HEADER TRANSFERASE 03-SEP-21 7S2P TITLE CRYSTAL STRUCTURE OF THE F337L MUTATION OF TRYPANOSOMA CRUZI TITLE 2 GLUCOKINASE IN COMPLEX WITH INHIBITOR CBZ-GLCN COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOKINASE 1; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.1.2; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA CRUZI (STRAIN CL BRENER); SOURCE 3 ORGANISM_TAXID: 353153; SOURCE 4 STRAIN: CL BRENER; SOURCE 5 GENE: TC00.1047053510187.100; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRYPANOSOMA CRUZI, CHAGAS DISEASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.M.CAREY,R.B.NETTLES,L.DANESHIAN,M.CHRUSZCZ,E.L.D'ANTONIO REVDAT 3 18-OCT-23 7S2P 1 REMARK REVDAT 2 20-OCT-21 7S2P 1 REMARK REVDAT 1 06-OCT-21 7S2P 0 JRNL AUTH S.M.CAREY,R.B.NETTLES,L.DANESHIAN,M.CHRUSZCZ,E.L.D'ANTONIO JRNL TITL CRYSTAL STRUCTURE OF THE F337L MUTATION OF TRYPANOSOMA CRUZI JRNL TITL 2 GLUCOKINASE IN COMPLEX WITH INHIBITOR CBZ-GLCN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 31970 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1679 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2210 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.2860 REMARK 3 BIN FREE R VALUE SET COUNT : 89 REMARK 3 BIN FREE R VALUE : 0.2890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5627 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 52 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 71.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.67000 REMARK 3 B22 (A**2) : 2.15000 REMARK 3 B33 (A**2) : 0.29000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.31000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.385 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.259 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.206 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.396 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5795 ; 0.012 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 5488 ; 0.035 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7848 ; 1.670 ; 1.648 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12603 ; 2.353 ; 1.572 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 732 ; 7.257 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 288 ;30.739 ;21.667 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 964 ;13.979 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 41 ;18.318 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 736 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6577 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1323 ; 0.013 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 1 365 B 1 365 11026 0.110 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 129 REMARK 3 ORIGIN FOR THE GROUP (A): -21.276 -6.360 57.729 REMARK 3 T