HEADER IMMUNE SYSTEM 22-SEP-21 7SAH TITLE CRYSTAL STRUCTURE OF LAG16 NANOBODY BOUND TO EGFP COMPND MOL_ID: 1; COMPND 2 MOLECULE: GREEN FLUORESCENT PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: LAG16; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEQUOREA VICTORIA; SOURCE 3 ORGANISM_COMMON: WATER JELLYFISH, MESONEMA VICTORIA; SOURCE 4 ORGANISM_TAXID: 6100; SOURCE 5 GENE: GFP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 10 ORGANISM_TAXID: 9844; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ANTIBODY, NANOBODY, AFFINITY TAG, FLUORESCENT PROTEIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.T.Q.CONG,M.J.SCHELLENBERG REVDAT 3 15-NOV-23 7SAH 1 ATOM REVDAT 2 18-OCT-23 7SAH 1 REMARK REVDAT 1 14-SEP-22 7SAH 0 JRNL AUTH A.T.Q.CONG,T.L.WITTER,M.J.SCHELLENBERG JRNL TITL HIGH-EFFICIENCY RECOMBINANT PROTEIN PURIFICATION USING JRNL TITL 2 MCHERRY AND YFP NANOBODY AFFINITY MATRICES. JRNL REF PROTEIN SCI. V. 31 E4383 2022 JRNL REFN ESSN 1469-896X JRNL PMID 36040252 JRNL DOI 10.1002/PRO.4383 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 58083 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.177 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.430 REMARK 3 FREE R VALUE TEST SET COUNT : 1992 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.1200 - 3.8600 1.00 4224 150 0.1414 0.1550 REMARK 3 2 3.8600 - 3.0600 1.00 4085 146 0.1363 0.1471 REMARK 3 3 3.0600 - 2.6700 1.00 4044 143 0.1507 0.1677 REMARK 3 4 2.6700 - 2.4300 1.00 4032 143 0.1480 0.1885 REMARK 3 5 2.4300 - 2.2600 1.00 4022 143 0.1512 0.1715 REMARK 3 6 2.2600 - 2.1200 1.00 4014 143 0.1549 0.1682 REMARK 3 7 2.1200 - 2.0200 1.00 4013 142 0.1616 0.2030 REMARK 3 8 2.0200 - 1.9300 1.00 3969 141 0.1714 0.2124 REMARK 3 9 1.9300 - 1.8500 1.00 4014 142 0.1720 0.2063 REMARK 3 10 1.8500 - 1.7900 1.00 3990 142 0.1865 0.2024 REMARK 3 11 1.7900 - 1.7300 1.00 3977 141 0.2108 0.2657 REMARK 3 12 1.7300 - 1.6800 1.00 3988 142 0.2275 0.2484 REMARK 3 13 1.6800 - 1.6400 1.00 3955 140 0.2635 0.3054 REMARK 3 14 1.6400 - 1.6000 0.95 3764 134 0.3100 0.3184 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.580 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.17 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.3300 12.3639 15.6453 REMARK 3 T TENSOR REMARK 3 T11: 0.1924 T22: 0.1558 REMARK 3 T33: 0.1067 T12: 0.0229 REMARK 3 T13: -0.0444 T23: 0.0297 REMARK 3 L TENSOR REMARK 3 L11: 7.2349 L22: 6.3658 REMARK 3 L33: 2.1867 L12: 4.8588 REMARK 3 L13: 1.2688 L23: 0.8293 REMARK 3 S TENSOR REMARK 3 S11: -0.1228 S12: 0.0801 S13: 0.1604 REMARK 3 S21: -0.0630 S22: 0.0024 S23: 0.0719 REMARK 3 S31: -0.2285 S32: -0.0263 S33: 0.1545 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 147 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.3326 4.2231 17.6689 REMARK 3 T TENSOR REMARK 3 T11: 0.1364 T22: 0.1417 REMARK 3 T33: 0.1431 T12: 0.0050 REMARK 3 T13: -0.0277 T23: 0.0049 REMARK 3 L TENSOR REMARK 3 L11: 1.0514 L22: 1.3717 REMARK 3 L33: 1.9476 L12: 0.0492 REMARK 3 L13: -0.0529 L23: -0.3618 REMARK 