data_7S6O # _entry.id 7S6O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.370 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7S6O pdb_00007s6o 10.2210/pdb7s6o/pdb WWPDB D_1000259372 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details 'Crystal structure of an open conformation of Lys48-linked diubiquitin at pH 7.5' _pdbx_database_related.db_id 3NS8 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7S6O _pdbx_database_status.recvd_initial_deposition_date 2021-09-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Osipiuk, J.' 1 ? 'Tesar, C.' 2 ? 'Lanham, B.T.' 3 ? 'Wydorski, P.' 4 ? 'Fushman, D.' 5 ? 'Joachimiak, L.' 6 ? 'Joachimiak, A.' 7 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 14 _citation.language ? _citation.page_first 2366 _citation.page_last 2366 _citation.title 'Dual domain recognition determines SARS-CoV-2 PLpro selectivity for human ISG15 and K48-linked di-ubiquitin.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-023-38031-5 _citation.pdbx_database_id_PubMed 37185902 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wydorski, P.M.' 1 0000-0002-6983-421X primary 'Osipiuk, J.' 2 ? primary 'Lanham, B.T.' 3 ? primary 'Tesar, C.' 4 ? primary 'Endres, M.' 5 ? primary 'Engle, E.' 6 ? primary 'Jedrzejczak, R.' 7 ? primary 'Mullapudi, V.' 8 0000-0002-5346-4242 primary 'Michalska, K.' 9 0000-0001-7140-3649 primary 'Fidelis, K.' 10 ? primary 'Fushman, D.' 11 ? primary 'Joachimiak, A.' 12 0000-0003-2535-6209 primary 'Joachimiak, L.A.' 13 0000-0003-3061-5850 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 93.370 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7S6O _cell.details ? _cell.formula_units_Z ? _cell.length_a 23.804 _cell.length_a_esd ? _cell.length_b 56.577 _cell.length_b_esd ? _cell.length_c 46.201 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7S6O _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Ubiquitin 8604.845 1 ? K48R ? ;GLY76 of chain A is connected by the isopeptide bond to epsilon amino group of LYS48 of chain B. The isopeptide linkage was not resolved in the structure. ; 2 polymer man Ubiquitin 8691.918 1 ? 'Aspartic acid residue added to C terminus (D77)' ? ;GLY76 of chain A is connected by the isopeptide bond to epsilon amino group of LYS48 of chain B. The isopeptide linkage was not resolved in the structure. ; 3 non-polymer nat 'ACETATE ION' 59.044 2 ? ? ? ? 4 water nat water 18.015 141 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGRQLEDGRTLSDYNIQKESTLHLVLRLRGG MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGRQLEDGRTLSDYNIQKESTLHLVLRLRGG A ? 2 'polypeptide(L)' no no MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGD MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGD B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLN n 1 3 ILE n 1 4 PHE n 1 5 VAL n 1 6 LYS n 1 7 THR n 1 8 LEU n 1 9 THR n 1 10 GLY n 1 11 LYS n 1 12 THR n 1 13 ILE n 1 14 THR n 1 15 LEU n 1 16 GLU n 1 17 VAL n 1 18 GLU n 1 19 PRO n 1 20 SER n 1 21 ASP n 1 22 THR n 1 23 ILE n 1 24 GLU n 1 25 ASN n 1 26 VAL n 1 27 LYS n 1 28 ALA n 1 29 LYS n 1 30 ILE n 1 31 GLN n 1 32 ASP n 1 33 LYS n 1 34 GLU n 1 35 GLY n 1 36 ILE n 1 37 PRO n 1 38 PRO n 1 39 ASP n 1 40 GLN n 1 41 GLN n 1 42 ARG n 1 43 LEU n 1 44 ILE n 1 45 PHE n 1 46 ALA n 1 47 GLY n 1 48 ARG n 1 49 GLN n 1 50 LEU n 1 51 GLU n 1 52 ASP n 1 53 GLY n 1 54 ARG n 1 55 THR n 1 56 LEU n 1 57 SER n 1 58 ASP n 1 59 TYR n 1 60 ASN n 1 61 ILE n 1 62 GLN n 1 63 LYS n 1 64 GLU n 1 65 SER n 1 66 THR n 1 67 LEU n 1 68 HIS n 1 69 LEU n 1 70 VAL n 1 71 LEU n 1 72 ARG n 1 73 LEU n 1 74 ARG n 1 75 GLY n 1 76 GLY n 2 1 MET n 2 2 GLN n 2 3 ILE n 2 4 PHE n 2 5 VAL n 2 6 LYS n 2 7 THR n 2 8 LEU n 2 9 THR n 2 10 GLY n 2 11 LYS n 2 12 THR n 2 13 ILE n 2 14 THR n 2 15 LEU n 2 16 