HEADER PROTEIN BINDING 03-SEP-21 7S2R TITLE NANOBODY BOUND TO IL-2RG COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTOKINE RECEPTOR COMMON SUBUNIT GAMMA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: EXTRACELLULAR DOMAIN; COMPND 5 SYNONYM: INTERLEUKIN-2 RECEPTOR SUBUNIT GAMMA,IL-2 RECEPTOR SUBUNIT COMPND 6 GAMMA,IL-2R SUBUNIT GAMMA,IL-2RG,GAMMAC,P64; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: NANOBODY GAMMA-NB6; COMPND 10 CHAIN: B; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IL2RG; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK 293F; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: CAMELUS BACTRIANUS; SOURCE 11 ORGANISM_TAXID: 9837; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM_CELL_LINE: HEK 293F KEYWDS NANOBODY, CYTOKINE RECEPTOR, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR C.R.GLASSMAN,K.M.JUDE,M.YEN,K.C.GARCIA REVDAT 4 18-OCT-23 7S2R 1 REMARK REVDAT 3 27-APR-22 7S2R 1 JRNL REVDAT 2 06-APR-22 7S2R 1 JRNL REVDAT 1 30-MAR-22 7S2R 0 JRNL AUTH M.YEN,J.REN,Q.LIU,C.R.GLASSMAN,T.P.SHEAHAN,L.K.PICTON, JRNL AUTH 2 F.R.MOREIRA,A.RUSTAGI,K.M.JUDE,X.ZHAO,C.A.BLISH,R.S.BARIC, JRNL AUTH 3 L.L.SU,K.C.GARCIA JRNL TITL FACILE DISCOVERY OF SURROGATE CYTOKINE AGONISTS. JRNL REF CELL V. 185 1414 2022 JRNL REFN ISSN 1097-4172 JRNL PMID 35325595 JRNL DOI 10.1016/J.CELL.2022.02.025 REMARK 2 REMARK 2 RESOLUTION. 2.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 30520 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.248 REMARK 3 R VALUE (WORKING SET) : 0.246 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.540 REMARK 3 FREE R VALUE TEST SET COUNT : 2301 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.6400 - 6.2700 1.00 1927 158 0.2304 0.2592 REMARK 3 2 6.2700 - 4.9800 1.00 1826 149 0.2040 0.2018 REMARK 3 3 4.9800 - 4.3500 1.00 1811 148 0.1625 0.1828 REMARK 3 4 4.3500 - 3.9500 1.00 1784 145 0.2005 0.2387 REMARK 3 5 3.9500 - 3.6700 1.00 1772 145 0.2338 0.2800 REMARK 3 6 3.6700 - 3.4500 0.99 1754 144 0.2364 0.3203 REMARK 3 7 3.4500 - 3.2800 1.00 1775 144 0.2704 0.3083 REMARK 3 8 3.2800 - 3.1400 0.99 1749 144 0.2865 0.3221 REMARK 3 9 3.1400 - 3.0200 0.99 1743 143 0.2936 0.3219 REMARK 3 10 3.0200 - 2.9100 0.99 1735 140 0.3512 0.3503 REMARK 3 11 2.9100 - 2.8200 0.99 1761 142 0.3832 0.4063 REMARK 3 12 2.8200 - 2.7400 1.00 1727 141 0.4193 0.4020 REMARK 3 13 2.7400 - 2.6700 1.00 1742 141 0.4707 0.4659 REMARK 3 14 2.6700 - 2.6000 0.98 1710 141 0.5086 0.4952 REMARK 3 15 2.6000 - 2.5400 0.99 1751 145 0.4792 0.4725 REMARK 3 16 2.5400 - 2.4900 0.95 1652 131 0.5142 0.4876 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.531 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 38.444 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 96.