN LEU VAL SEQRES 5 B 114 ILE SER ARG CYS ALA ASN GLY LEU ASN VAL VAL SER PHE SEQRES 6 B 114 PHE ILE SER ILE LEU LYS ARG SER SER SER ALA LEU THR SEQRES 7 B 114 GLY HIS LEU ARG GLU LEU LEU THR THR LEU GLU THR LEU SEQRES 8 B 114 TYR GLY SER PHE SER VAL GLU ASP LEU PHE GLY ALA ASN SEQRES 9 B 114 LEU ASN ARG TYR ALA TRP HIS ARG GLY GLY SEQRES 1 H 230 GLN VAL GLN PHE GLN GLN TRP GLY ALA GLY LEU LEU LYS SEQRES 2 H 230 PRO SER GLU THR LEU SER LEU THR CYS GLY VAL TYR GLY SEQRES 3 H 230 GLY SER LEU SER GLY TYR TYR TRP SER TRP ILE ARG GLN SEQRES 4 H 230 THR PRO GLY LYS GLY LEU GLU TRP ILE GLY GLU ILE ASN SEQRES 5 H 230 HIS THR GLY THR THR ASN TYR ASN PRO SER LEU LYS SER SEQRES 6 H 230 ARG VAL THR MET SER VAL ASP THR SER LYS ASN GLN PHE SEQRES 7 H 230 SER LEU LYS MET SER SER LEU THR ALA ALA ASP THR ALA SEQRES 8 H 230 LEU TYR TYR CYS ALA ARG GLU GLY ALA PRO ARG TRP ALA SEQRES 9 H 230 LEU LYS ARG PRO SER ASN TRP PHE ASP PRO TRP GLY GLN SEQRES 10 H 230 GLY THR LEU VAL THR VAL SER SER ALA SER THR LYS GLY SEQRES 11 H 230 PRO SER VAL PHE PRO LEU ALA PRO SER SER ALA SER THR SEQRES 12 H 230 SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP SEQRES 13 H 230 TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY SEQRES 14 H 230 ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU SEQRES 15 H 230 GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR SEQRES 16 H 230 VAL PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS SEQRES 17 H 230 ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS SEQRES 18 H 230 LYS VAL GLU PRO LYS SER CYS ASP LYS SEQRES 1 L 215 GLU ILE VAL LEU THR GLN SER PRO VAL SER LEU SER LEU SEQRES 2 L 215 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 L 215 GLN SER LEU SER SER THR TYR LEU ALA TRP TYR GLN GLN SEQRES 4 L 215 ILE PRO GLY GLN ALA PRO ARG LEU LEU ILE TYR GLY ALA SEQRES 5 L 215 SER SER ARG ALA ALA GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 L 215 GLY GLY SER GLY THR ASP PHE THR LEU THR ILE SER ARG SEQRES 7 L 215 LEU GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN SEQRES 8 L 215 TYR GLY SER SER PRO ARG SER PHE GLY GLN GLY THR LYS SEQRES 9 L 215 LEU GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE SEQRES 10 L 215 ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR SEQRES 11 L 215 ALA SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG SEQRES 12 L 215 GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SEQRES 13 L 215 SER GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER SEQRES 14 L 215 LYS ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SEQRES 15 L 215 SER LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS SEQRES 16 L 215 GLU VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SEQRES 17 L 215 SER PHE ASN ARG GLY GLU CYS SEQRES 1 