GLU n 2 17 VAL n 2 18 GLU n 2 19 PRO n 2 20 SER n 2 21 ASP n 2 22 THR n 2 23 ILE n 2 24 GLU n 2 25 ASN n 2 26 VAL n 2 27 LYS n 2 28 ALA n 2 29 LYS n 2 30 ILE n 2 31 GLN n 2 32 ASP n 2 33 LYS n 2 34 GLU n 2 35 GLY n 2 36 ILE n 2 37 PRO n 2 38 PRO n 2 39 ASP n 2 40 GLN n 2 41 GLN n 2 42 ARG n 2 43 LEU n 2 44 ILE n 2 45 PHE n 2 46 ALA n 2 47 GLY n 2 48 LYS n 2 49 GLN n 2 50 LEU n 2 51 GLU n 2 52 ASP n 2 53 GLY n 2 54 ARG n 2 55 THR n 2 56 LEU n 2 57 SER n 2 58 ASP n 2 59 TYR n 2 60 ASN n 2 61 ILE n 2 62 GLN n 2 63 LYS n 2 64 GLU n 2 65 SER n 2 66 THR n 2 67 LEU n 2 68 HIS n 2 69 LEU n 2 70 VAL n 2 71 LEU n 2 72 ARG n 2 73 LEU n 2 74 ARG n 2 75 GLY n 2 76 GLY n 2 77 ASP n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 76 human ? UBB ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21' 511693 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 77 human ? UBB ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21' 511693 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP UBB_HUMAN P0CG47 ? 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 1 2 UNP UBB_HUMAN P0CG47 ? 2 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7S6O A 1 ? 76 ? P0CG47 1 ? 76 ? 1 76 2 2 7S6O B 1 ? 76 ? P0CG47 1 ? 76 ? 1 76 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7S6O ARG A 48 ? UNP P0CG47 LYS 48 'engineered mutation' 48 1 2 7S6O ASP B 77 ? UNP P0CG47 ? ? insertion 77 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7S6O _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.80 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 31.50 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.8 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '50 mM acetate, 8.6% PEG2000 MME, 17.1% PEG400' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 X 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-06-15 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9792 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 7S6O _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.250 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 28558 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 84.700 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.200 _reflns.pdbx_Rmerge_I_obs 0.072 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.900 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.671 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.086 _reflns.pdbx_Rpim_I_all 0.046 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 91217 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 1.250 1.270 ? ? ? ? ? ? 576 34.900 ? ? ? ? 0.497 ? ? ? ? ? ? ? ? 2.100 ? 1.107 ? ? 0.656 0.424 ? 1 1 0.624 ? ? ? ? ? ? ? ? ? ? 1.270 1.290 ? ? ? ? ? ? 714 43.000 ? ? ? ? 0.473 ? ? ? ? ? ? ? ? 2.200 ? 1.051 ? ? 0.613 0.386 ? 2 1 0.627 ? ? ? ? ? ? ? ? ? ? 1.290 1.320 ? ? ? ? ? ? 898 52.600 ? ? ? ? 0.450 ? ? ? ? ? ? ? ? 2.400 ? 0.924 ? ? 0.576 0.355 ? 3 1 0.706 ? ? ? ? ? ? ? ? ? ? 1.320 1.350 ? ? ? ? ? ? 982 60.200 ? ? ? ? 0.422 ? ? ? ? ? ? ? ? 2.500 ? 1.072 ? ? 0.537 0.326 ? 4 1 0.709 ? ? ? ? ? ? ? ? ? ? 1.350 1.380 ? ? ? ? ? ? 1229 72.800 ? ? ? ? 0.360 ? ? ? ? ? ? ? ? 2.700 ? 1.058 ? ? 0.453 0.271 ? 5 1 0.828 ? ? ? ? ? ? ? ? ? ? 1.380 1.410 ? ? ? ? ? ? 1555 90.700 ? ? ? ? 0.339 ? ? ? ? ? ? ? ? 3.000 ? 1.154 ? ? 0.413 0.232 ? 6 1 0.858 ? ? ? ? ? ? ? ? ? ? 1.410 1.440 ? ? ? ? ? ? 1565 94.500 ? ? ? ? 0.286 ? ? ? ? ? ? ? ? 3.200 ? 1.286 ? ? 0.341 0.185 ? 7 1 0.907 ? ? ? ? ? ? ? ? ? ? 1.440 1.480 ? ? ? ? ? ? 1595 93.900 ? ? ? ? 0.256 ? ? ? ? ? ? ? ? 3.200 ? 1.377 ? ? 0.306 0.165 ? 8 1 0.908 ? ? ? ? ? ? ? ? ? ? 1.480 1.530 ? ? ? ? ? ? 1582 95.100 ? ? ? ? 0.197 ? ? ? ? ? ? ? ? 3.300 ? 1.605 ? ? 0.235 0.127 ? 9 1 0.953 ? ? ? ? ? ? ? ? ? ? 1.530 1.570 ? ? ? ? ? ? 1560 92.400 ? ? ? ? 0.172 ? ? ? ? ? ? ? ? 