HEADER PEPTIDE BINDING PROTEIN 27-OCT-21 7SN6 TITLE U2AF65 UHM BOUND TO SF3B155 ULM5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPLICING FACTOR U2AF 65 KDA SUBUNIT; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: U2 AUXILIARY FACTOR 65 KDA SUBUNIT,HU2AF(65),HU2AF65,U2 COMPND 5 SNRNP AUXILIARY FACTOR LARGE SUBUNIT; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: SPLICING FACTOR 3B SUBUNIT 1; COMPND 9 CHAIN: C, D; COMPND 10 SYNONYM: PRE-MRNA-SPLICING FACTOR SF3B 155 KDA SUBUNIT,SF3B155, COMPND 11 SPLICEOSOME-ASSOCIATED PROTEIN 155,SAP 155; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: U2AF2, U2AF65; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX-6P; SOURCE 10 MOL_ID: 2; SOURCE 11 SYNTHETIC: YES; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606 KEYWDS U2AF HOMOLOGY MOTIF, UHM, PRE-MRNA SPLICING FACTOR, PROTEIN BINDING, KEYWDS 2 PHOSPHORYLATION, PROTEIN-PEPTIDE COMPLEX, SPLICING, PEPTIDE BINDING KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.LOERCH,J.L.JENKINS,C.L.KIELKOPF REVDAT 3 18-OCT-23 7SN6 1 REMARK REVDAT 2 24-AUG-22 7SN6 1 JRNL REVDAT 1 27-JUL-22 7SN6 0 JRNL AUTH J.W.GALARDI,V.N.BELA,N.JEFFERY,X.HE,E.GLASSER,S.LOERCH, JRNL AUTH 2 J.L.JENKINS,M.J.PULVINO,P.L.BOUTZ,C.L.KIELKOPF JRNL TITL A UHM-ULM INTERFACE WITH UNUSUAL STRUCTURAL FEATURES JRNL TITL 2 CONTRIBUTES TO U2AF2 AND SF3B1 ASSOCIATION FOR PRE-MRNA JRNL TITL 3 SPLICING. JRNL REF J.BIOL.CHEM. V. 298 02224 2022 JRNL REFN ESSN 1083-351X JRNL PMID 35780835 JRNL DOI 10.1016/J.JBC.2022.102224 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17.1_3660 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.97 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 21305 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.430 REMARK 3 FREE R VALUE TEST SET COUNT : 2008 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.9700 - 4.3400 0.98 1413 152 0.1629 0.1839 REMARK 3 2 4.3400 - 3.4400 0.97 1373 144 0.1487 0.1893 REMARK 3 3 3.4400 - 3.0100 0.99 1392 139 0.1830 0.2091 REMARK 3 4 3.0100 - 2.7300 0.99 1380 152 0.1923 0.2441 REMARK 3 5 2.7300 - 2.5400 0.98 1404 135 0.1955 0.2342 REMARK 3 6 2.5400 - 2.3900 0.98 1371 141 0.1977 0.2390 REMARK 3 7 2.3900 - 2.2700 0.99 1377 147 0.1951 0.2159 REMARK 3 8 2.2700 - 2.1700 0.99 1366 149 0.2016 0.2613 REMARK 3 9 2.1700 - 2.0900 0.99 1401 128 0.2036 0.2461 REMARK 3 10 2.0900 - 2.0100 0.98 1370 159 0.2057 0.2865 REMARK 3 11 2.0100 - 1.9500 0.97 1347 135 0.2120 0.2947 REMARK 3 12 1.9500 - 1.9000 0.98 1362 128 0.2306 0.2986 REMARK 3 13 1.9000 - 1.8500 0.98 1373 156 0.2566 0.3170 REMARK 3 14 1.8500 - 1.8000 0.97 1368 143 0.2504 0.2518 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 372 THROUGH 391 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.0533 -28.1632 17.9197 REMARK 3 T TENSOR REMARK 3 T11: 0.2924 T22: 0.3392 REMARK 3 T33: 0.3404 T12: 0.0755 REMARK 3 T13: 0.0063 T23: 0.0240 REMARK 3 L TENSOR REMARK 3 L11: 3.1616 L22: 3.5298 REMARK 