X 225 GLU VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL LYS SEQRES 2 X 225 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 X 225 PHE THR PHE SER THR TYR ALA MET ASP TRP VAL ARG GLN SEQRES 4 X 225 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER LEU ILE SER SEQRES 5 X 225 SER ARG SER SER ASN ILE TYR TYR SER ASP SER VAL LYS SEQRES 6 X 225 GLY ASN PHE THR ILE SER ARG ASP ASN ALA LYS ASN SER SEQRES 7 X 225 LEU PHE LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR SEQRES 8 X 225 ALA VAL TYR TYR CYS ALA ARG GLU ALA GLY GLY PHE HIS SEQRES 9 X 225 SER HIS PHE ASP MET TRP GLY GLN GLY THR LEU VAL THR SEQRES 10 X 225 VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO SEQRES 11 X 225 LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA SEQRES 12 X 225 ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO SEQRES 13 X 225 VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY SEQRES 14 X 225 VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU SEQRES 15 X 225 TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SER SEQRES 16 X 225 LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS SEQRES 17 X 225 PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SEQRES 18 X 225 SER CYS ASP LYS SEQRES 1 Y 215 GLN SER VAL LEU THR GLN PRO ALA SER VAL SER GLY SER SEQRES 2 Y 215 LEU GLY GLN SER VAL THR ILE SER CYS THR GLY THR SER SEQRES 3 Y 215 SER ASP VAL GLY GLY TYR ASP TYR VAL SER TRP TYR GLN SEQRES 4 Y 215 GLN HIS PRO GLY LYS ASN PRO LYS LEU MET ILE PHE GLU SEQRES 5 Y 215 VAL ASN ASN ARG PRO SER GLY VAL SER THR ARG PHE SER SEQRES 6 Y 215 GLY SER LYS SER GLY ASN THR ALA SER LEU THR ILE SER SEQRES 7 Y 215 GLY LEU GLN ALA GLU ASP GLU ALA ASP TYR TYR CYS ASN SEQRES 8 Y 215 SER TYR SER THR THR THR THR TRP VAL PHE GLY GLY GLY SEQRES 9 Y 215 THR SER LEU THR VAL LEU GLY GLN PRO LYS ALA ALA PRO SEQRES 10 Y 215 SER VAL THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN SEQRES 11 Y 215 ALA ASN LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE SEQRES 12 Y 215 TYR PRO GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SEQRES 13 Y 215 SER PRO VAL LYS ALA GLY VAL GLU THR THR THR PRO SER SEQRES 14 Y 215 LYS GLN SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SEQRES 15 Y 215 SER LEU THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SEQRES 16 Y 215 SER CYS GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS SEQRES 17 Y 215 THR VAL ALA PRO THR GLU CYS SEQRES 1 C 33 LYS PRO ASN VAL GLU VAL TRP PRO VAL ASP PRO PRO PRO SEQRES 2 C 33 PRO VAL ASN PHE ASN LYS THR ALA GLU GLN GLU TYR GLY SEQRES 3 C 33 ASP LYS GLU VAL LYS LEU PRO MODRES 7S1B HIP A 154 HIS MODIFIED RESIDUE HET HIP A 154 14 HET NAG A 701 14 HET NAG A 702 14 HET NAG B 201 14 HET NAG B 202 14 HETNAM HIP