HEADER BIOSYNTHETIC PROTEIN 16-NOV-21 7SU6 TITLE DIHYDRONEOPTERIN ALDOLASE (DHNA) LYS98ALA FROM YERSINIA PESTIS CO- TITLE 2 CRYSTALLIZED WITH 7,8-DIHYDRONEOPTERIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: 7,8-DIHYDRONEOPTERIN ALDOLASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 4.1.2.25; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA PESTIS; SOURCE 3 ORGANISM_TAXID: 632; SOURCE 4 GENE: Y3531; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS FOLB FOLATE PATHWAY, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.R.BOURNE REVDAT 2 25-OCT-23 7SU6 1 REMARK REVDAT 1 28-DEC-22 7SU6 0 JRNL AUTH C.R.BOURNE,A.TAN JRNL TITL DIHYDRONEOPTERIN ALDOLASE (DHNA) LYS98ALA FROM YERSINIA JRNL TITL 2 PESTIS CO-CRYSTALLIZED WITH 7,8-DIHYDRONEOPTERIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.17 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 29519 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.244 REMARK 3 R VALUE (WORKING SET) : 0.241 REMARK 3 FREE R VALUE : 0.292 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.620 REMARK 3 FREE R VALUE TEST SET COUNT : 1954 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.2300 - 5.1900 0.99 2175 151 0.2314 0.2773 REMARK 3 2 5.1800 - 4.1200 0.99 2045 146 0.1807 0.2152 REMARK 3 3 4.1200 - 3.6000 0.98 2009 142 0.1914 0.2506 REMARK 3 4 3.6000 - 3.2700 0.96 1963 142 0.2234 0.2654 REMARK 3 5 3.2700 - 3.0300 0.97 1986 138 0.2476 0.3077 REMARK 3 6 3.0300 - 2.8500 1.00 1991 141 0.2522 0.3236 REMARK 3 7 2.8500 - 2.7100 1.00 2018 143 0.2564 0.3240 REMARK 3 8 2.7100 - 2.5900 0.99 2002 142 0.2627 0.3064 REMARK 3 9 2.5900 - 2.4900 0.99 1983 139 0.2651 0.2886 REMARK 3 10 2.4900 - 2.4100 0.99 1970 140 0.2888 0.3097 REMARK 3 11 2.4100 - 2.3300 0.99 1995 142 0.2830 0.3573 REMARK 3 12 2.3300 - 2.2700 0.97 1907 136 0.3392 0.4171 REMARK 3 13 2.2700 - 2.2100 0.84 1677 119 0.4090 0.4832 REMARK 3 14 2.2100 - 2.1500 0.93 1844 133 0.3371 0.3862 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.080 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 3686 REMARK 3 ANGLE : 0.541 5004 REMARK 3 CHIRALITY : 0.048 584 REMARK 3 PLANARITY : 0.002 640 REMARK 3 DIHEDRAL : 20.863 1336 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7SU6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-NOV-21. REMARK 100 THE DEPOSITION ID IS D_1000259572. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JAN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2 - 6.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 200K REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30248 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.19 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : 0.66900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6OJO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.05 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05 - 0.1M BISTRIS, 0.1-0.2 M CACL2, REMARK 280 0 - 0.1M NACL, 43 - 49% MPD, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.62400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.27450 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.62400 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 48.27450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 24070 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -186.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 79.24800 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 353 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 359 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 365 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 377 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -23 REMARK 465 HIS A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 SER A -16 REMARK 465 SER A -15 REMARK 465 GLY A -14 REMARK 465 VAL A -13 REMARK 465 ASP A -12 REMARK 465 LEU A -11 REMARK 465 GLY A -10 REMARK 465 THR A -9 REMARK 465 GLU A -8 REMARK 465 ASN A -7 REMARK 465 LEU A -6 REMARK 465 TYR A -5 REMARK 465 PHE A -4 REMARK 465 GLN A -3 REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 GLY A 16 REMARK 465 VAL A 17 REMARK 465 TYR A 18 REMARK 465 ASP A 19 REMARK 465 TRP A 20 REMARK 465 GLU A 21 REMARK 465 GLN A 22 REMARK 465 ARG A 117 REMARK 465 LEU A 118 REMARK 465 SER A 119 REMARK 465 MET B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 SER B -16 REMARK 465 SER B -15 REMARK 465 GLY B -14 REMARK 465 VAL B -13 REMARK 465 ASP B -12 REMARK 465 LEU B -11 REMARK 465 GLY B -10 REMARK 465 THR B -9 REMARK 465 GLU B -8 REMARK 465 ASN B -7 REMARK 465 LEU B -6 REMARK 465 TYR B -5 REMARK 465 PHE B -4 REMARK 465 GLN B -3 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 GLY B 16 REMARK 465 VAL B 17 REMARK 465 TYR B 18 REMARK 465 ASP B 19 REMARK 465 TRP B 20 REMARK 465 GLU B 21 REMARK 465 LEU B 118 REMARK 465 SER B 119 REMARK 465 MET C -23 REMARK 465 HIS C -22 REMARK 465 HIS C -21 REMARK 465 HIS C -20 REMARK 465 HIS C -19 REMARK 465 HIS C -18 REMARK 465 HIS C -17 REMARK 465 SER C -16 REMARK 465 SER C -15 REMARK 465 GLY C -14 REMARK 465 VAL C -13 REMARK 465 ASP C -12 REMARK 465 LEU C -11 REMARK 465 GLY C -10 REMARK 465 THR C -9 REMARK 465 GLU C -8 REMARK 465 ASN C -7 REMARK 465 LEU C -6 REMARK 465 TYR C -5 REMARK 465 PHE C -4 REMARK 465 GLN C -3 REMARK 465 SER C -2 REMARK 465 ASN C -1 REMARK 465 LEU C 118 REMARK 465 SER C 119 REMARK 465 MET D -23 REMARK 465 HIS D -22 REMARK 465 HIS D -21 REMARK 465 HIS D -20 REMARK 465 HIS D -19 REMARK 465 HIS D -18 REMARK 465 HIS D -17 REMARK 465 SER D -16 REMARK 465 SER D -15 REMARK 465 GLY D -14 REMARK 465 VAL D -13 REMARK 465 ASP D -12 REMARK 465 LEU D -11 REMARK 465 GLY D -10 REMARK 465 THR D -9 REMARK 465 GLU D -8 REMARK 465 ASN D -7 REMARK 465 LEU D -6 REMARK 465 TYR D -5 REMARK 465 PHE D -4 REMARK 465 GLN D -3 REMARK 465 SER D -2 REMARK 465 ASN D -1 REMARK 465 ALA D 0 REMARK 465 ARG D 117 REMARK 465 LEU D 118 REMARK 465 SER D 119 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 26 CG CD OE1 REMARK 470 LYS A 40 CG CD CE NZ REMARK 470 ARG A 68 CD NE CZ NH1 NH2 REMARK 470 GLN B 22 CG CD OE1 NE2 REMARK 470 ARG B 117 CG CD NE CZ NH1 NH2 REMARK 470 TRP C 20 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP C 20 CZ3 CH2 REMARK 470 GLU C 21 CB CG CD OE1 OE2 REMARK 470 ARG C 117 CG CD NE CZ NH1 NH2 REMARK 470 TRP D 20 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP D 20 CZ3 CH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR D 53 C17 NPR D 200 1.46 REMARK 500 OH TYR B 53 O18 NPR B 201 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 24 127.09 66.17 REMARK 500 ASN A 88 41.07 -96.35 REMARK 500 ILE B 24 117.53 63.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 367 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH A 368 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH B 380 DISTANCE = 6.19 ANGSTROMS REMARK 525 HOH B 381 DISTANCE = 6.19 ANGSTROMS REMARK 525 HOH C 366 DISTANCE = 9.22 ANGSTROMS REMARK 525 HOH D 378 DISTANCE = 6.92 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6OJO RELATED DB: PDB REMARK 900 WILD TYPE DHNA WITH DIFFERENT SMALL MOLECULE DBREF 7SU6 A 1 119 UNP Q8CZR7 Q8CZR7_YERPE 2 120 DBREF 7SU6 B 1 119 UNP Q8CZR7 Q8CZR7_YERPE 2 120 DBREF 7SU6 C 1 119 UNP Q8CZR7 Q8CZR7_YERPE 2 120 DBREF 7SU6 D 1 119 UNP Q8CZR7 Q8CZR7_YERPE 2 120 SEQADV 7SU6 MET A -23 UNP Q8CZR7 INITIATING METHIONINE SEQADV 7SU6 HIS A -22 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS A -21 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS A -20 