HEADER IMMUNE SYSTEM 27-OCT-21 7SN1 TITLE STRUCTURE OF HUMAN SARS-COV-2 NEUTRALIZING ANTIBODY C1C-A3 FAB COMPND MOL_ID: 1; COMPND 2 MOLECULE: NEUTRALIZING ANTIBODY C1C-A3 FAB HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: AMINO ACIDS 1-20 ARE THE HUMAN TPA SIGNAL PEPTIDE, 21- COMPND 6 22 ARE A LINKER, 23-250 ARE THE C1C-A3 FAB HEAVY CHAIN RESIDUES 1-213 COMPND 7 (NOTE INSERTIONS IN CDR LOOPS; NUMBERING SHOULD BE ACCORDING TO THE COMPND 8 PDB FILE).; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: NEUTRALIZING ANTIBODY C1C-A3 FAB LIGHT CHAIN; COMPND 11 CHAIN: L; COMPND 12 ENGINEERED: YES; COMPND 13 OTHER_DETAILS: AMINO ACIDS 1-20 ARE THE HUMAN TPA SIGNAL PEPTIDE, 21- COMPND 14 22 ARE A LINKER, 23-238 ARE THE C1C-A3 FAB LIGHT CHAIN RESIDUES 1-212 COMPND 15 (NOTE INSERTIONS IN CDR LOOPS; NUMBERING SHOULD BE ACCORDING TO THE COMPND 16 PDB FILE). SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IGHV3-33; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK-293 (THERMO FISHER EXPI293F); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PVRC8400; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 GENE: IGKV3-11; SOURCE 17 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 18 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 20 EXPRESSION_SYSTEM_CELL_LINE: HEK-293T (THERMO FISHER EXPI293F); SOURCE 21 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 22 EXPRESSION_SYSTEM_PLASMID: PVRC8400 KEYWDS COVID-19, SARS-COV-2, NEUTRALIZING ANTIBODY, NEUTRALIZATION ESCAPE, KEYWDS 2 IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.PAN,J.ABRAHAM,S.CLARK REVDAT 4 18-OCT-23 7SN1 1 REMARK REVDAT 3 02-FEB-22 7SN1 1 JRNL REVDAT 2 15-DEC-21 7SN1 1 JRNL REVDAT 1 08-DEC-21 7SN1 0 JRNL AUTH K.G.NABEL,S.A.CLARK,S.SHANKAR,J.PAN,L.E.CLARK,P.YANG, JRNL AUTH 2 A.COSCIA,L.G.A.MCKAY,H.H.VARNUM,V.BRUSIC,N.V.TOLAN,G.ZHOU, JRNL AUTH 3 M.DESJARDINS,S.E.TURBETT,S.KANJILAL,A.C.SHERMAN,A.DIGHE, JRNL AUTH 4 R.C.LAROCQUE,E.T.RYAN,C.TYLEK,J.F.COHEN-SOLAL,A.T.DARCY, JRNL AUTH 5 D.TAVELLA,A.CLABBERS,Y.FAN,A.GRIFFITHS,I.R.CORREIA,J.SEAGAL, JRNL AUTH 6 L.R.BADEN,R.C.CHARLES,J.ABRAHAM JRNL TITL STRUCTURAL BASIS FOR CONTINUED ANTIBODY EVASION BY THE JRNL TITL 2 SARS-COV-2 RECEPTOR BINDING DOMAIN. JRNL REF SCIENCE V. 375 L6251 2022 JRNL REFN ESSN 1095-9203 JRNL PMID 34855508 JRNL DOI 10.1126/SCIENCE.ABL6251 REMARK 2 REMARK 2 RESOLUTION. 1.47 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.4 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.47 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 71663 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.850 REMARK 3 FREE R VALUE TEST SET COUNT : 3478 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 26.110 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.47 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.48 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 