ND1-PHOSPHONOHISTIDINE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 1 HIP C6 H11 N3 O5 P 1+ FORMUL 8 NAG 4(C8 H15 N O6) HELIX 1 AA1 TRP A 40 LYS A 46 1 7 HELIX 2 AA2 SER A 51 ASN A 60 1 10 HELIX 3 AA3 ASP A 64 ILE A 75 1 12 HELIX 4 AA4 SER A 123 PHE A 131 1 9 HELIX 5 AA5 THR A 141 PHE A 148 1 8 HELIX 6 AA6 TYR A 213 SER A 215 5 3 HELIX 7 AA7 THR A 231 HIS A 239 1 9 HELIX 8 AA8 ASN A 245 MET A 256 1 12 HELIX 9 AA9 THR A 257 MET A 274 1 18 HELIX 10 AB1 ASP A 284 GLU A 307 1 24 HELIX 11 AB2 LEU A 315 TYR A 336 1 22 HELIX 12 AB3 SER A 345 MET A 356 1 12 HELIX 13 AB4 LYS A 360 LEU A 367 5 8 HELIX 14 AB5 THR A 368 TYR A 383 1 16 HELIX 15 AB6 SER A 390 HIS A 407 1 18 HELIX 16 AB7 HIS A 414 ARG A 433 1 20 HELIX 17 AB8 GLN A 439 CYS A 454 1 16 HELIX 18 AB9 SER A 455 GLY A 469 1 15 HELIX 19 AC1 THR A 470 LEU A 474 5 5 HELIX 20 AC2 SER A 476 LEU A 480 5 5 HELIX 21 AC3 THR A 487 ALA A 495 1 9 HELIX 22 AC4 GLN A 503 LEU A 517 1 15 HELIX 23 AC5 ALA A 531 VAL A 535 5 5 HELIX 24 AC6 ARG A 537 ASP A 539 5 3 HELIX 25 AC7 SER A 636 SER A 645 1 10 HELIX 26 AC8 ALA B 41 ILE B 45 5 5 HELIX 27 AC9 GLY B 70 LEU B 74 5 5 HELIX 28 AD1 GLY B 82 ARG B 95 1 14 HELIX 29 AD2 SER B 96 LEU B 100 5 5 HELIX 30 AD3 GLY B 102 PHE B 118 1 17 HELIX 31 AD4 THR H 86 THR H 90 5 5 HELIX 32 AD5 SER H 168 ALA H 170 5 3 HELIX 33 AD6 GLU L 80 PHE L 84 5 5 HELIX 34 AD7 SER L 122 GLY L 129 1 8 HELIX 35 AD8 LYS L 184 LYS L 189 1 6 HELIX 36 AD9 ASN X 74 ASN X 77 5 4 HELIX 37 AE1 LEU X 86 ASP X 90 5 5 HELIX 38 AE2 THR Y 185 LYS Y 190 1 6 HELIX 39 AE3 THR C 66 TYR C 71 1 6 SHEET 1 AA1 5 SER A 34 PRO A 39 0 SHEET 2 AA1 5 GLU A 22 LEU A 27 -1 N LEU A 25 O TYR A 36 SHEET 3 AA1 5 ASP B 47 LEU B 50 1 O ILE B 48 N HIS A 26 SHEET 4 AA1 5 LEU B 61 ASN B 65 -1 O ASN B 65 N ASP B 47 SHEET 5 AA1 5 SER B 77 ASN B 81 -1 O ALA B 80 N ALA B 62 SHEET 1 AA2 8 LEU A 82 GLY A 83 0 SHEET 2 AA2 8 THR A 217 GLN A 220 1 O GLN A 220 N LEU A 82 SHEET 3 AA2 8 TYR A 224 VAL A 229 -1 O LEU A 226 N SER A 218 SHEET 4 AA2 8 HIS A 192 LYS A 200 -1 N VAL A 197 O VAL A 227 SHEET 5 AA2 8 PHE A 177 ARG A 184 -1 N TYR A 182 O LEU A 194 SHEET 6 AA2 8 PHE A 167 THR A 170 -1 N GLN A 168 O LYS A 183 SHEET 7 AA2 8 TYR A 157 ILE A 162 -1 N LEU A 160 O TYR A 169 SHEET 8 AA2 8 THR A 339 LYS A 341 -1 O THR A 339 N ALA A 159 SHEET 1 AA3 3 MET A 100 VAL A 102 0 SHEET 2 AA3 3 ALA A 119 LEU A 122 1 O LEU A 122 N VAL A 102 SHEET 3 AA3 3 CYS A 312 ASP A 314 -1 O VAL A 313 N MET A 121 SHEET 1 AA4 2 ILE A 134 LEU A 138 0 SHEET 2 AA4 2 LEU A 151 HIP A 154 -1 O CYS A 153 N GLY A 135 SHEET 1 AA5 5 VAL A 541 PRO A 546 0 SHEET 2 AA5 5 VAL A 550 SER A 555 -1 O ILE A 554 N MET A 543 SHEET 3 AA5 5 PHE A 578 ILE A 583 -1 O SER A 580 N ILE A 553 SHEET 4 AA5 5 TYR A 566 GLU A 567 -1 N TYR A 566 O LEU A 579 SHEET 5 AA5 5 ARG A 