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS A -19 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS A -18 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS A -17 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 SER A -16 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 SER A -15 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 GLY A -14 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 VAL A -13 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ASP A -12 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 LEU A -11 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 GLY A -10 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 THR A -9 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 GLU A -8 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ASN A -7 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 LEU A -6 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 TYR A -5 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 PHE A -4 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 GLN A -3 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 SER A -2 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ASN A -1 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ALA A 0 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ALA A 98 UNP Q8CZR7 LYS 99 ENGINEERED MUTATION SEQADV 7SU6 MET B -23 UNP Q8CZR7 INITIATING METHIONINE SEQADV 7SU6 HIS B -22 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS B -21 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS B -20 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS B -19 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS B -18 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS B -17 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 SER B -16 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 SER B -15 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 GLY B -14 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 VAL B -13 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ASP B -12 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 LEU B -11 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 GLY B -10 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 THR B -9 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 GLU B -8 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ASN B -7 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 LEU B -6 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 TYR B -5 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 PHE B -4 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 GLN B -3 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 SER B -2 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ASN B -1 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ALA B 0 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ALA B 98 UNP Q8CZR7 LYS 99 ENGINEERED MUTATION SEQADV 7SU6 MET C -23 UNP Q8CZR7 INITIATING METHIONINE SEQADV 7SU6 HIS C -22 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS C -21 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS C -20 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS C -19 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS C -18 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS C -17 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 SER C -16 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 SER C -15 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 GLY C -14 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 VAL C -13 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ASP C -12 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 LEU C -11 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 GLY C -10 