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2880 REMARK 3 ANGLE : 0.551 3918 REMARK 3 CHIRALITY : 0.040 407 REMARK 3 PLANARITY : 0.005 497 REMARK 3 DIHEDRAL : 13.012 1022 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 52 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.5491 -38.4890 3.3885 REMARK 3 T TENSOR REMARK 3 T11: 1.1775 T22: 0.9225 REMARK 3 T33: 0.4902 T12: -0.0298 REMARK 3 T13: 0.0392 T23: 0.0471 REMARK 3 L TENSOR REMARK 3 L11: 2.0832 L22: 0.9082 REMARK 3 L33: 4.1565 L12: 1.1216 REMARK 3 L13: -3.0642 L23: -1.7819 REMARK 3 S TENSOR REMARK 3 S11: 0.0398 S12: -0.5820 S13: -0.1638 REMARK 3 S21: -0.0257 S22: -0.2110 S23: 0.0280 REMARK 3 S31: -0.1533 S32: 0.8121 S33: 0.1147 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 74 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.2387 -42.9320 9.7250 REMARK 3 T TENSOR REMARK 3 T11: 1.0546 T22: 1.1078 REMARK 3 T33: 0.5428 T12: -0.1683 REMARK 3 T13: -0.0670 T23: 0.0259 REMARK 3 L TENSOR REMARK 3 L11: 3.1653 L22: 5.1155 REMARK 3 L33: 2.7252 L12: 1.7506 REMARK 3 L13: -2.4473 L23: -0.0279 REMARK 3 S TENSOR REMARK 3 S11: 0.0551 S12: -0.6623 S13: -0.2408 REMARK 3 S21: 0.5993 S22: 0.1081 S23: -0.4198 REMARK 3 S31: 0.3175 S32: 0.1369 S33: 0.0585 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 92 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.7761 -40.7421 0.0367 REMARK 3 T TENSOR REMARK 3 T11: 0.7484 T22: 0.9466 REMARK 3 T33: 0.6728 T12: -0.2665 REMARK 3 T13: -0.0087 T23: 0.0046 REMARK 3 L TENSOR REMARK 3 L11: 3.6696 L22: -0.0121 REMARK 3 L33: 7.9862 L12: -0.2041 REMARK 3 L13: -1.1074 L23: -0.0743 REMARK 3 S TENSOR REMARK 3 S11: 0.4066 S12: 0.4643 S13: 0.3993 REMARK 3 S21: -0.0444 S22: -0.4284 S23: -0.2403 REMARK 3 S31: 0.7728 S32: -0.7711 S33: -0.0673 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 122 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.1749 -34.3788 0.5867 REMARK 3 T TENSOR REMARK 3 T11: 0.7825 T22: 0.8914 REMARK 3 T33: 0.5368 T12: -0.1378 REMARK 3 T13: -0.0424 T23: -0.0191 REMARK 3 L TENSOR REMARK 3 L11: 3.2809 L22: 3.1270 REMARK 3 L33: 3.0685 L12: 0.7133 REMARK 3 L13: -1.8648 L23: -2.8720 REMARK 3 S TENSOR REMARK 3 S11: 0.1666 S12: 0.0725 S13: -0.1963 REMARK 3 S21: 0.2870 S22: 0.0557 S23: 0.2606 REMARK 3 S31: -0.2173 S32: -0.7372 S33: -0.2162 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 173 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.8444 -32.6203 -30.1335 REMARK 3 T TENSOR REMARK 3 T11: 1.1235 T22: 1.0201 REMARK 3 T33: 0.6010 T12: -0.0194 REMARK 3 T13: 0.0129 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 5.4651 L22: 8.7521 REMARK 3 L33: 9.4389 L12: 6.2981 REMARK 3 L13: -6.9897 L23: -8.0578 REMARK 3 S TENSOR REMARK 3 S11: -1.0943 S12: 1.0581 S13: 0.0957 REMARK 3 S21: -0.9121 S22: 0.3757 S23: 0.3353 REMARK 3 S31: 0.5058 S32: -0.9273 S33: 0.6342 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 174 THROUGH 202 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.0776 -32.6387 -16.0487 