79.58 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : NULL REMARK 3 BIN R VALUE (WORKING + TEST SET) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2995 REMARK 3 BIN FREE R VALUE : 0.3425 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : 78 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3301 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 604 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 6760 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 12165 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2020 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 1090 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3474 ; 10.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 455 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : 13 ; 1.000 ; HARMONIC REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5743 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.04 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 4.59 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 14.88 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { H|1 - H|17 } REMARK 3 ORIGIN FOR THE GROUP (A): -64.1017 -26.2995 -31.1314 REMARK 3 T TENSOR REMARK 3 T11: -0.0026 T22: -0.0589 REMARK 3 T33: -0.0159 T12: 0.0011 REMARK 3 T13: 0.0044 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 0.254 L22: 0.8771 REMARK 3 L33: 1.3599 L12: -0.1723 REMARK 3 L13: -0.0099 L23: 1.1286 REMARK 3 S TENSOR REMARK 3 S11: 0.0015 S12: -0.0061 S13: -0.0071 REMARK 3 S21: -0.0061 S22: 0.0391 S23: 0.0276 REMARK 3 S31: -0.0071 S32: 0.0276 S33: -0.0406 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { H|18 - H|59 } REMARK 3 ORIGIN FOR THE GROUP (A): -69.8671 -36.1563 -35.2624 REMARK 3 T TENSOR REMARK 3 T11: 0.006 T22: -0.0205 REMARK 3 T33: -0.04 T12: 0.0105 REMARK 3 T13: -0.0008 T23: -0.0038 REMARK 3 L TENSOR REMARK 3 L11: 0.0718 L22: 0.1861 REMARK 3 L33: 0.0426 L12: -0.0928 REMARK 3 L13: 0.0643 L23: -0.0129 REMARK 3 S TENSOR REMARK 3 S11: 0.0373 S12: 0.0165 S13: -0.0438 REMARK 3 S21: 0.0165 S22: -0.0261 S23: -0.0455 REMARK 3 S31: -0.0438 S32: -0.0455 S33: -0.0112 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { H|60 - H|75 } REMARK 3 ORIGIN FOR THE GROUP (A): -75.0955 -31.3718 -34.27 REMARK 3 T TENSOR REMARK 3 T11: -0.0025 T22: -0.0204 REMARK 3 T33: -0.0358 T12: 0.0062 REMARK 3 T13: 0.0026 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 0.3128 L22: 0.1923 REMARK 3 L33: 0.7922 L12: 0.2125 REMARK 3 L13: -0.1614 L23: -0.3079 REMARK 3 S TENSOR REMARK 3 S11: 0.0151 S12: -0.0427 S13: 0.0059 REMARK 3 S21: -0.0427 S22: -0.0983 S23: -0.1013 REMARK 3 S31: 0.0059 S32: -0.1013 S33: 0.0832 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { H|76 - H|111 } REMARK 3 ORIGIN FOR THE GROUP (A): -68.1111 -35.9816 -33.102 REMARK 3 T TENSOR REMARK 3 T11: 0.0049 T22: -0.0268 REMARK 3 T33: -0.0383 T12: 0.006 