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 THR C -9 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 GLU C -8 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ASN C -7 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 LEU C -6 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 TYR C -5 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 PHE C -4 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 GLN C -3 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 SER C -2 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ASN C -1 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ALA C 0 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ALA C 98 UNP Q8CZR7 LYS 99 ENGINEERED MUTATION SEQADV 7SU6 MET D -23 UNP Q8CZR7 INITIATING METHIONINE SEQADV 7SU6 HIS D -22 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS D -21 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS D -20 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS D -19 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS D -18 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 HIS D -17 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 SER D -16 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 SER D -15 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 GLY D -14 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 VAL D -13 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ASP D -12 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 LEU D -11 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 GLY D -10 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 THR D -9 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 GLU D -8 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ASN D -7 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 LEU D -6 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 TYR D -5 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 PHE D -4 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 GLN D -3 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 SER D -2 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ASN D -1 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ALA D 0 UNP Q8CZR7 EXPRESSION TAG SEQADV 7SU6 ALA D 98 UNP Q8CZR7 LYS 99 ENGINEERED MUTATION SEQRES 1 A 143 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 143 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET ASP SEQRES 3 A 143 ILE VAL PHE ILE GLU GLU LEU SER VAL ILE THR THR ILE SEQRES 4 A 143 GLY VAL TYR ASP TRP GLU GLN THR ILE GLN GLN LYS LEU SEQRES 5 A 143 VAL PHE ASP ILE GLU MET GLY TRP ASP ASN ARG LYS ALA SEQRES 6 A 143 ALA GLY SER ASP ASP VAL ASN ASP CYS LEU SER TYR ALA SEQRES 7 A 143 ASP ILE SER GLU ALA VAL ILE GLN HIS VAL GLY SER GLN SEQRES 8 A 143 ARG PHE ALA LEU VAL GLU ARG VAL ALA GLU GLU VAL ALA SEQRES 9 A 143 GLU LEU LEU LEU ARG ARG PHE ASN SER PRO TRP VAL ARG SEQRES 10 A 143 ILE LYS VAL SER ALA PRO GLY ALA VAL ALA GLN ALA LYS SEQRES 11 A 143 ASN VAL GLY VAL ILE ILE GLU ARG GLY GLN ARG LEU SER SEQRES 1 B 143 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 143 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET ASP SEQRES 3 B 143 ILE VAL PHE ILE GLU GLU LEU SER VAL ILE THR THR ILE SEQRES 4 B 143 GLY VAL TYR ASP TRP GLU GLN THR ILE GLN GLN LYS LEU SEQRES 5 B 143 VAL PHE ASP ILE GLU MET GLY TRP ASP ASN ARG LYS ALA SEQRES 6 B 143 ALA GLY SER ASP ASP VAL ASN ASP CYS LEU SER TYR ALA SEQRES 7 B 143 ASP ILE SER GLU ALA VAL ILE GLN HIS VAL GLY SER GLN SEQRES 8 B 143 ARG PHE ALA LEU VAL GLU ARG VAL ALA GLU GLU VAL ALA SEQRES 9 B 143 GLU LEU LEU LEU ARG ARG PHE ASN SER PRO TRP VAL ARG SEQRES 10 B 143 ILE LYS VAL SER ALA PRO GLY ALA VAL ALA GLN ALA LYS SEQRES 11 B 143 ASN VAL GLY VAL ILE ILE GLU ARG GLY GLN ARG