3 S TENSOR REMARK 3 S11: -0.0923 S12: -0.0498 S13: 0.0267 REMARK 3 S21: -0.0452 S22: -0.0409 S23: -0.0194 REMARK 3 S31: -0.0679 S32: -0.0464 S33: 0.1232 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 148 THROUGH 159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.9922 -2.2455 14.5226 REMARK 3 T TENSOR REMARK 3 T11: 0.2482 T22: 0.3738 REMARK 3 T33: 0.2613 T12: -0.0001 REMARK 3 T13: 0.0309 T23: 0.0323 REMARK 3 L TENSOR REMARK 3 L11: 3.3107 L22: 6.3285 REMARK 3 L33: 5.5239 L12: 2.6726 REMARK 3 L13: -4.2538 L23: -3.6809 REMARK 3 S TENSOR REMARK 3 S11: -0.4740 S12: 0.4843 S13: -0.3996 REMARK 3 S21: -0.8088 S22: 0.0296 S23: -0.6373 REMARK 3 S31: 0.9762 S32: 0.0386 S33: 0.4541 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 160 THROUGH 175 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.2248 -6.1757 23.3175 REMARK 3 T TENSOR REMARK 3 T11: 0.1632 T22: 0.1517 REMARK 3 T33: 0.1310 T12: -0.0159 REMARK 3 T13: -0.0347 T23: -0.0198 REMARK 3 L TENSOR REMARK 3 L11: 8.2060 L22: 7.5682 REMARK 3 L33: 6.6537 L12: 5.6808 REMARK 3 L13: -4.4883 L23: -5.1172 REMARK 3 S TENSOR REMARK 3 S11: -0.2530 S12: -0.0219 S13: -0.2974 REMARK 3 S21: 0.0062 S22: -0.0334 S23: 0.0941 REMARK 3 S31: 0.3259 S32: -0.1616 S33: 0.3532 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 176 THROUGH 231 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.2367 4.4553 21.3986 REMARK 3 T TENSOR REMARK 3 T11: 0.1809 T22: 0.1470 REMARK 3 T33: 0.1836 T12: -0.0031 REMARK 3 T13: -0.0290 T23: 0.0376 REMARK 3 L TENSOR REMARK 3 L11: 2.5084 L22: 1.1598 REMARK 3 L33: 2.4560 L12: 0.2147 REMARK 3 L13: -0.5910 L23: -0.2418 REMARK 3 S TENSOR REMARK 3 S11: -0.0300 S12: -0.1176 S13: 0.0491 REMARK 3 S21: -0.0341 S22: -0.0730 S23: -0.1589 REMARK 3 S31: -0.0869 S32: 0.0682 S33: 0.0969 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 28 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.6009 16.6856 11.7438 REMARK 3 T TENSOR REMARK 3 T11: 0.1541 T22: 0.2738 REMARK 3 T33: 0.1471 T12: 0.0143 REMARK 3 T13: 0.0063 T23: 0.0486 REMARK 3 L TENSOR REMARK 3 L11: 2.2816 L22: 7.4416 REMARK 3 L33: 5.0508 L12: -0.6512 REMARK 3 L13: 0.2881 L23: -2.1445 REMARK 3 S TENSOR REMARK 3 S11: -0.0682 S12: -0.4263 S13: -0.1757 REMARK 3 S21: -0.0799 S22: 0.0242 S23: 0.2681 REMARK 3 S31: 0.1953 S32: -0.3088 S33: 0.0669 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 29 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.8051 22.2877 4.1224 REMARK 3 T TENSOR REMARK 3 T11: 0.1619 T22: 0.1423 REMARK 3 T33: 0.1637 T12: 0.0010 REMARK 3 T13: 0.0110 T23: 0.0054 REMARK 3 L TENSOR REMARK 3 L11: 4.5838 L22: 5.5202 REMARK 3 L33: 5.0239 L12: -0.4317 REMARK 3 L13: 0.1039 L23: -2.3836 REMARK 3 S TENSOR REMARK 3 S11: -0.0851 S12: -0.1292 S13: 0.0642 REMARK 3 S21: -0.0827 S22: -0.2332 S23: -0.4359 REMARK 3 S31: -0.0330 S32: 0.1501 S33: 0.2720 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 42 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.4768 11.4707 3.7567 REMARK 3 T TENSOR REMARK 3 T11: 0.3626 T22: 0.1726 REMARK 