HEADER OXIDOREDUCTASE 30-SEP-21 7SEH TITLE GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE (K403QDLTL) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: G6PD; COMPND 5 EC: 1.1.1.49; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: G6PD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: C43; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-28A (+) KEYWDS GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE, DIMER-TETRAMER LOCKED, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR I.I.MATHEWS,A.A.GARCIA,S.WAKATSUKI,D.MOCHLY-ROSEN REVDAT 2 18-OCT-23 7SEH 1 REMARK REVDAT 1 17-AUG-22 7SEH 0 JRNL AUTH A.A.GARCIA,I.I.MATHEWS,N.HORIKOSHI,T.MATSUI,M.KAUR, JRNL AUTH 2 S.WAKATSUKI,D.MOCHLY-ROSEN JRNL TITL STABILIZATION OF GLUCOSE-6-PHOSPHATE DEHYDROGENASE OLIGOMERS JRNL TITL 2 ENHANCES CATALYTIC ACTIVITY AND STABILITY OF CLINICAL JRNL TITL 3 VARIANTS. JRNL REF J.BIOL.CHEM. V. 298 01610 2022 JRNL REFN ESSN 1083-351X JRNL PMID 35065072 JRNL DOI 10.1016/J.JBC.2022.101610 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 22903 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.302 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1206 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1668 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3390 REMARK 3 BIN FREE R VALUE SET COUNT : 88 REMARK 3 BIN FREE R VALUE : 0.3730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7158 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 96 REMARK 3 SOLVENT ATOMS : 36 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 79.84 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 77.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.85000 REMARK 3 B22 (A**2) : -2.64000 REMARK 3 B33 (A**2) : -1.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.502 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.425 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 23.469 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.890 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7422 ; 0.005 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 6983 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10051 ; 1.489 ; 1.648 REMARK 3 BOND ANGLES OTHERS (DEGREES): 16035 ; 1.145 ; 1.581 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 878 ; 8.001 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 432 ;36.088 ;21.597 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1276 ;21.517 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 62 ;18.115 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 946 ; 0.063 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8369 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1813 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7SEH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1000260072. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAY-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : FLAT SI RH COATED MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24109 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 38.990 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 13.06 REMARK 200 R MERGE (I) : 0.19900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.7100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.58 REMARK 200 R MERGE FOR SHELL (I) : 2.86600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.510 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6VA7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2,2'-DISULFANEDIYLBIS(N-(2-(1H-INDOL-3 REMARK 280 -YL)ETHYL)ETHAN-1-AMINE), NADP+, MES, PEG4000, MGCL2, PH 6.5, REMARK 280 VAPOR DIFFUSION, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.32000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.34000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.93000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 80.34000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.32000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.93000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 37.32000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -87.86000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 80.34000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLU A 3 REMARK 465 GLN A 4 REMARK 465 VAL A 5 REMARK 465 ALA A 6 REMARK 465 LEU A 7 REMARK 465 SER A 8 REMARK 465 ARG A 9 REMARK 465 THR A 10 REMARK 465 GLN A 11 REMARK 465 VAL A 12 REMARK 465 CYS A 13 REMARK 465 GLY A 14 REMARK 465 ILE A 15 REMARK 465 LEU A 16 REMARK 465 ARG A 17 REMARK 465 GLU A 18 REMARK 465 GLU A 19 REMARK 465 LEU A 20 REMARK 465 PHE A 21 REMARK 465 GLN A 22 REMARK 465 GLY A 23 REMARK 465 ASP A 24 REMARK 465 ALA A 25 REMARK 465 PHE A 26 REMARK 465 HIS A 27 REMARK 465 ALA A 377 REMARK 465 GLY A 378 REMARK 465 ASP A 379 REMARK 465 GLN A 395 REMARK 465 PRO A 396 REMARK 465 ASN A 397 REMARK 465 GLU A 398 REMARK 465 LYS A 407 REMARK 465 LYS A 408 REMARK 465 PRO A 409 REMARK 465 GLY A 410 REMARK 465 MET A 411 REMARK 465 PHE A 412 REMARK 465 PHE A 413 REMARK 465 ASN A 414 REMARK 465 PRO A 415 REMARK 465 GLU A 416 REMARK 465 GLU A 417 REMARK 465 SER A 418 REMARK 465 GLU A 419 REMARK 465 LEU A 420 REMARK 465 ASP A 421 REMARK 465 LEU A 422 REMARK 465 THR A 423 REMARK 465 TYR A 424 REMARK 465 GLY A 425 REMARK 465 