HEADER TRANSCRIPTION 05-NOV-21 7SQB TITLE PPAR GAMMA LBD BOUND TO INVERSE AGONIST SR10221 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PPAR-GAMMA,NUCLEAR RECEPTOR SUBFAMILY 1 GROUP C MEMBER 3; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PPARG, NR1C3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INVERSE AGONIST, NUCLEAR RECEPTOR, LIGAND BINDING DOMAIN, HELIX 12, KEYWDS 2 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR R.L.FRKIC,J.L.PEDERICK,J.B.BRUNING REVDAT 4 25-OCT-23 7SQB 1 REMARK REVDAT 3 31-MAY-23 7SQB 1 JRNL REVDAT 2 17-MAY-23 7SQB 1 JRNL REVDAT 1 10-MAY-23 7SQB 0 JRNL AUTH R.L.FRKIC,J.L.PEDERICK,A.J.HORSFALL,B.JOVCEVSKI,E.E.CRAME, JRNL AUTH 2 W.KOWALCZYK,T.L.PUKALA,M.R.CHANG,J.ZHENG,A.L.BLAYO, JRNL AUTH 3 A.D.ABELL,T.M.KAMENECKA,J.S.HARBORT,J.R.HARMER,P.R.GRIFFIN, JRNL AUTH 4 J.B.BRUNING JRNL TITL PPAR GAMMA COREPRESSION INVOLVES ALTERNATE LIGAND JRNL TITL 2 CONFORMATION AND INFLATION OF H12 ENSEMBLES. JRNL REF ACS CHEM.BIOL. V. 18 1115 2023 JRNL REFN ESSN 1554-8937 JRNL PMID 37146157 JRNL DOI 10.1021/ACSCHEMBIO.2C00917 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 15302 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.261 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 753 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.3000 - 4.4453 1.00 3163 183 0.1867 0.2212 REMARK 3 2 4.4453 - 3.5287 1.00 2964 153 0.2217 0.2628 REMARK 3 3 3.5287 - 3.0827 1.00 2874 136 0.2937 0.3468 REMARK 3 4 3.0827 - 2.8009 1.00 2861 140 0.3447 0.4095 REMARK 3 5 2.8009 - 2.6002 0.96 2687 141 0.3943 0.4422 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.480 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 38.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 116.1 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 201 THROUGH 251 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.0222 -26.9722 6.5945 REMARK 3 T TENSOR REMARK 3 T11: 0.5866 T22: 0.7639 REMARK 3 T33: 0.8100 T12: 0.2104 REMARK 3 T13: -0.0804 T23: -0.1711 REMARK 3 L TENSOR REMARK 3 L11: 4.5501 L22: 3.7488 REMARK 3 L33: 4.4514 L12: 2.9703 REMARK 3 L13: -2.2855 L23: -0.0386 REMARK 3 S TENSOR REMARK 3 S11: -0.0709 S12: -0.2967 S13: 0.0024 REMARK 3 S21: -0.1137 S22: 0.2284 S23: -0.1393 REMARK 3 S31: 0.1913 S32: 0.1364 S33: -0.1419 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 252 THROUGH 272 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2487 -32.6538 27.5605 REMARK 3 T TENSOR REMARK 3 T11: 1.3988 T22: 1.6544 REMARK 3 T33: 0.9718 T12: -0.0729 REMARK 3 T13: -0.0342 T23: 0.0583 REMARK 3 L TENSOR REMARK 3 L11: 6.9984 L22: 9.4365 REMARK 3 L33: 5.6136 L12: -3.3696 REMARK 3 L13: 0.2321 L23: 3.7669 REMARK 3 S TENSOR REMARK 3 S11: -0.9506 S12: -0.8810 S13: -0.0562 REMARK 3 S21: 2.2616 S22: 1.1281 S23: 0.3433 REMARK 3 S31: 1.0936 S32: -0.9346 S33: -0.1467 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 