HEADER UNKNOWN FUNCTION 03-NOV-21 7SPQ TITLE CRYSTAL STRUCTURE OF BURKHOLDERIA GLUMAE TOXOFLAVIN BIOSYNTHESIS TITLE 2 PROTEIN TOXD COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE KINASE TOXD; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA GLUMAE; SOURCE 3 ORGANISM_TAXID: 626418; SOURCE 4 STRAIN: BGR1; SOURCE 5 GENE: BGLU_2G06430; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PTHT KEYWDS TOXOFLAVIN, BIOSYNTHESIS PROTEIN, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR M.K.FENWICK,B.PHILMUS,S.E.EALICK REVDAT 2 03-APR-24 7SPQ 1 REMARK REVDAT 1 10-MAY-23 7SPQ 0 JRNL AUTH M.K.FENWICK,T.P.BEGLEY,S.E.EALICK,B.PHILMUS JRNL TITL CRYSTAL STRUCTURE OF BURKHOLDERIA GLUMAE TOXOFLAVIN JRNL TITL 2 BIOSYNTHESIS PROTEIN TOXD JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1_4122 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 38274 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.137 REMARK 3 R VALUE (WORKING SET) : 0.135 REMARK 3 FREE R VALUE : 0.167 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1914 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.0000 - 4.3400 1.00 2721 150 0.1195 0.1581 REMARK 3 2 4.3400 - 3.4500 1.00 2664 126 0.1087 0.1395 REMARK 3 3 3.4500 - 3.0100 1.00 2609 154 0.1360 0.1540 REMARK 3 4 3.0100 - 2.7400 1.00 2630 133 0.1341 0.1789 REMARK 3 5 2.7400 - 2.5400 1.00 2615 147 0.1404 0.1591 REMARK 3 6 2.5400 - 2.3900 1.00 2607 147 0.1371 0.1766 REMARK 3 7 2.3900 - 2.2700 1.00 2605 128 0.1402 0.1745 REMARK 3 8 2.2700 - 2.1700 1.00 2587 171 0.1372 0.1755 REMARK 3 9 2.1700 - 2.0900 1.00 2588 146 0.1405 0.1860 REMARK 3 10 2.0900 - 2.0200 1.00 2566 155 0.1480 0.1850 REMARK 3 11 2.0200 - 1.9500 1.00 2641 106 0.1637 0.1748 REMARK 3 12 1.9500 - 1.9000 1.00 2615 122 0.1644 0.1956 REMARK 3 13 1.9000 - 1.8500 1.00 2609 120 0.1856 0.2307 REMARK 3 14 1.8500 - 1.8000 0.88 2303 109 0.2257 0.2543 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.860 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.76 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2707 REMARK 3 ANGLE : 0.819 3693 REMARK 3 CHIRALITY : 0.051 371 REMARK 3 PLANARITY : 0.008 506 REMARK 3 DIHEDRAL : 12.476 1005 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.6277 -5.8672 53.6917 REMARK 3 T TENSOR REMARK 3 T11: 0.1499 T22: 0.2375 REMARK 3 T33: 0.1803 T12: -0.0379 REMARK 3 T13: -0.0304 T23: -0.0268 REMARK 3 L TENSOR REMARK 3 L11: 2.0623 L22: 7.7360 REMARK 3 L33: 6.0272 L12: -2.1402 REMARK 3 L13: 1.0343 L23: -1.2143 REMARK 3 S TENSOR REMARK 3 S11: 0.0555 S12: 0.2824 S13: -0.2660 REMARK 3 S21: -0.2501 S22: -0.0813 S23: 0.8028 REMARK 3 S31: 0.1294 S32: -0.6258 S33: 0.0087 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 28 THROUGH 256 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.1605 15.0636 56.9621 REMARK 3 T TENSOR REMARK 3 T11: 0.1328 T22: 0.1278 REMARK 3 T33: 0.1472 T12: 0.0139 REMARK 3 T13: 0.0070 T23: 0.0139 REMARK 3 L TENSOR REMARK 3 L11: 1.2167 L22: 0.8106 REMARK 3 L33: 0.9174 L12: -0.1293 REMARK 3 L13: 0.1909 L23: -0.1131 REMARK 3 S TENSOR REMARK 3 S11: 0.0145 S12: 0.1574 S13: 0.2009 REMARK 3 S21: -0.1066 S22: -0.0321 S23: -0.0407 REMARK 3 S31: -0.1184 S32: -0.0220 S33: 0.0180 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 257 THROUGH 298 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.5529 19.2246 52.9596 REMARK 3 T TENSOR REMARK 3 T11: 0.1779 T22: 0.1779 REMARK 3 T33: 0.1507 T12: 0.0491 REMARK 3 T13: -0.0039 T23: 0.0455 REMARK 3 L TENSOR REMARK 3 L11: 2.2246 L22: 2.0910 REMARK 3 L33: 1.0957 L12: 0.5010 REMARK 3 L13: 0.0401 L23: 1.0923 REMARK 3 S TENSOR REMARK 3 S11: 0.0286 S12: 0.2658 S13: 0.4497 REMARK 3 S21: -0.2560 S22: -0.0688 S23: 0.1381 REMARK 3 S31: -0.2151 S32: -0.1632 S33: 0.0408 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 299 THROUGH 326 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.0531 15.5742 55.7590 REMARK 3 T TENSOR REMARK 3 T11: 0.1376 T22: 0.1108 REMARK 3 T33: 0.1883 T12: 0.0545 REMARK 3 T13: 0.0172 T23: 0.0328 REMARK 3 L TENSOR REMARK 3 L11: 3.2465 L22: 1.0794 REMARK 3 L33: 3.2022 L12: 0.1670 REMARK 3 L13: 1.7194 L23: 1.5605 REMARK 3 S TENSOR REMARK 3 S11: 0.0087 S12: 0.0814 S13: 0.0622 REMARK 3 S21: 0.0095 S22: -0.0353 S23: 0.1876 REMARK 3 S31: 0.0547 S32: -0.0686 S33: 0.0228 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7SPQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-NOV-21. REMARK 100 THE DEPOSITION ID IS D_1000259158. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.16 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38281 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 48.075 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 20.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.51900 REMARK 200 R SYM FOR SHELL (I) : 0.51900 REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: SHELXCD REMARK 200 STARTING MODEL: UNPUBLISHED STRUCTURE OF THE SE-MET SUBSTITUTED REMARK 200 PROTEIN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.93 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: EMERALD BIOSYSTEMS WIZARD 1, REMARK 280 FORMULATION 6 [20% (W/V) PEG-3000 AND CITRATE PH 5.5], VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 67.98900 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 67.98900 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 67.98900 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 67.98900 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 67.98900 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 67.98900 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 67.98900 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 67.98900 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 67.98900 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 67.98900 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 67.98900 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 67.98900 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 67.98900 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 67.98900 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 67.98900 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 67.98900 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 67.98900 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 67.98900 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 67.98900 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 67.98900 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 67.98900 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 67.98900 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 67.98900 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 67.98900 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 67.98900 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 67.98900 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 67.98900 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 67.98900 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 67.98900 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 67.98900 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 67.98900 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 67.98900 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 67.98900 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 67.98900 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 67.98900 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 67.98900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -44.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 135.97800 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ILE A 3 REMARK 465 LYS A 4 REMARK 465 LEU A 5 REMARK 465 ALA A 6 REMARK 465 ASP A 7 REMARK 465 ASN A 8 REMARK 465 PRO A 9 REMARK 465 ASN A 10 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 11 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 258 -86.12 73.97 REMARK 500 ASN A 274 6.90 -67.