ASN A 426 REMARK 465 ARG A 427 REMARK 465 TYR A 428 REMARK 465 LYS A 429 REMARK 465 ASN A 430 REMARK 465 VAL A 431 REMARK 465 LYS A 432 REMARK 465 TYR A 503 REMARK 465 GLU A 504 REMARK 465 GLY A 505 REMARK 465 THR A 506 REMARK 465 TYR A 507 REMARK 465 LYS A 508 REMARK 465 TRP A 509 REMARK 465 VAL A 510 REMARK 465 ASN A 511 REMARK 465 PRO A 512 REMARK 465 HIS A 513 REMARK 465 LYS A 514 REMARK 465 LEU A 515 REMARK 465 CYS A 516 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 GLU B 3 REMARK 465 GLN B 4 REMARK 465 VAL B 5 REMARK 465 ALA B 6 REMARK 465 LEU B 7 REMARK 465 SER B 8 REMARK 465 ARG B 9 REMARK 465 THR B 10 REMARK 465 GLN B 11 REMARK 465 VAL B 12 REMARK 465 CYS B 13 REMARK 465 GLY B 14 REMARK 465 ILE B 15 REMARK 465 LEU B 16 REMARK 465 ARG B 17 REMARK 465 GLU B 18 REMARK 465 GLU B 19 REMARK 465 LEU B 20 REMARK 465 PHE B 21 REMARK 465 GLN B 22 REMARK 465 GLY B 23 REMARK 465 ASP B 24 REMARK 465 ALA B 25 REMARK 465 PHE B 26 REMARK 465 HIS B 27 REMARK 465 GLN B 28 REMARK 465 SER B 29 REMARK 465 VAL B 394 REMARK 465 GLN B 395 REMARK 465 PRO B 396 REMARK 465 ASN B 397 REMARK 465 LYS B 407 REMARK 465 LYS B 408 REMARK 465 PRO B 409 REMARK 465 GLY B 410 REMARK 465 MET B 411 REMARK 465 PHE B 412 REMARK 465 PHE B 413 REMARK 465 ASN B 414 REMARK 465 PRO B 415 REMARK 465 GLU B 416 REMARK 465 GLU B 417 REMARK 465 SER B 418 REMARK 465 GLU B 419 REMARK 465 LEU B 420 REMARK 465 ASP B 421 REMARK 465 LEU B 422 REMARK 465 THR B 423 REMARK 465 TYR B 424 REMARK 465 GLY B 425 REMARK 465 ASN B 426 REMARK 465 ARG B 427 REMARK 465 TYR B 428 REMARK 465 LYS B 429 REMARK 465 ASN B 430 REMARK 465 VAL B 431 REMARK 465 LYS B 432 REMARK 465 TYR B 503 REMARK 465 GLU B 504 REMARK 465 GLY B 505 REMARK 465 THR B 506 REMARK 465 TYR B 507 REMARK 465 LYS B 508 REMARK 465 TRP B 509 REMARK 465 VAL B 510 REMARK 465 ASN B 511 REMARK 465 PRO B 512 REMARK 465 HIS B 513 REMARK 465 LYS B 514 REMARK 465 LEU B 515 REMARK 465 CYS B 516 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 501 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS A 47 OG1 THR A 51 1.91 REMARK 500 O PRO A 326 NH2 ARG B 192 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 47 -48.79 -135.96 REMARK 500 LYS A 89 53.47 34.66 REMARK 500 HIS A 129 105.02 -55.18 REMARK 500 SER A 132 -61.87 -28.45 REMARK 500 ALA A 141 51.15 -93.09 REMARK 500 PRO A 144 16.38 -68.66 REMARK 500 SER A 157 -56.45 -131.57 REMARK 500 HIS A 201 24.27 -158.22 REMARK 500 GLU A 206 55.75 -101.67 REMARK 500 ARG A 246 42.20 -94.04 REMARK 500 PHE A 253 -51.54 -123.42 REMARK 500 ASN A 262 -86.63 -113.76 REMARK 500 LYS A 275 106.91 -27.64 REMARK 500 ASP A 350 132.05 174.64 