3 L33: 2.0321 L12: -0.8107 REMARK 3 L13: -0.7004 L23: -2.3193 REMARK 3 S TENSOR REMARK 3 S11: 0.2622 S12: 0.3195 S13: 0.0876 REMARK 3 S21: -0.1772 S22: 0.1270 S23: 0.1684 REMARK 3 S31: -0.1204 S32: 0.1655 S33: -0.0019 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 392 THROUGH 408 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0478 -37.3973 18.4014 REMARK 3 T TENSOR REMARK 3 T11: 0.4325 T22: 0.3944 REMARK 3 T33: 0.5062 T12: -0.0636 REMARK 3 T13: -0.0669 T23: 0.0227 REMARK 3 L TENSOR REMARK 3 L11: 1.4031 L22: 0.8707 REMARK 3 L33: 1.1375 L12: 0.2283 REMARK 3 L13: -0.7421 L23: 0.3308 REMARK 3 S TENSOR REMARK 3 S11: 0.1377 S12: 0.3246 S13: -0.7868 REMARK 3 S21: -0.1994 S22: 0.0445 S23: 0.2722 REMARK 3 S31: 1.3871 S32: -0.7430 S33: -0.0016 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 409 THROUGH 431 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4489 -26.5257 16.6419 REMARK 3 T TENSOR REMARK 3 T11: 0.2632 T22: 0.3941 REMARK 3 T33: 0.4186 T12: 0.1038 REMARK 3 T13: -0.0337 T23: 0.0709 REMARK 3 L TENSOR REMARK 3 L11: 3.0172 L22: 3.9774 REMARK 3 L33: 2.2132 L12: -0.1207 REMARK 3 L13: 0.0097 L23: 1.0299 REMARK 3 S TENSOR REMARK 3 S11: 0.5117 S12: 0.5259 S13: 0.0601 REMARK 3 S21: -0.1552 S22: -0.1042 S23: 0.6706 REMARK 3 S31: -0.6881 S32: -0.4516 S33: 0.0329 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 432 THROUGH 449 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9014 -29.7042 31.0164 REMARK 3 T TENSOR REMARK 3 T11: 0.3479 T22: 0.2978 REMARK 3 T33: 0.3043 T12: 0.0989 REMARK 3 T13: 0.0978 T23: 0.0782 REMARK 3 L TENSOR REMARK 3 L11: 0.4518 L22: 2.0089 REMARK 3 L33: 0.6733 L12: 0.3285 REMARK 3 L13: 0.5367 L23: 0.1225 REMARK 3 S TENSOR REMARK 3 S11: 0.1351 S12: -0.2156 S13: -0.2122 REMARK 3 S21: 0.9369 S22: 0.2014 S23: 0.3170 REMARK 3 S31: -0.1875 S32: -0.1320 S33: 0.0548 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 450 THROUGH 459 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.7557 -36.2026 18.9839 REMARK 3 T TENSOR REMARK 3 T11: 0.4420 T22: 0.3360 REMARK 3 T33: 0.2940 T12: 0.1421 REMARK 3 T13: -0.0310 T23: -0.0331 REMARK 3 L TENSOR REMARK 3 L11: 0.4418 L22: 0.6283 REMARK 3 L33: 0.5242 L12: -0.1328 REMARK 3 L13: -0.0958 L23: -0.2074 REMARK 3 S TENSOR REMARK 3 S11: 0.3137 S12: 0.3249 S13: 0.0862 REMARK 3 S21: -0.3645 S22: -0.3945 S23: 0.2323 REMARK 3 S31: 1.2195 S32: 0.1874 S33: -0.0032 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 460 THROUGH 465 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5012 -23.1235 26.0575 REMARK 3 T TENSOR REMARK 3 T11: 0.4115 T22: 0.3276 REMARK 3 T33: 0.3685 T12: 0.0650 REMARK 3 T13: 0.1043 T23: 0.0428 REMARK 3 L TENSOR REMARK 3 L11: 0.1251 L22: 0.8254 REMARK 3 L33: 0.2125 L12: -0.1904 REMARK 3 L13: 0.1407 L23: -0.0470 REMARK 3 S TENSOR REMARK 3 S11: 0.1942 S12: 0.3847 S13: 0.0213 REMARK 3 S21: 0.2160 S22: 0.2121 S23: 0.8776 REMARK 3 S31: -0.9513 S32: -0.0353 S33: 0.0095 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 