data_7SPP # _entry.id 7SPP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7SPP pdb_00007spp 10.2210/pdb7spp/pdb WWPDB D_1000258423 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7SPP _pdbx_database_status.recvd_initial_deposition_date 2021-11-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Shi, K.' 1 0000-0003-4175-3714 'Aihara, H.' 2 0000-0001-7508-6230 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 12 _citation.language ? _citation.page_first 7325 _citation.page_last 7325 _citation.title 'Mechanisms of SARS-CoV-2 neutralization by shark variable new antigen receptors elucidated through X-ray crystallography.' _citation.year 2021 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-021-27611-y _citation.pdbx_database_id_PubMed 34916516 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ubah, O.C.' 1 0000-0001-9011-8405 primary 'Lake, E.W.' 2 ? primary 'Gunaratne, G.S.' 3 ? primary 'Gallant, J.P.' 4 ? primary 'Fernie, M.' 5 ? primary 'Robertson, A.J.' 6 ? primary 'Marchant, J.S.' 7 0000-0001-6592-0877 primary 'Bold, T.D.' 8 ? primary 'Langlois, R.A.' 9 ? primary 'Matchett, W.E.' 10 0000-0001-7515-2226 primary 'Thiede, J.M.' 11 0000-0002-6603-281X primary 'Shi, K.' 12 ? primary 'Yin, L.' 13 ? primary 'Moeller, N.H.' 14 ? primary 'Banerjee, S.' 15 ? primary 'Ferguson, L.' 16 ? primary 'Kovaleva, M.' 17 ? primary 'Porter, A.J.' 18 ? primary 'Aihara, H.' 19 0000-0001-7508-6230 primary 'LeBeau, A.M.' 20 0000-0003-3802-7789 primary 'Barelle, C.J.' 21 0000-0003-1872-3373 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7SPP _cell.details ? _cell.formula_units_Z ? _cell.length_a 61.448 _cell.length_a_esd ? _cell.length_b 74.229 _cell.length_b_esd ? _cell.length_c 75.456 _cell.length_c_esd ? _cell.volume 344171.687 _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7SPP _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab (y,z,x)' _symmetry.space_group_name_H-M 'P 21 2 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Spike protein S1' 25520.680 1 ? ? ? ? 2 polymer man 'VNAR 2C02' 13017.506 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 4 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 6 water nat water 18.015 128 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYAD SFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGST PCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKHHHHHHHH ; ;RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYAD SFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGST PCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKHHHHHHHH ; A ? 2 'polypeptide(L)' no no ;MASVNQTPRTATKETGESLTINCVVTGASCSWSRTYWYRKNPGSSNQERISISGRYVESVNKGAKSFSLRIKDLTVADSA TYYCKALINTGKDCTMNFHYDGAGTVLTVNQHHHHHH ; ;MASVNQTPRTATKETGESLTINCVVTGASCSWSRTYWYRKNPGSSNQERISISGRYVESVNKGAKSFSLRIKDLTVADSA TYYCKALINTGKDCTMNFHYDGAGTVLTVNQHHHHHH ; C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 VAL n 1 3 GLN n 1 4 PRO n 1 5 THR n 1 6 GLU n 1 7 SER n 1 8 ILE n 1 9 VAL n 1 10 ARG n 1 11 PHE n 1 12 PRO n 1 13 ASN n 1 14 ILE n 1 15 THR n 1 16 ASN n 1 17 LEU n 1 18 CYS n 1 19 PRO n 1 20 PHE n 1 21 GLY n 1 22 GLU n 1 23 VAL n 1 24 PHE n 1 25 ASN n 1 26 ALA n 1 27 THR n 1 28 ARG n 1 29 PHE n 1 30 ALA n 1 31 SER n 1 32 VAL n 1 33 TYR n 1 34 ALA n 1 35 TRP n 1 36 ASN n 1 37 ARG n 1 38 LYS n 1 39 ARG n 1 40 ILE n 1 41 SER n 1 42 ASN n 1 43 CYS n 1 44 VAL n 1 45 ALA n 1 46 ASP n 1 47 TYR n 1 48 SER n 1 49 VAL n 1 50 LEU n 1 51 TYR n 1 52 ASN n 1 53 SER n 1 54 ALA n 1 55 SER n 1 56 PHE n 1 57 SER n 1 58 THR n 1 59 PHE n 1 60 LYS n 1 61 CYS n 1 62 TYR n 1 63 GLY n 1 64 VAL n 1 65 SER n 1 66 PRO n 1 67 THR n 1 68 LYS n 1 69 LEU n 1 70 ASN n 1 71 ASP n 1 72 LEU n 1 73 CYS n 1 74 PHE n 1 75 THR n 1 76 ASN n 1 77 VAL n 1 78 TYR n 1 79 ALA n 1 80 ASP n 1 81 SER n 1 82 PHE n 1 83 VAL n 1 84 ILE n 1 85 ARG n 1 86 GLY n 1 87 ASP n 1 88 GLU n 1 89 VAL n 1 90 ARG n 1 91 GLN n 1 92 ILE n 1 93 ALA n 1 94 PRO n 1 95 GLY n 1 96 GLN n 1 97 THR n 1 98 GLY n 1 99 LYS n 1 100 ILE n 1 101 ALA n 1 102 ASP n 1 103 TYR n 1 104 ASN n 1 105 TYR n 1 106 LYS n 1 107 LEU n 1 108 PRO n 1 109 ASP n 1 110 ASP n 1 111 PHE n 1 112 THR n 1 113 GLY n 1 114 CYS n 1 115 VAL n 1 116 ILE n 1 117 ALA n 1 118 TRP n 1 119 ASN n 1 120 SER n 1 121 ASN n 1 122 ASN n 1 123 LEU n 1 124 ASP n 1 125 SER n 1 126 LYS n 1 127 VAL n 1 128 GLY n 1 129 GLY n 1 130 ASN n 1 131 TYR n 1 132 ASN n 1 133 TYR n 1 134 LEU n 1 135 TYR n 1 136 ARG n 1 137 LEU n 1 138 PHE n 1 139 ARG n 1 140 LYS n 1 141 SER n 1 142 ASN n 1 143 LEU n 1 144 LYS n 1 145 PRO n 1 146 PHE n 1 147 GLU n 1 148 ARG n 1 149 ASP n 1 150 ILE n 1 151 SER n 1 152 THR n 1 153 GLU n 1 154 ILE n 1 155 TYR n 1 156 GLN n 1 157 ALA n 1 158 GLY n 1 159 SER n 1 160 THR n 1 161 PRO n 1 162 CYS n 1 163 ASN n 1 164 GLY n 1 165 VAL n 1 166 GLU n 1 167 GLY n 1 168 PHE n 1 169 ASN n 1 170 CYS n 1 171 TYR n 1 172 PHE n 1 173 PRO n 1 174 LEU n 1 175 GLN n 1 176 SER n 1 177 TYR n 1 178 GLY n 1 179 PHE n 1 180 GLN n 1 181 PRO n 1 182 THR n 1 183 ASN n 1 184 GLY n 1 185 VAL n 1 186 GLY n 1 187 TYR n 1 188 GLN n 1 189 PRO n 1 190 TYR n 1 191 ARG n 1 192 VAL n 1 193 VAL n 1 194 VAL n 1 195 LEU n 1 196 SER n 1 197 PHE n 1 198 GLU n 1 199 LEU n 1 200 LEU n 1 201 HIS n 1 202 ALA n 1 203 PRO n 1 204 ALA n 1 205 THR n 1 206 VAL n 1 207 CYS n 1 208 GLY n 1 209 PRO n 1 210 LYS n 1 211 LYS n 1 212 SER n 1 213 THR n 1 214 ASN n 1 215 LEU n 1 216 VAL n 1 217 LYS n 1 218 HIS n 1 219 HIS n 1 220 HIS n 1 221 HIS n 1 222 HIS n 1 223 HIS n 1 224 HIS n 1 225 HIS n 2 1 MET n 2 2 ALA n 2 3 SER n 2 4 VAL n 2 5 ASN n 2 6 GLN n 2 7 THR n 2 8 PRO n 2 9 ARG n 2 10 THR n 2 11 ALA n 2 12 THR n 2 13 LYS n 2 14 GLU n 2 15 THR n 2 16 GLY n 2 17 GLU n 2 18 SER n 2 19 LEU n 2 20 THR n 2 21 ILE n 2 22 ASN n 2 23 CYS n 2 24 VAL n 2 25 VAL n 2 26 THR n 2 27 GLY n 2 28 ALA n 2 29 SER n 2 30 CYS n 2 31 SER n 2 32 TRP n 2 33 SER n 2 34 ARG n 2 35 THR n 2 36 TYR n 2 37 TRP n 2 38 TYR n 2 39 ARG n 2 40 LYS n 2 41 ASN n 2 42 PRO n 2 43 GLY n 2 44 SER n 2 45 SER n 2 46 ASN n 2 47 GLN n 2 48 GLU n 2 49 ARG n 2 50 ILE n 2 51 SER n 2 52 ILE n 2 53 SER n 2 54 GLY n 2 55 ARG n 2 56 TYR n 2 57 VAL n 2 58 GLU n 2 59 SER n 2 60 VAL n 2 61 ASN n 2 62 LYS n 2 63 GLY n 2 64 ALA n 2 65 LYS n 2 66 SER n 2 67 PHE n 2 68 SER n 2 69 LEU n 2 70 ARG n 2 71 ILE n 2 72 LYS n 2 73 ASP n 2 74 LEU n 2 75 THR n 2 76 VAL n 2 77 ALA n 2 78 ASP n 2 79 SER n 2 80 ALA n 2 81 THR n 2 82 TYR n 2 83 TYR n 2 84 CYS n 2 85 LYS n 2 86 ALA n 2 87 LEU n 2 88 ILE n 2 89 ASN n 2 90 THR n 2 91 GLY n 2 92 LYS n 2 93 ASP n 2 94 CYS n 2 95 THR n 2 96 MET n 2 97 ASN n 2 98 PHE n 2 99 HIS n 2 100 TYR n 2 101 ASP n 2 102 GLY n 2 103 ALA n 2 104 GLY n 2 105 THR n 2 106 VAL n 2 107 LEU n 2 108 THR n 2 109 VAL n 2 110 ASN n 2 111 GLN n 2 112 HIS n 2 113 HIS n 2 114 HIS n 2 115 HIS n 2 116 HIS n 2 117 HIS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 225 '2019-nCoV, SARS-CoV-2, COVID-19 virus' ? 