REMARK 3 T13: 0.005 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.2977 L22: 0.164 REMARK 3 L33: 0.0185 L12: -0.0943 REMARK 3 L13: 0.0864 L23: 0.2527 REMARK 3 S TENSOR REMARK 3 S11: 0.0086 S12: -0.0211 S13: -0.0073 REMARK 3 S21: -0.0211 S22: 0.0187 S23: 0.0016 REMARK 3 S31: -0.0073 S32: 0.0016 S33: -0.0274 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: { H|112 - H|145 } REMARK 3 ORIGIN FOR THE GROUP (A): -46.2775 -23.1229 -9.9597 REMARK 3 T TENSOR REMARK 3 T11: -0.0048 T22: -0.0027 REMARK 3 T33: -0.0528 T12: -0.0355 REMARK 3 T13: -0.0209 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 1.3711 L22: 0.1728 REMARK 3 L33: 0.5858 L12: -0.1558 REMARK 3 L13: 0.7003 L23: -0.0809 REMARK 3 S TENSOR REMARK 3 S11: 0.0284 S12: 0.0087 S13: -0.2155 REMARK 3 S21: 0.0087 S22: -0.0978 S23: 0.078 REMARK 3 S31: -0.2155 S32: 0.078 S33: 0.0694 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: { H|146 - H|191 } REMARK 3 ORIGIN FOR THE GROUP (A): -43.2435 -29.1038 -13.1262 REMARK 3 T TENSOR REMARK 3 T11: -0.0355 T22: 0.0064 REMARK 3 T33: -0.0316 T12: -0.0113 REMARK 3 T13: 0.0043 T23: 0.019 REMARK 3 L TENSOR REMARK 3 L11: 0.7325 L22: 0.1359 REMARK 3 L33: 0.4226 L12: -0.4459 REMARK 3 L13: 0.0014 L23: -0.468 REMARK 3 S TENSOR REMARK 3 S11: -0.0153 S12: -0.0542 S13: -0.0358 REMARK 3 S21: -0.0542 S22: -0.0984 S23: 0.0448 REMARK 3 S31: -0.0358 S32: 0.0448 S33: 0.1137 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: { H|192 - H|213 } REMARK 3 ORIGIN FOR THE GROUP (A): -39.2194 -21.1492 -15.9472 REMARK 3 T TENSOR REMARK 3 T11: 0.0164 T22: 0.0768 REMARK 3 T33: -0.0083 T12: -0.0562 REMARK 3 T13: 0.0029 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 14.2745 L22: 0.0374 REMARK 3 L33: 2.3566 L12: -0.5487 REMARK 3 L13: 5.8171 L23: -1.0121 REMARK 3 S TENSOR REMARK 3 S11: 0.07 S12: -0.1702 S13: -0.527 REMARK 3 S21: -0.1702 S22: -0.3768 S23: 0.3136 REMARK 3 S31: -0.527 S32: 0.3136 S33: 0.3068 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: { L|1 - L|18 } REMARK 3 ORIGIN FOR THE GROUP (A): -59.8141 -55.2291 -18.5121 REMARK 3 T TENSOR REMARK 3 T11: -0.0119 T22: -0.0281 REMARK 3 T33: -0.0126 T12: -0.0061 REMARK 3 T13: -0.0486 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 3.7216 L22: 0.1145 REMARK 3 L33: -0.2423 L12: 0.8184 REMARK 3 L13: 0.5404 L23: 0.6063 REMARK 3 S TENSOR REMARK 3 S11: 0.1559 S12: 0.1472 S13: -0.0158 REMARK 3 S21: 0.1472 S22: 0.0119 S23: -0.0954 REMARK 3 S31: -0.0158 S32: -0.0954 S33: -0.1678 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: { L|19 - L|98 } REMARK 3 ORIGIN FOR THE GROUP (A): -62.9045 -52.9767 -27.9883 REMARK 3 T TENSOR REMARK 3 T11: -0.0226 T22: -0.0202 REMARK 3 T33: -0.0188 T12: -0.0021 REMARK 3 T13: -0.0039 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 0.5281 L22: 0.0973 REMARK 3 L33: 0.1128 L12: 0.2003 REMARK 3 L13: 0.1848 L23: -0.0241 REMARK 3 S TENSOR