HEADER ONCOPROTEIN 29-SEP-21 7SCX TITLE KRAS FULL-LENGTH G12V IN COMPLEX WITH RGL1 RAS ASSOCIATION DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOFORM 2B OF GTPASE KRAS; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: K-RAS 2,KI-RAS,C-K-RAS,C-KI-RAS; COMPND 5 EC: 3.6.5.2; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: RAL GUANINE NUCLEOTIDE DISSOCIATION STIMULATOR-LIKE 1; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: RALGDS-LIKE 1; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KRAS, KRAS2, RASK2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: RGL1, KIAA0959, RGL; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GTPASE, RALGEF, COMPLEX, DOMAIN-SWAP, ONCOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.J.EVES,D.A.KUNTZ,M.IKURA,C.B.MARSHALL REVDAT 3 25-OCT-23 7SCX 1 REMARK REVDAT 2 07-JUN-23 7SCX 1 JRNL REVDAT 1 18-MAY-22 7SCX 0 JRNL AUTH B.J.EVES,T.GEBREGIWORGIS,G.M.C.GASMI-SEABROOK,D.A.KUNTZ, JRNL AUTH 2 G.G.PRIVE,C.B.MARSHALL,M.IKURA JRNL TITL STRUCTURES OF RGL1 RAS-ASSOCIATION DOMAIN IN COMPLEX WITH JRNL TITL 2 KRAS AND THE ONCOGENIC G12V MUTANT. JRNL REF J.MOL.BIOL. V. 434 67527 2022 JRNL REFN ESSN 1089-8638 JRNL PMID 35257782 JRNL DOI 10.1016/J.JMB.2022.167527 REMARK 2 REMARK 2 RESOLUTION. 1.96 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1_4122+SVN REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.96 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 20760 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1025 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.8600 - 3.7500 1.00 2897 159 0.1648 0.1817 REMARK 3 2 3.7500 - 2.9800 1.00 2839 142 0.1668 0.2264 REMARK 3 3 2.9800 - 2.6000 1.00 2829 141 0.1833 0.2356 REMARK 3 4 2.6000 - 2.3600 1.00 2794 147 0.1739 0.2553 REMARK 3 5 2.3600 - 2.1900 1.00 2791 142 0.1797 0.2480 REMARK 3 6 2.1900 - 2.0600 1.00 2770 158 0.2006 0.2750 REMARK 3 7 2.0600 - 1.9600 1.00 2815 136 0.2261 0.2506 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.215 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.806 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 37.53 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 2113 REMARK 3 ANGLE : 1.158 2865 REMARK 3 CHIRALITY : 0.064 324 REMARK 3 PLANARITY : 0.008 366 REMARK 3 DIHEDRAL : 6.336 297 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.3818 1.0821 17.4906 REMARK 3 T TENSOR REMARK 3 T11: 0.4839 T22: 0.3387 REMARK 3 T33: 0.4617 T12: 0.0783 REMARK 3 T13: -0.0987 T23: -0.0333 REMARK 3 L TENSOR REMARK 3 L11: 0.1812 L22: 0.1765 REMARK 3 L33: 0.2209 L12: 0.1619 REMARK 3 L13: 0.0466 L23: 0.0090 REMARK 3 S TENSOR REMARK 3 S11: -0.0103 S12: 0.2577 S13: -0.0766 REMARK 3 S21: -0.1512 S22: -0.3023 S23: 0.6967 REMARK 3 S31: -0.3893 S32: -0.1641 S33: 0.0004 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.3244 -2.0471 26.6216 REMARK 3 T TENSOR REMARK 3 T11: 0.3657 T22: 0.3230 REMARK 3 T33: 0.3711 T12: -0.0075 REMARK 3 T13: -0.0137 T23: -0.0292 REMARK 3 L TENSOR REMARK 3 L11: 0.5925 L22: 0.9478 REMARK 3 L33: 1.2700 L12: -0.2327 REMARK 3 L13: 0.2713 L23: -0.0704 REMARK 3 S TENSOR REMARK 3 S11: -0.0999 S12: -0.1579 S13: 0.1014 REMARK 3 S21: 0.2436 S22: 0.0505 S23: -0.0516 REMARK 3 S31: -0.2825 S32: -0.0841 S33: 0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 47 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.1849 -7.9238 20.5020 REMARK 3 T TENSOR REMARK 3 T11: 0.4471 T22: 