REMARK 500 HIS A 382 55.73 28.62 REMARK 500 GLN A 383 112.31 175.32 REMARK 500 GLN A 384 108.73 -31.01 REMARK 500 LYS A 386 142.26 73.84 REMARK 500 VAL A 400 -150.84 -117.95 REMARK 500 MET A 405 -154.38 -89.62 REMARK 500 LYS B 47 -54.89 -121.13 REMARK 500 ALA B 141 58.04 -106.46 REMARK 500 PRO B 144 -8.73 -57.09 REMARK 500 GLU B 244 60.74 28.70 REMARK 500 ASN B 262 -73.07 -101.26 REMARK 500 LYS B 275 121.02 -33.57 REMARK 500 SER B 278 -157.75 -158.54 REMARK 500 THR B 333 47.96 -96.83 REMARK 500 GLU B 345 92.41 -69.68 REMARK 500 ASP B 350 109.79 -176.31 REMARK 500 LEU B 362 -165.39 -108.24 REMARK 500 ILE B 380 -78.86 -49.79 REMARK 500 ALA B 399 135.46 -32.58 REMARK 500 VAL B 400 -159.73 -101.94 REMARK 500 ALA B 436 -96.09 47.73 REMARK 500 LYS B 476 78.01 23.41 REMARK 500 REMARK 500 REMARK: NULL DBREF 7SEH A 1 515 UNP P11413 G6PD_HUMAN 1 515 DBREF 7SEH B 1 515 UNP P11413 G6PD_HUMAN 1 515 SEQADV 7SEH GLY A -3 UNP P11413 EXPRESSION TAG SEQADV 7SEH SER A -2 UNP P11413 EXPRESSION TAG SEQADV 7SEH HIS A -1 UNP P11413 EXPRESSION TAG SEQADV 7SEH MET A 0 UNP P11413 EXPRESSION TAG SEQADV 7SEH CYS A 277 UNP P11413 ALA 277 ENGINEERED MUTATION SEQADV 7SEH GLN A 403 UNP P11413 LYS 403 ENGINEERED MUTATION SEQADV 7SEH CYS A 516 UNP P11413 INSERTION SEQADV 7SEH GLY B -3 UNP P11413 EXPRESSION TAG SEQADV 7SEH SER B -2 UNP P11413 EXPRESSION TAG SEQADV 7SEH HIS B -1 UNP P11413 EXPRESSION TAG SEQADV 7SEH MET B 0 UNP P11413 EXPRESSION TAG SEQADV 7SEH CYS B 277 UNP P11413 ALA 277 ENGINEERED MUTATION SEQADV 7SEH GLN B 403 UNP P11413 LYS 403 ENGINEERED MUTATION SEQADV 7SEH CYS B 516 UNP P11413 INSERTION SEQRES 1 A 520 GLY SER HIS MET MET ALA GLU GLN VAL ALA LEU SER ARG SEQRES 2 A 520 THR GLN VAL CYS GLY ILE LEU ARG GLU GLU LEU PHE GLN SEQRES 3 A 520 GLY ASP ALA PHE HIS GLN SER ASP THR HIS ILE PHE ILE SEQRES 4 A 520 ILE MET GLY ALA SER GLY ASP LEU ALA LYS LYS LYS ILE SEQRES 5 A 520 TYR PRO THR ILE TRP TRP LEU PHE ARG ASP GLY LEU LEU SEQRES 6 A 520 PRO GLU ASN THR PHE ILE VAL GLY TYR ALA ARG SER ARG SEQRES 7 A 520 LEU THR VAL ALA ASP ILE ARG LYS GLN SER GLU PRO PHE SEQRES 8 A 520 PHE LYS ALA THR PRO GLU GLU LYS LEU LYS LEU GLU ASP SEQRES 9 A 520 PHE PHE ALA ARG ASN SER TYR VAL ALA GLY GLN TYR ASP SEQRES 10 A 520 ASP ALA ALA SER TYR GLN ARG LEU ASN SER HIS MET ASN SEQRES 11 A 520 ALA LEU HIS LEU GLY SER GLN ALA ASN ARG LEU PHE TYR SEQRES 12 A 520 LEU ALA LEU PRO PRO THR VAL TYR GLU ALA VAL THR LYS SEQRES 13 A 520 ASN ILE HIS GLU SER CYS MET SER GLN ILE GLY TRP ASN SEQRES 14 A 520 ARG ILE ILE VAL GLU LYS PRO PHE GLY ARG ASP LEU GLN SEQRES 15 A 520 SER SER ASP ARG LEU SER ASN HIS ILE SER SER LEU PHE SEQRES 16 A 