TENSOR REMARK 3 T11: 0.6633 T22: 0.3796 REMARK 3 T33: 0.0608 T12: -0.0684 REMARK 3 T13: -0.1323 T23: 0.0461 REMARK 3 L TENSOR REMARK 3 L11: 6.1441 L22: 2.8324 REMARK 3 L33: 4.6283 L12: 0.7126 REMARK 3 L13: -3.4626 L23: 0.0721 REMARK 3 S TENSOR REMARK 3 S11: 0.1254 S12: -1.2473 S13: -0.1191 REMARK 3 S21: 0.8158 S22: -0.2006 S23: -0.3775 REMARK 3 S31: 0.6145 S32: 0.5229 S33: 0.0753 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 130 A 366 REMARK 3 ORIGIN FOR THE GROUP (A): -26.016 13.148 38.197 REMARK 3 T TENSOR REMARK 3 T11: 0.2722 T22: 0.0183 REMARK 3 T33: 0.3555 T12: -0.0111 REMARK 3 T13: -0.0257 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 1.8282 L22: 2.1408 REMARK 3 L33: 1.6448 L12: 0.7782 REMARK 3 L13: -0.4528 L23: 0.3550 REMARK 3 S TENSOR REMARK 3 S11: 0.1431 S12: -0.0443 S13: 0.5474 REMARK 3 S21: 0.0816 S22: -0.0890 S23: 0.3681 REMARK 3 S31: -0.0173 S32: -0.1462 S33: -0.0542 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 215 REMARK 3 ORIGIN FOR THE GROUP (A): -28.573 -11.407 14.783 REMARK 3 T TENSOR REMARK 3 T11: 0.5676 T22: 0.4216 REMARK 3 T33: 0.1113 T12: -0.1800 REMARK 3 T13: -0.0160 T23: -0.0256 REMARK 3 L TENSOR REMARK 3 L11: 4.3497 L22: 1.9020 REMARK 3 L33: 0.9235 L12: 1.3526 REMARK 3 L13: -0.6606 L23: 0.5307 REMARK 3 S TENSOR REMARK 3 S11: -0.4830 S12: 1.2990 S13: 0.0074 REMARK 3 S21: -0.3467 S22: 0.3127 S23: 0.0274 REMARK 3 S31: 0.2909 S32: -0.3059 S33: 0.1703 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 216 B 367 REMARK 3 ORIGIN FOR THE GROUP (A): -9.872 2.105 15.257 REMARK 3 T TENSOR REMARK 3 T11: 0.4503 T22: 0.2335 REMARK 3 T33: 0.1945 T12: -0.0929 REMARK 3 T13: 0.0308 T23: 0.0549 REMARK 3 L TENSOR REMARK 3 L11: 3.0091 L22: 2.0888 REMARK 3 L33: 1.5582 L12: 0.7983 REMARK 3 L13: -0.3626 L23: 0.1997 REMARK 3 S TENSOR REMARK 3 S11: -0.2742 S12: 0.7699 S13: 0.2592 REMARK 3 S21: -0.4841 S22: 0.3347 S23: -0.3501 REMARK 3 S31: 0.0433 S32: 0.1203 S33: -0.0605 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 7S2P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-SEP-21. REMARK 100 THE DEPOSITION ID IS D_1000259507. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33656 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 35.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2Q2R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: A LIGAND-FREE TCGLCK(F337L) CRYSTAL REMARK 280 WAS SOAKED IN 1.0 MM CBZ-GLCN, 5.0% (V/V) DMSO, 0.1 M SODIUM REMARK 280 CITRATE (PH 7.0), 15% (W/V) PEG 3,350 FOR 24 HOURS, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.47550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -54.