'S, 2' ? ? ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? 'fall armyworm' 'Spodoptera frugiperda' 7108 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 117 llama ? ? ? ? ? ? ? ? 'Squalus acanthias' 7797 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SPIKE_SARS2 P0DTC2 ? 1 ;RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYAD SFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGST PCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVK ; 319 2 PDB 7SPP 7SPP ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7SPP A 1 ? 217 ? P0DTC2 319 ? 535 ? 319 535 2 2 7SPP C 1 ? 117 ? 7SPP 19 ? 135 ? 19 135 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7SPP HIS A 218 ? UNP P0DTC2 ? ? 'expression tag' 536 1 1 7SPP HIS A 219 ? UNP P0DTC2 ? ? 'expression tag' 537 2 1 7SPP HIS A 220 ? UNP P0DTC2 ? ? 'expression tag' 538 3 1 7SPP HIS A 221 ? UNP P0DTC2 ? ? 'expression tag' 539 4 1 7SPP HIS A 222 ? UNP P0DTC2 ? ? 'expression tag' 540 5 1 7SPP HIS A 223 ? UNP P0DTC2 ? ? 'expression tag' 541 6 1 7SPP HIS A 224 ? UNP P0DTC2 ? ? 'expression tag' 542 7 1 7SPP HIS A 225 ? UNP P0DTC2 ? ? 'expression tag' 543 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7SPP _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.23 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 44.91 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M sodium sulfate and 20 % (w/v) PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-07-17 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 41.53 _reflns.entry_id 7SPP _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.96 _reflns.d_resolution_low 47.33 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 24971 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.0 _reflns.pdbx_Rmerge_I_obs 0.056 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.4 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.065 _reflns.pdbx_Rpim_I_all 0.041 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.960 _reflns_shell.d_res_low 2.01 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1764 _reflns_shell.percent_possible_all 98.900 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.278 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 4 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.832 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 56.94 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7SPP _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.96 _refine.ls_d_res_low 47.33 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 24921 _refine.ls_number_reflns_R_free 1263 _refine.ls_number_reflns_R_work 23658 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.94 _refine.ls_percent_reflns_R_free 5.07 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1899 _refine.ls_R_factor_R_free 0.2243 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1880 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6YM0,4HGK _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 28.5378 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2663 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.96 _refine_hist.d_res_low 47.33 _refine_hist.number_atoms_solvent 129 _refine_hist.number_atoms_total 2542 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2390 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0113 ? 2517 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.0298 ? 3423 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0597 ? 369 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0103 ? 448 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 12.3294 ? 906 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.96 2.04 . . 124 2619 98.32 . . . 0.3856 . 0.3689 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.04 2.13 . . 129 2580 98.05 . . . 0.3434 . 0.2871 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.13 2.24 . . 154 2573 97.71 . . . 0.2601 . 0.2393 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.24 2.38 . . 134 2618 98.92 . . . 0.2662 . 0.2218 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.38 2.57 . . 125 2667 99.15 . . . 0.3180 . 0.2304 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.57 2.83 . . 138 2636 99.04 . . . 0.2657 . 0.2157 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.83 3.24 . . 168 2605 97.54 . . . 0.2636 . 0.2006 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.24 4.08 . . 152 2659 98.32 . . . 0.2091 . 0.1682 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.08 47.33 . . 139 2701 94.73 . . . 0.1596 . 0.1495 . . . . . . . . . . . # _struct.entry_id 7SPP _struct.title 'Crystal structure of the SARS-CoV-2 receptor binding domain in complex with VNAR 2C02' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7SPP _struct_keywords.text 'RBD, VIRAL PROTEIN, VNAR, VIRAL PROTEIN-IMMUNE SYSTEM complex' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 3 ? F N N 5 ? G N N 6 ? H N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 19 ? ASN A 25 ? PRO A 337 ASN A 343 1 ? 7 HELX_P HELX_P2 AA2 SER A 31 ? TRP A 35 ? SER A 349 TRP A 353 5 ? 5 HELX_P HELX_P3 AA3 TYR A 47 ? ASN A 52 ? TYR A 365 ASN A 370 1 ? 6 HELX_P HELX_P4 AA4 SER A 65 ? ASP A 71 ? SER A 383 ASP A 389 5 ? 7 HELX_P HELX_P5 AA5 ASP A 87 ? ILE A 92 ? ASP A 405 ILE A 410 5 ? 6 HELX_P HELX_P6 AA6 GLY A 98 ? ASN A 104 ? GLY A 416 ASN A 422 1 ? 7 HELX_P HELX_P7 AA7 SER A 120 ? SER A 125 ? SER A 438 SER A 443 1 ? 6 HELX_P HELX_P8 AA8 GLY A 184 ? TYR A 187 ? GLY A 502 TYR A 505 5 ? 4 HELX_P HELX_P9 AA9 LYS B 62 ? ALA B 64 ? LYS C 80 ALA C 82 5 ? 3 HELX_P HELX_P10 AB1 THR B 75 ? SER B 79 ? THR C 93 SER C 97 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 18 SG ? ? ? 1_555 A CYS 43 SG ? ? A CYS 336 A CYS 361 1_555 ? ? ? ? ? ? ? 2.075 ? ? disulf2 disulf ? ? A CYS 61 SG ? ? ? 