HEADER OXIDOREDUCTASE 30-SEP-21 7SEI TITLE GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE (K403Q) COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: G6PD; COMPND 5 EC: 1.1.1.49; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: G6PD; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: C43; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-28A (+) KEYWDS GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE, K403Q, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR I.I.MATHEWS,A.A.GARCIA,S.WAKATSUKI,D.MOCHLY-ROSEN REVDAT 2 18-OCT-23 7SEI 1 REMARK REVDAT 1 17-AUG-22 7SEI 0 JRNL AUTH A.A.GARCIA,I.I.MATHEWS,N.HORIKOSHI,T.MATSUI,M.KAUR, JRNL AUTH 2 S.WAKATSUKI,D.MOCHLY-ROSEN JRNL TITL STABILIZATION OF GLUCOSE-6-PHOSPHATE DEHYDROGENASE OLIGOMERS JRNL TITL 2 ENHANCES CATALYTIC ACTIVITY AND STABILITY OF CLINICAL JRNL TITL 3 VARIANTS. JRNL REF J.BIOL.CHEM. V. 298 01610 2022 JRNL REFN ESSN 1083-351X JRNL PMID 35065072 JRNL DOI 10.1016/J.JBC.2022.101610 REMARK 2 REMARK 2 RESOLUTION. 3.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.43 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 15658 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 825 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1145 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3510 REMARK 3 BIN FREE R VALUE SET COUNT : 61 REMARK 3 BIN FREE R VALUE : 0.3620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3439 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 120.3 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 138.2 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.03000 REMARK 3 B22 (A**2) : 0.03000 REMARK 3 B33 (A**2) : -0.07000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.015 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.412 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.268 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 19.787 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.932 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.906 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3568 ; 0.007 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 3370 ; 0.001 ; 0.015 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4834 ; 1.733 ; 1.647 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7739 ; 1.222 ; 1.582 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 423 ; 8.735 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 207 ;36.153 ;21.401 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 612 ;20.193 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;18.959 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 454 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4017 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 868 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7SEI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1000260087. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUL-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : FLAT SIDE-DEFLECTING, RH-COATED REMARK 200 SI MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16483 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.650 REMARK 200 RESOLUTION RANGE LOW (A) : 39.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 26.58 REMARK 200 R MERGE (I) : 0.21300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 27.38 REMARK 200 R MERGE FOR SHELL (I) : 2.74500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.650 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6VA8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 79.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG8K, VAPOR DIFFUSION, TEMPERATURE REMARK 280 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.91000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 78.86500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 78.86500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.45500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 78.86500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 78.86500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 85.36500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 78.86500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 78.86500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.45500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 78.86500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 78.86500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 85.36500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 56.91000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLU A 3 REMARK 465 GLN A 4 REMARK 465 VAL A 5 REMARK 465 ALA A 6 REMARK 465 LEU A 7 REMARK 465 SER A 8 REMARK 465 ARG A 9 REMARK 465 THR A 10 REMARK 465 GLN A 11 REMARK 465 VAL A 12 REMARK 465 CYS A 13 REMARK 465 GLY A 14 REMARK 465 ILE A 15 REMARK 465 LEU A 16 REMARK 465 ARG A 17 REMARK 465 GLU A 18 REMARK 465 GLU A 19 REMARK 465 LEU A 20 REMARK 465 PHE A 21 REMARK 465 GLN A 22 REMARK 465 GLY A 23 REMARK 465 ASP A 24 REMARK 465 ALA A 25 REMARK 465 PHE A 26 REMARK 465 HIS A 27 REMARK 465 GLN A 28 REMARK 465 GLY A 378 REMARK 465 ASP A 379 REMARK 465 ILE A 380 REMARK 465 PHE A 381 REMARK 465 HIS A 382 REMARK 465 GLN A 383 REMARK 465 GLN A 384 REMARK 465 CYS A 385 REMARK 465 GLN A 395 REMARK 465 PRO A 396 REMARK 465 ASN A 397 REMARK 465 GLU A 398 REMARK 465 ALA A 399 REMARK 465 VAL A 400 REMARK 465 TYR A 401 REMARK 465 THR A 402 REMARK 465 GLN A 403 REMARK 465 MET A 404 REMARK 465 MET A 405 REMARK 465 THR A 406 REMARK 465 LYS A 407 REMARK 465 LYS A 408 REMARK 465 PRO A 409 REMARK 465 GLY A 410 REMARK 465 MET A 411 REMARK 465 PHE A 412 REMARK 465 PHE A 413 REMARK 465 ASN A 414 REMARK 465 PRO A 415 REMARK 465 GLU A 416 REMARK 465 GLU A 417 REMARK 465 SER A 418 REMARK 465 GLU A 419 REMARK 465 LEU A 420 REMARK 465 ASP A 421 REMARK 465 LEU A 422 REMARK 465 THR A 423 REMARK 465 TYR A 424 REMARK 465 GLY A 425 REMARK 465 ASN A 426 REMARK 465 ARG A 427 REMARK 465 TYR A 428 REMARK 465 LYS A 429 REMARK 465 ASN A 430 REMARK 465 VAL A 431 REMARK 465 LYS A 432 REMARK 465 PHE A 501 REMARK 465 GLN A 502 REMARK 465 TYR A 503 REMARK 465 GLU A 504 REMARK 465 GLY A 505 REMARK 465 THR A 506 REMARK 465 TYR A 507 REMARK 465 LYS A 508 REMARK 465 TRP A 509 REMARK 465 VAL A 510 REMARK 465 ASN A 511 REMARK 465 PRO A 512 REMARK 465 HIS A 513 REMARK 465 LYS A 514 REMARK 465 LEU A 515 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 193 OG SER A 455 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 62 N - CA - CB ANGL. DEV. = -7.