REMARK 3 T TENSOR REMARK 3 T11: 0.8302 T22: 0.8609 REMARK 3 T33: 0.6630 T12: 0.1737 REMARK 3 T13: 0.0065 T23: -0.0882 REMARK 3 L TENSOR REMARK 3 L11: 7.0319 L22: 4.1441 REMARK 3 L33: 6.2270 L12: -2.6813 REMARK 3 L13: -0.9235 L23: 1.1129 REMARK 3 S TENSOR REMARK 3 S11: 0.2061 S12: 0.0293 S13: -0.5304 REMARK 3 S21: 0.0799 S22: 0.0476 S23: -0.4756 REMARK 3 S31: 0.8033 S32: 0.8920 S33: -0.2874 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 203 THROUGH 218 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.4532 -30.3543 -23.5863 REMARK 3 T TENSOR REMARK 3 T11: 0.9343 T22: 1.0046 REMARK 3 T33: 0.7765 T12: -0.0797 REMARK 3 T13: -0.0419 T23: 0.0133 REMARK 3 L TENSOR REMARK 3 L11: 3.1494 L22: 8.0764 REMARK 3 L33: 9.7942 L12: -3.1190 REMARK 3 L13: -0.4787 L23: 0.2829 REMARK 3 S TENSOR REMARK 3 S11: -0.1602 S12: 0.8887 S13: 0.0242 REMARK 3 S21: -0.4403 S22: -0.0325 S23: -0.4925 REMARK 3 S31: -1.1227 S32: 0.4357 S33: -0.2059 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 219 THROUGH 246 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.2277 -33.9009 -13.5489 REMARK 3 T TENSOR REMARK 3 T11: 0.7948 T22: 0.8238 REMARK 3 T33: 0.5818 T12: 0.0653 REMARK 3 T13: 0.0083 T23: -0.0170 REMARK 3 L TENSOR REMARK 3 L11: 4.0333 L22: 4.0443 REMARK 3 L33: 7.2465 L12: -4.0043 REMARK 3 L13: -5.4993 L23: 5.5121 REMARK 3 S TENSOR REMARK 3 S11: -0.2024 S12: -0.2661 S13: 0.0814 REMARK 3 S21: 0.3923 S22: 0.4716 S23: -0.2838 REMARK 3 S31: 0.8125 S32: 1.0019 S33: -0.2332 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 247 THROUGH 248 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.0249 -42.7463 -26.4249 REMARK 3 T TENSOR REMARK 3 T11: 1.0914 T22: 1.0816 REMARK 3 T33: 0.6399 T12: 0.3142 REMARK 3 T13: 0.3863 T23: -0.4962 REMARK 3 L TENSOR REMARK 3 L11: 1.8397 L22: 6.3238 REMARK 3 L33: 0.2484 L12: 1.4203 REMARK 3 L13: -0.2050 L23: -1.2453 REMARK 3 S TENSOR REMARK 3 S11: 0.9512 S12: -1.1539 S13: 0.4598 REMARK 3 S21: 1.5623 S22: -1.3168 S23: 4.0115 REMARK 3 S31: -7.1304 S32: -5.8892 S33: 0.5340 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.4592 -15.2472 -22.4408 REMARK 3 T TENSOR REMARK 3 T11: 0.6285 T22: 1.1401 REMARK 3 T33: 0.5416 T12: 0.1255 REMARK 3 T13: 0.0090 T23: -0.0875 REMARK 3 L TENSOR REMARK 3 L11: 4.6439 L22: 7.1363 REMARK 3 L33: 5.0864 L12: 1.2991 REMARK 3 L13: 0.4456 L23: 0.8146 REMARK 3 S TENSOR REMARK 3 S11: -0.2851 S12: 0.0801 S13: -0.3772 REMARK 3 S21: -0.8038 S22: 0.3029 S23: 0.8416 REMARK 3 S31: -0.1780 S32: -1.1588 S33: -0.1409 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 33 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.1149 -15.1894 -23.7730 REMARK 3 T TENSOR REMARK 3 T11: 0.7511 T22: 0.8077 REMARK 3 T33: 0.4363 T12: 0.0943 REMARK 3 T13: 0.0562 T23: -0.0444 REMARK 3 L TENSOR REMARK 3 L11: 4.6005 L22: 8.5673 REMARK 3 L33: 6.7072 L12: -0.2719 REMARK 3 L13: 0.4741 L23: -5.0746 