3 T33: 0.3249 T12: 0.0083 REMARK 3 T13: 0.0585 T23: 0.0459 REMARK 3 L TENSOR REMARK 3 L11: 2.5579 L22: 3.8655 REMARK 3 L33: 3.1666 L12: -0.3827 REMARK 3 L13: 0.0508 L23: -2.2418 REMARK 3 S TENSOR REMARK 3 S11: -0.0561 S12: -0.2640 S13: -0.4908 REMARK 3 S21: -0.6774 S22: -0.0869 S23: -0.4456 REMARK 3 S31: 0.8264 S32: 0.0869 S33: 0.0967 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 94 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.7491 18.0355 6.0500 REMARK 3 T TENSOR REMARK 3 T11: 0.1589 T22: 0.1955 REMARK 3 T33: 0.2813 T12: 0.0194 REMARK 3 T13: 0.0010 T23: 0.0675 REMARK 3 L TENSOR REMARK 3 L11: 2.6987 L22: 3.6458 REMARK 3 L33: 6.6002 L12: 0.3175 REMARK 3 L13: -1.4914 L23: -3.6398 REMARK 3 S TENSOR REMARK 3 S11: -0.0269 S12: -0.2832 S13: -0.1050 REMARK 3 S21: -0.1287 S22: -0.2837 S23: -0.5280 REMARK 3 S31: 0.1120 S32: 0.3184 S33: 0.3223 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7SAH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-SEP-21. REMARK 100 THE DEPOSITION ID IS D_1000259926. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUL-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58133 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 1.05400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4EUL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM BICINE WITH 2% (W/V) 1,4-DIOXANE REMARK 280 AND 10% (W/V) PEG20000, PH 9.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.13800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.13800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.67650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.11900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.67650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.11900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 66.13800 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 37.67650 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 44.11900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 66.13800 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 37.67650 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 44.11900 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 530 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 VAL A 1 REMARK 465 SER A 2 REMARK 465 GLY A 232 REMARK 465 MET A 233 REMARK 465 ASP A 234 REMARK 465 GLU A 235 REMARK 465 LEU A 236 REMARK 465 TYR A 237 REMARK 465 LYS A 238 REMARK 465 MET B -18 REMARK 465 GLY B -17 REMARK 465 SER B -16 REMARK 465 SER B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 SER B -8 REMARK 465 SER B -7 REMARK 465 GLY B -6 REMARK 465 LEU B -5 REMARK 465 VAL B -4 REMARK 465 PRO B -3 REMARK 465 ARG B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE21 GLN B 5 O HOH B 204 1.58 REMARK 500 O HOH B 245 O HOH B 324 1.89 REMARK 500 O HOH A 532 O HOH A 543 1.99 REMARK 500 O HOH B 201 O HOH B 268 2.02 REMARK 500 OE1 GLU A 5 O HOH A 301 2.04 REMARK 500 O HOH A 591 O HOH A 602 2.05 REMARK 500 O HOH A 318 O HOH A 488 2.05 REMARK 500 O HOH A 301 O