3.200 ? 1.746 ? ? 0.206 0.113 ? 10 1 0.952 ? ? ? ? ? ? ? ? ? ? 1.570 1.630 ? ? ? ? ? ? 1581 95.400 ? ? ? ? 0.150 ? ? ? ? ? ? ? ? 3.500 ? 1.757 ? ? 0.177 0.093 ? 11 1 0.967 ? ? ? ? ? ? ? ? ? ? 1.630 1.700 ? ? ? ? ? ? 1666 96.100 ? ? ? ? 0.137 ? ? ? ? ? ? ? ? 3.500 ? 1.891 ? ? 0.162 0.085 ? 12 1 0.973 ? ? ? ? ? ? ? ? ? ? 1.700 1.770 ? ? ? ? ? ? 1599 96.800 ? ? ? ? 0.124 ? ? ? ? ? ? ? ? 3.400 ? 1.904 ? ? 0.148 0.079 ? 13 1 0.974 ? ? ? ? ? ? ? ? ? ? 1.770 1.870 ? ? ? ? ? ? 1572 93.700 ? ? ? ? 0.102 ? ? ? ? ? ? ? ? 3.200 ? 1.935 ? ? 0.122 0.066 ? 14 1 0.978 ? ? ? ? ? ? ? ? ? ? 1.870 1.980 ? ? ? ? ? ? 1649 96.700 ? ? ? ? 0.092 ? ? ? ? ? ? ? ? 3.500 ? 1.914 ? ? 0.108 0.056 ? 15 1 0.985 ? ? ? ? ? ? ? ? ? ? 1.980 2.140 ? ? ? ? ? ? 1639 96.900 ? ? ? ? 0.086 ? ? ? ? ? ? ? ? 3.500 ? 1.877 ? ? 0.101 0.053 ? 16 1 0.987 ? ? ? ? ? ? ? ? ? ? 2.140 2.350 ? ? ? ? ? ? 1632 95.800 ? ? ? ? 0.078 ? ? ? ? ? ? ? ? 3.300 ? 1.836 ? ? 0.094 0.051 ? 17 1 0.987 ? ? ? ? ? ? ? ? ? ? 2.350 2.690 ? ? ? ? ? ? 1641 97.200 ? ? ? ? 0.075 ? ? ? ? ? ? ? ? 3.500 ? 1.920 ? ? 0.088 0.046 ? 18 1 0.988 ? ? ? ? ? ? ? ? ? ? 2.690 3.390 ? ? ? ? ? ? 1658 97.100 ? ? ? ? 0.064 ? ? ? ? ? ? ? ? 3.400 ? 1.894 ? ? 0.076 0.041 ? 19 1 0.990 ? ? ? ? ? ? ? ? ? ? 3.390 50.000 ? ? ? ? ? ? 1665 96.200 ? ? ? ? 0.056 ? ? ? ? ? ? ? ? 3.500 ? 1.784 ? ? 0.066 0.035 ? 20 1 0.991 ? ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] 0.4000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0700 _refine.aniso_B[2][2] -1.0700 _refine.aniso_B[2][3] -0.0000 _refine.aniso_B[3][3] 0.6600 _refine.B_iso_max 50.220 _refine.B_iso_mean 17.6080 _refine.B_iso_min 9.170 _refine.correlation_coeff_Fo_to_Fc 0.9820 _refine.correlation_coeff_Fo_to_Fc_free 0.9660 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7S6O _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.2500 _refine.ls_d_res_low 46.1200 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 27176 _refine.ls_number_reflns_R_free 1363 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 84.4000 _refine.ls_percent_reflns_R_free 4.8000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1313 _refine.ls_R_factor_R_free 0.1755 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1292 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 5E6J' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.0550 _refine.pdbx_overall_ESU_R_Free 0.0540 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 1.9220 _refine.overall_SU_ML 0.0360 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 1.2500 _refine_hist.d_res_low 46.1200 _refine_hist.number_atoms_solvent 141 _refine_hist.number_atoms_total 1330 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 148 _refine_hist.pdbx_B_iso_mean_ligand 32.77 _refine_hist.pdbx_B_iso_mean_solvent 33.38 _refine_hist.pdbx_number_atoms_protein 1181 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 0.013 1319 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.015 1382 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.581 1.658 1800 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.332 1.593 3212 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 7.275 5.000 178 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 29.895 23.239 71 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 13.847 15.000 287 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 12.059 15.000 10 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.080 0.200 190 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.020 1478 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 278 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 1.434 3.000 2701 ? r_rigid_bond_restr ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.2500 _refine_ls_shell.d_res_low 1.2830 _refine_ls_shell.number_reflns_all 