REMARK 3 S TENSOR REMARK 3 S11: -0.2856 S12: 0.1517 S13: -0.0562 REMARK 3 S21: -0.0991 S22: 0.1426 S23: -0.5145 REMARK 3 S31: -0.0414 S32: -0.2143 S33: 0.0646 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 53 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.7031 -11.7231 -12.3660 REMARK 3 T TENSOR REMARK 3 T11: 1.1571 T22: 1.0766 REMARK 3 T33: 0.8156 T12: 0.1025 REMARK 3 T13: -0.0327 T23: -0.0683 REMARK 3 L TENSOR REMARK 3 L11: 9.2361 L22: 2.5213 REMARK 3 L33: 2.6755 L12: 0.7094 REMARK 3 L13: 2.0173 L23: -1.2674 REMARK 3 S TENSOR REMARK 3 S11: 0.1795 S12: -1.3644 S13: -0.8609 REMARK 3 S21: 1.6593 S22: -0.2003 S23: -0.2638 REMARK 3 S31: -0.3641 S32: 0.3747 S33: -0.1436 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 71 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.5099 -14.4201 -19.4416 REMARK 3 T TENSOR REMARK 3 T11: 0.5970 T22: 0.8760 REMARK 3 T33: 0.3966 T12: 0.0526 REMARK 3 T13: 0.0102 T23: -0.0356 REMARK 3 L TENSOR REMARK 3 L11: 2.5788 L22: 6.2587 REMARK 3 L33: 5.4283 L12: -0.1256 REMARK 3 L13: 1.1589 L23: -0.8960 REMARK 3 S TENSOR REMARK 3 S11: 0.2810 S12: 0.1081 S13: 0.0418 REMARK 3 S21: -0.1352 S22: -0.3128 S23: -0.1857 REMARK 3 S31: -0.3113 S32: -0.3461 S33: -0.0629 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 117 THROUGH 136 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.0868 -13.6137 -28.0109 REMARK 3 T TENSOR REMARK 3 T11: 0.8514 T22: 0.9225 REMARK 3 T33: 0.5174 T12: 0.0398 REMARK 3 T13: 0.0118 T23: -0.0259 REMARK 3 L TENSOR REMARK 3 L11: 3.3662 L22: 3.7504 REMARK 3 L33: 7.3680 L12: 0.9922 REMARK 3 L13: -0.9727 L23: -5.1974 REMARK 3 S TENSOR REMARK 3 S11: 0.0349 S12: 0.3952 S13: 0.1154 REMARK 3 S21: -0.1855 S22: 0.2070 S23: 0.0844 REMARK 3 S31: -0.1249 S32: -0.3654 S33: -0.3371 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7S2R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-SEP-21. REMARK 100 THE DEPOSITION ID IS D_1000259515. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JAN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30758 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.490 REMARK 200 RESOLUTION RANGE LOW (A) : 48.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 11.90 REMARK 200 R MERGE (I) : 0.32300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 12.40 REMARK 200 R MERGE FOR SHELL (I) : 7.27400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2B5I, 5LHR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 75.