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 970 DISTANCE = 6.59 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 254 O REMARK 620 2 MET A 255 O 72.3 REMARK 620 3 GLY A 257 O 79.4 109.6 REMARK 620 4 VAL A 259 O 143.4 140.4 97.0 REMARK 620 5 GLU A 261 OE2 69.5 93.8 133.0 88.6 REMARK 620 6 HOH A 661 O 70.9 139.5 79.7 72.6 57.6 REMARK 620 N 1 2 3 4 5 DBREF 7SPQ A 1 326 UNP C5AMM8 C5AMM8_BURGB 1 326 SEQADV 7SPQ GLY A -1 UNP C5AMM8 EXPRESSION TAG SEQADV 7SPQ HIS A 0 UNP C5AMM8 EXPRESSION TAG SEQRES 1 A 328 GLY HIS MET THR ILE LYS LEU ALA ASP ASN PRO ASN ARG SEQRES 2 A 328 LEU THR ASP ARG GLU ALA MET GLY LEU PRO GLU THR PHE SEQRES 3 A 328 VAL ALA ARG THR PRO VAL ALA LEU LEU ALA GLY HIS GLU SEQRES 4 A 328 ASP LEU LEU GLY ALA GLY ALA PRO CYS LEU VAL GLU ILE SEQRES 5 A 328 ALA GLU ASP PRO ALA GLN PRO PHE ALA ARG ARG HIS ALA SEQRES 6 A 328 ALA GLY ALA LEU LEU GLY LEU LEU GLY ASP PRO ARG ILE SEQRES 7 A 328 ARG PRO PHE GLU PRO ALA MET ARG ARG ILE GLU ALA ALA SEQRES 8 A 328 ARG ALA ARG ILE GLY LEU ASP PRO ALA ALA LEU GLY ARG SEQRES 9 A 328 VAL LEU ALA GLU TRP GLU ARG VAL GLY VAL ILE GLU PRO SEQRES 10 A 328 TRP ILE ALA LYS GLU CYS PRO ALA HIS THR VAL GLU LEU SEQRES 11 A 328 ALA ALA TYR ALA LEU MET ARG TYR PRO VAL SER ASN LEU SEQRES 12 A 328 GLU TYR ARG LEU PHE LEU GLU ASP THR GLY SER THR GLU SEQRES 13 A 328 LEU PRO SER SER TRP ALA PHE GLY VAL TYR PRO ALA GLU SEQRES 14 A 328 ARG SER ASN HIS PRO VAL TRP SER VAL SER ALA GLU ALA SEQRES 15 A 328 ALA ASP HIS TYR ALA ARG TRP LEU ALA GLN LYS THR GLY SEQRES 16 A 328 ARG ALA PHE ARG LEU PRO SER GLU ALA GLU TRP GLU TYR SEQRES 17 A 328 ALA ALA ALA GLY GLY ALA ALA ARG GLU TYR PRO TRP GLY SEQRES 18 A 328 ASP ALA PHE ASP PRO ALA ALA ALA ASN THR VAL GLU ALA SEQRES 19 A 328 GLY PRO LEU SER THR THR PRO VAL GLY ILE PHE PRO ALA SEQRES 20 A 328 GLY ARG SER VAL PHE GLY ILE ASP ASP MET GLY GLY ASN SEQRES 21 A 328 VAL GLU GLU TYR VAL ALA ASP ASP TYR ARG ALA TYR PRO SEQRES 22 A 328 GLY GLY ASN ALA ILE ASP ASP ASP LEU ALA VAL THR GLN SEQRES 23 A 328 GLY ALA TYR ARG VAL ALA ARG GLY GLY SER PHE THR ARG SEQRES 24 A 328 PHE GLY ASP LEU ALA ARG CYS ALA ARG ARG HIS GLY ARG SEQRES 25 A 328 TYR GLN ARG ASP ILE TYR ALA MET GLY PHE ARG LEU ALA SEQRES 26 A 328 GLU THR LEU HET CIT A 401 13 HET CA A 402 1 HET CIT A 403 13 HET PG4 A 404 13 HET 1PE A 405 16 HET PG4 A 406 13 HETNAM CIT CITRIC ACID HETNAM CA CALCIUM ION HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN 1PE PEG400 FORMUL 2 CIT 2(C6 H8 O7) FORMUL 3 CA CA 2+ FORMUL 5 PG4 2(C8 H18 O5) FORMUL 6 1PE C10 H22 O6 FORMUL 8 HOH *470(H2 O) HELIX 1 AA1 THR A 13 MET A 18 1 6 HELIX 2 AA2 HIS A 36 ALA A 42 5 7 HELIX 3 AA3 GLY A 43 GLU A 52 1 10 HELIX 4 AA4 PRO A 57 GLY A 72 1 16 HELIX 5 AA5 ASP A 96 ALA A 98 5 3 HELIX 6 AA6 ALA A 99 GLU A 108 1 10 HELIX 7 AA7 ARG A 109 GLY A 111 5 3 HELIX 8 AA8 ILE A 113 LYS A 119 1 7 HELIX 9 AA9 SER A 139 GLY A 151 1 13 HELIX 10 AB1 TRP A 159 VAL A 163 5 5 HELIX 11 AB2 PRO A 165 SER A 169 5 5 HELIX 12 AB3 SER A 177 GLY A 193 1 17 HELIX 13 AB4 SER A 200 GLY A 210 1 11 HELIX 14 AB5 PHE A 243 ARG A 247 5 5 HELIX 15 AB6 ASP A 279 GLN A 284 1 6 HELIX 16 AB7 PHE A 298 ARG A 303 5 6 SHEET 1 AA1 4 MET A 83 ILE A 86 0 SHEET 2 AA1 4 TYR A 131 MET A 134 -1 O TYR A 131 N ILE A 86 SHEET 3 AA1 4 ALA A 323 THR A 325 -1 O GLU A 324 N ALA A 132 SHEET 4 AA1 4 PHE A 196 ARG A 197 -1 N ARG A 197 O ALA A 323 SHEET 1 AA2 2 ALA A 89 ILE A 93 0 SHEET 2 AA2 2 HIS A 124 LEU A 128 -1 O HIS A 124 N ILE A 93 SHEET 1 AA3 3 ARG A 288 ARG A 291 0 SHEET 2 AA3 3 GLU A 260 ASP A 266 -1 N GLU A 261 O ARG A 291 SHEET 3 AA3 3 MET A 318 GLY A 319 1 O GLY A 319 N GLU A 260 LINK O ASP A 254 CA CA A 402 1555 1555 2.72 LINK O MET A 255 CA CA A 402 1555 1555 2.99 LINK O GLY A 257 CA CA A 402 1555 1555 2.37 LINK O VAL A 259 CA CA A 402 1555 1555 2.53 LINK OE2 GLU A 261 CA CA A 402 1555 1555 3.11 LINK CA CA A 402 O HOH A 661 1555 1555 2.56 CISPEP 1 CYS A 121 PRO A 122 0 0.23 CISPEP 2 TRP A 174 SER A 175 0 -22.72 CRYST1 135.978 135.978 135.978 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007354 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007354 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007354 0.00000