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -13 REMARK 465 GLY A -12 REMARK 465 ARG A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 GLY A -2 REMARK 465 MET A -1 REMARK 465 SER A 367 REMARK 465 MET B -13 REMARK 465 GLY B -12 REMARK 465 ARG B -11 REMARK 465 GLY B -10 REMARK 465 SER B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 GLY B -2 REMARK 465 MET B -1 REMARK 465 ALA B 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 16 CG CD CE NZ REMARK 470 GLU A 42 CG CD OE1 OE2 REMARK 470 LYS A 44 CG CD CE NZ REMARK 470 ASN A 45 CG OD1 ND2 REMARK 470 LYS A 58 CG CD CE NZ REMARK 470 SER A 79 OG REMARK 470 LYS B 44 CG CD CE NZ REMARK 470 ASN B 45 CG OD1 ND2 REMARK 470 LYS B 58 CG CD CE NZ REMARK 470 ARG B 59 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 64 CG CD OE1 OE2 REMARK 470 GLU B 71 CG CD OE1 OE2 REMARK 470 LYS B 82 CG CD CE NZ REMARK 470 ASN B 106 CG OD1 ND2 REMARK 470 LYS B 108 CG CD CE NZ REMARK 470 LYS B 266 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 17 135.54 -36.74 REMARK 500 ARG A 216 -111.75 -103.17 REMARK 500 ARG A 253 30.22 70.58 REMARK 500 LEU A 352 130.22 -170.68 REMARK 500 THR B 17 135.70 -38.36 REMARK 500 GLN B 199 40.53 -80.79 REMARK 500 ARG B 216 -107.57 -109.69 REMARK 500 LEU B 352 132.72 -172.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 MET A 215 ARG A 216 149.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7S2N RELATED DB: PDB DBREF 7S2P A 1 367 UNP Q4E4E1 Q4E4E1_TRYCC 1 367 DBREF 7S2P B 1 367 UNP Q4E4E1 Q4E4E1_TRYCC 1 367 SEQADV 7S2P MET A -13 UNP Q4E4E1 INITIATING METHIONINE SEQADV 7S2P GLY A -12 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P ARG A -11 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P GLY A -10 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P SER A -9 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P HIS A -8 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P HIS A -7 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P HIS A -6 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P HIS A -5 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P HIS A -4 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P HIS A -3 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P GLY A -2 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P MET A -1 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P ALA A 0 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P LEU A 337 UNP Q4E4E1 PHE 337 ENGINEERED MUTATION SEQADV 7S2P MET B -13 UNP Q4E4E1 INITIATING METHIONINE SEQADV 7S2P GLY B -12 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P ARG B -11 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P GLY B -10 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P SER B -9 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P HIS B -8 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P HIS B -7 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P HIS B -6 