466 THROUGH 475 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.6083 -17.2938 22.8236 REMARK 3 T TENSOR REMARK 3 T11: 0.6209 T22: 0.6745 REMARK 3 T33: 0.6873 T12: 0.3490 REMARK 3 T13: 0.3195 T23: 0.2874 REMARK 3 L TENSOR REMARK 3 L11: 1.2766 L22: 1.0390 REMARK 3 L33: 7.6820 L12: -0.6023 REMARK 3 L13: -1.2323 L23: 2.7910 REMARK 3 S TENSOR REMARK 3 S11: 0.1372 S12: -0.5314 S13: 0.1816 REMARK 3 S21: 0.6840 S22: 0.8027 S23: 0.5594 REMARK 3 S31: -1.7471 S32: -0.9475 S33: 0.1169 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 371 THROUGH 385 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.9780 -32.7651 9.5395 REMARK 3 T TENSOR REMARK 3 T11: 0.4551 T22: 0.4736 REMARK 3 T33: 0.3207 T12: 0.1353 REMARK 3 T13: 0.0155 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 2.5072 L22: 1.3599 REMARK 3 L33: 0.8836 L12: 1.5131 REMARK 3 L13: -0.6527 L23: 0.1723 REMARK 3 S TENSOR REMARK 3 S11: 0.2643 S12: -0.1825 S13: -0.4576 REMARK 3 S21: 0.0275 S22: 0.0431 S23: 0.2796 REMARK 3 S31: 0.4159 S32: 0.0763 S33: 0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 386 THROUGH 408 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.1092 -23.3998 -2.5552 REMARK 3 T TENSOR REMARK 3 T11: 0.4253 T22: 0.4464 REMARK 3 T33: 0.4703 T12: 0.0322 REMARK 3 T13: 0.0193 T23: 0.0263 REMARK 3 L TENSOR REMARK 3 L11: 1.5947 L22: 2.6945 REMARK 3 L33: 1.6558 L12: -0.4453 REMARK 3 L13: -0.6494 L23: 0.0681 REMARK 3 S TENSOR REMARK 3 S11: -0.2787 S12: 0.3627 S13: 0.7876 REMARK 3 S21: -0.3601 S22: -0.1034 S23: -0.3163 REMARK 3 S31: -0.4153 S32: 0.2133 S33: -0.0036 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 409 THROUGH 416 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.6279 -28.7889 5.4805 REMARK 3 T TENSOR REMARK 3 T11: 0.3952 T22: 0.6313 REMARK 3 T33: 0.3762 T12: -0.0140 REMARK 3 T13: 0.0691 T23: -0.0228 REMARK 3 L TENSOR REMARK 3 L11: 0.8130 L22: 1.7172 REMARK 3 L33: 0.2027 L12: -1.1821 REMARK 3 L13: 0.4045 L23: -0.5888 REMARK 3 S TENSOR REMARK 3 S11: -0.4378 S12: -0.0689 S13: 0.2605 REMARK 3 S21: 0.2136 S22: -0.2243 S23: -0.6346 REMARK 3 S31: 0.2458 S32: -0.0531 S33: -0.0440 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 417 THROUGH 438 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.2002 -34.6313 -1.7000 REMARK 3 T TENSOR REMARK 3 T11: 0.3294 T22: 0.3512 REMARK 3 T33: 0.3024 T12: 0.1092 REMARK 3 T13: 0.0309 T23: 0.0231 REMARK 3 L TENSOR REMARK 3 L11: 0.7716 L22: 3.3534 REMARK 3 L33: 1.5755 L12: -0.1538 REMARK 3 L13: -0.8306 L23: -0.4969 REMARK 3 S TENSOR REMARK 3 S11: 0.0708 S12: -0.4051 S13: -0.1377 REMARK 3 S21: -0.0232 S22: 0.0437 S23: -0.0558 REMARK 3 S31: 0.7419 S32: 0.0837 S33: -0.0012 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 439 THROUGH 449 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.3755 -28.5750 15.7404 REMARK 3 T TENSOR REMARK 3 T11: 0.5413 T22: 0.5974 REMARK 3 T33: 0.3919 T12: 0.1811 REMARK 3 T13: -0.1442 T23: -0.1234 REMARK 