1_555 A CYS 114 SG ? ? A CYS 379 A CYS 432 1_555 ? ? ? ? ? ? ? 2.098 ? ? disulf3 disulf ? ? A CYS 73 SG ? ? ? 1_555 A CYS 207 SG ? ? A CYS 391 A CYS 525 1_555 ? ? ? ? ? ? ? 2.046 ? ? disulf4 disulf ? ? A CYS 162 SG ? ? ? 1_555 A CYS 170 SG ? ? A CYS 480 A CYS 488 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf5 disulf ? ? B CYS 23 SG ? ? ? 1_555 B CYS 84 SG ? ? C CYS 41 C CYS 102 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf6 disulf ? ? B CYS 30 SG ? ? ? 1_555 B CYS 94 SG ? ? C CYS 48 C CYS 112 1_555 ? ? ? ? ? ? ? 2.038 ? ? covale1 covale one ? A ASN 25 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 343 A NAG 602 1_555 ? ? ? ? ? ? ? 1.468 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id THR _struct_mon_prot_cis.label_seq_id 7 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id THR _struct_mon_prot_cis.auth_seq_id 25 _struct_mon_prot_cis.auth_asym_id C _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 8 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 26 _struct_mon_prot_cis.pdbx_auth_asym_id_2 C _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.92 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 3 ? AA3 ? 2 ? AA4 ? 2 ? AA5 ? 4 ? AA6 ? 5 ? AA7 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel AA7 1 2 ? parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ASN A 36 ? ILE A 40 ? ASN A 354 ILE A 358 AA1 2 ASN A 76 ? ARG A 85 ? ASN A 394 ARG A 403 AA1 3 PRO A 189 ? GLU A 198 ? PRO A 507 GLU A 516 AA1 4 GLY A 113 ? ASN A 119 ? GLY A 431 ASN A 437 AA1 5 THR A 58 ? TYR A 62 ? THR A 376 TYR A 380 AA2 1 CYS A 43 ? VAL A 44 ? CYS A 361 VAL A 362 AA2 2 VAL A 206 ? CYS A 207 ? VAL A 524 CYS A 525 AA2 3 CYS A 73 ? PHE A 74 ? CYS A 391 PHE A 392 AA3 1 LEU A 134 ? ARG A 136 ? LEU A 452 ARG A 454 AA3 2 LEU A 174 ? SER A 176 ? LEU A 492 SER A 494 AA4 1 TYR A 155 ? GLN A 156 ? TYR A 473 GLN A 474 AA4 2 CYS A 170 ? TYR A 171 ? CYS A 488 TYR A 489 AA5 1 SER B 3 ? THR B 7 ? SER C 21 THR C 25 AA5 2 LEU B 19 ? THR B 26 ? LEU C 37 THR C 44 AA5 3 SER B 66 ? ILE B 71 ? SER C 84 ILE C 89 AA5 4 TYR B 56 ? ASN B 61 ? TYR C 74 ASN C 79 AA6 1 THR B 10 ? GLU B 14 ? THR C 28 GLU C 32 AA6 2 THR B 105 ? ASN B 110 ? THR C 123 ASN C 128 AA6 3 ALA B 80 ? THR B 90 ? ALA C 98 THR C 108 AA6 4 TRP B 32 ? LYS B 40 ? TRP C 50 LYS C 58 AA6 5 GLU B 48 ? ARG B 49 ? GLU C 66 ARG C 67 AA7 1 THR B 10 ? GLU B 14 ? THR C 28 GLU C 32 AA7 2 THR B 105 ? ASN B 110 ? THR C 123 ASN C 128 AA7 3 ALA B 80 ? THR B 90 ? ALA C 98 THR C 108 AA7 4 MET B 96 ? ASP B 101 ? MET C 114 ASP C 119 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 40 ? N ILE A 358 O VAL A 77 ? O VAL A 395 AA1 2 3 N TYR A 78 ? N TYR A 396 O SER A 196 ? O SER A 514 AA1 3 4 O VAL A 193 ? O VAL A 511 N ILE A 116 ? N ILE A 434 AA1 4 5 O VAL A 115 ? O VAL A 433 N LYS A 60 ? N LYS A 378 AA2 1 2 N CYS A 43 ? N CYS A 361 O CYS A 207 ? O CYS A 525 AA2 2 3 O VAL A 206 ? O VAL A 524 N PHE A 74 ? N PHE A 392 AA3 1 2 N TYR A 135 ? N TYR A 453 O GLN A 175 ? O GLN A 493 AA4 1 2 N TYR A 155 ? N TYR A 473 O TYR A 171 ? O TYR A 489 AA5 1 2 N ASN B 5 ? N ASN C 23 O VAL B 24 ? O VAL C 42 AA5 2 3 N LEU B 19 ? N LEU C 37 O ILE B 71 ? O ILE C 89 AA5 3 4 O ARG B 70 ? O ARG C 88 N VAL B 57 ? N VAL C 75 AA6 1 2 N ALA B 11 ? N ALA C 29 O THR B 108 ? O THR C 126 AA6 2 3 O LEU B 107 ? O LEU C 125 N ALA B 80 ? N ALA C 98 AA6 3 4 O TYR B 83 ? O TYR C 101 N TYR B 38 ? N TYR C 56 AA6 4 5 N ARG B 39 ? N ARG C 57 O GLU B 48 ? O GLU C 66 AA7 1 2 N ALA B 11 ? N ALA C 29 O THR B 108 ? O THR C 126 AA7 2 3 O LEU B 107 ? O LEU C 125 N ALA B 80 ? N ALA C 98 AA7 3 4 N ILE B 88 ? N ILE C 106 O PHE B 98 ? O PHE C 116 # _atom_sites.entry_id 7SPP _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.016274 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013472 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013253 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? CL ? ? 9.50761 7.44341 ? ? 1.04373 23.83732 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? ? ? ? ? ? ? ? ? ? ? ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 319 ? ? ? A . n A 1 2 VAL 2 320 ? ? ? A . n A 1 3 GLN 3 321 ? ? ? A . n A 1 4 PRO 4 322 ? ? ? A . n A 1 5 THR 5 323 ? ? ? A . n A 1 6 GLU 6 324 ? ? ? A . n A 1 7 SER 7 325 ? ? ? A . n A 1 8 ILE 8 326 ? ? ? A . n A 1 9 VAL 9 327 ? ? ? A . n A 1 10 ARG 10 328 ? ? ? A . n A 1 11 PHE 11 329 ? ? ? A . n A 1 12 PRO 12 330 ? ? ? A . n A 1 13 ASN 13 331 ? ? ? A . n A 1 14 ILE 14 332 ? ? ? A . n A 1 15 THR 15 333 ? ? ? A . n A 1 16 ASN 16 334 334 ASN ASN A . n A 1 17 LEU 17 335 335 LEU LEU A . n A 1 18 CYS 18 336 336 CYS CYS A . n A 1 19 PRO 19 337 337 PRO PRO A . n A 1 20 PHE 20 338 338 PHE PHE A . n A 1 21 GLY 21 339 339 GLY GLY A . n A 1 22 GLU 22 340 340 GLU GLU A . n A 1 23 VAL 23 341 341 VAL VAL A . n A 1 24 PHE 24 342 342 PHE PHE A . n A 1 25 ASN 25 343 343 ASN ASN A . n A 1 26 ALA 26 344 344 ALA ALA A . n A 1 27 THR 27 345 345 THR THR A . n A 1 28 ARG 28 346 346 ARG ARG A . n A 1 29 PHE 29 347 347 PHE PHE A . n A 1 30 ALA 30 348 348 ALA ALA A . n A 1 31 SER 31 349 349 SER SER A . n A 1 32 VAL 32 350 350 VAL VAL A . n A 1 33 TYR 33 351 351 TYR TYR A . n A 1 34 ALA 34 352 352 ALA ALA A . n A 1 35 TRP 35 353 353 TRP TRP A . n A 1 36 ASN 36 354 354 ASN ASN A . n A 1 37 ARG 37 355 355 ARG ARG A . n A 1 38 LYS 38 356 356 LYS LYS A . n A 1 39 ARG 39 357 357 ARG ARG A . n A 1 40 ILE 40 358 358 ILE ILE A . n A 1 41 SER 41 359 359 SER SER A . n A 1 42 ASN 42 360 360 ASN ASN A . n A 1 43 CYS 43 361 361 CYS CYS A . n A 1 44 VAL 44 362 362 VAL VAL A . n A 1 45 ALA 45 363 363 ALA ALA A . n A 1 46 ASP 46 364 364 ASP ASP A . n A 1 47 TYR 47 365 365 TYR TYR A . n A 1 48 SER 48 366 366 SER SER A . n A 1 49 VAL 49 367 367 VAL VAL A . n A 1 50 LEU 50 368 368 LEU LEU A . n A 1 51 TYR 51 369 369 TYR TYR A . n A 1 52 ASN 52 370 370 ASN ASN A . n A 1 53 SER 53 371 371 SER SER A . n A 1 54 ALA 54 372 372 ALA ALA A . n A 1 55 SER 55 373 373 SER SER A . n A 1 56 PHE 56 374 374 PHE PHE A . n A 1 57 SER 57 375 375 SER SER A . n A 1 58 THR 58 376 376 THR THR A . n A 1 59 PHE 59 377 377 PHE PHE A . n A 1 60 LYS 60 378 378 LYS LYS A . n A 1 61 CYS 61 379 379 CYS CYS A . n A 1 62 TYR 62 380 380 TYR TYR A . n A 1 63 GLY 63 381 381 GLY GLY A . n A 1 64 VAL 64 382 382 VAL VAL A . n A 1 65 SER 65 383 383 SER SER A . n A 1 66 PRO 66 384 384 PRO PRO A . n A 1 67 THR 67 385 385 THR THR A . n