273 THROUGH 333 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.3064 -15.9353 18.3542 REMARK 3 T TENSOR REMARK 3 T11: 0.5901 T22: 0.8234 REMARK 3 T33: 0.6320 T12: 0.1181 REMARK 3 T13: -0.0605 T23: -0.2548 REMARK 3 L TENSOR REMARK 3 L11: 9.2880 L22: 5.1529 REMARK 3 L33: 4.9426 L12: 2.5034 REMARK 3 L13: 0.5340 L23: 1.6601 REMARK 3 S TENSOR REMARK 3 S11: 0.4189 S12: -0.9994 S13: 0.1516 REMARK 3 S21: 0.3969 S22: -0.3782 S23: -0.1042 REMARK 3 S31: -0.5277 S32: -0.4970 S33: -0.1191 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 334 THROUGH 377 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7536 -24.9557 9.9480 REMARK 3 T TENSOR REMARK 3 T11: 0.5531 T22: 1.0587 REMARK 3 T33: 0.8254 T12: 0.1179 REMARK 3 T13: -0.1587 T23: -0.3482 REMARK 3 L TENSOR REMARK 3 L11: 7.0044 L22: 4.9458 REMARK 3 L33: 6.7543 L12: 5.4151 REMARK 3 L13: -3.7461 L23: -2.8656 REMARK 3 S TENSOR REMARK 3 S11: 0.1185 S12: 0.2633 S13: 1.3347 REMARK 3 S21: -0.5702 S22: 0.1819 S23: 0.2064 REMARK 3 S31: -0.0347 S32: -1.1103 S33: -0.2691 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 378 THROUGH 430 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.2434 -11.9916 2.7251 REMARK 3 T TENSOR REMARK 3 T11: 0.6865 T22: 0.8624 REMARK 3 T33: 0.6936 T12: 0.2057 REMARK 3 T13: -0.0011 T23: -0.0647 REMARK 3 L TENSOR REMARK 3 L11: 4.0618 L22: 8.8686 REMARK 3 L33: 6.9277 L12: 0.5615 REMARK 3 L13: -1.0051 L23: 3.4357 REMARK 3 S TENSOR REMARK 3 S11: 0.3565 S12: 0.4390 S13: 0.1197 REMARK 3 S21: -0.3737 S22: -0.2227 S23: -0.3655 REMARK 3 S31: -0.5280 S32: -0.3630 S33: -0.0650 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 431 THROUGH 459 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4901 -10.3314 8.5016 REMARK 3 T TENSOR REMARK 3 T11: 1.1127 T22: 1.2654 REMARK 3 T33: 1.1240 T12: 0.0947 REMARK 3 T13: -0.0653 T23: -0.2384 REMARK 3 L TENSOR REMARK 3 L11: 8.6302 L22: 2.6872 REMARK 3 L33: 3.7371 L12: -2.1987 REMARK 3 L13: -5.3457 L23: 2.1541 REMARK 3 S TENSOR REMARK 3 S11: 0.8222 S12: 0.1195 S13: 0.5906 REMARK 3 S21: -0.2091 S22: -0.3666 S23: 0.3790 REMARK 3 S31: -0.7329 S32: -0.6760 S33: -0.3739 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 460 THROUGH 477 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.2837 -19.3166 32.3111 REMARK 3 T TENSOR REMARK 3 T11: 1.1375 T22: 1.1821 REMARK 3 T33: 0.8228 T12: -0.0208 REMARK 3 T13: -0.2582 T23: -0.1172 REMARK 3 L TENSOR REMARK 3 L11: 5.2855 L22: 4.7899 REMARK 3 L33: 3.7379 L12: 1.0038 REMARK 3 L13: 4.1210 L23: -0.7815 REMARK 3 S TENSOR REMARK 3 S11: 0.4297 S12: -0.4056 S13: 0.0777 REMARK 3 S21: 0.5037 S22: -0.5059 S23: 0.2706 REMARK 3 S31: -0.8217 S32: 0.3072 S33: 0.1167 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7SQB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-NOV-21. REMARK 100 THE DEPOSITION ID IS D_1000260442. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-OCT-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15565 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 48.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 36.80 REMARK 200 R MERGE (I) : 0.20700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 38.20 REMARK 200 R MERGE FOR SHELL (I) : 9.90000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6C5Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4.25M AMMONIUM ACETATE, 0.1M BIS TRIS REMARK 280 PROPANE PH 6.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 242.22067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 121.11033 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 181.66550 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 60.55517 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 302.77583 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 242.22067 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 121.11033 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 60.55517 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 181.66550 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 302.77583 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 612 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 188 REMARK 465 ALA A 189 REMARK 465 HIS A 190 REMARK 465 HIS A 191 REMARK 465 HIS A 192 REMARK 465 HIS A 193 REMARK 465 HIS A 194 REMARK 465 HIS A 195 REMARK 465 VAL A 196 REMARK 465 ASP A 197 REMARK 465 ASP A 198 REMARK 465 ASP A 199 REMARK 465 ASP A 200 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 242 OG1 CG2 REMARK 470 LYS A 261 CG CD CE NZ REMARK 470 LYS A 263 CD CE NZ REMARK 470 LYS A 265 CD CE NZ REMARK 470 ILE A 267 CG1 CG2 CD1 REMARK 470 THR A 268 OG1 CG2 REMARK 470 GLN A 271 CG CD OE1 NE2 REMARK 470 SER A 274 OG REMARK 470 LYS A 275 CG CD CE NZ REMARK 470 THR A 461 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 202 84.90 53.09 REMARK 500 HIS A 266 92.58 59.76 REMARK 500 GLU A 272 99.33 -69.05 REMARK 500 ASN A 335 -147.24 -129.43 REMARK 500 LEU A 356 -175.11 -69.89 REMARK 500 ASP A 362 32.87 -142.62 REMARK 500 LEU A 393 36.87 -85.36 REMARK 500 LEU A 401 -82.99 -73.61 REMARK 500 GLN A 430 16.75 59.32 REMARK 500 THR A 461 -30.72 66.35 REMARK 500 SER A 464 91.48 -62.65 REMARK 500 LEU A 476 -75.03 -76.27 REMARK 500 REMARK 500 REMARK: NULL DBREF 7SQB A 203 477 UNP P37231 PPARG_HUMAN 231 505 SEQADV 7SQB MET A 188 UNP P37231 INITIATING METHIONINE SEQADV 7SQB ALA A 189 UNP P37231 EXPRESSION TAG SEQADV 7SQB HIS A 190 UNP P37231 EXPRESSION TAG SEQADV 7SQB HIS A 191 UNP P37231 EXPRESSION TAG SEQADV 7SQB HIS A 192 UNP P37231 EXPRESSION TAG SEQADV 7SQB HIS A 193 UNP P37231 EXPRESSION TAG SEQADV 7SQB HIS A 194 UNP P37231 EXPRESSION TAG SEQADV 7SQB HIS A 195 UNP P37231 EXPRESSION TAG SEQADV 7SQB VAL A 196 UNP P37231 EXPRESSION TAG SEQADV 7SQB ASP A 197 UNP P37231 EXPRESSION TAG SEQADV 7SQB ASP A 198 UNP