520 ARG GLU ASP GLN ILE TYR ARG ILE ASP HIS TYR LEU GLY SEQRES 17 A 520 LYS GLU MET VAL GLN ASN LEU MET VAL LEU ARG PHE ALA SEQRES 18 A 520 ASN ARG ILE PHE GLY PRO ILE TRP ASN ARG ASP ASN ILE SEQRES 19 A 520 ALA CYS VAL ILE LEU THR PHE LYS GLU PRO PHE GLY THR SEQRES 20 A 520 GLU GLY ARG GLY GLY TYR PHE ASP GLU PHE GLY ILE ILE SEQRES 21 A 520 ARG ASP VAL MET GLN ASN HIS LEU LEU GLN MET LEU CYS SEQRES 22 A 520 LEU VAL ALA MET GLU LYS PRO CYS SER THR ASN SER ASP SEQRES 23 A 520 ASP VAL ARG ASP GLU LYS VAL LYS VAL LEU LYS CYS ILE SEQRES 24 A 520 SER GLU VAL GLN ALA ASN ASN VAL VAL LEU GLY GLN TYR SEQRES 25 A 520 VAL GLY ASN PRO ASP GLY GLU GLY GLU ALA THR LYS GLY SEQRES 26 A 520 TYR LEU ASP ASP PRO THR VAL PRO ARG GLY SER THR THR SEQRES 27 A 520 ALA THR PHE ALA ALA VAL VAL LEU TYR VAL GLU ASN GLU SEQRES 28 A 520 ARG TRP ASP GLY VAL PRO PHE ILE LEU ARG CYS GLY LYS SEQRES 29 A 520 ALA LEU ASN GLU ARG LYS ALA GLU VAL ARG LEU GLN PHE SEQRES 30 A 520 HIS ASP VAL ALA GLY ASP ILE PHE HIS GLN GLN CYS LYS SEQRES 31 A 520 ARG ASN GLU LEU VAL ILE ARG VAL GLN PRO ASN GLU ALA SEQRES 32 A 520 VAL TYR THR GLN MET MET THR LYS LYS PRO GLY MET PHE SEQRES 33 A 520 PHE ASN PRO GLU GLU SER GLU LEU ASP LEU THR TYR GLY SEQRES 34 A 520 ASN ARG TYR LYS ASN VAL LYS LEU PRO ASP ALA TYR GLU SEQRES 35 A 520 ARG LEU ILE LEU ASP VAL PHE CYS GLY SER GLN MET HIS SEQRES 36 A 520 PHE VAL ARG SER ASP GLU LEU ARG GLU ALA TRP ARG ILE SEQRES 37 A 520 PHE THR PRO LEU LEU HIS GLN ILE GLU LEU GLU LYS PRO SEQRES 38 A 520 LYS PRO ILE PRO TYR ILE TYR GLY SER ARG GLY PRO THR SEQRES 39 A 520 GLU ALA ASP GLU LEU MET LYS ARG VAL GLY PHE GLN TYR SEQRES 40 A 520 GLU GLY THR TYR LYS TRP VAL ASN PRO HIS LYS LEU CYS SEQRES 1 B 520 GLY SER HIS MET MET ALA GLU GLN VAL ALA LEU SER ARG SEQRES 2 B 520 THR GLN VAL CYS GLY ILE LEU ARG GLU GLU LEU PHE GLN SEQRES 3 B 520 GLY ASP ALA PHE HIS GLN SER ASP THR HIS ILE PHE ILE SEQRES 4 B 520 ILE MET GLY ALA SER GLY ASP LEU ALA LYS LYS LYS ILE SEQRES 5 B 520 TYR PRO THR ILE TRP TRP LEU PHE ARG ASP GLY LEU LEU SEQRES 6 B 520 PRO GLU ASN THR PHE ILE VAL GLY TYR ALA ARG SER ARG SEQRES 7 B 520 LEU THR VAL ALA ASP ILE ARG LYS GLN SER GLU PRO PHE SEQRES 8 B 520 PHE LYS ALA THR PRO GLU GLU LYS LEU LYS LEU GLU ASP SEQRES 9 B 520 PHE PHE ALA ARG ASN SER TYR VAL ALA GLY GLN TYR ASP SEQRES 10 B 520 ASP ALA ALA SER TYR GLN ARG LEU ASN SER HIS MET ASN SEQRES 11 B 520 ALA LEU HIS LEU GLY SER GLN ALA ASN ARG LEU PHE TYR SEQRES 12 B 520 LEU ALA LEU PRO PRO THR VAL TYR GLU ALA VAL THR LYS SEQRES 13 B 520 ASN ILE HIS GLU SER CYS MET SER GLN ILE GLY TRP ASN SEQRES 14 B 520 ARG ILE ILE VAL GLU LYS PRO PHE GLY ARG ASP LEU