A 1 68 LYS 68 386 386 LYS LYS A . n A 1 69 LEU 69 387 387 LEU LEU A . n A 1 70 ASN 70 388 388 ASN ASN A . n A 1 71 ASP 71 389 389 ASP ASP A . n A 1 72 LEU 72 390 390 LEU LEU A . n A 1 73 CYS 73 391 391 CYS CYS A . n A 1 74 PHE 74 392 392 PHE PHE A . n A 1 75 THR 75 393 393 THR THR A . n A 1 76 ASN 76 394 394 ASN ASN A . n A 1 77 VAL 77 395 395 VAL VAL A . n A 1 78 TYR 78 396 396 TYR TYR A . n A 1 79 ALA 79 397 397 ALA ALA A . n A 1 80 ASP 80 398 398 ASP ASP A . n A 1 81 SER 81 399 399 SER SER A . n A 1 82 PHE 82 400 400 PHE PHE A . n A 1 83 VAL 83 401 401 VAL VAL A . n A 1 84 ILE 84 402 402 ILE ILE A . n A 1 85 ARG 85 403 403 ARG ARG A . n A 1 86 GLY 86 404 404 GLY GLY A . n A 1 87 ASP 87 405 405 ASP ASP A . n A 1 88 GLU 88 406 406 GLU GLU A . n A 1 89 VAL 89 407 407 VAL VAL A . n A 1 90 ARG 90 408 408 ARG ARG A . n A 1 91 GLN 91 409 409 GLN GLN A . n A 1 92 ILE 92 410 410 ILE ILE A . n A 1 93 ALA 93 411 411 ALA ALA A . n A 1 94 PRO 94 412 412 PRO PRO A . n A 1 95 GLY 95 413 413 GLY GLY A . n A 1 96 GLN 96 414 414 GLN GLN A . n A 1 97 THR 97 415 415 THR THR A . n A 1 98 GLY 98 416 416 GLY GLY A . n A 1 99 LYS 99 417 417 LYS LYS A . n A 1 100 ILE 100 418 418 ILE ILE A . n A 1 101 ALA 101 419 419 ALA ALA A . n A 1 102 ASP 102 420 420 ASP ASP A . n A 1 103 TYR 103 421 421 TYR TYR A . n A 1 104 ASN 104 422 422 ASN ASN A . n A 1 105 TYR 105 423 423 TYR TYR A . n A 1 106 LYS 106 424 424 LYS LYS A . n A 1 107 LEU 107 425 425 LEU LEU A . n A 1 108 PRO 108 426 426 PRO PRO A . n A 1 109 ASP 109 427 427 ASP ASP A . n A 1 110 ASP 110 428 428 ASP ASP A . n A 1 111 PHE 111 429 429 PHE PHE A . n A 1 112 THR 112 430 430 THR THR A . n A 1 113 GLY 113 431 431 GLY GLY A . n A 1 114 CYS 114 432 432 CYS CYS A . n A 1 115 VAL 115 433 433 VAL VAL A . n A 1 116 ILE 116 434 434 ILE ILE A . n A 1 117 ALA 117 435 435 ALA ALA A . n A 1 118 TRP 118 436 436 TRP TRP A . n A 1 119 ASN 119 437 437 ASN ASN A . n A 1 120 SER 120 438 438 SER SER A . n A 1 121 ASN 121 439 439 ASN ASN A . n A 1 122 ASN 122 440 440 ASN ASN A . n A 1 123 LEU 123 441 441 LEU LEU A . n A 1 124 ASP 124 442 442 ASP ASP A . n A 1 125 SER 125 443 443 SER SER A . n A 1 126 LYS 126 444 444 LYS LYS A . n A 1 127 VAL 127 445 445 VAL VAL A . n A 1 128 GLY 128 446 446 GLY GLY A . n A 1 129 GLY 129 447 447 GLY GLY A . n A 1 130 ASN 130 448 448 ASN ASN A . n A 1 131 TYR 131 449 449 TYR TYR A . n A 1 132 ASN 132 450 450 ASN ASN A . n A 1 133 TYR 133 451 451 TYR TYR A . n A 1 134 LEU 134 452 452 LEU LEU A . n A 1 135 TYR 135 453 453 TYR TYR A . n A 1 136 ARG 136 454 454 ARG ARG A . n A 1 137 LEU 137 455 455 LEU LEU A . n A 1 138 PHE 138 456 456 PHE PHE A . n A 1 139 ARG 139 457 457 ARG ARG A . n A 1 140 LYS 140 458 458 LYS LYS A . n A 1 141 SER 141 459 459 SER SER A . n A 1 142 ASN 142 460 460 ASN ASN A . n A 1 143 LEU 143 461 461 LEU LEU A . n A 1 144 LYS 144 462 462 LYS LYS A . n A 1 145 PRO 145 463 463 PRO PRO A . n A 1 146 PHE 146 464 464 PHE PHE A . n A 1 147 GLU 147 465 465 GLU GLU A . n A 1 148 ARG 148 466 466 ARG ARG A . n A 1 149 ASP 149 467 467 ASP ASP A . n A 1 150 ILE 150 468 468 ILE ILE A . n A 1 151 SER 151 469 469 SER SER A . n A 1 152 THR 152 470 470 THR THR A . n A 1 153 GLU 153 471 471 GLU GLU A . n A 1 154 ILE 154 472 472 ILE ILE A . n A 1 155 TYR 155 473 473 TYR TYR A . n A 1 156 GLN 156 474 474 GLN GLN A . n A 1 157 ALA 157 475 475 ALA ALA A . n A 1 158 GLY 158 476 476 GLY GLY A . n A 1 159 SER 159 477 477 SER SER A . n A 1 160 THR 160 478 478 THR THR A . n A 1 161 PRO 161 479 479 PRO PRO A . n A 1 162 CYS 162 480 480 CYS CYS A . n A 1 163 ASN 163 481 481 ASN ASN A . n A 1 164 GLY 164 482 482 GLY GLY A . n A 1 165 VAL 165 483 483 VAL VAL A . n A 1 166 GLU 166 484 484 GLU GLU A . n A 1 167 GLY 167 485 485 GLY GLY A . n A 1 168 PHE 168 486 486 PHE PHE A . n A 1 169 ASN 169 487 487 ASN ASN A . n A 1 170 CYS 170 488 488 CYS CYS A . n A 1 171 TYR 171 489 489 TYR TYR A . n A 1 172 PHE 172 490 490 PHE PHE A . n A 1 173 PRO 173 491 491 PRO PRO A . n A 1 174 LEU 174 492 492 LEU LEU A . n A 1 175 GLN 175 493 493 GLN GLN A . n A 1 176 SER 176 494 494 SER SER A . n A 1 177 TYR 177 495 495 TYR TYR A . n A 1 178 GLY 178 496 496 GLY GLY A . n A 1 179 PHE 179 497 497 PHE PHE A . n A 1 180 GLN 180 498 498 GLN GLN A . n A 1 181 PRO 181 499 499 PRO PRO A . n A 1 182 THR 182 500 500 THR THR A . n A 1 183 ASN 183 501 501 ASN ASN A . n A 1 184 GLY 184 502 502 GLY GLY A . n A 1 185 VAL 185 503 503 VAL VAL A . n A 1 186 GLY 186 504 504 GLY GLY A . n A 1 187 TYR 187 505 505 TYR TYR A . n A 1 188 GLN 188 506 506 GLN GLN A . n A 1 189 PRO 189 507 507 PRO PRO A . n A 1 190 TYR 190 508 508 TYR TYR A . n A 1 191 ARG 191 509 509 ARG ARG A . n A 1 192 VAL 192 510 510 VAL VAL A . n A 1 193 VAL 193 511 511 VAL VAL A . n A 1 194 VAL 194 512 512 VAL VAL A . n A 1 195 LEU 195 513 513 LEU LEU A . n A 1 196 SER 196 514 514 SER SER A . n A 1 197 PHE 197 515 515 PHE PHE A . n A 1 198 GLU 198 516 516 GLU GLU A . n A 1 199 LEU 199 517 517 LEU LEU A . n A 1 200 LEU 200 518 518 LEU LEU A . n A 1 201 HIS 201 519 519 HIS HIS A . n A 1 202 ALA 202 520 520 ALA ALA A . n A 1 203 PRO 203 521 521 PRO PRO A . n A 1 204 ALA 204 522 522 ALA ALA A . n A 1 205 THR 205 523 523 THR THR A . n A 1 206 VAL 206 524 524 VAL VAL A . n A 1 207 CYS 207 525 525 CYS CYS A . n A 1 208 GLY 208 526 526 GLY GLY A . n A 1 209 PRO 209 527 527 PRO PRO A . n A 1 210 LYS 210 528 528 LYS LYS A . n A 1 211 LYS 211 529 ? ? ? A . n A 1 212 SER 212 530 ? ? ? A . n A 1 213 THR 213 531 ? ? ? A . n A 1 214 ASN 214 532 ? ? ? A . n A 1 215 LEU 215 533 ? ? ? A . n A 1 216 VAL 216 534 ? ? ? A . n A 1 217 LYS 217 535 ? ? ? A . n A 1 218 HIS 218 536 ? ? ? A . n A 1 219 HIS 219 537 ? ? ? A . n A 1 220 HIS 220 538 ? ? ? A . n A 1 221 HIS 221 539 ? ? ? A . n A 1 222 HIS 222 540 ? ? ? A . n A 1 223 HIS 223 541 ? ? ? A . n A 1 224 HIS 224 542 ? ? ? A . n A 1 225 HIS 225 543 ? ? ? A . n B 2 1 MET 1 19 ? ? ? C . n B 2 2 ALA 2 20 20 ALA ALA C . n B 2 3 SER 3 21 21 SER SER C . n B 2 4 VAL 4 22 22 VAL VAL C . n B 2 5 ASN 5 23 23 ASN ASN C . n B 2 6 GLN 6 24 24 GLN GLN C . n B 2 7 THR 7 25 25 THR THR C . n B 2 8 PRO 8 26 26 PRO PRO C . n B 2 9 ARG 9 27 27 ARG ARG C . n B 2 10 THR 10 28 28 THR THR C . n B 2 11 ALA 11 29 29 ALA ALA C . n B 2 12 THR 12 30 30 THR THR C . n B 2 13 LYS 13 31 31 LYS LYS C . n B 2 14 GLU 14 32 32 GLU GLU C . n B 2 15 THR 15 33 