HEADER HYDROLASE 09-SEP-21 7S51 TITLE STRUCTURE OF C208A SORTASE A FROM STREPTOCOCCUS PYOGENES BOUND TO TITLE 2 LPATA PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SORTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SORTASE A,SORTASE PROTEIN SRTA; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: LEU-PRO-ALA-THR-ALA; COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PYOGENES; SOURCE 3 ORGANISM_TAXID: 1314; SOURCE 4 GENE: SRTA, SRTA_1, SRTA_2, E0F66_05345, E0F67_00760, FGO82_09960, SOURCE 5 FNL90_04725, FNL91_04720, GQ677_05600, GQR49_04420, GQY31_04460, SOURCE 6 GQY92_04850, GTK43_04765, GTK52_04270, GTK53_04530, GTK54_03910, SOURCE 7 GUA39_04435, IB935_04675, IB936_04605, IB937_04535, IB938_05195, SOURCE 8 KUN2590_09100, KUN4944_08330, MGAS2221_0893, SAMEA1407055_00305, SOURCE 9 SAMEA1711644_00960, SAMEA3918953_00457, SPNIH34_10200, SOURCE 10 SPNIH35_09070; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 12 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 13 EXPRESSION_SYSTEM_PLASMID: PET28A(+); SOURCE 14 MOL_ID: 2; SOURCE 15 SYNTHETIC: YES; SOURCE 16 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 17 ORGANISM_TAXID: 32630 KEYWDS SORTASE-FOLD, HYDROLASE, SORTASE, EIGHT-STRANDED BETA BARREL, KEYWDS 2 TRANSPEPTIDASE, HOUSEKEEPING SORTASE, SURFACE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.A.JOHNSON,J.E.SVENDSEN,J.M.ANTOS,J.F.AMACHER REVDAT 5 15-NOV-23 7S51 1 LINK ATOM REVDAT 4 18-OCT-23 7S51 1 REMARK REVDAT 3 12-OCT-22 7S51 1 JRNL REVDAT 2 14-SEP-22 7S51 1 JRNL REVDAT 1 07-SEP-22 7S51 0 JRNL AUTH D.A.JOHNSON,I.M.PIPER,B.A.VOGEL,S.N.JACKSON,J.E.SVENDSEN, JRNL AUTH 2 H.M.KODAMA,D.E.LEE,K.M.LINDBLOM,J.MCCARTY,J.M.ANTOS, JRNL AUTH 3 J.F.AMACHER JRNL TITL STRUCTURES OF STREPTOCOCCUS PYOGENES CLASS A SORTASE IN JRNL TITL 2 COMPLEX WITH SUBSTRATE AND PRODUCT MIMICS PROVIDE KEY JRNL TITL 3 DETAILS OF TARGET RECOGNITION. JRNL REF J.BIOL.CHEM. V. 298 02446 2022 JRNL REFN ESSN 1083-351X JRNL PMID 36055407 JRNL DOI 10.1016/J.JBC.2022.102446 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 56989 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.213 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 2838 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.9370 - 3.7987 1.00 2908 150 0.2343 0.2567 REMARK 3 2 3.7987 - 3.0152 1.00 2799 128 0.2129 0.2287 REMARK 3 3 3.0152 - 2.6341 1.00 2743 161 0.2290 0.2459 REMARK 3 4 2.6341 - 2.3933 1.00 2721 168 0.2224 0.2546 REMARK 3 5 2.3933 - 2.2218 1.00 2727 127 0.2096 0.2125 REMARK 3 6 2.2218 - 2.0908 1.00 2678 161 0.2070 0.2243 REMARK 3 7 2.0908 - 1.9861 0.99 2684 162 0.2021 0.2194 REMARK 3 8 1.9861 - 1.8996 1.00 2692 132 0.1949 0.2472 REMARK 3 9 1.8996 - 1.8265 