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P HIS B -5 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P HIS B -4 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P HIS B -3 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P GLY B -2 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P MET B -1 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P ALA B 0 UNP Q4E4E1 EXPRESSION TAG SEQADV 7S2P LEU B 337 UNP Q4E4E1 PHE 337 ENGINEERED MUTATION SEQRES 1 A 381 MET GLY ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET SEQRES 2 A 381 ALA MET ASN ILE LYS GLU LEU SER LEU HIS GLU LEU CYS SEQRES 3 A 381 GLU GLU LEU LYS THR PRO ALA TRP ASN VAL PRO LEU THR SEQRES 4 A 381 PHE VAL GLY ASP VAL GLY GLY THR SER ALA ARG MET GLY SEQRES 5 A 381 PHE VAL ARG GLU GLY LYS ASN ASP SER VAL HIS ALA CYS SEQRES 6 A 381 VAL THR ARG TYR SER MET LYS ARG LYS ASP ILE THR GLU SEQRES 7 A 381 LEU ILE GLU PHE PHE ASN GLU ILE ILE GLU LEU MET PRO SEQRES 8 A 381 ALA SER VAL ILE LYS ARG VAL LYS ALA GLY VAL ILE ASN SEQRES 9 A 381 VAL PRO GLY PRO VAL THR GLY GLY ALA VAL GLY GLY PRO SEQRES 10 A 381 PHE ASN ASN LEU LYS GLY ILE ALA ARG LEU SER ASP TYR SEQRES 11 A 381 PRO LYS ALA LEU PHE PRO PRO GLY ARG SER ALA ILE LEU SEQRES 12 A 381 ASN ASP LEU GLU ALA GLY GLY PHE GLY VAL LEU ALA VAL SEQRES 13 A 381 SER ASP ALA HIS VAL PHE SER GLU TYR PHE GLY VAL MET SEQRES 14 A 381 TRP GLU GLY THR GLN TRP ARG THR CYS GLU GLN GLU PRO SEQRES 15 A 381 ALA GLY SER VAL ILE GLY ARG GLY ARG CYS LEU VAL LEU SEQRES 16 A 381 ALA PRO GLY THR GLY LEU GLY SER SER LEU ILE TYR TYR SEQRES 17 A 381 ASN PRO MET ASN GLN GLN HIS ILE VAL VAL PRO LEU GLU SEQRES 18 A 381 LEU GLY SER GLN THR ILE PRO MET ARG LYS ASP ILE ASP SEQRES 19 A 381 TYR ILE GLN THR LEU HIS ALA GLU LEU LYS LEU LEU PRO SEQRES 20 A 381 ASN TYR GLU ASN MET VAL SER GLY ALA GLY LEU GLU PHE SEQRES 21 A 381 HIS TYR ARG GLN VAL VAL ARG GLY SER ARG PRO PRO CYS SEQRES 22 A 381 SER ALA GLY GLU ILE ALA LYS LEU ALA SER GLU GLY ASP SEQRES 23 A 381 ALA ASN ALA CYS LYS ALA MET LYS LYS TYR HIS GLU TYR SEQRES 24 A 381 LEU MET ARG VAL GLY SER GLU ALA SER MET ALA LEU LEU SEQRES 25 A 381 PRO LEU THR ILE VAL LEU VAL GLY ASP ASN ILE VAL ASN SEQRES 26 A 381 ASN ALA PHE PHE TYR ARG ASN PRO GLN ASN LEU LYS GLU SEQRES 27 A 381 MET HIS ARG GLU ALA LEU ASN HIS GLU MET GLU ARG LEU SEQRES 28 A 381 GLY PHE GLN SER ARG VAL THR TYR LEU ARG GLN LYS LYS SEQRES 29 A 381 LEU LEU ASN LEU ASN LEU MET GLY CYS TYR ARG CYS GLY SEQRES 30 A 381 LEU ASP LEU SER SEQRES 1 B 381 MET GLY ARG GLY SER HIS HIS HIS HIS HIS HIS GLY MET SEQRES 2 B 381 ALA MET ASN ILE LYS GLU LEU SER LEU HIS GLU LEU CYS SEQRES 3 B 381 GLU GLU LEU LYS THR PRO ALA TRP ASN VAL PRO LEU THR SEQRES 4 B 381 PHE VAL GLY ASP VAL GLY GLY THR SER ALA ARG MET GLY SEQRES 5 B 381 PHE VAL ARG GLU GLY LYS ASN