33 THR THR C . n B 2 16 GLY 16 34 34 GLY GLY C . n B 2 17 GLU 17 35 35 GLU GLU C . n B 2 18 SER 18 36 36 SER SER C . n B 2 19 LEU 19 37 37 LEU LEU C . n B 2 20 THR 20 38 38 THR THR C . n B 2 21 ILE 21 39 39 ILE ILE C . n B 2 22 ASN 22 40 40 ASN ASN C . n B 2 23 CYS 23 41 41 CYS CYS C . n B 2 24 VAL 24 42 42 VAL VAL C . n B 2 25 VAL 25 43 43 VAL VAL C . n B 2 26 THR 26 44 44 THR THR C . n B 2 27 GLY 27 45 45 GLY GLY C . n B 2 28 ALA 28 46 46 ALA ALA C . n B 2 29 SER 29 47 47 SER SER C . n B 2 30 CYS 30 48 48 CYS CYS C . n B 2 31 SER 31 49 49 SER SER C . n B 2 32 TRP 32 50 50 TRP TRP C . n B 2 33 SER 33 51 51 SER SER C . n B 2 34 ARG 34 52 52 ARG ARG C . n B 2 35 THR 35 53 53 THR THR C . n B 2 36 TYR 36 54 54 TYR TYR C . n B 2 37 TRP 37 55 55 TRP TRP C . n B 2 38 TYR 38 56 56 TYR TYR C . n B 2 39 ARG 39 57 57 ARG ARG C . n B 2 40 LYS 40 58 58 LYS LYS C . n B 2 41 ASN 41 59 59 ASN ASN C . n B 2 42 PRO 42 60 60 PRO PRO C . n B 2 43 GLY 43 61 61 GLY GLY C . n B 2 44 SER 44 62 62 SER SER C . n B 2 45 SER 45 63 63 SER SER C . n B 2 46 ASN 46 64 64 ASN ASN C . n B 2 47 GLN 47 65 65 GLN GLN C . n B 2 48 GLU 48 66 66 GLU GLU C . n B 2 49 ARG 49 67 67 ARG ARG C . n B 2 50 ILE 50 68 68 ILE ILE C . n B 2 51 SER 51 69 69 SER SER C . n B 2 52 ILE 52 70 70 ILE ILE C . n B 2 53 SER 53 71 71 SER SER C . n B 2 54 GLY 54 72 72 GLY GLY C . n B 2 55 ARG 55 73 73 ARG ARG C . n B 2 56 TYR 56 74 74 TYR TYR C . n B 2 57 VAL 57 75 75 VAL VAL C . n B 2 58 GLU 58 76 76 GLU GLU C . n B 2 59 SER 59 77 77 SER SER C . n B 2 60 VAL 60 78 78 VAL VAL C . n B 2 61 ASN 61 79 79 ASN ASN C . n B 2 62 LYS 62 80 80 LYS LYS C . n B 2 63 GLY 63 81 81 GLY GLY C . n B 2 64 ALA 64 82 82 ALA ALA C . n B 2 65 LYS 65 83 83 LYS LYS C . n B 2 66 SER 66 84 84 SER SER C . n B 2 67 PHE 67 85 85 PHE PHE C . n B 2 68 SER 68 86 86 SER SER C . n B 2 69 LEU 69 87 87 LEU LEU C . n B 2 70 ARG 70 88 88 ARG ARG C . n B 2 71 ILE 71 89 89 ILE ILE C . n B 2 72 LYS 72 90 90 LYS LYS C . n B 2 73 ASP 73 91 91 ASP ASP C . n B 2 74 LEU 74 92 92 LEU LEU C . n B 2 75 THR 75 93 93 THR THR C . n B 2 76 VAL 76 94 94 VAL VAL C . n B 2 77 ALA 77 95 95 ALA ALA C . n B 2 78 ASP 78 96 96 ASP ASP C . n B 2 79 SER 79 97 97 SER SER C . n B 2 80 ALA 80 98 98 ALA ALA C . n B 2 81 THR 81 99 99 THR THR C . n B 2 82 TYR 82 100 100 TYR TYR C . n B 2 83 TYR 83 101 101 TYR TYR C . n B 2 84 CYS 84 102 102 CYS CYS C . n B 2 85 LYS 85 103 103 LYS LYS C . n B 2 86 ALA 86 104 104 ALA ALA C . n B 2 87 LEU 87 105 105 LEU LEU C . n B 2 88 ILE 88 106 106 ILE ILE C . n B 2 89 ASN 89 107 107 ASN ASN C . n B 2 90 THR 90 108 108 THR THR C . n B 2 91 GLY 91 109 109 GLY GLY C . n B 2 92 LYS 92 110 110 LYS LYS C . n B 2 93 ASP 93 111 111 ASP ASP C . n B 2 94 CYS 94 112 112 CYS CYS C . n B 2 95 THR 95 113 113 THR THR C . n B 2 96 MET 96 114 114 MET MET C . n B 2 97 ASN 97 115 115 ASN ASN C . n B 2 98 PHE 98 116 116 PHE PHE C . n B 2 99 HIS 99 117 117 HIS HIS C . n B 2 100 TYR 100 118 118 TYR TYR C . n B 2 101 ASP 101 119 119 ASP ASP C . n B 2 102 GLY 102 120 120 GLY GLY C . n B 2 103 ALA 103 121 121 ALA ALA C . n B 2 104 GLY 104 122 122 GLY GLY C . n B 2 105 THR 105 123 123 THR THR C . n B 2 106 VAL 106 124 124 VAL VAL C . n B 2 107 LEU 107 125 125 LEU LEU C . n B 2 108 THR 108 126 126 THR THR C . n B 2 109 VAL 109 127 127 VAL VAL C . n B 2 110 ASN 110 128 128 ASN ASN C . n B 2 111 GLN 111 129 129 GLN GLN C . n B 2 112 HIS 112 130 ? ? ? C . n B 2 113 HIS 113 131 ? ? ? C . n B 2 114 HIS 114 132 ? ? ? C . n B 2 115 HIS 115 133 ? ? ? C . n B 2 116 HIS 116 134 ? ? ? C . n B 2 117 HIS 117 135 ? ? ? C . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email aihar001@umn.edu _pdbx_contact_author.name_first Hideki _pdbx_contact_author.name_last Aihara _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7508-6230 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO 1 601 601 EDO EDO A . D 4 NAG 1 602 602 NAG NAG A . E 3 EDO 1 603 1 EDO EDO A . F 5 CL 1 201 1 CL CL C . G 6 HOH 1 701 122 HOH HOH A . G 6 HOH 2 702 32 HOH HOH A . G 6 HOH 3 703 51 HOH HOH A . G 6 HOH 4 704 121 HOH HOH A . G 6 HOH 5 705 45 HOH HOH A . G 6 HOH 6 706 125 HOH HOH A . G 6 HOH 7 707 76 HOH HOH A . G 6 HOH 8 708 49 HOH HOH A . G 6 HOH 9 709 25 HOH HOH A . G 6 HOH 10 710 50 HOH HOH A . G 6 HOH 11 711 91 HOH HOH A . G 6 HOH 12 712 68 HOH HOH A . G 6 HOH 13 713 1 HOH HOH A . G 6 HOH 14 714 28 HOH HOH A . G 6 HOH 15 715 41 HOH HOH A . G 6 HOH 16 716 74 HOH HOH A . G 6 HOH 17 717 52 HOH HOH A . G 6 HOH 18 718 97 HOH HOH A . G 6 HOH 19 719 20 HOH HOH A . G 6 HOH 20 720 26 HOH HOH A . G 6 HOH 21 721 4 HOH HOH A . G 6 HOH 22 722 116 HOH HOH A . G 6 HOH 23 723 11 HOH HOH A . G 6 HOH 24 724 59 HOH HOH A . G 6 HOH 25 725 14 HOH HOH A . G 6 HOH 26 726 12 HOH HOH A . G 6 HOH 27 727 98 HOH HOH A . G 6 HOH 28 728 39 HOH HOH A . G 6 HOH 29 729 33 HOH HOH A . G 6 HOH 30 730 23 HOH HOH A . G 6 HOH 31 731 24 HOH HOH A . G 6 HOH 32 732 79 HOH HOH A . G 6 HOH 33 733 61 HOH HOH A . G 6 HOH 34 734 44 HOH HOH A . G 6 HOH 35 735 15 HOH HOH A . G 6 HOH 36 736 70 HOH HOH A . G 6 HOH 37 737 35 HOH HOH A . G 6 HOH 38 738 78 HOH HOH A . G 6 HOH 39 739 6 HOH HOH A . G 6 HOH 40 740 31 HOH HOH A . G 6 HOH 41 741 56 HOH HOH A . G 6 HOH 42 742 47 HOH HOH A . G 6 HOH 43 743 93 HOH HOH A . G 6 HOH 44 744 66 HOH HOH A . G 6 HOH 45 745 30 HOH HOH A . G 6 HOH 46 746 53 HOH HOH A . G 6 HOH 47 747 3 HOH HOH A . G 6 HOH 48 748 19 HOH HOH A . G 6 HOH 49 749 64 HOH HOH A . G 6 HOH 50 750 65 HOH HOH A . G 6 HOH 51 751 22 HOH HOH A . G 6 HOH 52 752 114 HOH HOH A . G 6 HOH 53 753 17 HOH HOH A . G 6 HOH 54 754 106 HOH HOH A . G 6 HOH 55 755 18 HOH HOH A . G 6 HOH 56 756 62 HOH HOH A . G 6 HOH 57 757 46 HOH HOH A . G 6 HOH 58 758 83 HOH HOH A . G 6 HOH 59 759 8 HOH HOH A . G 6 HOH 60 760 80 HOH HOH A . G 6 HOH 61 761 88 HOH HOH A . G 6 HOH 62 762 40 HOH HOH A . G 6 HOH 63 763 84 HOH HOH A . G 6 HOH 64 764 43 HOH HOH A . G 6 HOH 65 765 118 HOH HOH A . G 6 HOH 66 766 5 HOH HOH A . G 6 HOH 67 767 77 HOH HOH A . G 6 HOH 68 768 63 HOH HOH A . G 6 HOH 69 769 36 HOH HOH A . G 6 HOH 70 770 126 HOH HOH A . G 6 HOH 71 771 42 HOH HOH A . G 6 HOH 72 772 99 HOH HOH A . G 6 HOH 73 773 112 HOH HOH A . G 6 HOH 74 774 27 HOH HOH A . G 6 HOH 75 775 85 HOH HOH A . G 6 HOH 76 776 109 HOH HOH A . G 6 HOH 77 777 120 HOH HOH A . G 6 HOH 78 778 2 HOH HOH A . G 6 HOH 79 779 54 HOH HOH A . G 6 HOH 80 780 86 HOH HOH