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M AMMONIUM SULFATE, 0.2M BIS-TRIS REMARK 280 PH5.5, VAPOR DIFFUSION, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 -X+1/2,Y,-Z+3/4 REMARK 290 6555 X,-Y+1/2,-Z+1/4 REMARK 290 7555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X,-Y,Z REMARK 290 11555 -Y+1/2,X,Z+3/4 REMARK 290 12555 Y,-X+1/2,Z+1/4 REMARK 290 13555 -X,Y+1/2,-Z+1/4 REMARK 290 14555 X+1/2,-Y,-Z+3/4 REMARK 290 15555 Y,X,-Z REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 60.04100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 60.04100 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 118.69000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 60.04100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 59.34500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 60.04100 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 178.03500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 60.04100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 178.03500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.04100 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 59.34500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 60.04100 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 60.04100 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 118.69000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 60.04100 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 60.04100 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 118.69000 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 60.04100 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 178.03500 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 60.04100 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 59.34500 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 60.04100 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 59.34500 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 60.04100 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 178.03500 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 60.04100 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 60.04100 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 118.69000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -93.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 A 312 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 249 REMARK 465 THR A 250 REMARK 465 SER A 251 REMARK 465 LYS A 252 REMARK 465 GLU A 253 REMARK 465 ASN A 254 REMARK 465 HIS A 255 REMARK 465 HIS A 256 REMARK 465 HIS A 257 REMARK 465 HIS A 258 REMARK 465 HIS A 259 REMARK 465 HIS A 260 REMARK 465 GLY B 137 REMARK 465 SER B 138 REMARK 465 GLY B 139 REMARK 465 LEU B 140 REMARK 465 ASN B 141 REMARK 465 ASP B 142 REMARK 465 ILE B 143 REMARK 465 PHE B 144 REMARK 465 GLU B 145 REMARK 465 ALA B 146 REMARK 465 GLN B 147 REMARK 465 LYS B 148 REMARK 465 ILE B 149 REMARK 465 GLU B 150 REMARK 465 TRP B 151 REMARK 465 HIS B 152 REMARK 465 GLU B 153 REMARK 465 HIS B 154 REMARK 465 HIS B 155 REMARK 465 HIS B 156 REMARK 465 HIS B 157 REMARK 465 HIS B 158 REMARK 465 HIS B 159 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 92 CG CD CE NZ REMARK 470 LYS A 98 CG CD CE NZ REMARK 470 LYS A 101 CG CD CE NZ REMARK 470 GLU A 110 CG CD OE1 