863 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 44 _refine_ls_shell.number_reflns_R_work 819 _refine_ls_shell.percent_reflns_obs 35.1000 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3810 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2690 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 7S6O _struct.title 'The crystal structure of Lys48-linked di-ubiquitin' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7S6O _struct_keywords.text 'ubiquitin, di-ubiquitin, signaling protein' _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 22 ? GLY A 35 ? THR A 22 GLY A 35 1 ? 14 HELX_P HELX_P2 AA2 PRO A 37 ? ASP A 39 ? PRO A 37 ASP A 39 5 ? 3 HELX_P HELX_P3 AA3 LEU A 56 ? ASN A 60 ? LEU A 56 ASN A 60 5 ? 5 HELX_P HELX_P4 AA4 THR B 22 ? GLY B 35 ? THR B 22 GLY B 35 1 ? 14 HELX_P HELX_P5 AA5 PRO B 37 ? ASP B 39 ? PRO B 37 ASP B 39 5 ? 3 HELX_P HELX_P6 AA6 THR B 55 ? ASN B 60 ? THR B 55 ASN B 60 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 12 ? GLU A 16 ? THR A 12 GLU A 16 AA1 2 GLN A 2 ? LYS A 6 ? GLN A 2 LYS A 6 AA1 3 THR A 66 ? LEU A 71 ? THR A 66 LEU A 71 AA1 4 GLN A 41 ? PHE A 45 ? GLN A 41 PHE A 45 AA1 5 ARG A 48 ? GLN A 49 ? ARG A 48 GLN A 49 AA2 1 THR B 12 ? GLU B 16 ? THR B 12 GLU B 16 AA2 2 GLN B 2 ? LYS B 6 ? GLN B 2 LYS B 6 AA2 3 THR B 66 ? LEU B 71 ? THR B 66 LEU B 71 AA2 4 GLN B 41 ? PHE B 45 ? GLN B 41 PHE B 45 AA2 5 LYS B 48 ? GLN B 49 ? LYS B 48 GLN B 49 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LEU A 15 ? O LEU A 15 N ILE A 3 ? N ILE A 3 AA1 2 3 N PHE A 4 ? N PHE A 4 O LEU A 67 ? O LEU A 67 AA1 3 4 O VAL A 70 ? O VAL A 70 N ARG A 42 ? N ARG A 42 AA1 4 5 N PHE A 45 ? N PHE A 45 O ARG A 48 ? O ARG A 48 AA2 1 2 O LEU B 15 ? O LEU B 15 N ILE B 3 ? N ILE B 3 AA2 2 3 N PHE B 4 ? N PHE B 4 O LEU B 67 ? O LEU B 67 AA2 3 4 O VAL B 70 ? O VAL B 70 N ARG B 42 ? N ARG B 42 AA2 4 5 N PHE B 45 ? N PHE B 45 O LYS B 48 ? O LYS B 48 # _atom_sites.entry_id 7S6O _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.042010 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002472 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017675 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021682 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 HIS 68 68 68 HIS HIS A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 ARG 74 74 ? ? ? A . n A 1 75 GLY 75 75 ? ? ? A . n A 1 76 GLY 76 76 ? ? ? A . n B 2 1 MET 1 1 1 MET MET B . n B 2 2 GLN 2 2 2 GLN GLN B . n B 2 3 ILE 3 3 3 ILE ILE B . n B 2 4 PHE 4 4 4 PHE PHE B . n B 2 5 VAL 5 5 5 VAL VAL B . n B 2 6 LYS 6 6 6 LYS LYS B . n B 2 7 THR 7 7 7 THR THR B . n B 2 8 LEU 8 8 8 LEU LEU B . n B 2 9 THR 9 9 9 THR THR B . n B 2 10 GLY 10 10 10 GLY GLY B . n B 2 11 LYS 11 11 11 LYS LYS B . n B 2 12 THR 12 12 12 THR THR B . n B 2 13 ILE 13 13 13 ILE ILE B . n B 2 14 THR 14 14 14 THR THR B . n B 2 15 LEU 15 15 15 LEU LEU B . n B 2 16 GLU 16 16 16 GLU GLU B . n B 2 17 VAL 17 17 17 VAL VAL B . n B 2 18 GLU 18 18 18 GLU GLU B . n B 2 19 PRO 19 19 19 PRO PRO B . n B 2 20 SER 20 20 20 SER SER B . n B 2 21 ASP 21 21 21 ASP ASP B . n B 2 22 THR 22 22 22 THR THR B . n B 2 23 ILE 23 23 23 ILE ILE B . n B 2 24 GLU 24 24 24 GLU GLU B . n B 2 25 ASN 25 25 25 ASN ASN B . n B 2 26 VAL 26 26 26 VAL VAL B . n B 2 27 LYS 27 27 27 LYS LYS B . n B 2 28 ALA 28 28 28 ALA ALA B . n B 2 29 LYS 29 29 29 LYS LYS B . n B 2 30 ILE 30 30 30 ILE ILE B . n B 2 31 GLN 31 31 31 GLN GLN B . n B 2 32 ASP 32 32 32 ASP ASP B . n B 2 33 LYS 33 33 33 LYS LYS B . n B 2 34 GLU 34 34 34 GLU GLU B . n B 2 35 GLY 35 35 35 GLY GLY B . n B 2 36 ILE 36 36 36 ILE ILE B . n B 2 37 PRO 37 37 37 PRO PRO B . n B 2 38 PRO 38 38 38 PRO PRO B . n B 2 39 ASP 39 39 39 ASP ASP B . n B 2 40 GLN 40 40 40 GLN GLN B . n B 2 41 GLN 41 41 41 GLN GLN B . n B 2 