A . G 6 HOH 81 781 117 HOH HOH A . G 6 HOH 82 782 87 HOH HOH A . G 6 HOH 83 783 110 HOH HOH A . G 6 HOH 84 784 124 HOH HOH A . G 6 HOH 85 785 92 HOH HOH A . G 6 HOH 86 786 90 HOH HOH A . G 6 HOH 87 787 115 HOH HOH A . G 6 HOH 88 788 123 HOH HOH A . G 6 HOH 89 789 75 HOH HOH A . G 6 HOH 90 790 69 HOH HOH A . G 6 HOH 91 791 130 HOH HOH A . G 6 HOH 92 792 67 HOH HOH A . G 6 HOH 93 793 107 HOH HOH A . G 6 HOH 94 794 101 HOH HOH A . H 6 HOH 1 301 29 HOH HOH C . H 6 HOH 2 302 81 HOH HOH C . H 6 HOH 3 303 55 HOH HOH C . H 6 HOH 4 304 119 HOH HOH C . H 6 HOH 5 305 95 HOH HOH C . H 6 HOH 6 306 71 HOH HOH C . H 6 HOH 7 307 37 HOH HOH C . H 6 HOH 8 308 9 HOH HOH C . H 6 HOH 9 309 13 HOH HOH C . H 6 HOH 10 310 60 HOH HOH C . H 6 HOH 11 311 73 HOH HOH C . H 6 HOH 12 312 34 HOH HOH C . H 6 HOH 13 313 102 HOH HOH C . H 6 HOH 14 314 72 HOH HOH C . H 6 HOH 15 315 100 HOH HOH C . H 6 HOH 16 316 96 HOH HOH C . H 6 HOH 17 317 7 HOH HOH C . H 6 HOH 18 318 129 HOH HOH C . H 6 HOH 19 319 21 HOH HOH C . H 6 HOH 20 320 82 HOH HOH C . H 6 HOH 21 321 38 HOH HOH C . H 6 HOH 22 322 57 HOH HOH C . H 6 HOH 23 323 128 HOH HOH C . H 6 HOH 24 324 94 HOH HOH C . H 6 HOH 25 325 105 HOH HOH C . H 6 HOH 26 326 103 HOH HOH C . H 6 HOH 27 327 108 HOH HOH C . H 6 HOH 28 328 10 HOH HOH C . H 6 HOH 29 329 16 HOH HOH C . H 6 HOH 30 330 104 HOH HOH C . H 6 HOH 31 331 58 HOH HOH C . H 6 HOH 32 332 89 HOH HOH C . H 6 HOH 33 333 127 HOH HOH C . H 6 HOH 34 334 111 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2310 ? 1 MORE -9 ? 1 'SSA (A^2)' 15090 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-01-05 2 'Structure model' 1 1 2023-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' pdbx_initial_refinement_model # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x+1/2,-y,-z+1/2 3 -x,y,-z 4 -x+1/2,-y,z+1/2 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 7.8522088651 12.1333583224 12.4364543349 0.36411027395 ? -0.000869322921484 ? -0.03203914321 ? 0.567800244011 ? -0.0364495785933 ? 0.45414331512 ? 5.3009034456 ? -3.23656075135 ? 0.20364809488 ? 3.68148861341 ? -2.56531379802 ? 3.75281833426 ? -0.299111611608 ? 0.0216983246675 ? -0.00214336337249 ? 0.778661873024 ? 0.175753622122 ? 0.572763267426 ? -0.812148747014 ? -0.157376743208 ? -0.337693731468 ? 2 'X-RAY DIFFRACTION' ? refined 13.3293667216 13.6145750244 5.98147337875 0.507283117902 ? -0.024522005709 ? -0.111191099514 ? 0.489727316432 ? 0.0171317737264 ? 0.416391881714 ? 7.58917247997 ? -5.50483129838 ? 1.64260786181 ? 4.52985890326 ? -2.21739519334 ? 2.15504948374 ? 0.18978773427 ? 0.675265003813 ? 0.200873026372 ? -0.754981486424 ? -0.144198527697 ? 0.220476437515 ? -0.210216783986 ? 0.0892410080304 ? -0.0677416230545 ? 3 'X-RAY DIFFRACTION' ? refined 12.7898454671 23.62961065 19.9385285458 0.928709740306 ? 0.138583477861 ? 0.0878264269417 ? 0.724069697636 ? -0.0185333229475 ? 0.681238372699 ? 1.24145896951 ? -3.29533611457 ? 2.09576498044 ? 9.89017688807 ? -6.44586688856 ? 4.24590416119 ? -0.133529907381 ? 0.377743993544 ? 0.596461984117 ? 1.61371507644 ? 0.310229225295 ? 0.675328628254 ? -2.57801645159 ? -0.689875612452 ? -0.25775240653 ? 4 'X-RAY DIFFRACTION' ? refined 22.9130048347 16.733955653 13.3908544998 0.454553425021 ? -0.132140256218 ? -0.0258033173727 ? 0.597528982303 ? -0.0243238049141 ? 0.337838977676 ? 2.78264399747 ? -0.731388983501 ? -0.27976172986 ? 3.40774073286 ? 0.348666150538 ? 2.87321133609 ? 0.0740219497088 ? -0.102769957385 ? 0.296736238003 ? -0.172589141375 ? -0.120807660275 ? -0.0288053192315 ? -0.428452621714 ? 0.484112460212 ? 0.0494981744412 ? 5 'X-RAY DIFFRACTION' ? refined 24.1256644262 1.40650097104 14.9309134911 0.300544444945 ? -0.0385226392593 ? -0.00723827467305 ? 0.540552639183 ? 0.00584698319779 ? 0.306517785346 ? 1.84041252128 ? -0.479083527932 ? 0.0100743110461 ? 1.38395899962 ? 0.503309298045 ? 1.04638670091 ? 0.0300711697741 ? 0.168190477226 ? -0.130355918957 ? -0.109292836045 ? -0.110480897771 ? 0.0128901019562 ? 0.00920948226728 ? 0.24162842745 ? 0.0713071279332 ? 6 'X-RAY DIFFRACTION' ? refined 13.8541443686 28.1516886314 -0.448699677756 0.890319372173 ? -0.160654649483 ? -0.134382178059 ? 0.689204559016 ? 0.0262950806355 ? 0.491893871317 ? 5.01654211072 ? 0.187768973908 ? -2.13507420794 ? 5.00678285227 ? -2.09733592541 ? 5.80552411608 ? 0.189595670762 ? 0.679715067585 ? 0.694277714848 ? -1.27664328804 ? 0.297061200711 ? -0.181497199662 ? -0.537608596552 ? -0.276422873156 ? -0.0765566550213 ? 7 'X-RAY DIFFRACTION' ? refined 12.2310516772 -17.9122623383 13.4514429232 0.431869277894 ? -0.0183738446721 ? 0.0480332351156 ? 0.461479607762 ? -0.0365196097077 ? 0.348716229902 ? 3.31405714091 ? 1.57655135205 ? -0.161672584379 ? 5.45830781538 ? -1.78436970947 ? 4.09109221828 ? -0.0590226787227 ? -0.169053010054 ? -0.413004208526 ? 0.111986941003 ? -0.0347640582349 ? -0.0772521048977 ? 0.500540816311 ? -0.15798952879 ? 0.0908777545322 ? 8 'X-RAY DIFFRACTION' ? refined 14.264879886 -19.3794671295 4.79940920421 0.652981930389 ? -0.0109639363663 ? 0.136517118476 ? 0.582313119267 ? -0.0678327084744 ? 0.346994645418 ? 6.9159197304 ? -2.20694773045 ? 5.09834807464 ? 8.21984616843 ? -4.18437794556 ? 4.70941324332 ? 0.171781217999 ? 0.596273772827 ? -0.600904080025 ? -1.10856771967 ? 0.0341506580701 ? 0.0256453405185 ? 1.17455528054 ? 0.0366851978918 ? -0.101376919532 ? 9 'X-RAY DIFFRACTION' ? refined 11.5146126891 -14.4320663963 13.6951624358 0.331298931446 ? -0.0380847849041 ? 0.0200533686994 ? 0.571823587823 ? 0.013968865986 ? 0.365376041282 ? 3.0538580773 ? 2.08308025685 ? 0.046497819244 ? 5.17168689411 ? -0.800528991551 ? 3.90803241528 ? 0.0472228297694 ? -0.282415643271 ? -0.391969537061 ? 0.155990854549 ? -0.149337823765 ? -0.150788103628 ? 0.380360929668 ? -0.267903143059 ? -0.044810273663 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 A 1 A 334 ? A 16 A 349 ? ? ;chain 'A' and (resid 334 through 349 ) ; 2 'X-RAY DIFFRACTION' 2 A 17 A 350 ? A 31 A 364 ? ? ;chain 'A' and (resid 350 through 364 ) ; 3 'X-RAY DIFFRACTION' 3 A 32 A 365 ? A 42 A 375 ? ? ;chain 'A' and (resid 365 through 375 ) ; 4 'X-RAY DIFFRACTION' 4 A 43 A 376 ? A 88 A 421 ? ? ;chain 'A' and (resid 376 through 421 ) ; 5 'X-RAY DIFFRACTION' 5 A 89 A 422 ? A 183 A 516 ? ? ;chain 'A' and (resid 422 through 516 ) ; 6 'X-RAY DIFFRACTION' 6 A 184 A 517 ? A 195 A 528 ? ? ;chain 'A' and (resid 517 through 528 ) ; 7 'X-RAY DIFFRACTION' 7 D 1 C 20 ? D 54 C 73 ? ? ;chain 'C' and (resid 20 through 73 ) ; 8 'X-RAY DIFFRACTION' 8 D 55 C 74 ? D 70 C 89 ? ? ;chain 'C' and (resid 74 through 89 ) ; 9 'X-RAY DIFFRACTION' 9 D 71 C 90 ? D 110 C 129 ? ? ;chain 'C' and (resid 90 through 129 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20rc3_4406 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_entry_details.entry_id 7SPP _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HH11 A ARG 408 ? ? O A HOH 703 ? ? 