0.4293 REMARK 3 T33: 0.4633 T12: -0.0139 REMARK 3 T13: -0.0119 T23: -0.0109 REMARK 3 L TENSOR REMARK 3 L11: 0.7201 L22: 0.4015 REMARK 3 L33: 0.4801 L12: 0.1694 REMARK 3 L13: 0.3771 L23: 0.3873 REMARK 3 S TENSOR REMARK 3 S11: -0.0532 S12: -0.0603 S13: -0.1552 REMARK 3 S21: -0.1291 S22: 0.0539 S23: -0.2325 REMARK 3 S31: 0.0121 S32: -0.1775 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 74 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.6030 -12.5594 12.4506 REMARK 3 T TENSOR REMARK 3 T11: 0.4515 T22: 0.3582 REMARK 3 T33: 0.3707 T12: -0.0033 REMARK 3 T13: -0.0097 T23: -0.0278 REMARK 3 L TENSOR REMARK 3 L11: 0.5171 L22: 0.3840 REMARK 3 L33: 1.5447 L12: 0.2463 REMARK 3 L13: 0.8562 L23: 0.1699 REMARK 3 S TENSOR REMARK 3 S11: 0.1000 S12: 0.2437 S13: -0.1198 REMARK 3 S21: -0.2116 S22: -0.0377 S23: 0.0485 REMARK 3 S31: 0.2814 S32: -0.0187 S33: 0.0001 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 105 THROUGH 169 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.7251 -2.5271 10.4766 REMARK 3 T TENSOR REMARK 3 T11: 0.4569 T22: 0.3779 REMARK 3 T33: 0.3674 T12: -0.0407 REMARK 3 T13: -0.0092 T23: 0.0289 REMARK 3 L TENSOR REMARK 3 L11: 1.0737 L22: 1.1675 REMARK 3 L33: 1.7734 L12: -0.9022 REMARK 3 L13: 0.4165 L23: 0.4579 REMARK 3 S TENSOR REMARK 3 S11: -0.1081 S12: 0.3786 S13: 0.0951 REMARK 3 S21: -0.4217 S22: -0.0396 S23: -0.0919 REMARK 3 S31: -0.2359 S32: 0.3153 S33: -0.0001 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 683 THROUGH 709 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.3010 -9.2107 36.6570 REMARK 3 T TENSOR REMARK 3 T11: 0.4195 T22: 0.4831 REMARK 3 T33: 0.3944 T12: -0.0370 REMARK 3 T13: 0.0650 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 0.4229 L22: 0.5177 REMARK 3 L33: 1.1429 L12: 0.4165 REMARK 3 L13: 0.5957 L23: 0.7553 REMARK 3 S TENSOR REMARK 3 S11: -0.0472 S12: -0.2450 S13: 0.0861 REMARK 3 S21: 0.4709 S22: 0.0324 S23: 0.4794 REMARK 3 S31: -0.3671 S32: -0.6016 S33: -0.0004 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 710 THROUGH 720 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.5075 -10.4688 43.8729 REMARK 3 T TENSOR REMARK 3 T11: 0.4738 T22: 0.5742 REMARK 3 T33: 0.4015 T12: 0.0504 REMARK 3 T13: -0.0336 T23: 0.0524 REMARK 3 L TENSOR REMARK 3 L11: 0.1169 L22: 0.0887 REMARK 3 L33: 0.0481 L12: -0.0217 REMARK 3 L13: -0.0226 L23: -0.0582 REMARK 3 S TENSOR REMARK 3 S11: 0.0627 S12: -0.5283 S13: 0.2516 REMARK 3 S21: 0.2346 S22: 0.1822 S23: -0.4706 REMARK 3 S31: 0.0947 S32: 0.4806 S33: -0.0005 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 721 THROUGH 738 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.5910 -3.7791 44.6939 REMARK 3 T TENSOR REMARK 3 T11: 0.5653 T22: 0.7391 REMARK 3 T33: 0.5063 T12: -0.0507 REMARK 3 T13: 0.0250 T23: -0.0673 REMARK 3 L TENSOR REMARK 3 L11: 0.4114 L22: 0.8769 REMARK 3 L33: 0.3210 L12: -0.3036 REMARK 3 L13: 0.2546 L23: -0.5235 REMARK 3 S TENSOR REMARK 3 S11: -0.0655 S12: -0.5383 S13: 0.8036 REMARK 3 S21: 0.4925 S22: -0.1405 S23: -0.2349 REMARK 3 S31: -0.7794 S32: 0.0843 S33: -0.0138 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 739 THROUGH 754 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.9121 -11.1787 45.5549 REMARK 3 T TENSOR REMARK 3 T11: 0.6026 T22: 0.9206 REMARK 3 T33: 0.5626 T12: -0.0766 REMARK 3 T13: 0.1721 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 0.3802 L22: 2.3886 REMARK 3 L33: 0.4426 L12: -0.0190 REMARK 3 L13: 0.4020 L23: 0.1256 REMARK 3 S TENSOR REMARK 3 S11: 0.3563 S12: -1.2670 S13: 0.0407 REMARK 3 S21: 0.5159 S22: -0.4570 S23: 0.7448 REMARK 3 S31: 0.2410 S32: -0.6316 S33: -0.0932 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 755 THROUGH 768 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.5136 -7.6806 25.7046 REMARK 3 T TENSOR REMARK 3 T11: 0.5445 T22: 0.6185 REMARK 3 T33: 0.4756 T12: -0.0136 REMARK 3 T13: 0.0449 T23: 0.0740 REMARK 3 L TENSOR REMARK 3 L11: 0.6399 L22: 0.1156 REMARK 3 L33: 0.2668 L12: -0.1182 REMARK 3 L13: -0.3150 L23: 0.0783 REMARK 3 S TENSOR REMARK 3 S11: -0.1421 S12: 0.0725 S13: -0.4109 REMARK 3 S21: 0.0601 S22: -0.0253 S23: -0.0452 REMARK 3 S31: -0.2411 S32: 0.5141 S33: 0.0005 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7SCX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-SEP-21. REMARK 100 THE DEPOSITION ID IS D_1000259954. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-MAR-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20768 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.960 REMARK 200 RESOLUTION RANGE LOW (A) : 33.860 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.02300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.96 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.00 REMARK 200 R MERGE FOR SHELL (I) : 0.34400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1LFD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS (PH 5.5), 25% W/V PEG REMARK 280 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 60.97500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 19.38500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 60.97500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 19.38500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -30.67749 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 60.95563 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 170 REMARK 465 SER A 171 REMARK 465 LYS A 172 REMARK 465 ASP A 173 REMARK 465 GLY A 174 REMARK 465 LYS A 175 REMARK 465 LYS A 176 REMARK 465 LYS A 177 REMARK 465 LYS A 178 REMARK 465 LYS A 179 REMARK 465 LYS A 180 REMARK 465 SER A 181 REMARK 465 LYS A 182 REMARK 465 THR A 183 REMARK 465 LYS A 184 REMARK 465 CYS A 185 REMARK 465 VAL A 186 REMARK 465 ILE A 187 REMARK 465 MET A 188 REMARK 465 GLN B 679 REMARK 465 GLN B 680 REMARK 465 ASN B 681 REMARK 465 GLU B 682 REMARK 465 ASN B 769 REMARK 465 SER B 770 REMARK 465 MET B 771 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 49 CG CD OE1 OE2 REMARK 470 LYS A 88 CD CE NZ REMARK 470 LYS A 128 CD CE NZ REMARK 470 ASP B 683 OD1 OD2 REMARK 470 ASP B 693 CG OD1 OD2 REMARK 470 GLU B 729 CG CD OE1 OE2 REMARK 470 GLU B 739 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 MG MG A 200 HOG2 GSP A 201 1.32 REMARK 500 O SER B 706 HD22 ASN B 750 1.55 REMARK 500 HH11 ARG A 161 O HOH A 301 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 33 75.58 -158.66 REMARK 500 ILE A 36 -62.73 -90.03 REMARK 500 GLU A 37 116.05 -169.11 REMARK 500 GLU A 168 9.05 -64.