OE2 REMARK 470 LYS A 120 CG CD CE NZ REMARK 470 ARG A 139 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 30 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 57 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 58 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 67 32.96 37.09 REMARK 500 GLU A 109 61.67 62.36 REMARK 500 ASP A 203 -152.32 -87.35 REMARK 500 SER A 212 86.32 58.08 REMARK 500 REMARK 500 REMARK: NULL DBREF 7S2R A 55 254 UNP P31785 IL2RG_HUMAN 55 254 DBREF 7S2R B 1 159 PDB 7S2R 7S2R 1 159 SEQADV 7S2R ALA A 52 UNP P31785 CLONING ARTIFACT SEQADV 7S2R ASP A 53 UNP P31785 CLONING ARTIFACT SEQADV 7S2R PRO A 54 UNP P31785 CLONING ARTIFACT SEQADV 7S2R HIS A 255 UNP P31785 EXPRESSION TAG SEQADV 7S2R HIS A 256 UNP P31785 EXPRESSION TAG SEQADV 7S2R HIS A 257 UNP P31785 EXPRESSION TAG SEQADV 7S2R HIS A 258 UNP P31785 EXPRESSION TAG SEQADV 7S2R HIS A 259 UNP P31785 EXPRESSION TAG SEQADV 7S2R HIS A 260 UNP P31785 EXPRESSION TAG SEQRES 1 A 209 ALA ASP PRO LEU PRO LEU PRO GLU VAL GLN CYS PHE VAL SEQRES 2 A 209 PHE ASN VAL GLU TYR MET ASN CYS THR TRP ASN SER SER SEQRES 3 A 209 SER GLU PRO GLN PRO THR ASN LEU THR LEU HIS TYR TRP SEQRES 4 A 209 TYR LYS ASN SER ASP ASN ASP LYS VAL GLN LYS CYS SER SEQRES 5 A 209 HIS TYR LEU PHE SER GLU GLU ILE THR SER GLY CYS GLN SEQRES 6 A 209 LEU GLN LYS LYS GLU ILE HIS LEU TYR GLN THR PHE VAL SEQRES 7 A 209 VAL GLN LEU GLN ASP PRO ARG GLU PRO ARG ARG GLN ALA SEQRES 8 A 209 THR GLN MET LEU LYS LEU GLN ASN LEU VAL ILE PRO TRP SEQRES 9 A 209 ALA PRO GLU ASN LEU THR LEU HIS LYS LEU SER GLU SER SEQRES 10 A 209 GLN LEU GLU LEU ASN TRP ASN ASN ARG PHE LEU ASN HIS SEQRES 11 A 209 CYS LEU GLU HIS LEU VAL GLN TYR ARG THR ASP TRP ASP SEQRES 12 A 209 HIS SER TRP THR GLU GLN SER VAL ASP TYR ARG HIS LYS SEQRES 13 A 209 PHE SER LEU PRO SER VAL ASP GLY GLN LYS ARG TYR THR SEQRES 14 A 209 PHE ARG VAL ARG SER ARG PHE ASN PRO LEU CYS GLY SER SEQRES 15 A 209 ALA GLN HIS TRP SER GLU TRP SER HIS PRO ILE HIS TRP SEQRES 16 A 209 GLY SER ASN THR SER LYS GLU ASN HIS HIS HIS HIS HIS SEQRES 17 A 209 HIS SEQRES 1 B 159 GLN VAL GLN LEU GLN GLU SER GLY GLY GLY SER VAL GLN SEQRES 2 B 159 ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 B 159 TYR THR TYR ARG ASP TYR TYR MET GLY TRP PHE ARG GLN SEQRES 4 B 159 ALA PRO GLY ARG GLU ARG GLU GLY VAL ALA SER ILE TYR SEQRES 5 B 159 THR ARG GLY SER ARG GLU GLY SER THR ARG TYR SER SER SEQRES 6 B 159 SER VAL GLU GLY ARG PHE THR ILE THR LEU ASP THR ALA SEQRES 7 B 159 LYS ASN THR LEU TYR LEU GLN MET ASN SER LEU LYS PRO SEQRES 8 B 159 GLU ASP THR ALA MET TYR TYR CYS ALA ALA ASP ASP ARG SEQRES 9 B 159 THR TRP LEU PRO ARG VAL GLN LEU GLY GLY PRO ARG GLU SEQRES 10 B 159 ASN GLU TYR ASN TYR TRP GLY GLN GLY THR GLN VAL THR SEQRES 11 B 159 VAL SER SER GLY ALA PRO GLY SER GLY LEU ASN ASP ILE SEQRES 12 B 159 PHE GLU ALA GLN LYS ILE GLU TRP HIS GLU HIS HIS HIS