42 ARG 42 42 42 ARG ARG B . n B 2 43 LEU 43 43 43 LEU LEU B . n B 2 44 ILE 44 44 44 ILE ILE B . n B 2 45 PHE 45 45 45 PHE PHE B . n B 2 46 ALA 46 46 46 ALA ALA B . n B 2 47 GLY 47 47 47 GLY GLY B . n B 2 48 LYS 48 48 48 LYS LYS B . n B 2 49 GLN 49 49 49 GLN GLN B . n B 2 50 LEU 50 50 50 LEU LEU B . n B 2 51 GLU 51 51 51 GLU GLU B . n B 2 52 ASP 52 52 52 ASP ASP B . n B 2 53 GLY 53 53 53 GLY GLY B . n B 2 54 ARG 54 54 54 ARG ARG B . n B 2 55 THR 55 55 55 THR THR B . n B 2 56 LEU 56 56 56 LEU LEU B . n B 2 57 SER 57 57 57 SER SER B . n B 2 58 ASP 58 58 58 ASP ASP B . n B 2 59 TYR 59 59 59 TYR TYR B . n B 2 60 ASN 60 60 60 ASN ASN B . n B 2 61 ILE 61 61 61 ILE ILE B . n B 2 62 GLN 62 62 62 GLN GLN B . n B 2 63 LYS 63 63 63 LYS LYS B . n B 2 64 GLU 64 64 64 GLU GLU B . n B 2 65 SER 65 65 65 SER SER B . n B 2 66 THR 66 66 66 THR THR B . n B 2 67 LEU 67 67 67 LEU LEU B . n B 2 68 HIS 68 68 68 HIS HIS B . n B 2 69 LEU 69 69 69 LEU LEU B . n B 2 70 VAL 70 70 70 VAL VAL B . n B 2 71 LEU 71 71 71 LEU LEU B . n B 2 72 ARG 72 72 72 ARG ARG B . n B 2 73 LEU 73 73 73 LEU LEU B . n B 2 74 ARG 74 74 74 ARG ARG B . n B 2 75 GLY 75 75 75 GLY GLY B . n B 2 76 GLY 76 76 ? ? ? B . n B 2 77 ASP 77 77 ? ? ? B . n # _pdbx_contact_author.id 1 _pdbx_contact_author.email andrzejj@anl.gov _pdbx_contact_author.name_first Andrzej _pdbx_contact_author.name_last Joachimiak _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-2535-6209 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ACT 1 501 501 ACT ACT B . D 3 ACT 1 502 502 ACT ACT B . E 4 HOH 1 101 131 HOH HOH A . E 4 HOH 2 102 1 HOH HOH A . E 4 HOH 3 103 3 HOH HOH A . E 4 HOH 4 104 2 HOH HOH A . E 4 HOH 5 105 4 HOH HOH A . E 4 HOH 6 106 5 HOH HOH A . E 4 HOH 7 107 6 HOH HOH A . E 4 HOH 8 108 8 HOH HOH A . E 4 HOH 9 109 7 HOH HOH A . E 4 HOH 10 110 138 HOH HOH A . E 4 HOH 11 111 13 HOH HOH A . E 4 HOH 12 112 136 HOH HOH A . E 4 HOH 13 113 10 HOH HOH A . E 4 HOH 14 114 9 HOH HOH A . E 4 HOH 15 115 12 HOH HOH A . E 4 HOH 16 116 11 HOH HOH A . E 4 HOH 17 117 16 HOH HOH A . E 4 HOH 18 118 140 HOH HOH A . E 4 HOH 19 119 19 HOH HOH A . E 4 HOH 20 120 14 HOH HOH A . E 4 HOH 21 121 18 HOH HOH A . E 4 HOH 22 122 15 HOH HOH A . E 4 HOH 23 123 22 HOH HOH A . E 4 HOH 24 124 21 HOH HOH A . E 4 HOH 25 125 24 HOH HOH A . E 4 HOH 26 126 27 HOH HOH A . E 4 HOH 27 127 25 HOH HOH A . E 4 HOH 28 128 17 HOH HOH A . E 4 HOH 29 129 31 HOH HOH A . E 4 HOH 30 130 34 HOH HOH A . E 4 HOH 31 131 29 HOH HOH A . E 4 HOH 32 132 26 HOH HOH A . E 4 HOH 33 133 23 HOH HOH A . E 4 HOH 34 134 28 HOH HOH A . E 4 HOH 35 135 35 HOH HOH A . E 4 HOH 36 136 32 HOH HOH A . E 4 HOH 37 137 36 HOH HOH A . E 4 HOH 38 138 38 HOH HOH A . E 4 HOH 39 139 33 HOH HOH A . E 4 HOH 40 140 20 HOH HOH A . E 4 HOH 41 141 30 HOH HOH A . E 4 HOH 42 142 37 HOH HOH A . E 4 HOH 43 143 39 HOH HOH A . E 4 HOH 44 144 41 HOH HOH A . E 4 HOH 45 145 44 HOH HOH A . E 4 HOH 46 146 40 HOH HOH A . E 4 HOH 47 147 108 HOH HOH A . E 4 HOH 48 148 43 HOH HOH A . E 4 HOH 49 149 42 HOH HOH A . E 4 HOH 50 150 47 HOH HOH A . E 4 HOH 51 151 139 HOH HOH A . E 4 HOH 52 152 48 HOH HOH A . E 4 HOH 53 153 45 HOH HOH A . E 4 HOH 54 154 51 HOH HOH A . E 4 HOH 55 155 46 HOH HOH A . E 4 HOH 56 156 49 HOH HOH A . E 4 HOH 57 157 50 HOH HOH A . E 4 HOH 58 158 52 HOH HOH A . E 4 HOH 59 159 53 HOH HOH A . E 4 HOH 60 160 54 HOH HOH A . E 4 HOH 61 161 55 HOH HOH A . E 4 HOH 62 162 56 HOH HOH A . E 4 HOH 63 163 57 HOH HOH A . E 4 HOH 64 164 137 HOH HOH A . E 4 HOH 65 165 58 HOH HOH A . E 4 HOH 66 166 59 HOH HOH A . E 4 HOH 67 167 60 HOH HOH A . E 4 HOH 68 168 61 HOH HOH A . E 4 HOH 69 169 130 HOH HOH A . E 4 HOH 70 170 125 HOH HOH A . F 4 HOH 1 601 64 HOH HOH B . F 4 HOH 2 602 62 HOH HOH B . F 4 HOH 3 603 63 HOH HOH B . F 4 HOH 4 604 66 HOH HOH B . F 4 HOH 5 