0.99 2719 117 0.1920 0.1920 REMARK 3 10 1.8265 - 1.7634 1.00 2696 161 0.2080 0.2189 REMARK 3 11 1.7634 - 1.7083 1.00 2705 106 0.2016 0.2612 REMARK 3 12 1.7083 - 1.6595 1.00 2700 140 0.2047 0.2300 REMARK 3 13 1.6595 - 1.6158 1.00 2707 124 0.2014 0.2309 REMARK 3 14 1.6158 - 1.5763 1.00 2676 138 0.1932 0.2517 REMARK 3 15 1.5763 - 1.5405 1.00 2688 120 0.1891 0.2001 REMARK 3 16 1.5405 - 1.5077 1.00 2678 151 0.1999 0.2402 REMARK 3 17 1.5077 - 1.4776 1.00 2624 168 0.2054 0.2427 REMARK 3 18 1.4776 - 1.4497 1.00 2708 140 0.2179 0.2716 REMARK 3 19 1.4497 - 1.4238 1.00 2666 142 0.2399 0.2546 REMARK 3 20 1.4238 - 1.4000 0.99 2632 142 0.2835 0.3069 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.510 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.34 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2732 REMARK 3 ANGLE : 0.988 3708 REMARK 3 CHIRALITY : 0.082 429 REMARK 3 PLANARITY : 0.005 483 REMARK 3 DIHEDRAL : 18.740 1004 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7S51 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-SEP-21. REMARK 100 THE DEPOSITION ID IS D_1000259629. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-20 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.977410 REMARK 200 MONOCHROMATOR : SI(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57131 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 48.940 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 12.60 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 9.80 REMARK 200 R MERGE FOR SHELL (I) : 0.47900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3FN5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 6, 34% (W/V) PEG 8000, REMARK 280 0.1 M SODIUM ACETATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.48950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.50950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.28300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.50950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.48950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.28300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 7820 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -4.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 80 REMARK 465 SER A 81 REMARK 465 VAL A 82 REMARK 465 LEU A 83 REMARK 465 GLN A 84 REMARK 465 ALA A 85 REMARK 465 GLN A 86 REMARK 465 MET A 87 REMARK 465 ALA A 88 REMARK 465 LYS C 8 REMARK 465 DNP C 9 REMARK 465 LYS D 8 REMARK 465 DNP D 9 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 304 O HOH A 339 1.72 REMARK 500 O HOH B 309 O HOH B 341 1.98 REMARK 500 O HOH A 367 O HOH B 324 2.07 REMARK 500 O HOH C 101 O HOH C 102 2.08 REMARK 500 O HOH A 375 O HOH C 101 2.11 REMARK 500 O HOH B 328 O HOH B 332 2.11 REMARK 500 O GLY B 146 O HOH B 301 2.12 REMARK 500 O HOH A 416 O HOH A 417 2.14 REMARK 500 OE1 GLU B 212 O HOH B 302 2.17 REMARK 500 O HOH A 364 O HOH A 417 2.17 REMARK 500 O HOH B 316 O HOH B 404 2.18 REMARK 500 O HOH A 325 O HOH A 374 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 331 O HOH B 375 1455 2.12 REMARK 500 O HOH B 402 O HOH B 405 2654 2.17 REMARK 500 O HOH A 302 O HOH B 355 3654 2.18 REMARK 500 NZ LYS A 174 O HOH B 301 1455 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 BE2 C 1 CA - C - N ANGL. DEV. = -15.3 DEGREES REMARK 500 BE2 D 1 CA - C - N ANGL. DEV. = 17.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 154 -129.70 53.76 REMARK 500 LYS A 172 -23.31 82.00 REMARK 500 ASN A 241 43.00 -95.87 REMARK 500 LEU B 154 -129.61 52.98 REMARK 500 LYS B 172 -24.30 84.74 REMARK 500 LYS B 172 -23.34 84.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 BE2 C 1 LEU C 2 142.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 BE2 C 1 -12.95 REMARK 500 BE2 D 1 13.47 REMARK 500 REMARK 500 REMARK: NULL DBREF1 7S51 A 81 249 UNP A0A4U7I1I9_STRPY DBREF2 7S51 A A0A4U7I1I9 81 249 DBREF1 7S51 B 81 249 UNP A0A4U7I1I9_STRPY DBREF2 7S51 B A0A4U7I1I9 81 249 DBREF 7S51 C 1 9 PDB 7S51 7S51 1 9 DBREF 7S51 D 1 9 PDB 7S51 7S51 1 9 SEQADV 7S51 SER A 80 UNP A0A4U7I1I EXPRESSION TAG SEQADV 7S51 ALA A 208 UNP A0A4U7I1I CYS 208 ENGINEERED MUTATION SEQADV 7S51 SER B 80 UNP A0A4U7I1I EXPRESSION TAG SEQADV 7S51 ALA B 208 UNP A0A4U7I1I CYS 208 ENGINEERED MUTATION SEQRES 1 A 170 SER SER VAL LEU GLN ALA GLN MET ALA ALA GLN GLN LEU SEQRES 2 A 170 PRO VAL ILE GLY GLY ILE ALA ILE PRO GLU LEU GLY ILE SEQRES 3 A 170 ASN LEU PRO ILE PHE LYS GLY LEU GLY ASN THR GLU LEU SEQRES 4 A 170 ILE TYR GLY ALA GLY THR MET LYS GLU GLU GLN VAL MET SEQRES 5 A 170 GLY GLY GLU ASN ASN TYR SER LEU ALA SER HIS HIS ILE SEQRES 6 A 170 PHE GLY ILE THR GLY SER SER GLN MET LEU PHE SER PRO SEQRES 7 A 170 LEU GLU ARG ALA GLN ASN GLY MET SER ILE TYR LEU THR SEQRES 8 A 170 ASP LYS GLU LYS ILE TYR GLU TYR ILE ILE LYS ASP VAL SEQRES 9 A 170 PHE THR VAL ALA PRO GLU ARG VAL ASP VAL ILE ASP ASP SEQRES 10 A 170 THR ALA GLY LEU LYS GLU VAL THR LEU VAL THR ALA THR SEQRES 11 A 170 ASP ILE GLU ALA THR GLU ARG ILE ILE VAL LYS GLY GLU SEQRES 12 A 170 LEU LYS THR GLU TYR ASP PHE ASP LYS ALA PRO ALA ASP SEQRES 13 A 170 VAL LEU LYS ALA PHE ASN HIS SER TYR ASN GLN VAL SER SEQRES 14 A 170 THR SEQRES 1 B 170 SER SER VAL LEU GLN ALA GLN MET ALA ALA GLN GLN LEU SEQRES 2 B 170 PRO VAL ILE GLY GLY ILE ALA ILE PRO GLU LEU GLY ILE SEQRES 3 B 170 ASN LEU PRO ILE PHE LYS GLY LEU GLY ASN THR GLU LEU SEQRES 4 B 170 ILE TYR GLY ALA GLY THR MET LYS GLU GLU GLN VAL MET SEQRES 5 B 170 GLY GLY GLU ASN ASN TYR SER LEU ALA SER HIS HIS ILE SEQRES 6 B 170 PHE GLY ILE THR GLY SER SER GLN MET LEU PHE SER PRO SEQRES 7 B 170 LEU GLU ARG ALA GLN ASN GLY MET SER ILE TYR LEU THR SEQRES 8 B 170 ASP LYS GLU LYS ILE TYR GLU TYR ILE ILE LYS ASP VAL SEQRES 9 B 170 PHE THR VAL ALA PRO GLU ARG VAL ASP VAL ILE ASP ASP SEQRES 10 B 170 THR ALA GLY LEU LYS GLU VAL THR LEU VAL THR ALA THR SEQRES 11 B 170 ASP ILE GLU ALA THR GLU ARG ILE ILE VAL LYS GLY GLU SEQRES 12 B 170 LEU LYS THR GLU TYR ASP PHE ASP LYS ALA PRO ALA ASP SEQRES 13 B 170 VAL LEU LYS ALA PHE ASN HIS SER TYR ASN GLN VAL SER SEQRES 14 B 170 THR SEQRES 1 C 9 BE2 LEU PRO ALA THR ALA GLY LYS DNP SEQRES 1 D 9 BE2 LEU PRO ALA THR ALA GLY LYS DNP HET BE2 C 1 9 HET BE2 D 1 9 HETNAM BE2 2-AMINOBENZOIC ACID FORMUL 3 BE2 2(C7 H7 N O2) FORMUL 5 HOH *257(H2 O) HELIX 1 AA1 PRO A 101 GLY A 104 5 4 HELIX 2 AA2 GLY A 114 GLY A 121 1 8 HELIX 3 AA3 GLY A 149 MET A 153 5 5 HELIX 4 AA4 PHE A 155 ALA A 161 5 7 HELIX 5 AA5 ARG A 190 ASP A 195 5 6 HELIX 6 AA6 ASP A 230 ALA A 232 5 3 HELIX 7 AA7 PRO A 233 ASN A 241 1 9 HELIX 8 AA8 SER B 81 ALA B 89 5 9 HELIX 9 AA9 PRO B 101 GLY B 104 5 4 HELIX 10 AB1 GLY B 114 GLY B 121 1 8 HELIX 11 AB2 GLY B 149 MET B 153 5 5 HELIX 12 AB3 PHE B 155 ALA B 161 5 7 HELIX 13 AB4 ARG B 190 ASP B 195 5 6 HELIX 14 AB5 ASP B 230 ALA B 232 5 3 HELIX 15 AB6 PRO B 233 ASN B 241 1 9 SHEET 1 AA1 9 GLY A 96 ILE A 100 0 SHEET 2 AA1 9 ILE A 105 PHE A 110 -1 O LEU A 107 N ILE A 98 SHEET 3 AA1 9 ALA A 122 THR A 124 1 O ALA A 122 N PHE A 110 SHEET 4 AA1 9 ASN A 136 ALA A 140 -1 O ALA A 140 N GLY A 123 SHEET 5 AA1 9 GLU A 202 ALA A 208 1 O GLU A 202 N TYR A 137 SHEET 6 AA1 9 ARG A 216 ASP A 228 -1 O VAL A 219 N LEU A 205 SHEET 7 AA1 9 LYS A 174 VAL A 186 -1 N GLU A 177 O LYS A 224 SHEET 8 AA1 9 SER A 166 THR A 170 -1 N ILE A 167 O TYR A 178 SHEET 9 AA1 9 GLY A 96 ILE A 100 -1 N ALA A 99 O TYR A 168 SHEET 1 AA2 9 GLY B 96 ILE B 100 0 SHEET 2 AA2 9 ILE B 105 PHE B 110 -1 O ILE B 109 N GLY B 96 SHEET 3 AA2 9 ALA B 122 THR B 124 1 O ALA B 122 N PHE B 110 SHEET 4 AA2 9 ASN B 136 ALA B 140 -1 O ALA B 140 N GLY B 123 SHEET 5 AA2 9 GLU B 202 ALA B 208 1 O GLU B 202 N TYR B 137 SHEET 6 AA2 9 ARG B 216 ASP B 228 -1 O ILE B 217 N THR B 207 SHEET 7 AA2 9 LYS B 174 VAL B 186 -1 N GLU B 177 O LYS B 224 SHEET 8 AA2 9 SER B 166 THR B 170 -1 N ILE B 167 O TYR B 178 SHEET 9 AA2 9 GLY B 96 ILE B 100 -1 N ALA B 99 O TYR B 168 LINK C BE2 C 1 N LEU C 2 1555 1555 1.23 LINK C BE2 D 1 N LEU D 2 1555 1555 1.30 CRYST1 58.979 64.566 75.019 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016955 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015488 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013330 0.00000