ASP SER VAL HIS ALA CYS SEQRES 6 B 381 VAL THR ARG TYR SER MET LYS ARG LYS ASP ILE THR GLU SEQRES 7 B 381 LEU ILE GLU PHE PHE ASN GLU ILE ILE GLU LEU MET PRO SEQRES 8 B 381 ALA SER VAL ILE LYS ARG VAL LYS ALA GLY VAL ILE ASN SEQRES 9 B 381 VAL PRO GLY PRO VAL THR GLY GLY ALA VAL GLY GLY PRO SEQRES 10 B 381 PHE ASN ASN LEU LYS GLY ILE ALA ARG LEU SER ASP TYR SEQRES 11 B 381 PRO LYS ALA LEU PHE PRO PRO GLY ARG SER ALA ILE LEU SEQRES 12 B 381 ASN ASP LEU GLU ALA GLY GLY PHE GLY VAL LEU ALA VAL SEQRES 13 B 381 SER ASP ALA HIS VAL PHE SER GLU TYR PHE GLY VAL MET SEQRES 14 B 381 TRP GLU GLY THR GLN TRP ARG THR CYS GLU GLN GLU PRO SEQRES 15 B 381 ALA GLY SER VAL ILE GLY ARG GLY ARG CYS LEU VAL LEU SEQRES 16 B 381 ALA PRO GLY THR GLY LEU GLY SER SER LEU ILE TYR TYR SEQRES 17 B 381 ASN PRO MET ASN GLN GLN HIS ILE VAL VAL PRO LEU GLU SEQRES 18 B 381 LEU GLY SER GLN THR ILE PRO MET ARG LYS ASP ILE ASP SEQRES 19 B 381 TYR ILE GLN THR LEU HIS ALA GLU LEU LYS LEU LEU PRO SEQRES 20 B 381 ASN TYR GLU ASN MET VAL SER GLY ALA GLY LEU GLU PHE SEQRES 21 B 381 HIS TYR ARG GLN VAL VAL ARG GLY SER ARG PRO PRO CYS SEQRES 22 B 381 SER ALA GLY GLU ILE ALA LYS LEU ALA SER GLU GLY ASP SEQRES 23 B 381 ALA ASN ALA CYS LYS ALA MET LYS LYS TYR HIS GLU TYR SEQRES 24 B 381 LEU MET ARG VAL GLY SER GLU ALA SER MET ALA LEU LEU SEQRES 25 B 381 PRO LEU THR ILE VAL LEU VAL GLY ASP ASN ILE VAL ASN SEQRES 26 B 381 ASN ALA PHE PHE TYR ARG ASN PRO GLN ASN LEU LYS GLU SEQRES 27 B 381 MET HIS ARG GLU ALA LEU ASN HIS GLU MET GLU ARG LEU SEQRES 28 B 381 GLY PHE GLN SER ARG VAL THR TYR LEU ARG GLN LYS LYS SEQRES 29 B 381 LEU LEU ASN LEU ASN LEU MET GLY CYS TYR ARG CYS GLY SEQRES 30 B 381 LEU ASP LEU SER HET 4UZ A 401 22 HET SO4 A 402 5 HET 4UZ B 401 22 HETNAM 4UZ 2-{[(BENZYLOXY)CARBONYL]AMINO}-2-DEOXY-BETA-D- HETNAM 2 4UZ GLUCOPYRANOSE HETNAM SO4 SULFATE ION HETSYN 4UZ N-[(BENZYLOXY)CARBONYL]-BETA-D-GLUCOSAMINE; 2- HETSYN 2 4UZ {[(BENZYLOXY)CARBONYL]AMINO}-2-DEOXY-BETA-D-GLUCOSE; HETSYN 3 4UZ 2-{[(BENZYLOXY)CARBONYL]AMINO}-2-DEOXY-D-GLUCOSE; 2- HETSYN 4 4UZ {[(BENZYLOXY)CARBONYL]AMINO}-2-DEOXY-GLUCOSE FORMUL 3 4UZ 2(C14 H19 N O7) FORMUL 4 SO4 O4 S 2- FORMUL 6 HOH *52(H2 O) HELIX 1 AA1 SER A 7 LEU A 15 1 9 HELIX 2 AA2 LYS A 16 ASN A 21 5 6 HELIX 3 AA3 LYS A 44 ASP A 46 5 3 HELIX 4 AA4 ASP A 61 THR A 63 5 3 HELIX 5 AA5 GLU A 64 LEU A 75 1 12 HELIX 6 AA6 PRO A 77 LYS A 82 1 6 HELIX 7 AA7 SER A 114 TYR A 116 5 3 HELIX 8 AA8 ASP A 131 ALA A 145 1 15 HELIX 9 AA9 VAL A 147 TYR A 151 1 5 HELIX 10 AB1 GLN A 160 GLU A 165 1 6 HELIX 11 AB2 GLU A 207 GLN A 211 5 5 HELIX 12 AB3 ASP A 218 LYS A 230 1 13 HELIX 13 AB4 ASN A 234 VAL A 239 1 6 HELIX 14 AB5 SER A 240 ARG A 253 1 14 HELIX 15 AB6 SER A 260 GLU A 270 1 11 HELIX 16 AB7 ASP A 272 LEU A 298 1 27 HELIX 17 AB8 GLY A 306 ASN A 312 1 7 HELIX 