605 134 HOH HOH B . F 4 HOH 6 606 65 HOH HOH B . F 4 HOH 7 607 124 HOH HOH B . F 4 HOH 8 608 68 HOH HOH B . F 4 HOH 9 609 69 HOH HOH B . F 4 HOH 10 610 123 HOH HOH B . F 4 HOH 11 611 129 HOH HOH B . F 4 HOH 12 612 71 HOH HOH B . F 4 HOH 13 613 72 HOH HOH B . F 4 HOH 14 614 67 HOH HOH B . F 4 HOH 15 615 74 HOH HOH B . F 4 HOH 16 616 141 HOH HOH B . F 4 HOH 17 617 70 HOH HOH B . F 4 HOH 18 618 73 HOH HOH B . F 4 HOH 19 619 76 HOH HOH B . F 4 HOH 20 620 78 HOH HOH B . F 4 HOH 21 621 75 HOH HOH B . F 4 HOH 22 622 133 HOH HOH B . F 4 HOH 23 623 77 HOH HOH B . F 4 HOH 24 624 80 HOH HOH B . F 4 HOH 25 625 81 HOH HOH B . F 4 HOH 26 626 79 HOH HOH B . F 4 HOH 27 627 85 HOH HOH B . F 4 HOH 28 628 83 HOH HOH B . F 4 HOH 29 629 87 HOH HOH B . F 4 HOH 30 630 86 HOH HOH B . F 4 HOH 31 631 89 HOH HOH B . F 4 HOH 32 632 82 HOH HOH B . F 4 HOH 33 633 84 HOH HOH B . F 4 HOH 34 634 90 HOH HOH B . F 4 HOH 35 635 91 HOH HOH B . F 4 HOH 36 636 92 HOH HOH B . F 4 HOH 37 637 88 HOH HOH B . F 4 HOH 38 638 93 HOH HOH B . F 4 HOH 39 639 95 HOH HOH B . F 4 HOH 40 640 99 HOH HOH B . F 4 HOH 41 641 96 HOH HOH B . F 4 HOH 42 642 98 HOH HOH B . F 4 HOH 43 643 101 HOH HOH B . F 4 HOH 44 644 100 HOH HOH B . F 4 HOH 45 645 102 HOH HOH B . F 4 HOH 46 646 128 HOH HOH B . F 4 HOH 47 647 103 HOH HOH B . F 4 HOH 48 648 97 HOH HOH B . F 4 HOH 49 649 104 HOH HOH B . F 4 HOH 50 650 122 HOH HOH B . F 4 HOH 51 651 106 HOH HOH B . F 4 HOH 52 652 126 HOH HOH B . F 4 HOH 53 653 105 HOH HOH B . F 4 HOH 54 654 107 HOH HOH B . F 4 HOH 55 655 94 HOH HOH B . F 4 HOH 56 656 109 HOH HOH B . F 4 HOH 57 657 115 HOH HOH B . F 4 HOH 58 658 110 HOH HOH B . F 4 HOH 59 659 111 HOH HOH B . F 4 HOH 60 660 112 HOH HOH B . F 4 HOH 61 661 113 HOH HOH B . F 4 HOH 62 662 114 HOH HOH B . F 4 HOH 63 663 116 HOH HOH B . F 4 HOH 64 664 117 HOH HOH B . F 4 HOH 65 665 132 HOH HOH B . F 4 HOH 66 666 127 HOH HOH B . F 4 HOH 67 667 119 HOH HOH B . F 4 HOH 68 668 118 HOH HOH B . F 4 HOH 69 669 120 HOH HOH B . F 4 HOH 70 670 135 HOH HOH B . F 4 HOH 71 671 121 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1220 ? 1 MORE 2 ? 1 'SSA (A^2)' 8000 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-09-22 2 'Structure model' 1 1 2021-12-15 3 'Structure model' 2 0 2022-03-16 4 'Structure model' 2 1 2023-05-31 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' author 'Coordinate replacement' 'Model orientation/position' ;The previous deposition based on small differences in electron density maps and had wrong assignment of chains due to invisibility of linker between molecules. We were informed about similar structure at lower resolution which had visible linker. The swap of chains was necessary to get proper chain order. ; # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 2 'Structure model' 'Structure summary' 3 3 'Structure model' Advisory 4 3 'Structure model' 'Atomic model' 5 3 'Structure model' 'Author supporting evidence' 6 3 'Structure model' 'Data collection' 7 3 'Structure model' 'Database references' 8 3 'Structure model' 'Derived calculations' 9 3 'Structure model' 'Non-polymer description' 10 3 'Structure model' 'Polymer sequence' 11 3 'Structure model' 'Refinement description' 12 3 'Structure model' 'Source and taxonomy' 13 3 'Structure model' 'Structure summary' 14 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' audit_author 2 2 'Structure model' pdbx_audit_support 3 2 'Structure model' struct_keywords 4 3 'Structure model' atom_site 5 3 'Structure model' atom_site_anisotrop 6 3 'Structure model' chem_comp 7 3 'Structure model' entity 8 3 'Structure model' entity_poly 9 3 'Structure model' entity_poly_seq 10 3 'Structure model' entity_src_gen 11 3 'Structure model' pdbx_audit_support 12 3 'Structure model' pdbx_contact_author 13 3 'Structure