P37231 EXPRESSION TAG SEQADV 7SQB ASP A 199 UNP P37231 EXPRESSION TAG SEQADV 7SQB ASP A 200 UNP P37231 EXPRESSION TAG SEQADV 7SQB LYS A 201 UNP P37231 EXPRESSION TAG SEQADV 7SQB MET A 202 UNP P37231 EXPRESSION TAG SEQRES 1 A 290 MET ALA HIS HIS HIS HIS HIS HIS VAL ASP ASP ASP ASP SEQRES 2 A 290 LYS MET GLN LEU ASN PRO GLU SER ALA ASP LEU ARG ALA SEQRES 3 A 290 LEU ALA LYS HIS LEU TYR ASP SER TYR ILE LYS SER PHE SEQRES 4 A 290 PRO LEU THR LYS ALA LYS ALA ARG ALA ILE LEU THR GLY SEQRES 5 A 290 LYS THR THR ASP LYS SER PRO PHE VAL ILE TYR ASP MET SEQRES 6 A 290 ASN SER LEU MET MET GLY GLU ASP LYS ILE LYS PHE LYS SEQRES 7 A 290 HIS ILE THR PRO LEU GLN GLU GLN SER LYS GLU VAL ALA SEQRES 8 A 290 ILE ARG ILE PHE GLN GLY CYS GLN PHE ARG SER VAL GLU SEQRES 9 A 290 ALA VAL GLN GLU ILE THR GLU TYR ALA LYS SER ILE PRO SEQRES 10 A 290 GLY PHE VAL ASN LEU ASP LEU ASN ASP GLN VAL THR LEU SEQRES 11 A 290 LEU LYS TYR GLY VAL HIS GLU ILE ILE TYR THR MET LEU SEQRES 12 A 290 ALA SER LEU MET ASN LYS ASP GLY VAL LEU ILE SER GLU SEQRES 13 A 290 GLY GLN GLY PHE MET THR ARG GLU PHE LEU LYS SER LEU SEQRES 14 A 290 ARG LYS PRO PHE GLY ASP PHE MET GLU PRO LYS PHE GLU SEQRES 15 A 290 PHE ALA VAL LYS PHE ASN ALA LEU GLU LEU ASP ASP SER SEQRES 16 A 290 ASP LEU ALA ILE PHE ILE ALA VAL ILE ILE LEU SER GLY SEQRES 17 A 290 ASP ARG PRO GLY LEU LEU ASN VAL LYS PRO ILE GLU ASP SEQRES 18 A 290 ILE GLN ASP ASN LEU LEU GLN ALA LEU GLU LEU GLN LEU SEQRES 19 A 290 LYS LEU ASN HIS PRO GLU SER SER GLN LEU PHE ALA LYS SEQRES 20 A 290 LEU LEU GLN LYS MET THR ASP LEU ARG GLN ILE VAL THR SEQRES 21 A 290 GLU HIS VAL GLN LEU LEU GLN VAL ILE LYS LYS THR GLU SEQRES 22 A 290 THR ASP MET SER LEU HIS PRO LEU LEU GLN GLU ILE TYR SEQRES 23 A 290 LYS ASP LEU TYR HET A8R A 501 40 HET A8R A 502 40 HETNAM A8R (2S)-2-{5-[(5-{[(1S)-1-(4-TERT-BUTYLPHENYL) HETNAM 2 A8R ETHYL]CARBAMOYL}-2,3-DIMETHYL-1H-INDOL-1-YL)METHYL]-2- HETNAM 3 A8R CHLOROPHENOXY}PROPANOIC ACID FORMUL 2 A8R 2(C33 H37 CL N2 O4) FORMUL 4 HOH *17(H2 O) HELIX 1 AA1 ASN A 205 PHE A 226 1 22 HELIX 2 AA2 THR A 229 THR A 238 1 10 HELIX 3 AA3 ASP A 251 ASP A 260 1 10 HELIX 4 AA4 GLU A 272 ILE A 303 1 32 HELIX 5 AA5 ASP A 310 MET A 334 1 25 HELIX 6 AA6 ARG A 350 LYS A 354 1 5 HELIX 7 AA7 SER A 355 LEU A 356 5 2 HELIX 8 AA8 ARG A 357 GLY A 361 5 5 HELIX 9 AA9 MET A 364 ASN A 375 1 12 HELIX 10 AB1 ALA A 376 GLU A 378 5 3 HELIX 11 AB2 ASP A 380 LEU A 393 1 14 HELIX 12 AB3 VAL A 403 HIS A 425 1 23 HELIX 13 AB4 GLN A 430 GLU A 460 1 31 HELIX 14 AB5 HIS A 466 TYR A 477 1 12 SHEET 1 AA1 3 PHE A 247 ILE A 249 0 SHEET 2 AA1 3 GLY A 346 THR A 349 1 O PHE A 347 N ILE A 249 SHEET 3 AA1 3 GLY A 338 ILE A 341 -1 N ILE A 341 O GLY A 346 CRYST1 65.854 65.854 363.331 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015185 0.008767 0.000000 0.00000 SCALE2 0.000000 0.017534 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002752 0.00000