HEADER PROTEIN TRANSPORT 07-OCT-21 7SH3 TITLE CRYSTAL STRUCTURE OF A VIRB8-LIKE PROTEIN OF TYPE IV SECRETION SYSTEM TITLE 2 FROM RICKETTSIA TYPHI IN COMPLEX WITH A SYNTHETIC VIRB8 MINIPROTEIN TITLE 3 BINDER COMPND MOL_ID: 1; COMPND 2 MOLECULE: SYNTHETIC VIRB8 MINIPROTEIN BINDER; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: VIRB8-LIKE PROTEIN OF TYPE IV SECRETION SYSTEM; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_TAXID: 32630; SOURCE 4 GENE: SYNTHETIC; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: SYCOA.20508.E.PG1; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: RICKETTSIA TYPHI (STRAIN ATCC VR-144 / SOURCE 11 WILMINGTON); SOURCE 12 ORGANISM_TAXID: 257363; SOURCE 13 STRAIN: ATCC VR-144 / WILMINGTON; SOURCE 14 GENE: RT0278; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 16 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 17 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 18 EXPRESSION_SYSTEM_PLASMID: RITYA.18390.A.B2 KEYWDS SSGCID, SYNTHETIC, MINIPROTEIN BINDER, MINIBINDER, VIRB8, STRUCTURAL KEYWDS 2 GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, KEYWDS 3 PROTEIN TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE,SEATTLE AUTHOR 2 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 18-OCT-23 7SH3 1 REMARK REVDAT 1 20-OCT-21 7SH3 0 JRNL AUTH N.D.DEBOUVER,A.K.BERA,D.D.LORIMER,P.S.HORANYI,T.E.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF A VIRB8-LIKE PROTEIN OF TYPE IV JRNL TITL 2 SECRETION SYSTEM FROM RICKETTSIA TYPHI IN COMPLEX WITH A JRNL TITL 3 SYNTHETIC VIRB8 MINIPROTEIN BINDER JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV-4274 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.69 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 6600 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.245 REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.306 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.240 REMARK 3 FREE R VALUE TEST SET COUNT : 676 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.6900 - 5.1300 0.99 1271 139 0.2159 0.2777 REMARK 3 2 5.1300 - 4.0700 1.00 1184 136 0.1975 0.2567 REMARK 3 3 4.0700 - 3.5600 0.99 1182 128 0.2473 0.3437 REMARK 3 4 3.5600 - 3.2300 0.98 1150 138 0.3152 0.3821 REMARK 3 5 3.2300 - 3.0000 0.98 1137 135 0.4025 0.4573 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 43.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 86.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 129.2 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.8519 0.5558 24.4836 REMARK 3 T TENSOR REMARK 3 T11: 1.1202 T22: 2.5606 REMARK 3 T33: 0.6988 T12: -0.2311 REMARK 3 T13: 0.0420 T23: -0.2344 REMARK 3 L TENSOR REMARK 3 L11: 6.7836 L22: 6.2225 REMARK 3 L33: 3.8502 L12: 2.4666 REMARK 3 L13: 0.3083 L23: -1.4892 REMARK 3 S TENSOR REMARK 3 S11: 0.8603 S12: -0.5959 S13: -0.7363 REMARK 3 S21: -0.5020 S22: -0.7584 S23: -0.7551 REMARK 3 S31: -0.3862 S32: 0.3463 S33: -0.3138 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.0659 4.1815 30.5232 REMARK 3 T TENSOR REMARK 3 T11: 1.2632 T22: 2.1342 REMARK 3 T33: 0.9525 T12: -0.1799 REMARK 3 T13: -0.0572 T23: -0.0444 REMARK 3 L TENSOR REMARK 3 L11: 9.2735 L22: 7.0528 REMARK 3 L33: 7.7565 L12: -1.8569 REMARK 3 L13: -6.5094 L23: 1.4160 REMARK 3 S TENSOR REMARK 3 S11: 1.0679 S12: -0.9536 S13: 0.1434 REMARK 3 S21: -0.1919 S22: -0.5767 S23: -1.1213 REMARK 3 S31: -1.5196 S32: 0.6145 S33: -0.5850 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 31 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2511 -8.3275 -1.5994 REMARK 3 T TENSOR REMARK 3 T11: 0.8069 T22: 1.5442 REMARK 3 T33: 1.0400 T12: -0.1256 REMARK 3 T13: -0.0089 T23: -0.1582 REMARK 3 L TENSOR REMARK 3 L11: 4.7129 L22: 9.5397 REMARK 3 L33: 3.9812 L12: -4.8997 REMARK 3 L13: -3.2128 L23: 1.9084 REMARK 3 S TENSOR REMARK 3 S11: -0.8045 S12: -0.6982 S13: -2.2553 REMARK 3 S21: -0.5715 S22: -0.6808 S23: 1.0998 REMARK 3 S31: -0.3716 S32: 0.2540 S33: 0.5756 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 50 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.2626 -0.9828 14.3661 REMARK 3 T TENSOR REMARK 3 T11: 0.8337 T22: 1.2637 REMARK 3 T33: 0.8499 T12: -0.0817 REMARK 3 T13: 0.0091 T23: -0.0572 REMARK 3 L TENSOR REMARK 3 L11: 5.8069 L22: 3.9287 REMARK 3 L33: 6.1529 L12: -1.6580 REMARK 3 L13: 0.8008 L23: 2.8751 REMARK 3 S TENSOR REMARK 3 S11: 0.2931 S12: -0.5262 S13: 0.3505 REMARK 3 S21: 0.2184 S22: -0.6691 S23: -0.6259 REMARK 3 S31: -0.3806 S32: 0.4508 S33: 0.5321 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 87 THROUGH 106 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.8270 2.9513 8.9101 REMARK 3 T TENSOR REMARK 3 T11: 0.7925 T22: 1.6729 REMARK 3 T33: 0.9889 T12: -0.0293 REMARK 3 T13: 0.0316 T23: -0.1544 REMARK 3 L TENSOR REMARK 3 L11: 4.9912 L22: 1.0667 REMARK 3 L33: 7.8114 L12: -0.2156 REMARK 3 L13: -0.5240 L23: 1.4123 REMARK 3 S TENSOR REMARK 3 S11: -0.6956 S12: 0.6338 S13: 0.4858 REMARK 3 S21: 0.0806 S22: 0.0475 S23: 0.5539 REMARK 3 S31: 0.6433 S32: -1.0169 S33: 0.2824 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 107 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.7650 1.2752 1.4040 REMARK 3 T TENSOR REMARK 3 T11: 0.6496 T22: 1.5002 REMARK 3 T33: 0.6139 T12: -0.0983 REMARK 3 T13: -0.0792 T23: -0.0195 REMARK 3 L TENSOR REMARK 3 L11: 8.8412 L22: 8.1885 REMARK 3 L33: 5.8959 L12: -2.3153 REMARK 3 L13: -1.1308 L23: 1.3602 REMARK 3 S TENSOR REMARK 3 S11: 0.3652 S12: 0.8513 S13: 0.9431 REMARK 3 S21: -0.1238 S22: -0.4676 S23: -0.2275 REMARK 3 S31: 0.0866 S32: 1.1313 S33: 0.3824 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7SH3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1000260276. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9787 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6672 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 44.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.897 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.67700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.520 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4O3V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: RITYA.18390.A.B2 + SYCOA.20508.E.PG1 REMARK 280 [BARCODE: 320527G9, PUCKID: OCE7-3, CRYO: 15% EG, CONCENTRATION: REMARK 280 9.9 MG/ML] 100MM SODIUM ACETATE/HYDROCHLORIC ACID PH 4.6, 25% (W/ REMARK 280 V) PEG 4000, 200MM AMMONIUM SULFATE, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z REMARK 290 7555 -X+1/2,Y,-Z REMARK 290 8555 X,-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.63000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.55500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.74000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 77.55500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.63000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 35.74000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 28.63000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.74000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 77.55500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.74000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 28.63000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 77.55500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1460 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 GLY A 2 REMARK 465 GLY A 3 REMARK 465 SER A 67 REMARK 465 MET B -8 REMARK 465 ALA B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 LEU B 1 REMARK 465 PRO B 2 REMARK 465 ILE B 3 REMARK 465 GLN B 4 REMARK 465 LYS B 5 REMARK 465 LYS B 6 REMARK 465 VAL B 7 REMARK 465 GLY B 8 REMARK 465 TYR B 9 REMARK 465 LEU B 10 REMARK 465 ILE B 11 REMARK 465 LYS B 12 REMARK 465 ASP B 13 REMARK 465 ASP B 14 REMARK 465 SER B 15 REMARK 465 GLU B 16 REMARK 465 LYS B 17 REMARK 465 GLN B 18 REMARK 465 ALA B 19 