model' pdbx_database_related 14 3 'Structure model' pdbx_entity_nonpoly 15 3 'Structure model' pdbx_entry_details 16 3 'Structure model' pdbx_nonpoly_scheme 17 3 'Structure model' pdbx_poly_seq_scheme 18 3 'Structure model' pdbx_struct_assembly 19 3 'Structure model' pdbx_struct_assembly_gen 20 3 'Structure model' pdbx_struct_assembly_prop 21 3 'Structure model' pdbx_struct_sheet_hbond 22 3 'Structure model' pdbx_unobs_or_zero_occ_residues 23 3 'Structure model' pdbx_validate_close_contact 24 3 'Structure model' refine 25 3 'Structure model' refine_hist 26 3 'Structure model' refine_ls_restr 27 3 'Structure model' refine_ls_shell 28 3 'Structure model' reflns 29 3 'Structure model' reflns_shell 30 3 'Structure model' software 31 3 'Structure model' struct_asym 32 3 'Structure model' struct_conf 33 3 'Structure model' struct_ref_seq_dif 34 3 'Structure model' struct_sheet_range 35 4 'Structure model' citation 36 4 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_struct_keywords.text' 2 3 'Structure model' '_chem_comp.formula' 3 3 'Structure model' '_chem_comp.formula_weight' 4 3 'Structure model' '_chem_comp.id' 5 3 'Structure model' '_chem_comp.mon_nstd_flag' 6 3 'Structure model' '_chem_comp.name' 7 3 'Structure model' '_chem_comp.type' 8 3 'Structure model' '_entity_poly.pdbx_seq_one_letter_code' 9 3 'Structure model' '_entity_poly.pdbx_seq_one_letter_code_can' 10 3 'Structure model' '_entity_poly_seq.entity_id' 11 3 'Structure model' '_entity_poly_seq.mon_id' 12 3 'Structure model' '_entity_poly_seq.num' 13 3 'Structure model' '_entity_src_gen.gene_src_common_name' 14 3 'Structure model' '_entity_src_gen.pdbx_end_seq_num' 15 3 'Structure model' '_pdbx_poly_seq_scheme.asym_id' 16 3 'Structure model' '_pdbx_poly_seq_scheme.auth_mon_id' 17 3 'Structure model' '_pdbx_poly_seq_scheme.auth_seq_num' 18 3 'Structure model' '_pdbx_poly_seq_scheme.entity_id' 19 3 'Structure model' '_pdbx_poly_seq_scheme.mon_id' 20 3 'Structure model' '_pdbx_poly_seq_scheme.ndb_seq_num' 21 3 'Structure model' '_pdbx_poly_seq_scheme.pdb_mon_id' 22 3 'Structure model' '_pdbx_poly_seq_scheme.pdb_seq_num' 23 3 'Structure model' '_pdbx_poly_seq_scheme.pdb_strand_id' 24 3 'Structure model' '_pdbx_poly_seq_scheme.seq_id' 25 3 'Structure model' '_pdbx_struct_assembly.details' 26 3 'Structure model' '_pdbx_struct_assembly.method_details' 27 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 28 3 'Structure model' '_pdbx_struct_assembly_prop.value' 29 3 'Structure model' '_pdbx_struct_sheet_hbond.range_1_auth_comp_id' 30 3 'Structure model' '_pdbx_struct_sheet_hbond.range_1_auth_seq_id' 31 3 'Structure model' '_pdbx_struct_sheet_hbond.range_1_label_comp_id' 32 3 'Structure model' '_pdbx_struct_sheet_hbond.range_1_label_seq_id' 33 3 'Structure model' '_pdbx_struct_sheet_hbond.range_2_auth_comp_id' 34 3 'Structure model' '_pdbx_struct_sheet_hbond.range_2_auth_seq_id' 35 3 'Structure model' '_pdbx_struct_sheet_hbond.range_2_label_comp_id' 36 3 'Structure model' '_pdbx_struct_sheet_hbond.range_2_label_seq_id' 37 3 'Structure model' '_pdbx_unobs_or_zero_occ_residues.auth_asym_id' 38 3 'Structure model' '_pdbx_unobs_or_zero_occ_residues.auth_comp_id' 39 3 'Structure model' '_pdbx_unobs_or_zero_occ_residues.auth_seq_id' 40 3 'Structure model' '_pdbx_unobs_or_zero_occ_residues.label_asym_id' 41 3 'Structure model' '_pdbx_unobs_or_zero_occ_residues.label_comp_id' 42 3 'Structure model' '_pdbx_unobs_or_zero_occ_residues.label_seq_id' 43 3 'Structure model' '_refine.B_iso_max' 44 3 'Structure model' '_refine.B_iso_mean' 45 3 'Structure model' '_refine.B_iso_min' 46 3 'Structure model' '_refine.aniso_B[1][1]' 47 3 'Structure model' '_refine.aniso_B[1][3]' 48 3 'Structure model' '_refine.aniso_B[2][2]' 49 3 'Structure