597 GLN A 598 1 O ARG A 597 N GLU A 567 SHEET 1 AA6 5 LYS A 601 ILE A 602 0 SHEET 2 AA6 5 VAL A 667 ILE A 670 1 O GLU A 669 N ILE A 602 SHEET 3 AA6 5 VAL A 656 LEU A 661 -1 N LEU A 660 O MET A 668 SHEET 4 AA6 5 ALA A 618 ASP A 623 -1 N LEU A 620 O LEU A 659 SHEET 5 AA6 5 GLY A 627 TYR A 633 -1 O GLY A 627 N ASP A 623 SHEET 1 AA7 4 GLN H 3 GLY H 8 0 SHEET 2 AA7 4 LEU H 18 TYR H 25 -1 O TYR H 25 N GLN H 3 SHEET 3 AA7 4 GLN H 77 MET H 82 -1 O MET H 82 N LEU H 18 SHEET 4 AA7 4 VAL H 67 ASP H 72 -1 N THR H 68 O LYS H 81 SHEET 1 AA8 6 LEU H 11 LEU H 12 0 SHEET 2 AA8 6 THR H 119 VAL H 123 1 O THR H 122 N LEU H 12 SHEET 3 AA8 6 ALA H 91 GLU H 98 -1 N TYR H 93 O THR H 119 SHEET 4 AA8 6 TYR H 33 GLN H 39 -1 N ILE H 37 O TYR H 94 SHEET 5 AA8 6 GLU H 46 ASN H 52 -1 O GLU H 46 N ARG H 38 SHEET 6 AA8 6 THR H 57 TYR H 59 -1 O ASN H 58 N GLU H 50 SHEET 1 AA9 4 LEU H 11 LEU H 12 0 SHEET 2 AA9 4 THR H 119 VAL H 123 1 O THR H 122 N LEU H 12 SHEET 3 AA9 4 ALA H 91 GLU H 98 -1 N TYR H 93 O THR H 119 SHEET 4 AA9 4 PHE H 112 TRP H 115 -1 O ASP H 113 N ARG H 97 SHEET 1 AB1 4 SER H 132 LEU H 136 0 SHEET 2 AB1 4 THR H 147 TYR H 157 -1 O LEU H 153 N PHE H 134 SHEET 3 AB1 4 TYR H 188 PRO H 197 -1 O TYR H 188 N TYR H 157 SHEET 4 AB1 4 VAL H 175 THR H 177 -1 N HIS H 176 O VAL H 193 SHEET 1 AB2 4 SER H 132 LEU H 136 0 SHEET 2 AB2 4 THR H 147 TYR H 157 -1 O LEU H 153 N PHE H 134 SHEET 3 AB2 4 TYR H 188 PRO H 197 -1 O TYR H 188 N TYR H 157 SHEET 4 AB2 4 VAL H 181 LEU H 182 -1 N VAL H 181 O SER H 189 SHEET 1 AB3 3 VAL H 162 TRP H 166 0 SHEET 2 AB3 3 TYR H 206 HIS H 212 -1 O ASN H 209 N SER H 165 SHEET 3 AB3 3 THR H 217 VAL H 223 -1 O VAL H 219 N VAL H 210 SHEET 1 AB4 4 LEU L 4 SER L 7 0 SHEET 2 AB4 4 ALA L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AB4 4 ASP L 71 ILE L 76 -1 O LEU L 74 N LEU L 21 SHEET 4 AB4 4 PHE L 63 SER L 68 -1 N SER L 64 O THR L 75 SHEET 1 AB5 6 SER L 10 LEU L 13 0 SHEET 2 AB5 6 THR L 103 ILE L 107 1 O GLU L 106 N LEU L 11 SHEET 3 AB5 6 ALA L 85 GLN L 91 -1 N ALA L 85 O LEU L 105 SHEET 4 AB5 6 ALA L 35 GLN L 39 -1 N TYR L 37 O TYR L 88 SHEET 5 AB5 6 ARG L 46 TYR L 50 -1 O ARG L 46 N GLN L 38 SHEET 6 AB5 6 SER L 54 ARG L 55 -1 O SER L 54 N TYR L 50 SHEET 1 AB6 4 SER L 10 LEU L 13 0 SHEET 2 AB6 4 THR L 103 ILE L 107 1 O GLU L 106 N LEU L 11 SHEET 3 AB6 4 ALA L 85 GLN L 91 -1 N ALA L 85 O LEU L 105 SHEET 4 AB6 4 SER L 98 PHE L 99 -1 O SER L 98 N GLN L 91 SHEET 1 AB7 4 SER L 115 PHE L 119 0 SHEET 2 AB7 4 THR L 130 PHE L 140 -1 O LEU L 136 N PHE L 117 SHEET 3 AB7 4 TYR L 174 SER L 183 -1 O TYR L 174 N PHE L 140 SHEET 4 AB7 4 SER L 160 VAL L 164 -1 N GLN L 161 O THR L 179 SHEET 1 AB8 4 ALA L 154 LEU L 155 0 SHEET 2 AB8 4 LYS L 146 VAL L 151 -1 N VAL L 151 O ALA L 154 SHEET 3 AB8 4 VAL L 192 THR L 198 -1 O GLU L 