HEADER CELL ADHESION 13-OCT-21 7SIE TITLE STRUCTURE OF AAP A-DOMAIN (RESIDUES 351-605) FROM STAPHYLOCOCCUS TITLE 2 EPIDERMIDIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACCUMULATION ASSOCIATED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: A DOMAIN (UNP RESIDUES 338-608); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS EPIDERMIDIS (STRAIN ATCC 35984 / SOURCE 3 RP62A); SOURCE 4 ORGANISM_TAXID: 176279; SOURCE 5 STRAIN: ATCC 35984 / RP62A; SOURCE 6 GENE: AAP, SERP2398; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS CELL ADHESION, L-TYPE LECTIN, STAPHYLOCOCCUS EPIDERMIDIS EXPDTA X-RAY DIFFRACTION AUTHOR K.E.ATKIN,A.S.BRENTNALL,E.J.DODSON,F.WHELAN,L.CLARK,J.P.TURKENBURG, AUTHOR 2 J.R.POTTS REVDAT 2 03-MAY-23 7SIE 1 JRNL REVDAT 1 19-OCT-22 7SIE 0 SPRSDE 19-OCT-22 7SIE 4CCI JRNL AUTH L.C.CLARK,K.E.ATKIN,F.WHELAN,A.S.BRENTNALL,G.HARRIS, JRNL AUTH 2 A.M.TOWELL,J.P.TURKENBURG,Y.LIU,T.FEIZI,S.C.GRIFFITHS, JRNL AUTH 3 J.A.GEOGHEGAN,J.R.POTTS JRNL TITL STAPHYLOCOCCAL PERISCOPE PROTEINS AAP, SASG, AND PLS PROJECT JRNL TITL 2 NONCANONICAL LEGUME-LIKE LECTIN ADHESIN DOMAINS FROM THE JRNL TITL 3 BACTERIAL SURFACE. JRNL REF J.BIOL.CHEM. V. 299 02936 2023 JRNL REFN ESSN 1083-351X JRNL PMID 36702253 JRNL DOI 10.1016/J.JBC.2023.102936 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 16.53 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 63480 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.101 REMARK 3 R VALUE (WORKING SET) : 0.100 REMARK 3 FREE R VALUE : 0.124 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3351 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4589 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.87 REMARK 3 BIN R VALUE (WORKING SET) : 0.0730 REMARK 3 BIN FREE R VALUE SET COUNT : 234 REMARK 3 BIN FREE R VALUE : 0.1230 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1958 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 383 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.08 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.29000 REMARK 3 B22 (A**2) : -0.11000 REMARK 3 B33 (A**2) : -0.18000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.033 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.033 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.015 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.769 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.980 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.976 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2198 ; 0.020 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 1922 ; 0.001 ; 0.015 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3010 ; 2.070 ; 1.662 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4446 ; 1.624 ; 1.598 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 300 ; 7.599 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 123 ;35.842 ;24.146 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 337 ;11.290 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;20.803 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 288 ; 0.119 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2747 ; 0.014 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 565 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4120 ; 3.567 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 7SIE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1000260241. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100.000 REMARK 200 PH : 5.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9762 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : MIRROR PAIR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66898 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 58.145 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.500 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 34.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.07000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXCD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LICL, 10% PEG6000, 0.1 M SODIUM REMARK 280 ACETATE, PH 5, PH 5.00, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 17.92650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.59900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.34650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.59900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 17.92650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.34650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 338 REMARK 465 PRO A 339 REMARK 465 ALA A 340 REMARK 465 ASP A 341 REMARK 465 SER A 342 REMARK 465 SER A 343 REMARK 465 SER A 344 REMARK 465 ASN A 345 REMARK 465 ASN A 346 REMARK 465 THR A 347 REMARK 465 LYS A 348 REMARK 465 ASN A 349 REMARK 465 THR A 350 REMARK 465 ILE A 351 REMARK 465 ASP A 352 REMARK 465 ALA A 608 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 353 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 369 NE - CZ - NH1 ANGL. DEV. = -3.9 DEGREES REMARK 500 ARG A 453 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ARG A 453 NE - CZ - NH2 ANGL. DEV. = -3.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 453 -156.16 -130.78 REMARK 500 SER A 459 -4.47 76.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 464 0.12 SIDE CHAIN REMARK 500 TYR A 489 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1182 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A1183 DISTANCE = 6.93 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 701 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 466 OD1 REMARK 620 2 ASP A 466 OD2 53.4 REMARK 620 3 GLY A 468 O 81.8 133.0 REMARK 620 4 ASP A 476 OD1 115.8 80.6 139.2 REMARK 620 5 ASP A 476 OD2 146.2 133.2 91.5 52.7 REMARK 620 6 GLN A 481 OE1 75.6 100.3 78.9 71.4 70.7 REMARK 620 7 HOH A 857 O 134.7 94.2 111.2 83.1 78.5 147.9 REMARK 620 8 HOH A 989 O 74.3 77.8 76.6 141.8 136.3 143.4 67.6 REMARK 620 N 1 2 3 4 5 6 7 DBREF 7SIE A 338 608 UNP Q5HKE8 Q5HKE8_STAEQ 338 608 SEQRES 1 A 271 MET PRO ALA ASP SER SER SER ASN ASN THR LYS ASN THR SEQRES 2 A 271 ILE ASP ILE PRO PRO THR THR VAL LYS GLY ARG ASP ASN SEQRES 3 A 271 TYR ASP PHE TYR GLY ARG VAL ASP ILE GLU SER ASN PRO SEQRES 4 A 271 THR ASP LEU ASN ALA THR ASN LEU THR ARG TYR ASN TYR SEQRES 5 A 271 GLY GLN PRO PRO GLY THR THR THR ALA GLY ALA VAL GLN SEQRES 6 A 271 PHE LYS ASN GLN VAL SER PHE ASP LYS ASP PHE ASP PHE SEQRES 7 A 271 ASN ILE ARG VAL ALA ASN ASN ARG GLN SER ASN THR THR SEQRES 8 A 271 GLY ALA ASP GLY TRP GLY PHE MET PHE SER LYS LYS ASP SEQRES 9 A 271 GLY ASP ASP