model' '_refine.aniso_B[2][3]' 50 3 'Structure model' '_refine.aniso_B[3][3]' 51 3 'Structure model' '_refine.correlation_coeff_Fo_to_Fc' 52 3 'Structure model' '_refine.correlation_coeff_Fo_to_Fc_free' 53 3 'Structure model' '_refine.ls_R_factor_R_free' 54 3 'Structure model' '_refine.ls_R_factor_R_work' 55 3 'Structure model' '_refine.ls_R_factor_obs' 56 3 'Structure model' '_refine.overall_SU_B' 57 3 'Structure model' '_refine.overall_SU_ML' 58 3 'Structure model' '_refine.pdbx_overall_ESU_R' 59 3 'Structure model' '_refine.pdbx_overall_ESU_R_Free' 60 3 'Structure model' '_refine_hist.number_atoms_solvent' 61 3 'Structure model' '_refine_hist.number_atoms_total' 62 3 'Structure model' '_refine_hist.pdbx_B_iso_mean_ligand' 63 3 'Structure model' '_refine_hist.pdbx_B_iso_mean_solvent' 64 3 'Structure model' '_refine_hist.pdbx_number_atoms_ligand' 65 3 'Structure model' '_refine_ls_restr.dev_ideal' 66 3 'Structure model' '_refine_ls_restr.dev_ideal_target' 67 3 'Structure model' '_refine_ls_restr.number' 68 3 'Structure model' '_refine_ls_shell.R_factor_R_free' 69 3 'Structure model' '_refine_ls_shell.R_factor_R_work' 70 3 'Structure model' '_reflns.d_resolution_low' 71 3 'Structure model' '_reflns.pdbx_CC_half' 72 3 'Structure model' '_reflns.pdbx_CC_star' 73 3 'Structure model' '_reflns.pdbx_netI_over_av_sigmaI' 74 3 'Structure model' '_reflns.pdbx_number_measured_all' 75 3 'Structure model' '_reflns_shell.d_res_low' 76 3 'Structure model' '_reflns_shell.meanI_over_sigI_obs' 77 3 'Structure model' '_reflns_shell.pdbx_CC_star' 78 3 'Structure model' '_software.classification' 79 3 'Structure model' '_software.name' 80 3 'Structure model' '_software.version' 81 3 'Structure model' '_struct_conf.beg_auth_comp_id' 82 3 'Structure model' '_struct_conf.beg_auth_seq_id' 83 3 'Structure model' '_struct_conf.beg_label_comp_id' 84 3 'Structure model' '_struct_conf.beg_label_seq_id' 85 3 'Structure model' '_struct_conf.pdbx_PDB_helix_length' 86 3 'Structure model' '_struct_ref_seq_dif.db_mon_id' 87 3 'Structure model' '_struct_ref_seq_dif.details' 88 3 'Structure model' '_struct_ref_seq_dif.mon_id' 89 3 'Structure model' '_struct_ref_seq_dif.pdbx_auth_seq_num' 90 3 'Structure model' '_struct_ref_seq_dif.pdbx_seq_db_seq_num' 91 3 'Structure model' '_struct_ref_seq_dif.seq_num' 92 3 'Structure model' '_struct_sheet_range.beg_auth_comp_id' 93 3 'Structure model' '_struct_sheet_range.beg_label_comp_id' 94 4 'Structure model' '_citation.country' 95 4 'Structure model' '_citation.journal_abbrev' 96 4 'Structure model' '_citation.journal_id_CSD' 97 4 'Structure model' '_citation.journal_id_ISSN' 98 4 'Structure model' '_citation.journal_volume' 99 4 'Structure model' '_citation.page_first' 100 4 'Structure model' '_citation.page_last' 101 4 'Structure model' '_citation.pdbx_database_id_DOI' 102 4 'Structure model' '_citation.pdbx_database_id_PubMed' 103 4 'Structure model' '_citation.title' 104 4 'Structure model' '_citation.year' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0267 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 5 # _pdbx_entry_details.entry_id 7S6O _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 631 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 648 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.10 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 74 ? A ARG 74 2 1 Y 1 A GLY 75 ? A GLY 75 3 1 Y 1 A GLY 76 ? A GLY 76 4 1 Y 1 B GLY 76 ? B GLY 76 5 1 Y 1 B ASP 77 ? B ASP 77 # _pdbx_audit_support.funding_organization 'Department of Energy (DOE, United States)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number DE-AC02-06CH11357 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ACETATE ION' ACT 4 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #