HEADER DNA 29-SEP-21 7SDN TITLE [C:AG+:U] METAL-MEDIATED DNA BASE PAIR IN A SELF-ASSEMBLING TITLE 2 RHOMBOHEDRAL LATTICE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'- COMPND 3 D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*CP*TP*GP*GP*AP*CP*AP*TP*CP*A)- COMPND 4 3'); COMPND 5 CHAIN: A; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'-D(P*CP*CP*AP*UP*AP*CP*A)-3'); COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (5'-D(P*GP*GP*CP*TP*GP*CP*T)-3'); COMPND 13 CHAIN: C; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 4; COMPND 16 MOLECULE: DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'); COMPND 17 CHAIN: D; COMPND 18 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 8 ORGANISM_TAXID: 32630; SOURCE 9 MOL_ID: 3; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 12 ORGANISM_TAXID: 32630; SOURCE 13 MOL_ID: 4; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 16 ORGANISM_TAXID: 32630 KEYWDS TENSEGRITY TRIANGLE, SELF-ASSEMBLING CRYSTAL, METAL-MEDIATED KEYWDS 2 MISMATCH, DNA EXPDTA X-RAY DIFFRACTION AUTHOR S.VECCHIONI,B.LU,N.C.SEEMAN,R.SHA,Y.P.OHAYON REVDAT 3 22-MAY-24 7SDN 1 REMARK REVDAT 2 19-APR-23 7SDN 1 JRNL REVDAT 1 05-OCT-22 7SDN 0 JRNL AUTH S.VECCHIONI,B.LU,W.LIVERNOIS,Y.P.OHAYON,J.B.YODER,C.F.YANG, JRNL AUTH 2 K.WOLOSZYN,W.BERNFELD,M.P.ANANTRAM,J.W.CANARY, JRNL AUTH 3 W.A.HENDRICKSON,L.J.ROTHSCHILD,C.MAO,S.J.WIND,N.C.SEEMAN, JRNL AUTH 4 R.SHA JRNL TITL METAL-MEDIATED DNA NANOTECHNOLOGY IN 3D: STRUCTURAL LIBRARY JRNL TITL 2 BY TEMPLATED DIFFRACTION. JRNL REF ADV MATER 01938 2023 JRNL REFN ISSN 1521-4095 JRNL PMID 36939292 JRNL DOI 10.1002/ADMA.202201938 REMARK 2 REMARK 2 RESOLUTION. 4.32 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.32 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.910 REMARK 3 COMPLETENESS FOR RANGE (%) : 69.1 REMARK 3 NUMBER OF REFLECTIONS : 1846 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.790 REMARK 3 FREE R VALUE TEST SET COUNT : 214 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.8600 - 5.4500 0.98 2481 130 0.1513 0.1645 REMARK 3 2 5.4300 - 4.3200 0.41 499 84 0.3882 0.3676 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.188 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.755 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 295.5 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 314.3 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 956 REMARK 3 ANGLE : 0.890 1467 REMARK 3 CHIRALITY : 0.047 166 REMARK 3 PLANARITY : 0.005 42 REMARK 3 DIHEDRAL : 37.481 403 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 1:21 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.038 -3.195 23.555 REMARK 3 T TENSOR REMARK 3 T11: 4.6131 T22: 2.8788 REMARK 3 T33: 3.1607 T12: 0.2819 REMARK 3 T13: 0.1302 T23: 0.5675 REMARK 3 L TENSOR REMARK 3 L11: 5.0098 L22: 2.8334 REMARK 3 L33: -2.2970 L12: -0.8207 REMARK 3 L13: -0.3330 L23: -3.3328 REMARK 3 S TENSOR REMARK 3 S11: -0.3718 S12: -0.4387 S13: -1.0945 REMARK 3 S21: 2.2217 S22: 2.7446 S23: 4.6353 REMARK 3 S31: -1.1095 S32: -0.7121 S33: 0.0161 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN B AND RESID 1:7 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.259 -0.117 22.239 REMARK 3 T TENSOR REMARK 3 T11: 2.7845 T22: 3.2843 REMARK 3 T33: 2.5845 T12: 0.2680 REMARK 3 T13: -0.1174 T23: 0.5060 REMARK 3 L TENSOR REMARK 3 L11: 0.9914 L22: 0.0668 REMARK 3 L33: 0.6405 L12: 0.3137 REMARK 3 L13: 0.9935 L23: 0.5530 REMARK 3 S TENSOR REMARK 3 S11: -0.4679 S12: 2.6171 S13: 0.9569 REMARK 3 S21: -0.9930 S22: 2.9796 S23: -0.2117 REMARK 3 S31: 0.3778 S32: -2.9250 S33: 0.0004 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN C AND RESID 8:14 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.826 -20.754 35.256 REMARK 3 T TENSOR REMARK 3 T11: 3.9284 T22: 3.1173 REMARK 3 T33: 3.8940 T12: 0.3575 REMARK 3 T13: 0.0002 T23: 0.6566 REMARK 3 L TENSOR REMARK 3 L11: 0.8359 L22: 0.4569 REMARK 3 L33: 0.7501 L12: -0.8088 REMARK 3 L13: -0.7402 L23: 0.5891 REMARK 3 S TENSOR REMARK 3 S11: -1.9342 S12: -1.0585 S13: 0.7427 REMARK 3 S21: -1.1403 S22: 4.1550 S23: 0.6776 REMARK 3 S31: -0.4111 S32: -1.6076 S33: 0.0284 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN D AND RESID 1:7 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.127 19.748 8.581 REMARK 3 T TENSOR REMARK 3 T11: 4.5825 T22: 2.9629 REMARK 3 T33: 3.3254 T12: -0.2878 REMARK 3 T13: 1.0012 T23: 0.8865 REMARK 3 L TENSOR REMARK 3 L11: 1.6103 L22: 0.0115 REMARK 3 L33: 1.1515 L12: -0.3181 REMARK 3 L13: -0.6394 L23: 0.3540 REMARK 3 S TENSOR REMARK 3 S11: -3.4978 S12: 3.6998 S13: -1.9829 REMARK 3 S21: -3.3961 S22: 3.0536 S23: -0.5099 REMARK 3 S31: -2.8395 S32: -1.6906 S33: 0.0027 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7SDN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1000259472. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00743 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 1853 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.320 REMARK 200 RESOLUTION RANGE LOW (A) : 65.725 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 84.9 REMARK 200 DATA REDUNDANCY : 10.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.32 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 8.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MOPS, MAGNESIUM SULFATE, SILVER REMARK 280 NITRATE, PH 7.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 53.63600 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.96676 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 30.99933 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 53.63600 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 30.96676 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 30.99933 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 53.63600 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 30.96676 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 30.99933 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 61.93352 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 61.99867 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 61.93352 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 61.99867 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 61.93352 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 61.99867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DU B 4 C5' DU B 4 C4' 0.045 REMARK 500 DU B 4 C4' DU B 4 C3' -0.235 REMARK 500 DU B 4 C3' DU B 4 C2' 0.123 REMARK 500 DU B 4 C2' DU B 4 C1' -0.205 REMARK 500 DU B 4 O4' DU B 4 C1' 0.110 REMARK 500 DU B 4 O4' DU B 4 C4' 0.116 REMARK 500 DU B 4 N1 DU B 4 C2 0.088 REMARK 500 DU B 4 N1 DU B 4 C6 0.081 REMARK 500 DU B 4 C2 DU B 4 N3 0.124 REMARK 500 DU B 4 N3 DU B 4 C4 0.070 REMARK 500 DU B 4 C4 DU B 4 C5 0.058 REMARK 500 DU B 4 C5 DU B 4 C6 0.149 REMARK 500 DC D 1 P DC D 1 OP3 -0.126 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA A 2 O4' - C1' - N9 ANGL. DEV. = 2.6 DEGREES REMARK 500 DC A 7 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DT A 11 O4' - C1' - N1 ANGL. DEV. = 2.9 DEGREES REMARK 500 DC A 17 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DU B 4 OP1 - P - OP2 ANGL. DEV. = -9.4 DEGREES REMARK 500 DU B 4 C1' - O4' - C4' ANGL. DEV. = -7.9 DEGREES REMARK 500 DU B 4 N1 - C2 - N3 ANGL. DEV. = 4.9 DEGREES REMARK 500 DU B 4 C2 - N3 - C4 ANGL. DEV. = -6.5 DEGREES REMARK 500 DU B 4 N3 - C4 - C5 ANGL. DEV. = 5.0 DEGREES REMARK 500 DU B 4 C5 - C4 - O4 ANGL. DEV. = -5.8 DEGREES REMARK 500 DA B 7 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 DC D 1 O4' - C1' - N1 ANGL. DEV. = 3.5 DEGREES REMARK 500 DG D 3 O4' - C1' - N9 ANGL. DEV. = 3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 AG A 101 AG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DC A 12 N4 REMARK 620 2 DU B 4 O2 175.5 REMARK 620 3 DU B 4 N3 122.4 62.0 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7SD6 RELATED DB: PDB REMARK 900 CONTAINS A DIFFERENT BASE PAIR IN THE SAME MOTIF. DBREF 7SDN A 1 21 PDB 7SDN 7SDN 1 21 DBREF 7SDN B 1 7 PDB 7SDN 7SDN 1 7 DBREF 7SDN C 8 14 PDB 7SDN 7SDN 8 14 DBREF 7SDN D 1 7 PDB 7SDN 7SDN 1 7 SEQRES 1 A 21 DG DA DG DC DA DG DC DC DT DG DT DC DT SEQRES 2 A 21 DG DG DA DC DA DT DC DA SEQRES 1 B 7 DC DC DA DU DA DC DA SEQRES 1 C 7 DG DG DC DT DG DC DT SEQRES 1 D 7 DC DT DG DA DT DG DT HET AG A 101 1 HETNAM AG SILVER ION FORMUL 5 AG AG 1+ LINK N4 DC A 12 AG AG A 101 1555 1555 2.03 LINK AG AG A 101 O2 DU B 4 1555 1555 2.10 LINK AG AG A 101 N3 DU B 4 1555 1555 2.41 CRYST1 107.272 107.272 92.998 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009322 0.005382 0.000000 0.00000 SCALE2 0.000000 0.010764 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010753 0.00000