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 44 -85.63 -41.66 REMARK 500 PRO A 62 131.12 -21.11 REMARK 500 ARG A 74 93.74 -67.71 REMARK 500 PRO A 92 6.48 -43.90 REMARK 500 ASP A 114 85.54 -155.07 REMARK 500 LEU A 121 -71.35 -70.34 REMARK 500 PHE A 173 39.96 -77.54 REMARK 500 HIS A 201 30.15 -157.27 REMARK 500 ILE A 220 -71.09 -52.44 REMARK 500 GLU A 244 84.20 49.42 REMARK 500 GLU A 252 44.01 -85.69 REMARK 500 PHE A 253 -75.25 -167.35 REMARK 500 VAL A 259 -43.72 -135.26 REMARK 500 ASN A 262 -65.69 -104.65 REMARK 500 SER A 278 -149.72 -143.23 REMARK 500 PRO A 312 -72.20 -46.99 REMARK 500 ASP A 313 31.91 -91.28 REMARK 500 GLU A 317 7.77 -58.17 REMARK 500 ASN A 346 -165.72 -167.60 REMARK 500 TRP A 349 -157.99 -108.94 REMARK 500 ASP A 350 136.26 112.45 REMARK 500 LEU A 362 -164.19 -124.31 REMARK 500 HIS A 374 92.76 -65.45 REMARK 500 ARG A 393 -130.14 -108.84 REMARK 500 ALA A 436 -83.32 61.04 REMARK 500 ARG A 498 -6.96 -51.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 157 CYS A 158 -147.03 REMARK 500 PRO A 434 ASP A 435 -145.48 REMARK 500 REMARK 500 REMARK: NULL DBREF 7SEI A 1 515 UNP P11413 G6PD_HUMAN 1 515 SEQADV 7SEI GLN A 403 UNP P11413 LYS 403 ENGINEERED MUTATION SEQRES 1 A 515 MET ALA GLU GLN VAL ALA LEU SER ARG THR GLN VAL CYS SEQRES 2 A 515 GLY ILE LEU ARG GLU GLU LEU PHE GLN GLY ASP ALA PHE SEQRES 3 A 515 HIS GLN SER ASP THR HIS ILE PHE ILE ILE MET GLY ALA SEQRES 4 A 515 SER GLY ASP LEU ALA LYS LYS LYS ILE TYR PRO THR ILE SEQRES 5 A 515 TRP TRP LEU PHE ARG ASP GLY LEU LEU PRO GLU ASN THR SEQRES 6 A 515 PHE ILE VAL GLY TYR ALA ARG SER ARG LEU THR VAL ALA SEQRES 7 A 515 ASP ILE ARG LYS GLN SER GLU PRO PHE PHE LYS ALA THR SEQRES 8 A 515 PRO GLU GLU LYS LEU LYS LEU GLU ASP PHE PHE ALA ARG SEQRES 9 A 515 ASN SER TYR VAL ALA GLY GLN TYR ASP ASP ALA ALA SER SEQRES 10 A 515 TYR GLN ARG LEU ASN SER HIS MET ASN ALA LEU HIS LEU SEQRES 11 A 515 GLY SER GLN ALA ASN ARG LEU PHE TYR LEU ALA LEU PRO SEQRES 12 A 515 PRO THR VAL TYR GLU ALA VAL THR LYS ASN ILE HIS GLU SEQRES 13 A 515 SER CYS MET SER GLN ILE GLY TRP ASN ARG ILE ILE VAL SEQRES 14 A 515 GLU LYS PRO PHE GLY ARG ASP LEU GLN SER SER ASP ARG SEQRES 15 A 515 LEU SER ASN HIS ILE SER SER LEU PHE ARG GLU ASP GLN SEQRES 16 A 515 ILE TYR ARG ILE ASP HIS TYR LEU GLY LYS GLU MET VAL SEQRES 17 A 515 GLN ASN LEU MET VAL LEU ARG PHE ALA ASN ARG ILE PHE SEQRES 18 A 515 GLY PRO ILE TRP ASN ARG ASP ASN ILE ALA CYS VAL ILE SEQRES 19 A 515 LEU THR PHE LYS GLU PRO PHE GLY THR GLU GLY ARG GLY SEQRES 20 A 515 GLY TYR PHE ASP GLU PHE GLY ILE ILE ARG ASP VAL MET SEQRES 21 A 515 GLN ASN HIS LEU LEU GLN MET LEU CYS LEU VAL ALA MET SEQRES 22 A 515 GLU LYS PRO ALA