REMARK 3 S11: 0.0021 S12: 0.0181 S13: 0.0135 REMARK 3 S21: 0.0181 S22: -0.0113 S23: 0.0002 REMARK 3 S31: 0.0135 S32: 0.0002 S33: 0.0092 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: { L|99 - L|137 } REMARK 3 ORIGIN FOR THE GROUP (A): -46.5761 -36.6412 -5.3955 REMARK 3 T TENSOR REMARK 3 T11: -0.0124 T22: -0.0129 REMARK 3 T33: -0.0866 T12: -0.0227 REMARK 3 T13: 0.0093 T23: 0.0123 REMARK 3 L TENSOR REMARK 3 L11: 0.7236 L22: 0.051 REMARK 3 L33: 1.5994 L12: -0.7451 REMARK 3 L13: 0.3708 L23: 0.4948 REMARK 3 S TENSOR REMARK 3 S11: -0.032 S12: -0.0262 S13: -0.1256 REMARK 3 S21: -0.0262 S22: 0.156 S23: 0.1327 REMARK 3 S31: -0.1256 S32: 0.1327 S33: -0.124 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: { L|138 - L|150 } REMARK 3 ORIGIN FOR THE GROUP (A): -49.8586 -40.9754 -0.1818 REMARK 3 T TENSOR REMARK 3 T11: -0.0084 T22: 0.0115 REMARK 3 T33: -0.0559 T12: -0.0253 REMARK 3 T13: 0.0122 T23: 0.0038 REMARK 3 L TENSOR REMARK 3 L11: 0.1973 L22: 1.0197 REMARK 3 L33: 1.6494 L12: -0.8131 REMARK 3 L13: -0.2787 L23: 1.3838 REMARK 3 S TENSOR REMARK 3 S11: 0.0297 S12: 0.0238 S13: 0.0425 REMARK 3 S21: 0.0238 S22: -0.017 S23: -0.0658 REMARK 3 S31: 0.0425 S32: -0.0658 S33: -0.0127 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: { L|151 - L|163 } REMARK 3 ORIGIN FOR THE GROUP (A): -54.5272 -32.3028 3.5309 REMARK 3 T TENSOR REMARK 3 T11: -0.0183 T22: 0.047 REMARK 3 T33: -0.0917 T12: -0.002 REMARK 3 T13: -0.0031 T23: -0.0009 REMARK 3 L TENSOR REMARK 3 L11: -0.4174 L22: 0.2434 REMARK 3 L33: 5.2838 L12: -0.3664 REMARK 3 L13: -0.2514 L23: 0.8659 REMARK 3 S TENSOR REMARK 3 S11: -0.0195 S12: 0.0009 S13: 0.0965 REMARK 3 S21: 0.0009 S22: 0.0873 S23: -0.2421 REMARK 3 S31: 0.0965 S32: -0.2421 S33: -0.0678 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: { L|164 - L|212 } REMARK 3 ORIGIN FOR THE GROUP (A): -46.7523 -32.8035 2.6756 REMARK 3 T TENSOR REMARK 3 T11: -0.0094 T22: 0.065 REMARK 3 T33: -0.0423 T12: 0.0017 REMARK 3 T13: 0.0153 T23: 0.0149 REMARK 3 L TENSOR REMARK 3 L11: 1.7859 L22: 2.8489 REMARK 3 L33: 3.6483 L12: -0.7381 REMARK 3 L13: 0.1852 L23: 1.0985 REMARK 3 S TENSOR REMARK 3 S11: -0.0774 S12: 0.1161 S13: -0.4223 REMARK 3 S21: 0.1161 S22: 0.2121 S23: 0.1285 REMARK 3 S31: -0.4223 S32: 0.1285 S33: -0.1347 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7SN1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1000257508. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-FEB-21 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.5-8.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979180 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20200131 REMARK 200 DATA SCALING SOFTWARE : XDS 20200131 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 137494 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.467 REMARK 200 RESOLUTION RANGE LOW (A) : 200.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 2.190 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.4500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.47 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.17 REMARK 200 R MERGE FOR SHELL (I) : 0.93400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.140 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: COMPOSITE MODEL GENERATED FROM HEAVY AND LIGHT REMARK 200 CHAINS FROM PDB CODES 4DGV AND 4PTU, RESPECTIVELY. REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG 8000, 0.02 M MAGNESIUM REMARK 280 CHLORIDE HEXAHYDRATE, AND 0.1 M TRIS PH 8.9, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 26.18450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET H -21 REMARK 465 LYS H -20 REMARK 465 ARG H -19 REMARK 465 GLY H -18 REMARK 465 LEU H -17 REMARK 465 CYS H -16 REMARK 465 CYS H -15 REMARK 465 VAL H -14 REMARK 465 LEU H -13 REMARK 465 LEU H -12 REMARK 465 LEU H -11 REMARK 465 CYS H -10 REMARK 465 GLY H -9 REMARK 465 ALA H -8 REMARK 465 VAL H -7 REMARK 465 PHE H -6 REMARK 465 VAL H -5 REMARK 465 SER H -4 REMARK 465 PRO H -3 REMARK 465 SER H -2 REMARK 465 ALA H -1 REMARK 465 SER H 0 REMARK 465 SER H 127 REMARK 465 SER H 128 REMARK 465 LYS H 129 REMARK 465 SER H 130 REMARK 465 THR H 131 REMARK 465 SER H 132 REMARK 465 GLY H 133 REMARK 465 LYS H 214 REMARK 465 SER H 215 REMARK 465 CYS H 216 REMARK 465 ASP H 217 REMARK 465 ARG H 218 REMARK 465 MET L -21 REMARK 465 LYS L -20 REMARK 465 ARG L -19 REMARK 465 GLY L -18 REMARK 465 LEU L -17 REMARK 465 CYS L -16 REMARK 465 CYS L -15 REMARK 465 VAL L -14 REMARK 465 LEU L -13 REMARK 465 LEU L -12 REMARK 465 LEU L -11 REMARK 465 CYS L -10 REMARK 465 GLY L -9 REMARK 465 ALA L -8 REMARK 465 VAL L -7 REMARK 465 PHE L -6 REMARK 465 VAL L -5 REMARK 465 SER L -4 REMARK 465 PRO L -3 REMARK 465 SER L -2 REMARK 465 ALA L -1 REMARK 465 SER L 0 REMARK 465 GLU L 213 REMARK 465 CYS L 214 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU L 79 CG CD OE1 OE2 REMARK 470 GLU L 81 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG SER L 12 OE2 GLU L 105 1.60 REMARK 500 O HOH L 469 O HOH L 529 1.88 REMARK 500 O HOH L 469 O HOH L 475 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG H 100D -49.86 -150.11 REMARK 500 SER L 30 -127.86 57.34 REMARK 500 ALA L 51 -37.19 67.48 REMARK 500 ARG L 211 155.66 144.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH H 613 DISTANCE = 6.41 ANGSTROMS DBREF 7SN1 H -21 218 PDB 7SN1 7SN1 -21 218 DBREF 7SN1 L -21 214 PDB 7SN1 7SN1 -21 214 SEQRES 1 H 250 MET LYS ARG GLY LEU CYS CYS VAL LEU LEU LEU CYS GLY SEQRES 2 H 250 ALA VAL PHE VAL SER PRO SER ALA SER GLN VAL GLN LEU SEQRES 3 H 250 VAL GLU SER GLY GLY GLY VAL VAL GLN PRO GLY ARG SER SEQRES 4 H 250 LEU ARG LEU SER CYS ALA ALA SER GLY PHE THR PHE SER SEQRES 5 H 250 SER TYR GLY MET HIS TRP VAL ARG GLN ALA PRO GLY LYS SEQRES 6 H 250 GLY LEU GLU TRP VAL ALA VAL ILE