HOH A 582 2.05 REMARK 500 O HOH A 441 O HOH A 442 2.07 REMARK 500 O HOH A 429 O HOH A 556 2.07 REMARK 500 O HOH A 576 O HOH B 308 2.07 REMARK 500 O HOH A 423 O HOH A 459 2.08 REMARK 500 O HOH A 309 O HOH B 324 2.09 REMARK 500 O HOH A 543 O HOH A 596 2.10 REMARK 500 O HOH A 493 O HOH A 551 2.12 REMARK 500 O HOH A 396 O HOH A 579 2.14 REMARK 500 O HOH A 408 O HOH A 458 2.15 REMARK 500 O HOH A 615 O HOH A 616 2.16 REMARK 500 O HOH A 516 O HOH A 556 2.16 REMARK 500 O HOH B 242 O HOH B 317 2.17 REMARK 500 O HOH B 315 O HOH B 334 2.18 REMARK 500 OE2 GLU A 222 O HOH A 302 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 337 O HOH A 448 3555 2.02 REMARK 500 O HOH A 316 O HOH A 490 3555 2.02 REMARK 500 O HOH A 615 O HOH B 347 8455 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 103 -159.69 -154.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 618 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH A 619 DISTANCE = 7.09 ANGSTROMS REMARK 525 HOH B 360 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH B 361 DISTANCE = 6.11 ANGSTROMS DBREF 7SAH A 2 238 UNP P42212 GFP_AEQVI 2 238 DBREF 7SAH B -18 128 PDB 7SAH 7SAH -18 128 SEQADV 7SAH GLY A 0 UNP P42212 EXPRESSION TAG SEQADV 7SAH VAL A 1 UNP P42212 EXPRESSION TAG SEQADV 7SAH LEU A 64 UNP P42212 PHE 64 CONFLICT SEQADV 7SAH CRO A 66 UNP P42212 SER 65 CHROMOPHORE SEQADV 7SAH CRO A 66 UNP P42212 TYR 66 CHROMOPHORE SEQADV 7SAH CRO A 66 UNP P42212 GLY 67 CHROMOPHORE SEQADV 7SAH LEU A 231 UNP P42212 HIS 231 CONFLICT SEQRES 1 A 237 GLY VAL SER LYS GLY GLU GLU LEU PHE THR GLY VAL VAL SEQRES 2 A 237 PRO ILE LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS SEQRES 3 A 237 LYS PHE SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR SEQRES 4 A 237 TYR GLY LYS LEU THR LEU LYS PHE ILE CYS THR THR GLY SEQRES 5 A 237 LYS LEU PRO VAL PRO TRP PRO THR LEU VAL THR THR LEU SEQRES 6 A 237 CRO VAL GLN CYS PHE SER ARG TYR PRO ASP HIS MET LYS SEQRES 7 A 237 GLN HIS ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR SEQRES 8 A 237 VAL GLN GLU ARG THR ILE PHE PHE LYS ASP ASP GLY ASN SEQRES 9 A 237 TYR LYS THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR SEQRES 10 A 237 LEU VAL ASN ARG ILE GLU LEU LYS GLY ILE ASP PHE LYS SEQRES 11 A 237 GLU ASP GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN SEQRES 12 A 237 TYR ASN SER HIS ASN VAL TYR ILE MET ALA ASP LYS GLN SEQRES 13 A 237 LYS ASN GLY ILE LYS VAL ASN PHE LYS ILE ARG HIS ASN SEQRES 14 A 237 ILE GLU ASP GLY SER VAL GLN LEU ALA ASP HIS TYR GLN SEQRES 15 A 237 GLN ASN THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO SEQRES 16 A 237 ASP ASN HIS TYR LEU SER THR GLN SER ALA LEU SER LYS SEQRES 17 A 237 ASP PRO ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU SEQRES 18 A 237 PHE VAL THR ALA ALA GLY ILE THR LEU GLY MET ASP GLU SEQRES 19 A 237 LEU TYR LYS SEQRES 1 B 147 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 147 LEU VAL PRO ARG GLY SER MET ALA GLN VAL GLN LEU VAL SEQRES 3 B 147 GLU SER GLY GLY ARG LEU VAL GLN ALA GLY ASP SER LEU SEQRES 