GLN SEQRES 15 B 520 SER SER ASP ARG LEU SER ASN HIS ILE SER SER LEU PHE SEQRES 16 B 520 ARG GLU ASP GLN ILE TYR ARG ILE ASP HIS TYR LEU GLY SEQRES 17 B 520 LYS GLU MET VAL GLN ASN LEU MET VAL LEU ARG PHE ALA SEQRES 18 B 520 ASN ARG ILE PHE GLY PRO ILE TRP ASN ARG ASP ASN ILE SEQRES 19 B 520 ALA CYS VAL ILE LEU THR PHE LYS GLU PRO PHE GLY THR SEQRES 20 B 520 GLU GLY ARG GLY GLY TYR PHE ASP GLU PHE GLY ILE ILE SEQRES 21 B 520 ARG ASP VAL MET GLN ASN HIS LEU LEU GLN MET LEU CYS SEQRES 22 B 520 LEU VAL ALA MET GLU LYS PRO CYS SER THR ASN SER ASP SEQRES 23 B 520 ASP VAL ARG ASP GLU LYS VAL LYS VAL LEU LYS CYS ILE SEQRES 24 B 520 SER GLU VAL GLN ALA ASN ASN VAL VAL LEU GLY GLN TYR SEQRES 25 B 520 VAL GLY ASN PRO ASP GLY GLU GLY GLU ALA THR LYS GLY SEQRES 26 B 520 TYR LEU ASP ASP PRO THR VAL PRO ARG GLY SER THR THR SEQRES 27 B 520 ALA THR PHE ALA ALA VAL VAL LEU TYR VAL GLU ASN GLU SEQRES 28 B 520 ARG TRP ASP GLY VAL PRO PHE ILE LEU ARG CYS GLY LYS SEQRES 29 B 520 ALA LEU ASN GLU ARG LYS ALA GLU VAL ARG LEU GLN PHE SEQRES 30 B 520 HIS ASP VAL ALA GLY ASP ILE PHE HIS GLN GLN CYS LYS SEQRES 31 B 520 ARG ASN GLU LEU VAL ILE ARG VAL GLN PRO ASN GLU ALA SEQRES 32 B 520 VAL TYR THR GLN MET MET THR LYS LYS PRO GLY MET PHE SEQRES 33 B 520 PHE ASN PRO GLU GLU SER GLU LEU ASP LEU THR TYR GLY SEQRES 34 B 520 ASN ARG TYR LYS ASN VAL LYS LEU PRO ASP ALA TYR GLU SEQRES 35 B 520 ARG LEU ILE LEU ASP VAL PHE CYS GLY SER GLN MET HIS SEQRES 36 B 520 PHE VAL ARG SER ASP GLU LEU ARG GLU ALA TRP ARG ILE SEQRES 37 B 520 PHE THR PRO LEU LEU HIS GLN ILE GLU LEU GLU LYS PRO SEQRES 38 B 520 LYS PRO ILE PRO TYR ILE TYR GLY SER ARG GLY PRO THR SEQRES 39 B 520 GLU ALA ASP GLU LEU MET LYS ARG VAL GLY PHE GLN TYR SEQRES 40 B 520 GLU GLY THR TYR LYS TRP VAL ASN PRO HIS LYS LEU CYS HET NAP A 601 48 HET NAP B 601 48 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 3 NAP 2(C21 H28 N7 O17 P3) FORMUL 5 HOH *36(H2 O) HELIX 1 AA1 GLY A 41 LYS A 47 1 7 HELIX 2 AA2 LYS A 47 ASP A 58 1 12 HELIX 3 AA3 THR A 76 GLU A 85 1 10 HELIX 4 AA4 THR A 91 GLU A 93 5 3 HELIX 5 AA5 GLU A 94 ARG A 104 1 11 HELIX 6 AA6 ASP A 114 ALA A 127 1 14 HELIX 7 AA7 LEU A 130 ALA A 134 5 5 HELIX 8 AA8 VAL A 146 CYS A 158 1 13 HELIX 9 AA9 ASP A 176 SER A 188 1 13 HELIX 10 AB1 ARG A 192 ASP A 194 5 3 HELIX 11 AB2 GLU A 206 GLY A 222 1 17 HELIX 12 AB3 PRO A 223 TRP A 225 5 3 HELIX 13 AB4 ARG A 246 ASP A 251 1 6 HELIX 14 AB5 GLY A 254 VAL A 259 1 6 HELIX 15 AB6 ASN A 262 MET A 273 1 12 HELIX 16 AB7 ASN A 280 CYS A 294 1 15 HELIX 17 AB8 GLN A 299 ASN A 301 5 3 HELIX 18 AB9 ASP A 435 GLY A 447 1 13 HELIX 19 AC1 ARG A 454 LYS A 476 1 23 HELIX 20 AC2 PRO A 