TRP TYR ASP GLY THR SEQRES 7 H 250 ASN THR TYR TYR ALA ASP SER VAL LYS GLY ARG PHE THR SEQRES 8 H 250 ILE SER ARG ASP ASN SER LYS ASN THR LEU TYR LEU GLN SEQRES 9 H 250 MET ASN SER LEU ARG ALA GLU ASP THR ALA VAL TYR TYR SEQRES 10 H 250 CYS ALA ARG ASP LEU ALA TYR ARG ASP TYR VAL TRP ARG SEQRES 11 H 250 TYR PHE ASP LEU TRP GLY ARG GLY THR LEU VAL THR VAL SEQRES 12 H 250 SER GLY ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU SEQRES 13 H 250 ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA ALA SEQRES 14 H 250 LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL SEQRES 15 H 250 THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY VAL SEQRES 16 H 250 HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SEQRES 17 H 250 SER LEU SER SER VAL VAL THR VAL PRO SER SER SER LEU SEQRES 18 H 250 GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SEQRES 19 H 250 SER ASN THR LYS VAL ASP LYS ARG VAL GLU PRO LYS SER SEQRES 20 H 250 CYS ASP ARG SEQRES 1 L 238 MET LYS ARG GLY LEU CYS CYS VAL LEU LEU LEU CYS GLY SEQRES 2 L 238 ALA VAL PHE VAL SER PRO SER ALA SER GLU ILE VAL LEU SEQRES 3 L 238 THR GLN SER PRO ALA THR LEU SER LEU SER PRO GLY GLU SEQRES 4 L 238 ARG ALA THR LEU SER CYS ARG ALA SER GLN SER VAL SER SEQRES 5 L 238 THR TYR LEU ALA TRP TYR GLN GLN LYS PHE GLY GLN ALA SEQRES 6 L 238 PRO ARG LEU LEU ILE TYR ASP ALA SER ASN ARG ALA THR SEQRES 7 L 238 GLY ILE PRO ALA ARG PHE SER GLY SER GLY SER GLY THR SEQRES 8 L 238 ASP PHE THR LEU THR ILE SER SER LEU GLU PRO GLU ASP SEQRES 9 L 238 PHE ALA VAL TYR TYR CYS GLN CYS ARG SER ASN TRP PRO SEQRES 10 L 238 PRO GLY ILE THR PHE GLY GLN GLY THR ARG LEU GLU ILE SEQRES 11 L 238 LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE PHE PRO SEQRES 12 L 238 PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SER VAL SEQRES 13 L 238 VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA LYS SEQRES 14 L 238 VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER GLY ASN SEQRES 15 L 238 SER GLN GLU SER VAL THR GLU GLN ASP SER LYS ASP SER SEQRES 16 L 238 THR TYR SER LEU SER SER THR LEU THR LEU SER LYS ALA SEQRES 17 L 238 ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL THR SEQRES 18 L 238 HIS GLN GLY LEU SER SER PRO VAL THR LYS SER PHE ASN SEQRES 19 L 238 ARG GLY GLU CYS FORMUL 3 HOH *604(H2 O) HELIX 1 AA1 THR H 28 SER H 30 5 3 HELIX 2 AA2 ASN H 73 LYS H 75 5 3 HELIX 3 AA3 ARG H 83 THR H 87 5 5 HELIX 4 AA4 SER H 156 ALA H 158 5 3 HELIX 5 AA5 SER H 187 GLN H 192 1 6 HELIX 6 AA6 LYS H 201 ASN H 204 5 4 HELIX 7 AA7 GLU L 79 PHE L 83 5 5 HELIX 8 AA8 SER L 121 LYS L 126 1 6 HELIX 9 AA9 LYS L 183 GLU L 187 1 5 SHEET 1 AA1 4 GLN H 3 SER H 7 0 SHEET 2 AA1 4 LEU H 18 SER H 25 -1 O SER H 21 N SER H 7 SHEET 3 AA1 4 THR H 77 MET H 82 -1 O LEU H 80 N LEU H 20 SHEET 4 AA1 4 PHE H 67 ASP H 72 -1 N SER H 70 O TYR H 79 SHEET 1 AA2 6 GLY H 10 VAL H 12 0 SHEET 2 AA2 6 THR H 107 VAL