PHE LEU LYS ASN GLY GLY ILE LEU ARG GLU SEQRES 10 A 271 LYS GLY THR PRO SER ALA ALA GLY PHE ARG ILE ASP THR SEQRES 11 A 271 GLY TYR TYR ASN ASN ASP PRO LEU ASP LYS ILE GLN LYS SEQRES 12 A 271 GLN ALA GLY GLN GLY TYR ARG GLY TYR GLY THR PHE VAL SEQRES 13 A 271 LYS ASN ASP SER GLN GLY ASN THR SER LYS VAL GLY SER SEQRES 14 A 271 GLY THR PRO SER THR ASP PHE LEU ASN TYR ALA ASP ASN SEQRES 15 A 271 THR THR ASN ASP LEU ASP GLY LYS PHE HIS GLY GLN LYS SEQRES 16 A 271 LEU ASN ASN VAL ASN LEU LYS TYR ASN ALA SER ASN GLN SEQRES 17 A 271 THR PHE THR ALA THR TYR ALA GLY LYS THR TRP THR ALA SEQRES 18 A 271 THR LEU SER GLU LEU GLY LEU SER PRO THR ASP SER TYR SEQRES 19 A 271 ASN PHE LEU VAL THR SER SER GLN TYR GLY ASN GLY ASN SEQRES 20 A 271 SER GLY THR TYR ALA SER GLY VAL MET ARG ALA ASP LEU SEQRES 21 A 271 ASP GLY ALA THR LEU THR TYR THR PRO LYS ALA HET CA A 701 1 HET CL A 702 1 HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION FORMUL 2 CA CA 2+ FORMUL 3 CL CL 1- FORMUL 4 HOH *383(H2 O) HELIX 1 AA1 GLY A 360 ASP A 362 5 3 HELIX 2 AA2 ASP A 441 GLY A 449 1 9 HELIX 3 AA3 ASP A 473 GLN A 479 1 7 HELIX 4 AA4 THR A 508 ASP A 512 1 5 HELIX 5 AA5 LEU A 560 GLY A 564 1 5 SHEET 1 AA1 6 THR A 356 VAL A 358 0 SHEET 2 AA1 6 THR A 601 TYR A 604 -1 O LEU A 602 N VAL A 358 SHEET 3 AA1 6 PHE A 413 ALA A 420 -1 N ASP A 414 O THR A 603 SHEET 4 AA1 6 MET A 593 ALA A 595 -1 O ARG A 594 N ALA A 420 SHEET 5 AA1 6 LEU A 384 TYR A 387 -1 N TYR A 387 O MET A 593 SHEET 6 AA1 6 VAL A 370 GLU A 373 -1 N GLU A 373 O LEU A 384 SHEET 1 AA2 6 THR A 356 VAL A 358 0 SHEET 2 AA2 6 THR A 601 TYR A 604 -1 O LEU A 602 N VAL A 358 SHEET 3 AA2 6 PHE A 413 ALA A 420 -1 N ASP A 414 O THR A 603 SHEET 4 AA2 6 ASN A 534 ASN A 541 -1 O VAL A 536 N ILE A 417 SHEET 5 AA2 6 THR A 546 TYR A 551 -1 O THR A 548 N LYS A 539 SHEET 6 AA2 6 LYS A 554 THR A 559 -1 O ALA A 558 N PHE A 547 SHEET 1 AA3 7 TYR A 364 GLY A 368 0 SHEET 2 AA3 7 ALA A 398 PHE A 403 -1 O ALA A 400 N TYR A 367 SHEET 3 AA3 7 ASN A 572 SER A 578 -1 O VAL A 575 N VAL A 401 SHEET 4 AA3 7 GLY A 432 SER A 438 -1 N SER A 438 O ASN A 572 SHEET 5 AA3 7 ALA A 461 ASP A 466 -1 O ALA A 461 N PHE A 437 SHEET 6 AA3 7 ARG A 487 ASN A 495 -1 O TYR A 489 N ASP A 466 SHEET 7 AA3 7 THR A 501 VAL A 504 -1 O SER A 502 N LYS A 494 SHEET 1 AA4 7 TYR A 364 GLY A 368 0 SHEET 2 AA4 7 ALA A 398 PHE A 403 -1 O ALA A 400 N TYR A 367 SHEET 3 AA4 7 ASN A 572 SER A 578 -1 O VAL A 575 N VAL A 401 SHEET 4 AA4 7 GLY A 432 SER A 438 -1 N SER A 438 O ASN A 572 SHEET 5 AA4 7 ALA A 461 ASP A 466 -1 O ALA A 461 N PHE A 437 SHEET 6 AA4 7 ARG A 487 ASN A 495 -1 O TYR A 489 N ASP A 466 SHEET 7 AA4 7 PHE A 513 ASN A 515 -1 O LEU A 514 N GLY A 488 LINK OD1 ASP A 466 CA CA A 701 1555 1555 2.44 LINK OD2 ASP A 466 CA CA A 701 1555 1555 2.44 LINK O GLY A 468 CA CA A 701 1555 1555 2.29 LINK OD1 ASP A 476 CA CA A 701 1555 1555 2.46 LINK OD2 ASP A 476 CA CA A 701 1555 1555 2.47 LINK OE1 GLN A 481 CA CA A 701 1555 1555 2.60 LINK CA CA A 701 O HOH A 857 1555 1555 2.41 LINK CA CA A 701 O HOH A 989 1555 1555 2.57 CRYST1 35.853 68.693 109.198 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027892 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014558 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009158 0.00000