196 N GLN L 148 SHEET 4 AB8 4 VAL L 206 ASN L 211 -1 O VAL L 206 N VAL L 197 SHEET 1 AB9 3 LEU X 18 SER X 21 0 SHEET 2 AB9 3 SER X 78 MET X 83 -1 O LEU X 81 N LEU X 20 SHEET 3 AB9 3 ILE X 70 ASP X 73 -1 N SER X 71 O PHE X 80 SHEET 1 AC1 5 ILE X 58 TYR X 60 0 SHEET 2 AC1 5 GLU X 46 ILE X 51 -1 N LEU X 50 O TYR X 59 SHEET 3 AC1 5 MET X 34 GLN X 39 -1 N ARG X 38 O GLU X 46 SHEET 4 AC1 5 VAL X 93 GLY X 101 -1 O TYR X 95 N VAL X 37 SHEET 5 AC1 5 HIS X 104 TRP X 110 -1 O HIS X 106 N ALA X 100 SHEET 1 AC2 2 THR X 158 SER X 160 0 SHEET 2 AC2 2 ASN X 204 ASN X 206 -1 O ASN X 204 N SER X 160 SHEET 1 AC3 2 VAL X 170 THR X 172 0 SHEET 2 AC3 2 SER X 187 VAL X 189 -1 O VAL X 188 N HIS X 171 SHEET 1 AC4 2 VAL Y 3 LEU Y 4 0 SHEET 2 AC4 2 PHE Y 101 GLY Y 102 1 O PHE Y 101 N LEU Y 4 SHEET 1 AC5 3 VAL Y 18 ILE Y 20 0 SHEET 2 AC5 3 LEU Y 75 ILE Y 77 -1 O ILE Y 77 N VAL Y 18 SHEET 3 AC5 3 PHE Y 64 GLY Y 66 -1 N SER Y 65 O THR Y 76 SHEET 1 AC6 3 VAL Y 35 TYR Y 38 0 SHEET 2 AC6 3 ASP Y 87 SER Y 92 -1 O ASN Y 91 N SER Y 36 SHEET 3 AC6 3 THR Y 105 SER Y 106 -1 O THR Y 105 N TYR Y 88 SHEET 1 AC7 3 THR Y 120 LEU Y 121 0 SHEET 2 AC7 3 CYS Y 138 PHE Y 143 -1 O LEU Y 139 N THR Y 120 SHEET 3 AC7 3 TYR Y 176 SER Y 180 -1 O SER Y 180 N CYS Y 138 SHEET 1 AC8 3 THR Y 149 LYS Y 153 0 SHEET 2 AC8 3 TYR Y 195 THR Y 200 -1 O GLN Y 198 N ALA Y 151 SHEET 3 AC8 3 THR Y 205 VAL Y 210 -1 O VAL Y 206 N VAL Y 199 SSBOND 1 CYS A 120 CYS A 312 1555 1555 2.04 SSBOND 2 CYS A 278 CYS A 335 1555 1555 2.04 SSBOND 3 CYS A 454 CYS A 478 1555 1555 2.04 SSBOND 4 CYS A 534 CYS A 587 1555 1555 2.04 SSBOND 5 CYS A 612 CYS A 615 1555 1555 2.03 SSBOND 6 CYS B 28 CYS B 56 1555 1555 2.03 SSBOND 7 CYS B 29 CYS B 79 1555 1555 2.03 SSBOND 8 CYS H 22 CYS H 95 1555 1555 2.03 SSBOND 9 CYS H 152 CYS H 208 1555 1555 2.03 SSBOND 10 CYS L 23 CYS L 89 1555 1555 2.04 SSBOND 11 CYS L 135 CYS L 195 1555 1555 2.04 SSBOND 12 CYS X 22 CYS X 96 1555 1555 2.03 SSBOND 13 CYS X 147 CYS X 203 1555 1555 2.04 SSBOND 14 CYS Y 22 CYS Y 90 1555 1555 2.03 SSBOND 15 CYS Y 138 CYS Y 197 1555 1555 2.03 LINK ND2 ASN A 60 C1 NAG A 701 1555 1555 1.46 LINK C CYS A 153 N HIP A 154 1555 1555 1.32 LINK C HIP A 154 N LEU A 155 1555 1555 1.36 LINK ND2 ASN A 435 C1 NAG A 702 1555 1555 1.44 LINK ND2 ASN B 44 C1 NAG B 201 1555 1555 1.45 LINK ND2 ASN B 53 C1 NAG B 202 1555 1555 1.44 CISPEP 1 ASP H 113 PRO H 114 0 0.16 CISPEP 2 PHE H 158 PRO H 159 0 -0.53 CISPEP 3 GLU H 160 PRO H 161 0 -5.13 CISPEP 4 SER L 7 PRO L 8 0 -3.37 CISPEP 5 TYR L 141 PRO L 142 0 -9.08 CISPEP 6 TYR Y 144 PRO Y 145 0 -0.54 CRYST1 89.326 107.703 110.650 90.00 93.11 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011195 0.000000 0.000608 0.00000 SCALE2 0.000000 0.009285 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009051 0.00000