SEQRES 13 B 159 HIS HIS HIS HET NAG C 1 14 HET NAG C 2 14 HET NAG A 301 14 HET NAG A 302 14 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET SO4 A 306 5 HET GOL A 307 6 HET GOL A 308 6 HET GOL A 309 6 HET GOL A 310 6 HET SO4 A 311 5 HET SO4 A 312 5 HET SO4 B 201 5 HET SO4 B 202 5 HET GOL B 203 6 HET GOL B 204 6 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 6 SO4 8(O4 S 2-) FORMUL 10 GOL 6(C3 H8 O3) FORMUL 20 HOH *26(H2 O) HELIX 1 AA1 LYS A 120 ILE A 122 5 3 HELIX 2 AA2 LYS A 147 ASN A 150 5 4 HELIX 3 AA3 LEU A 179 LEU A 183 5 5 HELIX 4 AA4 LYS B 90 THR B 94 5 5 HELIX 5 AA5 ARG B 116 TYR B 120 5 5 SHEET 1 AA1 5 TYR A 105 PHE A 107 0 SHEET 2 AA1 5 THR A 112 GLN A 118 -1 O SER A 113 N LEU A 106 SHEET 3 AA1 5 TYR A 69 THR A 73 -1 N CYS A 72 O CYS A 115 SHEET 4 AA1 5 GLN A 61 PHE A 65 -1 N GLN A 61 O THR A 73 SHEET 5 AA1 5 VAL A 152 ILE A 153 1 O ILE A 153 N VAL A 64 SHEET 1 AA2 4 GLN A 100 LYS A 101 0 SHEET 2 AA2 4 THR A 86 TYR A 91 -1 N TYR A 89 O GLN A 100 SHEET 3 AA2 4 PHE A 128 ASP A 134 -1 O GLN A 131 N HIS A 88 SHEET 4 AA2 4 GLU A 137 LEU A 146 -1 O LEU A 146 N PHE A 128 SHEET 1 AA3 3 GLU A 158 SER A 166 0 SHEET 2 AA3 3 GLN A 169 ASN A 175 -1 O ASN A 175 N GLU A 158 SHEET 3 AA3 3 LYS A 207 SER A 209 -1 O PHE A 208 N LEU A 172 SHEET 1 AA4 4 THR A 198 VAL A 202 0 SHEET 2 AA4 4 GLU A 184 THR A 191 -1 N VAL A 187 O GLN A 200 SHEET 3 AA4 4 TYR A 219 ARG A 226 -1 O ARG A 222 N GLN A 188 SHEET 4 AA4 4 ILE A 244 TRP A 246 -1 O TRP A 246 N TYR A 219 SHEET 1 AA5 4 VAL B 2 SER B 7 0 SHEET 2 AA5 4 LEU B 18 GLY B 26 -1 O SER B 25 N GLN B 3 SHEET 3 AA5 4 THR B 81 MET B 86 -1 O MET B 86 N LEU B 18 SHEET 4 AA5 4 PHE B 71 ASP B 76 -1 N ASP B 76 O THR B 81 SHEET 1 AA6 6 GLY B 10 GLN B 13 0 SHEET 2 AA6 6 THR B 127 SER B 132 1 O THR B 130 N VAL B 12 SHEET 3 AA6 6 ALA B 95 ASP B 102 -1 N TYR B 97 O THR B 127 SHEET 4 AA6 6 TYR B 33 GLN B 39 -1 N PHE B 37 O TYR B 98 SHEET 5 AA6 6 ARG B 45 TYR B 52 -1 O VAL B 48 N TRP B 36 SHEET 6 AA6 6 THR B 61 TYR B 63 -1 O ARG B 62 N SER B 50 SHEET 1 AA7 4 GLY B 10 GLN B 13 0 SHEET 2 AA7 4 THR B 127 SER B 132 1 O THR B 130 N VAL B 12 SHEET 3 AA7 4 ALA B 95 ASP B 102 -1 N TYR B 97 O THR B 127 SHEET 4 AA7 4 TYR B 122 TRP B 123 -1 O TYR B 122 N ALA B 101 SSBOND 1 CYS A 62 CYS A 72 1555 1555 2.03 SSBOND 2 CYS A 102 CYS A 115 1555 1555 2.03 SSBOND 3 CYS A 182 CYS A 231 1555 1555 2.04 SSBOND 4 CYS B 22 CYS B 99 1555 1555 2.03 LINK ND2 ASN A 71 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 84 C1 NAG A 301 1555 1555 1.44 LINK ND2 ASN A 159 C1 NAG A 302 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 CISPEP 1 ASN A 228 PRO A 229 0 -2.71 CRYST1 120.082 120.082 237.380 90.00 90.00 90.00 I 41 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008328 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008328 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004213 0.00000