3 L TENSOR REMARK 3 L11: 1.0915 L22: 2.5600 REMARK 3 L33: 0.5963 L12: 0.0705 REMARK 3 L13: -0.2530 L23: -0.7228 REMARK 3 S TENSOR REMARK 3 S11: 0.1782 S12: -0.7252 S13: -0.0594 REMARK 3 S21: 0.6347 S22: 0.3817 S23: 0.1424 REMARK 3 S31: -0.2524 S32: -0.1798 S33: 0.0476 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 450 THROUGH 459 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.6245 -21.6137 7.7993 REMARK 3 T TENSOR REMARK 3 T11: 0.5704 T22: 0.2537 REMARK 3 T33: 0.3276 T12: 0.2060 REMARK 3 T13: 0.0358 T23: 0.0206 REMARK 3 L TENSOR REMARK 3 L11: 0.7209 L22: 0.9926 REMARK 3 L33: 6.4413 L12: 0.5980 REMARK 3 L13: 1.8290 L23: 0.5836 REMARK 3 S TENSOR REMARK 3 S11: -0.2403 S12: -0.4893 S13: 0.2674 REMARK 3 S21: 0.7969 S22: 0.1848 S23: 0.6775 REMARK 3 S31: -0.2703 S32: -0.8989 S33: -0.0061 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 460 THROUGH 470 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.2164 -38.5850 8.3142 REMARK 3 T TENSOR REMARK 3 T11: 0.5113 T22: 0.4207 REMARK 3 T33: 0.4169 T12: 0.1775 REMARK 3 T13: 0.0605 T23: 0.0379 REMARK 3 L TENSOR REMARK 3 L11: 0.7868 L22: 0.9503 REMARK 3 L33: 0.4659 L12: 0.7575 REMARK 3 L13: 0.3388 L23: 0.0583 REMARK 3 S TENSOR REMARK 3 S11: 0.2321 S12: 0.1248 S13: -0.2136 REMARK 3 S21: -0.1391 S22: -0.0638 S23: -0.8258 REMARK 3 S31: 0.5871 S32: -0.2312 S33: 0.0173 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 471 THROUGH 475 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.1947 -42.7582 1.7980 REMARK 3 T TENSOR REMARK 3 T11: 0.6480 T22: 0.5046 REMARK 3 T33: 0.7674 T12: 0.0849 REMARK 3 T13: -0.1194 T23: -0.1674 REMARK 3 L TENSOR REMARK 3 L11: 3.9438 L22: 3.1994 REMARK 3 L33: 3.3726 L12: -3.3075 REMARK 3 L13: 1.9483 L23: -0.6219 REMARK 3 S TENSOR REMARK 3 S11: -0.6105 S12: -0.7145 S13: -0.4070 REMARK 3 S21: 0.1859 S22: -0.0566 S23: 2.5106 REMARK 3 S31: 0.7760 S32: -1.5422 S33: 0.0975 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 335 THROUGH 346 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.3284 -41.3465 22.4144 REMARK 3 T TENSOR REMARK 3 T11: 0.6710 T22: 0.4299 REMARK 3 T33: 0.5010 T12: 0.0964 REMARK 3 T13: -0.0175 T23: -0.0407 REMARK 3 L TENSOR REMARK 3 L11: 0.0152 L22: 0.6958 REMARK 3 L33: 0.6846 L12: 0.0751 REMARK 3 L13: -0.0987 L23: -0.6171 REMARK 3 S TENSOR REMARK 3 S11: -0.1564 S12: 0.3336 S13: -0.3575 REMARK 3 S21: -0.1607 S22: 0.1040 S23: -0.0441 REMARK 3 S31: 0.9482 S32: 0.8678 S33: -0.0006 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 335 THROUGH 343 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.0364 -16.3009 7.0245 REMARK 3 T TENSOR REMARK 3 T11: 0.7450 T22: 0.4870 REMARK 3 T33: 0.6215 T12: 0.0944 REMARK 3 T13: -0.1311 T23: -0.0593 REMARK 3 L TENSOR REMARK 3 L11: 1.2703 L22: 0.6851 REMARK 3 L33: 6.2394 L12: -0.4322 REMARK 3 L13: 1.2691 L23: 0.8269 REMARK 3 S TENSOR REMARK 3 S11: -0.5677 S12: -0.3444 S13: 0.9147 REMARK 3 S21: -0.2778 S22: 0.0873 S23: -0.9629 REMARK 3 S31: -2.5002 S32: 1.3718 S33: 0.0334 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7SN6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-OCT-21. REMARK 100 THE DEPOSITION ID IS D_1000259085. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUN-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS NOVEMBER 3, 2014 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.8 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21337 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 37.970 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.03800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.49900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4FXW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CITRATE TRIBASIC REMARK 280 DIHYDRATE PH 5.6, 15% V/V 2-PROPANOL, 20% PEG 4000, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 38.08150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.57800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 38.08150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.57800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 370 REMARK 465 PRO A 371 REMARK 465 GLY B 370 REMARK 465 LYS C 333 REMARK 465 ARG C 334 REMARK 465 GLY C 347 REMARK 465 GLY C 348 REMARK 465 SER C 349 REMARK 465 THR C 350 REMARK 465 PRO C 351 REMARK 465 LYS D 333 REMARK 465 ARG D 334 REMARK 465 SER D 344 REMARK 465 GLN D 345 REMARK 465 MET D 346 REMARK 465 GLY D 347 REMARK 465 GLY D 348 REMARK 465 SER D 349 REMARK 465 THR D 350 REMARK 465 PRO D 351 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 393 CG CD OE1 OE2 REMARK 470 GLU A 396 CG CD OE1 OE2 REMARK 470 GLU A 400 CD OE1 OE2 REMARK 470 ARG A 403 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 422 CG OD1 OD2 REMARK 470 VAL A 424 CG1 CG2 REMARK 470 ASP A 465 CG OD1 OD2 REMARK 470 ASP A 467 CG OD1 OD2 REMARK 470 GLU B 393 CD OE1 OE2 REMARK 470 GLU B 396 CG CD OE1 OE2 REMARK 470 GLU B 400 CG CD OE1 OE2 REMARK 470 ASP B 404 CG OD1 OD2 REMARK 470 LYS B 413 CG CD CE NZ REMARK 470 GLN B 443 CG CD OE1 NE2 REMARK 470 GLN B 447 CG CD OE1 NE2 REMARK 470 ARG B 472 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 335 CE NZ REMARK 470 GLU C 340 CG CD OE1 OE2 REMARK 470 LYS D 335 CG CD CE NZ REMARK 470 GLU D 340 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PRO A 466 H HIS A 470 1.52 REMARK 500 HZ3 LYS A 453 O HOH A 501 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE B 474 -156.47 -119.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE B 474 TRP B 475 -102.34 REMARK 500 REMARK 500 REMARK: NULL DBREF 7SN6 A 375 475 UNP P26368 U2AF2_HUMAN 375 475 DBREF 7SN6 B 375 475 UNP P26368 U2AF2_HUMAN 375 475 DBREF 7SN6 C 333 351 UNP O75533 SF3B1_HUMAN 333 351 DBREF 7SN6 D 333 351 UNP O75533 SF3B1_HUMAN 333 351 SEQADV 7SN6 GLY A 370 UNP P26368 EXPRESSION TAG SEQADV 7SN6 PRO A 371 UNP P26368 EXPRESSION TAG SEQADV 7SN6 LEU A 372 UNP P26368 EXPRESSION TAG SEQADV 7SN6 GLY A 373 UNP P26368 EXPRESSION TAG