SER THR ASN SER ASP ASP VAL ARG ASP SEQRES 23 A 515 GLU LYS VAL LYS VAL LEU LYS CYS ILE SER GLU VAL GLN SEQRES 24 A 515 ALA ASN ASN VAL VAL LEU GLY GLN TYR VAL GLY ASN PRO SEQRES 25 A 515 ASP GLY GLU GLY GLU ALA THR LYS GLY TYR LEU ASP ASP SEQRES 26 A 515 PRO THR VAL PRO ARG GLY SER THR THR ALA THR PHE ALA SEQRES 27 A 515 ALA VAL VAL LEU TYR VAL GLU ASN GLU ARG TRP ASP GLY SEQRES 28 A 515 VAL PRO PHE ILE LEU ARG CYS GLY LYS ALA LEU ASN GLU SEQRES 29 A 515 ARG LYS ALA GLU VAL ARG LEU GLN PHE HIS ASP VAL ALA SEQRES 30 A 515 GLY ASP ILE PHE HIS GLN GLN CYS LYS ARG ASN GLU LEU SEQRES 31 A 515 VAL ILE ARG VAL GLN PRO ASN GLU ALA VAL TYR THR GLN SEQRES 32 A 515 MET MET THR LYS LYS PRO GLY MET PHE PHE ASN PRO GLU SEQRES 33 A 515 GLU SER GLU LEU ASP LEU THR TYR GLY ASN ARG TYR LYS SEQRES 34 A 515 ASN VAL LYS LEU PRO ASP ALA TYR GLU ARG LEU ILE LEU SEQRES 35 A 515 ASP VAL PHE CYS GLY SER GLN MET HIS PHE VAL ARG SER SEQRES 36 A 515 ASP GLU LEU ARG GLU ALA TRP ARG ILE PHE THR PRO LEU SEQRES 37 A 515 LEU HIS GLN ILE GLU LEU GLU LYS PRO LYS PRO ILE PRO SEQRES 38 A 515 TYR ILE TYR GLY SER ARG GLY PRO THR GLU ALA ASP GLU SEQRES 39 A 515 LEU MET LYS ARG VAL GLY PHE GLN TYR GLU GLY THR TYR SEQRES 40 A 515 LYS TRP VAL ASN PRO HIS LYS LEU HET NAP A 601 48 HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 2 NAP C21 H28 N7 O17 P3 HELIX 1 AA1 GLY A 41 LYS A 47 1 7 HELIX 2 AA2 LYS A 47 ASP A 58 1 12 HELIX 3 AA3 THR A 76 GLU A 85 1 10 HELIX 4 AA4 PRO A 86 LYS A 89 5 4 HELIX 5 AA5 LEU A 96 ARG A 104 1 9 HELIX 6 AA6 ASP A 114 LEU A 128 1 15 HELIX 7 AA7 LEU A 130 ALA A 134 5 5 HELIX 8 AA8 PRO A 143 THR A 145 5 3 HELIX 9 AA9 VAL A 146 MET A 159 1 14 HELIX 10 AB1 ASP A 176 PHE A 191 1 16 HELIX 11 AB2 ARG A 192 ASP A 194 5 3 HELIX 12 AB3 GLU A 206 PHE A 221 1 16 HELIX 13 AB4 ARG A 246 GLU A 252 1 7 HELIX 14 AB5 GLY A 254 MET A 260 1 7 HELIX 15 AB6 ASN A 262 MET A 273 1 12 HELIX 16 AB7 ASN A 280 CYS A 294 1 15 HELIX 17 AB8 GLN A 299 ASN A 301 5 3 HELIX 18 AB9 ALA A 436 GLY A 447 1 12 HELIX 19 AC1 ARG A 454 LYS A 476 1 23 HELIX 20 AC2 PRO A 489 ARG A 498 1 10 SHEET 1 AA1 6 ASN A 105 ALA A 109 0 SHEET 2 AA1 6 ASN A 64 ALA A 71 1 N GLY A 69 O VAL A 108 SHEET 3 AA1 6 THR A 31 MET A 37 1 N PHE A 34 O PHE A 66 SHEET 4 AA1 6 ASN A 135 LEU A 140 1 O TYR A 139 N ILE A 35 SHEET 5 AA1 6 ASN A 165 GLU A 170 1 O ILE A 168 N PHE A 138 SHEET 6 AA1 6 ILE A 196 ILE A 199 1 O TYR A 197 N ILE A 167 SHEET 1 AA2 7 ASN A 388 ILE A 392 0 SHEET 2 AA2 7 LYS A 366 PHE A 373 -1 N PHE A 373 O ASN A 388 SHEET 3 AA2 7 ILE A 230 LYS A 238 -1 N ILE A 234 O ARG A 370 SHEET 4 AA2 7 PRO A 353 GLY A 359 1 O ILE A 355 N LEU A 235 SHEET 5 AA2 7 PHE A 337 TYR A 343 -1 N LEU A 342 O PHE A 354 SHEET 6 AA2 7 VAL A 303 VAL A 309 -1 N GLY A 306 O PHE A 337 SHEET 7 AA2 7 ILE A 480 ILE A 483 1 O TYR A 482 N VAL A 309 CISPEP 1 LYS A 171 PRO A 172 0 -2.18 CRYST1 157.730 157.730 113.820 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006340 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006340 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008786 0.00000