1.52 2 1 H A CYS 480 ? ? O A HOH 705 ? ? 1.56 3 1 OD1 A ASN 450 ? B O A HOH 701 ? ? 2.15 4 1 O A ASN 448 ? ? O A HOH 702 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 422 ? ? -130.53 -49.38 2 1 ASP A 428 ? ? -96.01 34.29 3 1 PRO A 527 ? ? -64.12 3.64 4 1 THR C 53 ? ? -98.26 -61.50 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 319 ? A ARG 1 2 1 Y 1 A VAL 320 ? A VAL 2 3 1 Y 1 A GLN 321 ? A GLN 3 4 1 Y 1 A PRO 322 ? A PRO 4 5 1 Y 1 A THR 323 ? A THR 5 6 1 Y 1 A GLU 324 ? A GLU 6 7 1 Y 1 A SER 325 ? A SER 7 8 1 Y 1 A ILE 326 ? A ILE 8 9 1 Y 1 A VAL 327 ? A VAL 9 10 1 Y 1 A ARG 328 ? A ARG 10 11 1 Y 1 A PHE 329 ? A PHE 11 12 1 Y 1 A PRO 330 ? A PRO 12 13 1 Y 1 A ASN 331 ? A ASN 13 14 1 Y 1 A ILE 332 ? A ILE 14 15 1 Y 1 A THR 333 ? A THR 15 16 1 Y 1 A LYS 529 ? A LYS 211 17 1 Y 1 A SER 530 ? A SER 212 18 1 Y 1 A THR 531 ? A THR 213 19 1 Y 1 A ASN 532 ? A ASN 214 20 1 Y 1 A LEU 533 ? A LEU 215 21 1 Y 1 A VAL 534 ? A VAL 216 22 1 Y 1 A LYS 535 ? A LYS 217 23 1 Y 1 A HIS 536 ? A HIS 218 24 1 Y 1 A HIS 537 ? A HIS 219 25 1 Y 1 A HIS 538 ? A HIS 220 26 1 Y 1 A HIS 539 ? A HIS 221 27 1 Y 1 A HIS 540 ? A HIS 222 28 1 Y 1 A HIS 541 ? A HIS 223 29 1 Y 1 A HIS 542 ? A HIS 224 30 1 Y 1 A HIS 543 ? A HIS 225 31 1 Y 1 C MET 19 ? B MET 1 32 1 Y 1 C HIS 130 ? B HIS 112 33 1 Y 1 C HIS 131 ? B HIS 113 34 1 Y 1 C HIS 132 ? B HIS 114 35 1 Y 1 C HIS 133 ? B HIS 115 36 1 Y 1 C HIS 134 ? B HIS 116 37 1 Y 1 C HIS 135 ? B HIS 117 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 EDO C1 C N N 89 EDO O1 O N N 90 EDO C2 C N N 91 EDO O2 O N N 92 EDO H11 H N N 93 EDO H12 H N N 94 EDO HO1 H N N 95 EDO H21 H N N 96 EDO H22 H N N 97 EDO HO2 H N N 98 GLN N N N N 99 GLN CA C N S 100 GLN C C N N 101 GLN O O N N 102 GLN CB C N N 103 GLN CG C N N 104 GLN CD C N N 105 GLN OE1 O N N 106 GLN NE2 N N N 107 GLN OXT O N N 108 GLN H H N N 109 GLN H2 H N N 110 GLN HA H N N 111 GLN HB2 H N N 112 GLN HB3 H N N 113 GLN HG2 H N N 114 GLN HG3 H N N 115 GLN HE21 H N N 116 GLN HE22 H N N 117 GLN HXT H N N 118 GLU N N N N 119 GLU CA C N S 120 GLU C C N N 121 GLU O O N N 122 GLU CB C N N 123 GLU CG C N N 124 GLU CD C N N 125 GLU OE1 O N N 126 GLU OE2 O N N 127 GLU OXT O N N 128 GLU H H N N 129 GLU H2 H N N 130 GLU HA H N N 131 GLU HB2 H N N 132 GLU HB3 H N N 133 GLU HG2 H N N 134 GLU HG3 H N N 135 GLU HE2 H N N 136 GLU HXT H N N 137 GLY N N N N 138 GLY CA C N N 139 GLY C C N N 140 GLY O O N N 141 GLY OXT O N N 142 GLY H H N N 143 GLY H2 H N N 144 GLY HA2 H N N 145 GLY HA3 H N N 146 GLY HXT H N N 147 HIS N N N N 148 HIS CA C N S 149 HIS C C N N 150 HIS O O N N 151 HIS CB C N N 152 HIS CG C Y N 153 HIS ND1 N Y N 154 HIS CD2 C Y N 155 HIS CE1 C Y N 156 HIS NE2 N Y N 157 HIS OXT O N N 158 HIS H H N N 159 HIS H2 H N N 160 HIS HA H N N 161 HIS HB2 H N N 162 HIS HB3 H N N 163 HIS HD1 H N N 164 HIS HD2 H N N 165 HIS HE1 H N N 166 HIS HE2 H N N 167 HIS HXT H N N 168 HOH O O N N 169 HOH H1 H N N 170 HOH H2 H N N 171 ILE N N N N 172 ILE CA C N S 173 ILE C C N N 174 ILE O O N N 175 ILE CB C N S 176 ILE CG1 C N N 177 ILE CG2 C N N 178 ILE CD1 C N N 179 ILE OXT O N N 180 ILE H H N N 181 ILE H2 H N N 182 ILE HA H N N 183 ILE HB H N N 184 ILE HG12 H N N 185 ILE HG13 H N N 186 ILE HG21 H N N 187 ILE HG22 H N N 188 ILE HG23 H N N 189 ILE HD11 H N N 190 ILE HD12 H N N 191 ILE HD13 H N N 192 ILE HXT H N N 193 LEU N N N N 194 LEU CA C N S 195 LEU C C N N 196 LEU O O N N 197 LEU CB C N N 198 LEU CG C N N 199 LEU CD1 C N N 200 LEU CD2 C N N 201 LEU OXT O N N 202 LEU H H N N 203 LEU H2 H N N 204 LEU HA H N N 205 LEU HB2 H N N 206 LEU HB3 H N N 207 LEU HG H N N 208 LEU HD11 H N N 209 LEU HD12 H N N 210 LEU HD13 H N N 211 LEU HD21 H N N 212 LEU HD22 H N N 213 LEU HD23 H N N 214 LEU HXT H N N 215 LYS N N N N 216 LYS CA C N S 217 LYS C C N N 218 LYS O O N N 219 LYS CB C N N 220 LYS CG C N N 221 LYS CD C N N 222 LYS CE C N N 223 LYS NZ N N N 224 LYS OXT O N N 225 LYS H H N N 226 LYS H2 H N N 227 LYS HA H N N 228 LYS HB2 H N N 229 LYS HB3 H N N 230 LYS HG2 H N N 231 LYS HG3 H N N 232 LYS HD2 H N N 233 LYS HD3 H N N 234 LYS HE2 H N N 235 LYS HE3 H N N 236 LYS HZ1 H N N 237 LYS HZ2 H N N 238 LYS HZ3 H N N 239 LYS HXT H N N 240 MET N N N N 241 MET CA C N S 242 MET C C N N 243 MET O O N N 244 MET CB C N N 245 MET CG C N N 246 MET SD S N N 247 MET CE C N N 248 MET OXT O N N 249 MET H H N N 250 MET H2 H N N 251 MET HA H N N 252 MET HB2 H N N 253 MET HB3 H N N 254 MET HG2 H N N 255 MET HG3 H N N 256 MET HE1 H N N 257 MET HE2 H N N 258 MET HE3 H N N 259 MET HXT H N N 260 NAG C1 C N R 261 NAG C2 C N R 262 NAG C3 C N R 263 NAG C4 C N S 264 NAG C5 C N R 265 NAG C6 C N N 266 NAG C7 C N N 267 NAG C8 C N N 268 NAG N2 N N N 269 NAG O1 O N N 270 NAG O3 O N N 271 NAG O4 O N N 272 NAG O5 O N N 273 NAG O6 O N N 274 NAG O7 O N N 275 NAG H1 H N N 276 NAG H2 H N N 277 NAG H3 H N N 278 NAG H4 H N N 279 NAG H5 H N N 280 NAG H61 H N N 281 NAG H62 H N N 282 NAG H81 H N N 283 NAG H82 H N N 284 NAG H83 H N N 285 NAG HN2 H N N 286 NAG HO1 H N N 287 NAG HO3 H N N 288 NAG HO4 H N N 289 NAG HO6 H N N 290 PHE N N N N 291 PHE CA C N S 292 PHE C C N N 293 PHE O O N N 294 PHE CB C N N 295 PHE CG C Y N 296 PHE CD1 C Y N 297 PHE CD2 C Y N 298 PHE CE1 C Y N 299 PHE CE2 C Y N 300 PHE CZ C Y N 301 PHE OXT O N N 302 PHE H H N N 303 PHE H2 H N N 304 PHE HA H N N 305 PHE HB2 H N N 306 PHE HB3 H N N 307 PHE HD1 H N N 308 PHE HD2 H N N 309 PHE HE1 H N N 310 PHE HE2 H N N 311 PHE HZ H N N 312 PHE HXT H N N 313 PRO N N N N 314 PRO CA C N S 315 PRO C C N N 316 PRO O O N N 317 PRO CB C N N 318 PRO CG C N N 319 PRO CD C N N 320 PRO OXT O N N 321 PRO H H N N 322 PRO HA H N N 323 PRO HB2 H N N 324 PRO HB3 H N N 325 PRO HG2 H N N 326 PRO HG3 H N N 327 PRO HD2 H N N 328 PRO HD3 H N N 329 PRO HXT H N N 330 SER N N N N 331 SER CA C N S 332 SER C C N N 333 SER O O N N 334 SER CB C N N 335 SER OG O