LEU SER SEQRES 1 C 143 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 C 143 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET ASP SEQRES 3 C 143 ILE VAL PHE ILE GLU GLU LEU SER VAL ILE THR THR ILE SEQRES 4 C 143 GLY VAL TYR ASP TRP GLU GLN THR ILE GLN GLN LYS LEU SEQRES 5 C 143 VAL PHE ASP ILE GLU MET GLY TRP ASP ASN ARG LYS ALA SEQRES 6 C 143 ALA GLY SER ASP ASP VAL ASN ASP CYS LEU SER TYR ALA SEQRES 7 C 143 ASP ILE SER GLU ALA VAL ILE GLN HIS VAL GLY SER GLN SEQRES 8 C 143 ARG PHE ALA LEU VAL GLU ARG VAL ALA GLU GLU VAL ALA SEQRES 9 C 143 GLU LEU LEU LEU ARG ARG PHE ASN SER PRO TRP VAL ARG SEQRES 10 C 143 ILE LYS VAL SER ALA PRO GLY ALA VAL ALA GLN ALA LYS SEQRES 11 C 143 ASN VAL GLY VAL ILE ILE GLU ARG GLY GLN ARG LEU SER SEQRES 1 D 143 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 D 143 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA MET ASP SEQRES 3 D 143 ILE VAL PHE ILE GLU GLU LEU SER VAL ILE THR THR ILE SEQRES 4 D 143 GLY VAL TYR ASP TRP GLU GLN THR ILE GLN GLN LYS LEU SEQRES 5 D 143 VAL PHE ASP ILE GLU MET GLY TRP ASP ASN ARG LYS ALA SEQRES 6 D 143 ALA GLY SER ASP ASP VAL ASN ASP CYS LEU SER TYR ALA SEQRES 7 D 143 ASP ILE SER GLU ALA VAL ILE GLN HIS VAL GLY SER GLN SEQRES 8 D 143 ARG PHE ALA LEU VAL GLU ARG VAL ALA GLU GLU VAL ALA SEQRES 9 D 143 GLU LEU LEU LEU ARG ARG PHE ASN SER PRO TRP VAL ARG SEQRES 10 D 143 ILE LYS VAL SER ALA PRO GLY ALA VAL ALA GLN ALA LYS SEQRES 11 D 143 ASN VAL GLY VAL ILE ILE GLU ARG GLY GLN ARG LEU SER HET NPR A 201 18 HET MPD A 202 8 HET NPR B 201 18 HET MPD B 202 8 HET NPR C 200 18 HET NPR D 200 18 HETNAM NPR 2-AMINO-7,8-DIHYDRO-6-(1,2,3-TRIHYDROXYPROPYL)-4(1H)- HETNAM 2 NPR PTERIDINONE HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETSYN NPR 7,8-DIHYDRONEOPTERIN FORMUL 5 NPR 4(C9 H13 N5 O4) FORMUL 6 MPD 2(C6 H14 O2) FORMUL 11 HOH *293(H2 O) HELIX 1 AA1 ASN A 38 ASP A 45 1 8 HELIX 2 AA2 ASP A 46 CYS A 50 5 5 HELIX 3 AA3 SER A 52 GLN A 67 1 16 HELIX 4 AA4 LEU A 71 PHE A 87 1 17 HELIX 5 AA5 ASN B 38 ASP B 45 1 8 HELIX 6 AA6 ASP B 46 CYS B 50 5 5 HELIX 7 AA7 SER B 52 GLN B 67 1 16 HELIX 8 AA8 LEU B 71 PHE B 87 1 17 HELIX 9 AA9 ASP C 19 THR C 23 5 5 HELIX 10 AB1 ASN C 38 ASP C 45 1 8 HELIX 11 AB2 ASP C 46 CYS C 50 5 5 HELIX 12 AB3 SER C 52 GLY C 65 1 14 HELIX 13 AB4 LEU C 71 ASN C 88 1 18 HELIX 14 AB5 ASP D 19 THR D 23 5 5 HELIX 15 AB6 ASN D 38 ASP D 45 1 8 HELIX 16 AB7 ASP D 46 CYS D 50 5 5 HELIX 17 AB8 SER D 52 SER D 66 1 15 HELIX 18 AB9 LEU D 71 ASN D 88 1 18 SHEET 1 AA118 ARG C 68 PHE C 69 0 SHEET 2 AA118 ASP C 2 ILE C 15 1 N THR C 14 O PHE C 69 SHEET 3 AA118 GLN C 26 TRP C 36 -1 O LEU C 28 N VAL C 11 SHEET 4 AA118 TRP C 91 SER C 97 -1 O SER C 97 N VAL C 29 SHEET 5 AA118 ALA C 105 GLY C 115 -1 O ARG C 114 N VAL C 92 SHEET 6 AA118 ASP A 2 THR A 14 -1 N GLU A 7 O ASN C 107 SHEET 7 AA118 GLN A 25 TRP A 36 -1 O LEU A 28 N VAL A 11 SHEET 8 AA118 TRP A 91 SER A 97 -1 O ARG A 93 N GLU A 33 SHEET 9 AA118 ALA A 105 GLY A 115 -1 O ARG A 114 N VAL A 92 SHEET 10 AA118 ASP D 2 THR D 13 -1 O GLU D 7 N ASN A 107 SHEET 11 AA118 GLN D 26 TRP D 36 -1 O GLN D 26 N THR D 13 SHEET 12 AA118 TRP D 91 SER D 97 -1 O SER D 97 N VAL D 29 SHEET 13 AA118 ALA D 105 GLY D 115 -1 O ARG D 114 N VAL D 92 SHEET 14 AA118 ASP B 2 THR B 14 -1 N GLU B 7 O ASN D 107 SHEET 15 AA118 GLN B 25 TRP B 36 -1 O GLN B 26 N THR B 13 SHEET 16 AA118 TRP B 91 SER B 97 -1 O ARG B 93 N GLU B 33 SHEET 17 AA118 ALA B 105 GLY B 115 -1 O ARG B 114 N VAL B 92 SHEET 18 AA118 ASP C 2 ILE C 15 -1 O GLU C 7 N ASN B 107 CRYST1 71.426 79.248 96.549 90.00 90.00 90.00 P 2 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014001 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012619 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010357 0.00000