H 111 1 O THR H 110 N GLY H 10 SHEET 3 AA2 6 ALA H 88 TYR H 98 -1 N TYR H 90 O THR H 107 SHEET 4 AA2 6 TYR H 32 GLN H 39 -1 N VAL H 37 O TYR H 91 SHEET 5 AA2 6 LEU H 45 ILE H 51 -1 O GLU H 46 N ARG H 38 SHEET 6 AA2 6 THR H 57 TYR H 59 -1 O TYR H 58 N VAL H 50 SHEET 1 AA3 4 GLY H 10 VAL H 12 0 SHEET 2 AA3 4 THR H 107 VAL H 111 1 O THR H 110 N GLY H 10 SHEET 3 AA3 4 ALA H 88 TYR H 98 -1 N TYR H 90 O THR H 107 SHEET 4 AA3 4 PHE H 100F TRP H 103 -1 O LEU H 102 N ARG H 94 SHEET 1 AA4 4 SER H 120 LEU H 124 0 SHEET 2 AA4 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA4 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 AA4 4 VAL H 163 THR H 165 -1 N HIS H 164 O VAL H 181 SHEET 1 AA5 4 SER H 120 LEU H 124 0 SHEET 2 AA5 4 THR H 135 TYR H 145 -1 O LEU H 141 N PHE H 122 SHEET 3 AA5 4 TYR H 176 PRO H 185 -1 O LEU H 178 N VAL H 142 SHEET 4 AA5 4 VAL H 169 LEU H 170 -1 N VAL H 169 O SER H 177 SHEET 1 AA6 3 THR H 151 TRP H 154 0 SHEET 2 AA6 3 ILE H 195 HIS H 200 -1 O ASN H 197 N SER H 153 SHEET 3 AA6 3 THR H 205 ARG H 210 -1 O LYS H 209 N CYS H 196 SHEET 1 AA7 4 LEU L 4 SER L 7 0 SHEET 2 AA7 4 ALA L 19 ALA L 25 -1 O ARG L 24 N THR L 5 SHEET 3 AA7 4 ASP L 70 ILE L 75 -1 O LEU L 73 N LEU L 21 SHEET 4 AA7 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AA8 6 THR L 10 LEU L 13 0 SHEET 2 AA8 6 THR L 102 ILE L 106 1 O GLU L 105 N LEU L 13 SHEET 3 AA8 6 VAL L 85 SER L 92 -1 N TYR L 86 O THR L 102 SHEET 4 AA8 6 ALA L 34 GLN L 38 -1 N GLN L 38 O VAL L 85 SHEET 5 AA8 6 ARG L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AA8 6 ASN L 53 ARG L 54 -1 O ASN L 53 N TYR L 49 SHEET 1 AA9 4 THR L 10 LEU L 13 0 SHEET 2 AA9 4 THR L 102 ILE L 106 1 O GLU L 105 N LEU L 13 SHEET 3 AA9 4 VAL L 85 SER L 92 -1 N TYR L 86 O THR L 102 SHEET 4 AA9 4 GLY L 95B PHE L 98 -1 O GLY L 95B N SER L 92 SHEET 1 AB1 4 SER L 114 PHE L 118 0 SHEET 2 AB1 4 THR L 129 PHE L 139 -1 O ASN L 137 N SER L 114 SHEET 3 AB1 4 TYR L 173 SER L 182 -1 O LEU L 181 N ALA L 130 SHEET 4 AB1 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AB2 4 ALA L 153 LEU L 154 0 SHEET 2 AB2 4 LYS L 145 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AB2 4 VAL L 191 THR L 197 -1 O GLU L 195 N GLN L 147 SHEET 4 AB2 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SSBOND 1 CYS H 22 CYS H 92 1555 1555 2.05 SSBOND 2 CYS H 140 CYS H 196 1555 1555 2.03 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.12 SSBOND 4 CYS L 134 CYS L 194 1555 1555 2.02 CISPEP 1 PHE H 146 PRO H 147 0 -13.05 CISPEP 2 GLU H 148 PRO H 149 0 -0.02 CISPEP 3 SER L 7 PRO L 8 0 -10.79 CISPEP 4 SER L 7 PRO L 8 0 -2.73 CISPEP 5 TRP L 94 PRO L 95 0 -3.50 CISPEP 6 TYR L 140 PRO L 141 0 0.17 CRYST1 62.736 52.369 71.394 90.00 113.69 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015940 0.000000 0.006994 0.00000 SCALE2 0.000000 0.019095 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015296 0.00000