REMARK 465 THR B 20 REMARK 465 ILE B 21 REMARK 465 THR B 22 REMARK 465 ASN B 23 REMARK 465 THR B 24 REMARK 465 LYS B 25 REMARK 465 TYR B 26 REMARK 465 SER B 27 REMARK 465 THR B 28 REMARK 465 LEU B 29 REMARK 465 ALA B 30 REMARK 465 SER B 142A REMARK 465 ILE B 142B REMARK 465 SER B 142C REMARK 465 THR B 142D REMARK 465 SER B 142E REMARK 465 THR B 142F REMARK 465 LEU B 142G REMARK 465 HIS B 142H REMARK 465 ASN B 142I REMARK 465 MET B 142J REMARK 465 PRO B 142K REMARK 465 ARG B 163 REMARK 465 ASN B 164 REMARK 465 LYS B 165 REMARK 465 ASN B 166 REMARK 465 GLN B 167 REMARK 465 GLN B 168 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN B 100 CG OD1 ND2 REMARK 470 GLU B 117 CG CD OE1 OE2 REMARK 470 PHE B 150 CG CD1 CD2 CE1 CE2 CZ REMARK 470 HIS B 151 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 24 -85.17 -96.38 REMARK 500 GLN A 45 0.28 -68.14 REMARK 500 GLN B 92 -123.50 63.99 REMARK 500 ILE B 102 -83.03 -97.09 REMARK 500 LEU B 119 117.41 -169.86 REMARK 500 LEU B 128 -60.32 -106.86 REMARK 500 HIS B 151 81.59 62.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: RITYA.18390.A.B2 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: SYCOA.20508.E.PG1 RELATED DB: TARGETTRACK DBREF 7SH3 A 1 67 PDB 7SH3 7SH3 1 67 DBREF 7SH3 B 1 168 UNP Q68X84 Q68X84_RICTY 61 232 SEQADV 7SH3 MET B -8 UNP Q68X84 EXPRESSION TAG SEQADV 7SH3 ALA B -7 UNP Q68X84 EXPRESSION TAG SEQADV 7SH3 HIS B -6 UNP Q68X84 EXPRESSION TAG SEQADV 7SH3 HIS B -5 UNP Q68X84 EXPRESSION TAG SEQADV 7SH3 HIS B -4 UNP Q68X84 EXPRESSION TAG SEQADV 7SH3 HIS B -3 UNP Q68X84 EXPRESSION TAG SEQADV 7SH3 HIS B -2 UNP Q68X84 EXPRESSION TAG SEQADV 7SH3 HIS B -1 UNP Q68X84 EXPRESSION TAG SEQADV 7SH3 MET B 0 UNP Q68X84 EXPRESSION TAG SEQRES 1 A 67 SER GLY GLY ASN ALA GLU GLU ILE THR GLU LYS ALA THR SEQRES 2 A 67 LEU VAL GLY ILE GLU ALA TRP LEU LEU ALA LYS ASP GLU SEQRES 3 A 67 GLU GLN LYS LYS LYS VAL ARG THR LEU ASN ARG GLN VAL SEQRES 4 A 67 LYS LYS LEU LEU GLN GLN ASN ASP LEU ASP GLN ALA LYS SEQRES 5 A 67 ARG VAL LEU ASP GLN LEU LYS SER VAL LEU GLU ASP LEU SEQRES 6 A 67 LYS SER SEQRES 1 B 181 MET ALA HIS HIS HIS HIS HIS HIS MET LEU PRO ILE GLN SEQRES 2 B 181 LYS LYS VAL GLY TYR LEU ILE LYS ASP ASP SER GLU LYS SEQRES 3 B 181 GLN ALA THR ILE THR ASN THR LYS TYR SER THR LEU ALA SEQRES 4 B 181 ASN PRO TYR ILE SER VAL ALA ASN ILE MET LEU GLN ASN SEQRES 5 B 181 TYR VAL LYS GLN ARG GLU LYS TYR ASN TYR ASP THR LEU SEQRES 6 B 181 LYS GLU GLN PHE THR PHE ILE LYS ASN ALA SER THR SER SEQRES 7 B 181 ILE VAL TYR MET GLN PHE ALA ASN PHE MET ASN ILE ASP SEQRES 8 B 181 ASN SER LEU SER PRO VAL ILE ARG TYR GLN LYS LEU TYR SEQRES 9 B 181 ARG ARG SER ILE ASN ILE ILE SER ILE ASN ASN ILE ASN SEQRES 10 B 181 ASN ASN GLU ALA THR VAL THR PHE GLU SER LEU ALA GLN SEQRES 11 B 181 ASN ASN THR GLY GLU ILE LEU GLU ASN MET LEU TRP GLU SEQRES 12 B 181 ALA LYS ILE GLY PHE ILE MET ASP SER ILE SER THR SER SEQRES 13 B 181 THR LEU HIS ASN MET PRO PHE HIS PHE ILE VAL THR SER SEQRES 14 B 181 TYR LYS LEU LYS LEU LEU ARG ASN LYS ASN GLN GLN HELIX 1 AA1 ASN A 4 ALA A 23 1 20 HELIX 2 AA2 ASP A 25 GLN A 45 1 21 HELIX 3 AA3 ASP A 47 LEU A 65 1 19 HELIX 4 AA4 TYR B 33 LYS B 50 1 18 HELIX 5 AA5 ASN B 52 ASP B 54 5 3 HELIX 6 AA6 THR B 55 SER B 67 1 13 HELIX 7 AA7 THR B 68 ASN B 80 1 13 HELIX 8 AA8 SER B 86 GLN B 92 1 7 SHEET 1 AA1 3 TYR B 95 ASN B 106 0 SHEET 2 AA1 3 GLU B 111 ASN B 122 -1 O THR B 113 N ASN B 105 SHEET 3 AA1 3 ILE B 127 GLU B 129 -1 O LEU B 128 N ALA B 120 SHEET 1 AA2 4 TYR B 95 ASN B 106 0 SHEET 2 AA2 4 GLU B 111 ASN B 122 -1 O THR B 113 N ASN B 105 SHEET 3 AA2 4 LEU B 132 MET B 141 -1 O ALA B 135 N VAL B 114 SHEET 4 AA2 4 PHE B 152 LEU B 161 -1 O LYS B 158 N LYS B 136 CRYST1 57.260 71.480 155.110 90.00 90.00 90.00 I 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017464 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013990 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006447 0.00000