N N 336 SER OXT O N N 337 SER H H N N 338 SER H2 H N N 339 SER HA H N N 340 SER HB2 H N N 341 SER HB3 H N N 342 SER HG H N N 343 SER HXT H N N 344 THR N N N N 345 THR CA C N S 346 THR C C N N 347 THR O O N N 348 THR CB C N R 349 THR OG1 O N N 350 THR CG2 C N N 351 THR OXT O N N 352 THR H H N N 353 THR H2 H N N 354 THR HA H N N 355 THR HB H N N 356 THR HG1 H N N 357 THR HG21 H N N 358 THR HG22 H N N 359 THR HG23 H N N 360 THR HXT H N N 361 TRP N N N N 362 TRP CA C N S 363 TRP C C N N 364 TRP O O N N 365 TRP CB C N N 366 TRP CG C Y N 367 TRP CD1 C Y N 368 TRP CD2 C Y N 369 TRP NE1 N Y N 370 TRP CE2 C Y N 371 TRP CE3 C Y N 372 TRP CZ2 C Y N 373 TRP CZ3 C Y N 374 TRP CH2 C Y N 375 TRP OXT O N N 376 TRP H H N N 377 TRP H2 H N N 378 TRP HA H N N 379 TRP HB2 H N N 380 TRP HB3 H N N 381 TRP HD1 H N N 382 TRP HE1 H N N 383 TRP HE3 H N N 384 TRP HZ2 H N N 385 TRP HZ3 H N N 386 TRP HH2 H N N 387 TRP HXT H N N 388 TYR N N N N 389 TYR CA C N S 390 TYR C C N N 391 TYR O O N N 392 TYR CB C N N 393 TYR CG C Y N 394 TYR CD1 C Y N 395 TYR CD2 C Y N 396 TYR CE1 C Y N 397 TYR CE2 C Y N 398 TYR CZ C Y N 399 TYR OH O N N 400 TYR OXT O N N 401 TYR H H N N 402 TYR H2 H N N 403 TYR HA H N N 404 TYR HB2 H N N 405 TYR HB3 H N N 406 TYR HD1 H N N 407 TYR HD2 H N N 408 TYR HE1 H N N 409 TYR HE2 H N N 410 TYR HH H N N 411 TYR HXT H N N 412 VAL N N N N 413 VAL CA C N S 414 VAL C C N N 415 VAL O O N N 416 VAL CB C N N 417 VAL CG1 C N N 418 VAL CG2 C N N 419 VAL OXT O N N 420 VAL H H N N 421 VAL H2 H N N 422 VAL HA H N N 423 VAL HB H N N 424 VAL HG11 H N N 425 VAL HG12 H N N 426 VAL HG13 H N N 427 VAL HG21 H N N 428 VAL HG22 H N N 429 VAL HG23 H N N 430 VAL HXT H N N 431 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 NAG C1 C2 sing N N 246 NAG C1 O1 sing N N 247 NAG C1 O5 sing N N 248 NAG C1 H1 sing N N 249 NAG C2 C3 sing N N 250 NAG C2 N2 sing N N 251 NAG C2 H2 sing N N 252 NAG C3 C4 sing N N 253 NAG C3 O3 sing N N 254 NAG C3 H3 sing N N 255 NAG C4 C5 sing N N 256 NAG C4 O4 sing N N 257 NAG C4 H4 sing N N 258 NAG C5 C6 sing N N 259 NAG C5 O5 sing N N 260 NAG C5 H5 sing N N 261 NAG C6 O6 sing N N 262 NAG C6 H61 sing N N 263 NAG C6 H62 sing N N 264 NAG C7 C8 sing N N 265 NAG C7 N2 sing N N 266 NAG C7 O7 doub N N 267 NAG C8 H81 sing N N 268 NAG C8 H82 sing N N 269 NAG C8 H83 sing N N 270 NAG N2 HN2 sing N N 271 NAG O1 HO1 sing N N 272 NAG O3 HO3 sing N N 273 NAG O4 HO4 sing N N 274 NAG O6 HO6 sing N N 275 PHE N CA sing N N 276 PHE N H sing N N 277 PHE N H2 sing N N 278 PHE CA C sing N N 279 PHE CA CB sing N N 280 PHE CA HA sing N N 281 PHE C O doub N N 282 PHE C OXT sing N N 283 PHE CB CG sing N N 284 PHE CB HB2 sing N N 285 PHE CB HB3 sing N N 286 PHE CG CD1 doub Y N 287 PHE CG CD2 sing Y N 288 PHE CD1 CE1 sing Y N 289 PHE CD1 HD1 sing N N 290 PHE CD2 CE2 doub Y N 291 PHE CD2 HD2 sing N N 292 PHE CE1 CZ doub Y N 293 PHE CE1 HE1 sing N N 294 PHE CE2 CZ sing Y N 295 PHE CE2 HE2 sing N N 296 PHE CZ HZ sing N N 297 PHE OXT HXT sing N N 298 PRO N CA sing N N 299 PRO N CD sing N N 300 PRO N H sing N N 301 PRO CA C sing N N 302 PRO CA CB sing N N 303 PRO CA HA sing N N 304 PRO C O doub N N 305 PRO C OXT sing N N 306 PRO CB CG sing N N 307 PRO CB HB2 sing N N 308 PRO CB HB3 sing N N 309 PRO CG CD sing N N 310 PRO CG HG2 sing N N 311 PRO CG HG3 sing N N 312 PRO CD HD2 sing N N 313 PRO CD HD3 sing N N 314 PRO OXT HXT sing N N 315 SER N CA sing N N 316 SER N H sing N N 317 SER N H2 sing N N 318 SER CA C sing N N 319 SER CA CB sing N N 320 SER CA HA sing N N 321 SER C O doub N N 322 SER C OXT sing N N 323 SER CB OG sing N N 324 SER CB HB2 sing N N 325 SER CB HB3 sing N N 326 SER OG HG sing N N 327 SER OXT HXT sing N N 328 THR N CA sing N N 329 THR N H sing N N 330 THR N H2 sing N N 331 THR CA C sing N N 332 THR CA CB sing N N 333 THR CA HA sing N N 334 THR C O doub N N 335 THR C OXT sing N N 336 THR CB OG1 sing N N 337 THR CB CG2 sing N N 338 THR CB HB sing N N 339 THR OG1 HG1 sing N N 340 THR CG2 HG21 sing N N 341 THR CG2 HG22 sing N N 342 THR CG2 HG23 sing N N 343 THR OXT HXT sing N N 344 TRP N CA sing N N 345 TRP N H sing N N 346 TRP N H2 sing N N 347 TRP CA C sing N N 348 TRP CA CB sing N N 349 TRP CA HA sing N N 350 TRP C O doub N N 351 TRP C OXT sing N N 352 TRP CB CG sing N N 353 TRP CB HB2 sing N N 354 TRP CB HB3 sing N N 355 TRP CG CD1 doub Y N 356 TRP CG CD2 sing Y N 357 TRP CD1 NE1 sing Y N 358 TRP CD1 HD1 sing N N 359 TRP CD2 CE2 doub Y N 360 TRP CD2 CE3 sing Y N 361 TRP NE1 CE2 sing Y N 362 TRP NE1 HE1 sing N N 363 TRP CE2 CZ2 sing Y N 364 TRP CE3 CZ3 doub Y N 365 TRP CE3 HE3 sing N N 366 TRP CZ2 CH2 doub Y N 367 TRP CZ2 HZ2 sing N N 368 TRP CZ3 CH2 sing Y N 369 TRP CZ3 HZ3 sing N N 370 TRP CH2 HH2 sing N N 371 TRP OXT HXT sing N N 372 TYR N CA sing N N 373 TYR N H sing N N 374 TYR N H2 sing N N 375 TYR CA C sing N N 376 TYR CA CB sing N N 377 TYR CA HA sing N N 378 TYR C O doub N N 379 TYR C OXT sing N N 380 TYR CB CG sing N N 381 TYR CB HB2 sing N N 382 TYR CB HB3 sing N N 383 TYR CG CD1 doub Y N 384 TYR CG CD2 sing Y N 385 TYR CD1 CE1 sing Y N 386 TYR CD1 HD1 sing N N 387 TYR CD2 CE2 doub Y N 388 TYR CD2 HD2 sing N N 389 TYR CE1 CZ doub Y N 390 TYR CE1 HE1 sing N N 391 TYR CE2 CZ sing Y N 392 TYR CE2 HE2 sing N N 393 TYR CZ OH sing N N 394 TYR OH HH sing N N 395 TYR OXT HXT sing N N 396 VAL N CA sing N N 397 VAL N H sing N N 398 VAL N H2 sing N N 399 VAL CA C sing N N 400 VAL CA CB sing N N 401 VAL CA HA sing N N 402 VAL C O doub N N 403 VAL C OXT sing N N 404 VAL CB CG1 sing N N 405 VAL CB CG2 sing N N 406 VAL CB HB sing N N 407 VAL CG1 HG11 sing N N 408 VAL CG1 HG12 sing N N 409 VAL CG1 HG13 sing N N 410 VAL CG2 HG21 sing N N 411 VAL CG2 HG22 sing N N 412 VAL CG2 HG23 sing N N 413 VAL OXT HXT sing N N 414 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' GM118047 1 'National Institutes of Health/National Library of Medicine (NIH/NLM)' 'United States' 5T32GM008347-23 2 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 1,2-ETHANEDIOL EDO 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 'CHLORIDE ION' CL 6 water HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 6YM0 6YM0,4HGK 2 ? 'experimental model' PDB 4HGK 6YM0,4HGK # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 21 2 21' _space_group.name_Hall 'P 2 2ab (y,z,x)' _space_group.IT_number 18 _space_group.crystal_system orthorhombic _space_group.id 1 #