SEQADV 7SN6 SER A 374 UNP P26368 EXPRESSION TAG SEQADV 7SN6 GLY B 370 UNP P26368 EXPRESSION TAG SEQADV 7SN6 PRO B 371 UNP P26368 EXPRESSION TAG SEQADV 7SN6 LEU B 372 UNP P26368 EXPRESSION TAG SEQADV 7SN6 GLY B 373 UNP P26368 EXPRESSION TAG SEQADV 7SN6 SER B 374 UNP P26368 EXPRESSION TAG SEQRES 1 A 106 GLY PRO LEU GLY SER THR GLU VAL LEU CYS LEU MET ASN SEQRES 2 A 106 MET VAL LEU PRO GLU GLU LEU LEU ASP ASP GLU GLU TYR SEQRES 3 A 106 GLU GLU ILE VAL GLU ASP VAL ARG ASP GLU CYS SER LYS SEQRES 4 A 106 TYR GLY LEU VAL LYS SER ILE GLU ILE PRO ARG PRO VAL SEQRES 5 A 106 ASP GLY VAL GLU VAL PRO GLY CYS GLY LYS ILE PHE VAL SEQRES 6 A 106 GLU PHE THR SER VAL PHE ASP CYS GLN LYS ALA MET GLN SEQRES 7 A 106 GLY LEU THR GLY ARG LYS PHE ALA ASN ARG VAL VAL VAL SEQRES 8 A 106 THR LYS TYR CYS ASP PRO ASP SER TYR HIS ARG ARG ASP SEQRES 9 A 106 PHE TRP SEQRES 1 B 106 GLY PRO LEU GLY SER THR GLU VAL LEU CYS LEU MET ASN SEQRES 2 B 106 MET VAL LEU PRO GLU GLU LEU LEU ASP ASP GLU GLU TYR SEQRES 3 B 106 GLU GLU ILE VAL GLU ASP VAL ARG ASP GLU CYS SER LYS SEQRES 4 B 106 TYR GLY LEU VAL LYS SER ILE GLU ILE PRO ARG PRO VAL SEQRES 5 B 106 ASP GLY VAL GLU VAL PRO GLY CYS GLY LYS ILE PHE VAL SEQRES 6 B 106 GLU PHE THR SER VAL PHE ASP CYS GLN LYS ALA MET GLN SEQRES 7 B 106 GLY LEU THR GLY ARG LYS PHE ALA ASN ARG VAL VAL VAL SEQRES 8 B 106 THR LYS TYR CYS ASP PRO ASP SER TYR HIS ARG ARG ASP SEQRES 9 B 106 PHE TRP SEQRES 1 C 19 LYS ARG LYS SER ARG TRP ASP GLU THR PRO ALA SER GLN SEQRES 2 C 19 MET GLY GLY SER THR PRO SEQRES 1 D 19 LYS ARG LYS SER ARG TRP ASP GLU THR PRO ALA SER GLN SEQRES 2 D 19 MET GLY GLY SER THR PRO HET IPA B 501 12 HETNAM IPA ISOPROPYL ALCOHOL HETSYN IPA 2-PROPANOL FORMUL 5 IPA C3 H8 O FORMUL 6 HOH *71(H2 O) HELIX 1 AA1 LEU A 385 LEU A 390 5 6 HELIX 2 AA2 ASP A 391 SER A 407 1 17 HELIX 3 AA3 SER A 438 THR A 450 1 13 HELIX 4 AA4 ASP A 465 ARG A 472 1 8 HELIX 5 AA5 LEU B 385 LEU B 390 1 6 HELIX 6 AA6 ASP B 391 SER B 407 1 17 HELIX 7 AA7 SER B 438 THR B 450 1 13 HELIX 8 AA8 ASP B 465 ARG B 471 1 7 HELIX 9 AA9 PRO C 342 MET C 346 5 5 SHEET 1 AA1 4 VAL A 412 GLU A 416 0 SHEET 2 AA1 4 ILE A 432 PHE A 436 -1 O PHE A 433 N GLU A 416 SHEET 3 AA1 4 VAL A 377 MET A 381 -1 N LEU A 380 O ILE A 432 SHEET 4 AA1 4 VAL A 460 CYS A 464 -1 O VAL A 460 N MET A 381 SHEET 1 AA2 2 LYS A 453 PHE A 454 0 SHEET 2 AA2 2 ARG A 457 VAL A 458 -1 O ARG A 457 N PHE A 454 SHEET 1 AA3 4 VAL B 412 GLU B 416 0 SHEET 2 AA3 4 ILE B 432 PHE B 436 -1 O GLU B 435 N LYS B 413 SHEET 3 AA3 4 VAL B 377 MET B 381 -1 N LEU B 380 O ILE B 432 SHEET 4 AA3 4 VAL B 460 TYR B 463 -1 O VAL B 460 N MET B 381 SHEET 1 AA4 2 LYS B 453 PHE B 454 0 SHEET 2 AA4 2 ARG B 457 VAL B 458 -1 O ARG B 457 N PHE B 454 CISPEP 1 GLY A 373 SER A 374 0 0.21 CRYST1 76.163 63.156 49.387 90.00 94.37 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013130 0.000000 0.001004 0.00000 SCALE2 0.000000 0.015834 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020307 0.00000