HEADER DNA 29-SEP-21 7SE5 TITLE [IU:HG2+:IU] METAL-MEDIATED DNA BASE PAIR IN A SELF-ASSEMBLING TITLE 2 RHOMBOHEDRAL LATTICE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*(5IU) COMPND 3 P*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'); COMPND 4 CHAIN: A; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (5'-D(P*CP*CP*AP*(5IU)P*AP*CP*A)-3'); COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: DNA (5'-D(P*GP*GP*CP*TP*GP*CP*T)-3'); COMPND 12 CHAIN: C; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'); COMPND 16 CHAIN: D; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 8 ORGANISM_TAXID: 32630; SOURCE 9 MOL_ID: 3; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 12 ORGANISM_TAXID: 32630; SOURCE 13 MOL_ID: 4; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 16 ORGANISM_TAXID: 32630 KEYWDS TENSEGRITY TRIANGLE, SELF-ASSEMBLING CRYSTAL, METAL-MEDIATED KEYWDS 2 MISMATCH, DNA EXPDTA X-RAY DIFFRACTION AUTHOR B.LU,S.VECCHIONI,N.C.SEEMAN,R.SHA,Y.P.OHAYON REVDAT 3 22-MAY-24 7SE5 1 REMARK REVDAT 2 19-APR-23 7SE5 1 JRNL REVDAT 1 05-OCT-22 7SE5 0 JRNL AUTH S.VECCHIONI,B.LU,W.LIVERNOIS,Y.P.OHAYON,J.B.YODER,C.F.YANG, JRNL AUTH 2 K.WOLOSZYN,W.BERNFELD,M.P.ANANTRAM,J.W.CANARY, JRNL AUTH 3 W.A.HENDRICKSON,L.J.ROTHSCHILD,C.MAO,S.J.WIND,N.C.SEEMAN, JRNL AUTH 4 R.SHA JRNL TITL METAL-MEDIATED DNA NANOTECHNOLOGY IN 3D: STRUCTURAL LIBRARY JRNL TITL 2 BY TEMPLATED DIFFRACTION. JRNL REF ADV MATER 01938 2023 JRNL REFN ISSN 1521-4095 JRNL PMID 36939292 JRNL DOI 10.1002/ADMA.202201938 REMARK 2 REMARK 2 RESOLUTION. 4.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.39 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 69.6 REMARK 3 NUMBER OF REFLECTIONS : 2093 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.490 REMARK 3 FREE R VALUE TEST SET COUNT : 115 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.3900 - 4.0500 0.70 1978 115 0.2018 0.2483 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.762 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.423 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 258.0 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 241.6 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 958 REMARK 3 ANGLE : 1.014 1471 REMARK 3 CHIRALITY : 0.049 159 REMARK 3 PLANARITY : 0.004 42 REMARK 3 DIHEDRAL : 36.512 435 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 1:21 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.918 -3.145 23.588 REMARK 3 T TENSOR REMARK 3 T11: 2.5979 T22: 2.4052 REMARK 3 T33: 1.9759 T12: 0.1970 REMARK 3 T13: 0.2310 T23: 0.3945 REMARK 3 L TENSOR REMARK 3 L11: 0.4663 L22: 8.2042 REMARK 3 L33: -0.3941 L12: 2.8170 REMARK 3 L13: -0.6003 L23: -3.7595 REMARK 3 S TENSOR REMARK 3 S11: -0.1447 S12: 0.2703 S13: -0.2242 REMARK 3 S21: -0.9214 S22: 1.2441 S23: 1.9868 REMARK 3 S31: 0.3672 S32: -0.7417 S33: -1.1651 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN B AND RESID 1:7 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.414 -0.310 22.244 REMARK 3 T TENSOR REMARK 3 T11: 1.7422 T22: 2.0174 REMARK 3 T33: 1.9316 T12: 0.2943 REMARK 3 T13: -0.1842 T23: 0.3772 REMARK 3 L TENSOR REMARK 3 L11: 2.1664 L22: 4.5899 REMARK 3 L33: 3.6326 L12: 3.1763 REMARK 3 L13: -2.7053 L23: -4.1944 REMARK 3 S TENSOR REMARK 3 S11: -0.6631 S12: 2.6270 S13: -0.4800 REMARK 3 S21: 0.0115 S22: 3.2119 S23: 2.0953 REMARK 3 S31: -0.2227 S32: -2.4637 S33: -1.2681 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN C AND RESID 8:14 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.009 -20.523 35.387 REMARK 3 T TENSOR REMARK 3 T11: 2.4383 T22: 3.0144 REMARK 3 T33: 2.9037 T12: 0.6811 REMARK 3 T13: -0.7014 T23: -0.0868 REMARK 3 L TENSOR REMARK 3 L11: 5.3749 L22: 5.6219 REMARK 3 L33: 9.6180 L12: 5.9211 REMARK 3 L13: -5.0667 L23: -4.6773 REMARK 3 S TENSOR REMARK 3 S11: -3.4657 S12: -3.9613 S13: 5.9890 REMARK 3 S21: -0.2518 S22: 3.4010 S23: 4.3862 REMARK 3 S31: -1.2373 S32: -3.3003 S33: -0.9777 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN D AND RESID 1:7 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.281 19.735 8.677 REMARK 3 T TENSOR REMARK 3 T11: 3.1477 T22: 2.0040 REMARK 3 T33: 2.4143 T12: -0.1871 REMARK 3 T13: 1.1869 T23: 0.3539 REMARK 3 L TENSOR REMARK 3 L11: 9.8931 L22: 3.9750 REMARK 3 L33: 4.6102 L12: 3.3694 REMARK 3 L13: -6.0926 L23: -1.0677 REMARK 3 S TENSOR REMARK 3 S11: -0.6770 S12: 3.6731 S13: -1.9113 REMARK 3 S21: -2.7880 S22: 3.6843 S23: 0.1863 REMARK 3 S31: -2.5921 S32: -2.1196 S33: -0.1800 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7SE5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1000259399. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-FEB-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00743 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : STARANISO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 2158 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.935 REMARK 200 RESOLUTION RANGE LOW (A) : 63.585 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.6 REMARK 200 DATA REDUNDANCY : 10.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 59.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 7.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MOPS, MAGNESIUM SULFATE, MERCURY REMARK 280 CHLORIDE, PH 7.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 53.22700 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.73062 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 29.27100 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 53.22700 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 30.73062 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 29.27100 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 53.22700 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 30.73062 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.27100 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 61.46125 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 58.54200 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 61.46125 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 58.54200 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 61.46125 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 58.54200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC D 1 P DC D 1 OP3 -0.126 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA A 2 O4' - C1' - N9 ANGL. DEV. = 3.6 DEGREES REMARK 500 DC A 7 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DT A 11 O4' - C1' - N1 ANGL. DEV. = 4.3 DEGREES REMARK 500 DC D 1 O4' - C1' - N1 ANGL. DEV. = 3.1 DEGREES REMARK 500 DG D 3 O4' - C1' - N9 ANGL. DEV. = 2.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG B 101 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 5IU A 12 N3 REMARK 620 2 5IU A 12 O4 63.5 REMARK 620 3 5IU B 4 N3 170.3 116.5 REMARK 620 4 5IU B 4 O2 136.2 159.5 45.4 REMARK 620 5 5IU B 4 O4 127.9 68.3 49.1 94.5 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7SD6 RELATED DB: PDB REMARK 900 CONTAINS A DIFFERENT BASE PAIR IN THE SAME MOTIF. DBREF 7SE5 A 1 21 PDB 7SE5 7SE5 1 21 DBREF 7SE5 B 1 7 PDB 7SE5 7SE5 1 7 DBREF 7SE5 C 8 14 PDB 7SE5 7SE5 8 14 DBREF 7SE5 D 1 7 PDB 7SE5 7SE5 1 7 SEQRES 1 A 21 DG DA DG DC DA DG DC DC DT DG DT 5IU DT SEQRES 2 A 21 DG DG DA DC DA DT DC DA SEQRES 1 B 7 DC DC DA 5IU DA DC DA SEQRES 1 C 7 DG DG DC DT DG DC DT SEQRES 1 D 7 DC DT DG DA DT DG DT HET 5IU A 12 20 HET 5IU B 4 20 HET HG B 101 1 HETNAM 5IU 5-IODO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE HETNAM HG MERCURY (II) ION FORMUL 1 5IU 2(C9 H12 I N2 O8 P) FORMUL 5 HG HG 2+ LINK O3' DT A 11 P 5IU A 12 1555 1555 1.61 LINK O3' 5IU A 12 P DT A 13 1555 1555 1.61 LINK O3' DA B 3 P 5IU B 4 1555 1555 1.61 LINK O3' 5IU B 4 P DA B 5 1555 1555 1.60 LINK N3 5IU A 12 HG HG B 101 1555 1555 2.11 LINK O4 5IU A 12 HG HG B 101 1555 1555 2.40 LINK N3 5IU B 4 HG HG B 101 1555 1555 2.10 LINK O2 5IU B 4 HG HG B 101 1555 1555 3.04 LINK O4 5IU B 4 HG HG B 101 1555 1555 3.16 CRYST1 106.454 106.454 87.813 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009394 0.005423 0.000000 0.00000 SCALE2 0.000000 0.010847 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011388 0.00000