4 B 147 ARG LEU SER CYS ALA ALA SER GLY ARG THR PHE SER THR SEQRES 5 B 147 SER ALA MET ALA TRP PHE ARG GLN ALA PRO GLY ARG GLU SEQRES 6 B 147 ARG GLU PHE VAL ALA ALA ILE THR TRP THR VAL GLY ASN SEQRES 7 B 147 THR ILE LEU GLY ASP SER VAL LYS GLY ARG PHE THR ILE SEQRES 8 B 147 SER ARG ASP ARG ALA LYS ASN THR VAL ASP LEU GLN MET SEQRES 9 B 147 ASP ASN LEU GLU PRO GLU ASP THR ALA VAL TYR TYR CYS SEQRES 10 B 147 SER ALA ARG SER ARG GLY TYR VAL LEU SER VAL LEU ARG SEQRES 11 B 147 SER VAL ASP SER TYR ASP TYR TRP GLY GLN GLY THR GLN SEQRES 12 B 147 VAL THR VAL SER MODRES 7SAH CRO A 66 SER CHROMOPHORE MODRES 7SAH CRO A 66 TYR CHROMOPHORE MODRES 7SAH CRO A 66 GLY CHROMOPHORE HET CRO A 66 37 HETNAM CRO {2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4- HETNAM 2 CRO HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 CRO YL}ACETIC ACID HETSYN CRO PEPTIDE DERIVED CHROMOPHORE FORMUL 1 CRO C15 H17 N3 O5 FORMUL 3 HOH *480(H2 O) HELIX 1 AA1 LYS A 3 THR A 9 5 7 HELIX 2 AA2 PRO A 56 VAL A 61 5 6 HELIX 3 AA3 VAL A 68 SER A 72 5 5 HELIX 4 AA4 PRO A 75 HIS A 81 5 7 HELIX 5 AA5 ASP A 82 ALA A 87 1 6 HELIX 6 AA6 LYS A 156 ASN A 159 5 4 HELIX 7 AA7 THR B 30 THR B 33 5 4 HELIX 8 AA8 GLU B 89 THR B 93 5 5 HELIX 9 AA9 VAL B 106 TYR B 116 5 11 SHEET 1 AA112 VAL A 12 VAL A 22 0 SHEET 2 AA112 HIS A 25 ASP A 36 -1 O PHE A 27 N GLY A 20 SHEET 3 AA112 LYS A 41 CYS A 48 -1 O ILE A 47 N SER A 30 SHEET 4 AA112 HIS A 217 ALA A 227 -1 O LEU A 220 N LEU A 44 SHEET 5 AA112 HIS A 199 SER A 208 -1 N SER A 202 O THR A 225 SHEET 6 AA112 HIS A 148 ASP A 155 -1 N ILE A 152 O HIS A 199 SHEET 7 AA112 GLY A 160 ASN A 170 -1 O GLY A 160 N ASP A 155 SHEET 8 AA112 VAL A 176 PRO A 187 -1 O GLN A 177 N HIS A 169 SHEET 9 AA112 TYR A 92 PHE A 100 -1 N VAL A 93 O THR A 186 SHEET 10 AA112 ASN A 105 GLU A 115 -1 O TYR A 106 N ILE A 98 SHEET 11 AA112 THR A 118 ILE A 128 -1 O VAL A 120 N LYS A 113 SHEET 12 AA112 VAL A 12 VAL A 22 1 N ASP A 21 O GLY A 127 SHEET 1 AA2 4 VAL B 4 SER B 9 0 SHEET 2 AA2 4 LEU B 20 GLY B 28 -1 O SER B 27 N GLN B 5 SHEET 3 AA2 4 THR B 80 MET B 85 -1 O LEU B 83 N LEU B 22 SHEET 4 AA2 4 PHE B 70 ASP B 75 -1 N THR B 71 O GLN B 84 SHEET 1 AA3 6 LEU B 13 GLN B 15 0 SHEET 2 AA3 6 THR B 123 SER B 128 1 O THR B 126 N VAL B 14 SHEET 3 AA3 6 ALA B 94 ARG B 101 -1 N TYR B 96 O THR B 123 SHEET 4 AA3 6 ALA B 35 GLN B 41 -1 N PHE B 39 O TYR B 97 SHEET 5 AA3 6 GLU B 48 THR B 54 -1 O GLU B 48 N ARG B 40 SHEET 6 AA3 6 THR B 60 LEU B 62 -1 O ILE B 61 N ALA B 52 SHEET 1 AA4 4 LEU B 13 GLN B 15 0 SHEET 2 AA4 4 THR B 123 SER B 128 1 O THR B 126 N VAL B 14 SHEET 3 AA4 4 ALA B 94 ARG B 101 -1 N TYR B 96 O THR B 123 SHEET 4 AA4 4 TYR B 118 TRP B 119 -1 O TYR B 118 N ALA B 100 LINK C LEU A 64 N1 CRO A 66 1555 1555 1.33 LINK C3 CRO A 66 N VAL A 68 1555 1555 1.48 CISPEP 1 MET A 88 PRO A 89 0 6.95 CRYST1 75.353 88.238 132.276 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013271 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011333 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007560 0.00000