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 200 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 17 OG REMARK 620 2 THR A 35 OG1 84.7 REMARK 620 3 GSP A 201 O2G 173.1 88.6 REMARK 620 4 GSP A 201 O2B 92.6 176.1 94.1 REMARK 620 5 HOH A 321 O 87.9 88.3 90.6 88.8 REMARK 620 6 HOH A 343 O 88.6 94.4 93.2 88.3 175.4 REMARK 620 N 1 2 3 4 5 DBREF 7SCX A 1 188 UNP P01116 RASK_HUMAN 1 188 DBREF 7SCX B 679 771 UNP Q9NZL6 RGL1_HUMAN 644 736 SEQADV 7SCX VAL A 12 UNP P01116 GLY 12 ENGINEERED MUTATION SEQADV 7SCX SER A 118 UNP P01116 CYS 118 ENGINEERED MUTATION SEQRES 1 A 188 MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA VAL GLY SEQRES 2 A 188 VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN ASN SEQRES 3 A 188 HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SER SEQRES 4 A 188 TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS LEU SEQRES 5 A 188 LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SER SEQRES 6 A 188 ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY PHE SEQRES 7 A 188 LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE GLU SEQRES 8 A 188 ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL LYS SEQRES 9 A 188 ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN LYS SEQRES 10 A 188 SER ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN ALA SEQRES 11 A 188 GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE GLU SEQRES 12 A 188 THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP ALA PHE SEQRES 13 A 188 TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS GLU LYS SEQRES 14 A 188 MET SER LYS ASP GLY LYS LYS LYS LYS LYS LYS SER LYS SEQRES 15 A 188 THR LYS CYS VAL ILE MET SEQRES 1 B 93 GLN GLN ASN GLU ASP THR CYS ILE ILE ARG ILE SER VAL SEQRES 2 B 93 GLU ASP ASN ASN GLY ASN MET TYR LYS SER ILE MET LEU SEQRES 3 B 93 THR SER GLN ASP LYS THR PRO ALA VAL ILE GLN ARG ALA SEQRES 4 B 93 MET LEU LYS HIS ASN LEU ASP SER ASP PRO ALA GLU GLU SEQRES 5 B 93 TYR GLU LEU VAL GLN VAL ILE SER GLU ASP LYS GLU LEU SEQRES 6 B 93 VAL ILE PRO ASP SER ALA ASN VAL PHE TYR ALA MET ASN SEQRES 7 B 93 SER GLN VAL ASN PHE ASP PHE ILE LEU ARG LYS LYS ASN SEQRES 8 B 93 SER MET HET MG A 200 1 HET GSP A 201 46 HET PO4 A 202 5 HETNAM MG MAGNESIUM ION HETNAM GSP 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE HETNAM PO4 PHOSPHATE ION FORMUL 3 MG MG 2+ FORMUL 4 GSP C10 H16 N5 O13 P3 S FORMUL 5 PO4 O4 P 3- FORMUL 6 HOH *118(H2 O) HELIX 1 AA1 GLY A 15 ASN A 26 1 12 HELIX 2 AA2 GLN A 61 ALA A 66 5 6 HELIX 3 AA3 MET A 67 GLY A 75 1 9 HELIX 4 AA4 ASN A 86 ASP A 92 1 7 HELIX 5 AA5 ASP A 92 ASP A 105 1 14 HELIX 6 AA6 ASP A 126 GLY A 138 1 13 HELIX 7 AA7 GLY A 151 GLU A 168 1 18 HELIX 8 AA8 LYS B 709 HIS B 721 1 13 HELIX 9 AA9 PRO B 727 TYR B 731 5 5 HELIX 10 AB1 ASN B 750 MET B 755 1 6 SHEET 1 AA1 8 PHE A 141 GLU A 143 0 SHEET 2 AA1 8 MET A 111 ASN A 116 1 N LEU A 113 O ILE A 142 SHEET 3 AA1 8 GLY A 77 ALA A 83 1 N PHE A 82 O ASN A 116 SHEET 4 AA1 8 GLU A 3 GLY A 10 1 N VAL A 9 O VAL A 81 SHEET 5 AA1 8 GLU A 49 THR A 58 1 O ASP A 54 N LEU A 6 SHEET 6 AA1 8 GLU A 37 ILE A 46 -1 N ASP A 38 O ASP A 57 SHEET 7 AA1 8 ASN B 697 THR B 705 -1 O MET B 698 N SER A 39 SHEET 8 AA1 8 THR B 684 ILE B 689 -1 N CYS B 685 O LEU B 704 SHEET 1 AA2 2 LEU B 733 VAL B 736 0 SHEET 2 AA2 2 GLU B 742 ILE B 745 -1 O LEU B 743 N GLN B 735 LINK OG SER A 17 MG MG A 200 1555 1555 2.04 LINK OG1 THR A 35 MG MG A 200 1555 1555 2.10 LINK MG MG A 200 O2G GSP A 201 1555 1555 2.19 LINK MG MG A 200 O2B GSP A 201 1555 1555 2.02 LINK MG MG A 200 O HOH A 321 1555 1555 2.27 LINK MG MG A 200 O HOH A 343 1555 1555 2.02 CRYST1 121.950 38.770 68.240 90.00 116.72 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008200 0.000000 0.004127 0.00000 SCALE2 0.000000 0.025793 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016405 0.00000