489 VAL A 499 1 11 HELIX 21 AC3 GLY B 41 LYS B 47 1 7 HELIX 22 AC4 LYS B 47 ASP B 58 1 12 HELIX 23 AC5 THR B 76 GLN B 83 1 8 HELIX 24 AC6 GLU B 85 LYS B 89 5 5 HELIX 25 AC7 GLU B 94 ALA B 103 1 10 HELIX 26 AC8 ASP B 114 LEU B 128 1 15 HELIX 27 AC9 VAL B 146 CYS B 158 1 13 HELIX 28 AD1 ASP B 176 PHE B 191 1 16 HELIX 29 AD2 ARG B 192 ASP B 194 5 3 HELIX 30 AD3 GLU B 206 GLY B 222 1 17 HELIX 31 AD4 PRO B 223 TRP B 225 5 3 HELIX 32 AD5 ARG B 246 ASP B 251 1 6 HELIX 33 AD6 PHE B 253 VAL B 259 1 7 HELIX 34 AD7 ASN B 262 MET B 273 1 12 HELIX 35 AD8 ASN B 280 CYS B 294 1 15 HELIX 36 AD9 GLN B 299 ASN B 301 5 3 HELIX 37 AE1 GLU B 315 LYS B 320 5 6 HELIX 38 AE2 ALA B 436 CYS B 446 1 11 HELIX 39 AE3 ARG B 454 GLU B 475 1 22 HELIX 40 AE4 THR B 490 VAL B 499 1 10 SHEET 1 AA1 6 ASN A 105 ALA A 109 0 SHEET 2 AA1 6 ASN A 64 ALA A 71 1 N GLY A 69 O VAL A 108 SHEET 3 AA1 6 THR A 31 MET A 37 1 N HIS A 32 O PHE A 66 SHEET 4 AA1 6 ASN A 135 LEU A 140 1 O TYR A 139 N ILE A 35 SHEET 5 AA1 6 ASN A 165 VAL A 169 1 O ILE A 168 N LEU A 140 SHEET 6 AA1 6 ILE A 196 ARG A 198 1 O TYR A 197 N ILE A 167 SHEET 1 AA2 8 TYR A 401 MET A 404 0 SHEET 2 AA2 8 ASN A 388 ARG A 393 -1 N VAL A 391 O TYR A 401 SHEET 3 AA2 8 LYS A 366 PHE A 373 -1 N LEU A 371 O LEU A 390 SHEET 4 AA2 8 ILE A 230 LYS A 238 -1 N ILE A 234 O ARG A 370 SHEET 5 AA2 8 PRO A 353 GLY A 359 1 O ILE A 355 N LEU A 235 SHEET 6 AA2 8 PHE A 337 TYR A 343 -1 N ALA A 338 O CYS A 358 SHEET 7 AA2 8 VAL A 303 VAL A 309 -1 N GLY A 306 O PHE A 337 SHEET 8 AA2 8 ILE A 480 ILE A 483 1 O ILE A 480 N LEU A 305 SHEET 1 AA3 6 ASN B 105 ALA B 109 0 SHEET 2 AA3 6 THR B 65 ALA B 71 1 N GLY B 69 O SER B 106 SHEET 3 AA3 6 HIS B 32 MET B 37 1 N PHE B 34 O VAL B 68 SHEET 4 AA3 6 ASN B 135 LEU B 140 1 O TYR B 139 N ILE B 35 SHEET 5 AA3 6 ASN B 165 VAL B 169 1 O ARG B 166 N PHE B 138 SHEET 6 AA3 6 ILE B 196 ARG B 198 1 O TYR B 197 N ILE B 167 SHEET 1 AA4 8 TYR B 401 MET B 404 0 SHEET 2 AA4 8 ASN B 388 ILE B 392 -1 N VAL B 391 O TYR B 401 SHEET 3 AA4 8 LYS B 366 PHE B 373 -1 N LEU B 371 O LEU B 390 SHEET 4 AA4 8 ILE B 230 LYS B 238 -1 N ALA B 231 O GLN B 372 SHEET 5 AA4 8 PHE B 354 GLY B 359 1 O ILE B 355 N VAL B 233 SHEET 6 AA4 8 PHE B 337 LEU B 342 -1 N VAL B 340 O LEU B 356 SHEET 7 AA4 8 VAL B 303 VAL B 309 -1 N GLY B 306 O PHE B 337 SHEET 8 AA4 8 ILE B 480 ILE B 483 1 O TYR B 482 N GLN B 307 CISPEP 1 LYS A 171 PRO A 172 0 -0.94 CISPEP 2 LYS B 171 PRO B 172 0 -6.99 CRYST1 74.640 87.860 160.680 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013398 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011382 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006224 0.00000