18 AB9 ASN A 312 ASN A 318 1 7 HELIX 19 AC1 ASN A 318 LEU A 330 1 13 HELIX 20 AC2 ASN A 331 GLY A 338 5 8 HELIX 21 AC3 PHE A 339 VAL A 343 5 5 HELIX 22 AC4 ASN A 353 LEU A 366 1 14 HELIX 23 AC5 SER B 7 LEU B 15 1 9 HELIX 24 AC6 LYS B 16 ASN B 21 5 6 HELIX 25 AC7 LYS B 44 ASP B 46 5 3 HELIX 26 AC8 ASP B 61 THR B 63 5 3 HELIX 27 AC9 GLU B 64 LEU B 75 1 12 HELIX 28 AD1 PRO B 77 LYS B 82 1 6 HELIX 29 AD2 SER B 114 TYR B 116 5 3 HELIX 30 AD3 ASP B 131 ALA B 145 1 15 HELIX 31 AD4 VAL B 147 TYR B 151 1 5 HELIX 32 AD5 GLN B 160 GLU B 165 1 6 HELIX 33 AD6 GLU B 207 GLN B 211 5 5 HELIX 34 AD7 ASP B 218 LYS B 230 1 13 HELIX 35 AD8 ASN B 234 VAL B 239 1 6 HELIX 36 AD9 SER B 240 ARG B 253 1 14 HELIX 37 AE1 SER B 260 GLU B 270 1 11 HELIX 38 AE2 ASP B 272 LEU B 298 1 27 HELIX 39 AE3 GLY B 306 ASN B 312 1 7 HELIX 40 AE4 ASN B 312 ASN B 318 1 7 HELIX 41 AE5 ASN B 318 LEU B 330 1 13 HELIX 42 AE6 ASN B 331 GLY B 338 5 8 HELIX 43 AE7 PHE B 339 VAL B 343 5 5 HELIX 44 AE8 ASN B 353 SER B 367 1 15 SHEET 1 AA1 6 MET A 1 GLU A 5 0 SHEET 2 AA1 6 VAL A 48 SER A 56 1 O ALA A 50 N ASN A 2 SHEET 3 AA1 6 SER A 34 GLU A 42 -1 N ALA A 35 O TYR A 55 SHEET 4 AA1 6 LEU A 24 VAL A 30 -1 N ASP A 29 O ARG A 36 SHEET 5 AA1 6 VAL A 84 VAL A 91 1 O VAL A 88 N PHE A 26 SHEET 6 AA1 6 SER A 126 ASN A 130 1 O LEU A 129 N ILE A 89 SHEET 1 AA2 3 VAL A 95 THR A 96 0 SHEET 2 AA2 3 VAL A 100 GLY A 101 -1 O VAL A 100 N THR A 96 SHEET 3 AA2 3 ALA A 111 ARG A 112 -1 O ALA A 111 N GLY A 101 SHEET 1 AA3 6 PHE A 152 TRP A 156 0 SHEET 2 AA3 6 THR A 344 GLN A 348 -1 O TYR A 345 N MET A 155 SHEET 3 AA3 6 THR A 301 LEU A 304 1 N ILE A 302 O LEU A 346 SHEET 4 AA3 6 CYS A 178 PRO A 183 1 N LEU A 179 O THR A 301 SHEET 5 AA3 6 LEU A 187 ASN A 195 -1 O ILE A 192 N CYS A 178 SHEET 6 AA3 6 GLN A 200 LEU A 206 -1 O GLN A 200 N ASN A 195 SHEET 1 AA4 5 VAL B 48 SER B 56 0 SHEET 2 AA4 5 SER B 34 GLU B 42 -1 N ALA B 35 O TYR B 55 SHEET 3 AA4 5 LEU B 24 VAL B 30 -1 N ASP B 29 O ARG B 36 SHEET 4 AA4 5 VAL B 84 VAL B 91 1 O ALA B 86 N PHE B 26 SHEET 5 AA4 5 SER B 126 ASN B 130 1 O LEU B 129 N ILE B 89 SHEET 1 AA5 3 VAL B 95 THR B 96 0 SHEET 2 AA5 3 VAL B 100 GLY B 101 -1 O VAL B 100 N THR B 96 SHEET 3 AA5 3 ALA B 111 ARG B 112 -1 O ALA B 111 N GLY B 101 SHEET 1 AA6 6 PHE B 152 TRP B 156 0 SHEET 2 AA6 6 THR B 344 GLN B 348 -1 O TYR B 345 N MET B 155 SHEET 3 AA6 6 THR B 301 LEU B 304 1 N ILE B 302 O LEU B 346 SHEET 4 AA6 6 CYS B 178 PRO B 183 1 N LEU B 179 O THR B 301 SHEET 5 AA6 6 LEU B 187 TYR B 194 -1 O ILE B 192 N CYS B 178 SHEET 6 AA6 6 HIS B 201 LEU B 206 -1 O VAL B 204 N LEU B 191 CRYST1 68.227 78.951 77.027 90.00 94.86 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014657 0.000000 0.001246 0.00000 SCALE2 0.000000 0.012666 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013029 0.00000