data_7SXP # _entry.id 7SXP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.373 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7SXP pdb_00007sxp 10.2210/pdb7sxp/pdb WWPDB D_1000261103 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7SXP _pdbx_database_status.recvd_initial_deposition_date 2021-11-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Banco, M.T.' 1 ? ;Ferre-D'Amare, A.R. ; 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Chem Biol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2451-9456 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 30 _citation.language ? _citation.page_first 643 _citation.page_last 657.e8 _citation.title ;Investigating the NRAS 5' UTR as a target for small molecules. ; _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.chembiol.2023.05.004 _citation.pdbx_database_id_PubMed 37257453 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Balaratnam, S.' 1 ? primary 'Torrey, Z.R.' 2 ? primary 'Calabrese, D.R.' 3 ? primary 'Banco, M.T.' 4 ? primary 'Yazdani, K.' 5 ? primary 'Liang, X.' 6 ? primary 'Fullenkamp, C.R.' 7 ? primary 'Seshadri, S.' 8 ? primary 'Holewinski, R.J.' 9 ? primary 'Andresson, T.' 10 ? primary ;Ferre-D'Amare, A.R. ; 11 ? primary 'Incarnato, D.' 12 ? primary 'Schneekloth Jr., J.S.' 13 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 7SXP _cell.details ? _cell.formula_units_Z ? _cell.length_a 36.402 _cell.length_a_esd ? _cell.length_b 36.402 _cell.length_b_esd ? _cell.length_c 70.103 _cell.length_c_esd ? _cell.volume 80448.458 _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 7SXP _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ;P 31 2" ; _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'NRAS mRNA' 7242.323 1 ? ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 3 ? ? ? ? 3 non-polymer syn 'CACODYLIC ACID' 137.997 2 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code UGUGGGAUGGGCGGGUCUGGGA _entity_poly.pdbx_seq_one_letter_code_can UGUGGGAUGGGCGGGUCUGGGA _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 U n 1 2 G n 1 3 U n 1 4 G n 1 5 G n 1 6 G n 1 7 A n 1 8 U n 1 9 G n 1 10 G n 1 11 G n 1 12 C n 1 13 G n 1 14 G n 1 15 G n 1 16 U n 1 17 C n 1 18 U n 1 19 G n 1 20 G n 1 21 G n 1 22 A n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 22 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name Human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7SXP _struct_ref.pdbx_db_accession 7SXP _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7SXP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 22 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 7SXP _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 22 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 22 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CAD non-polymer . 'CACODYLIC ACID' 'HYDROXYDIMETHYLARSINE OXIDE' 'C2 H7 As O2' 137.997 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7SXP _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.85 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 33.56 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '20 - 25 % PEG 3350, 80 mM sodium chloride and 100 mM BIS-TRIS pH 6.5' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-09-25 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.104 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.104 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 88.13 _reflns.entry_id 7SXP _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.3 _reflns.d_resolution_low 31.53 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 2556 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 17.4 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 5.3 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.058 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.996 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.32 _reflns_shell.d_res_low 2.42 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 305 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.678 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.468 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 83.24 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7SXP _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.90 _refine.ls_d_res_low 31.53 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 1331 _refine.ls_number_reflns_R_free 61 _refine.ls_number_reflns_R_work 1270 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.37 _refine.ls_percent_reflns_R_free 4.58 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2421 _refine.ls_R_factor_R_free 0.2772 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2408 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.7152 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1496 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.90 _refine_hist.d_res_low 31.53 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 425 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 412 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0031 ? 468 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.6193 ? 732 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0459 ? 96 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0065 ? 17 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 19.3227 ? 223 ? f_dihedral_angle_d ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.90 _refine_ls_shell.d_res_low 31.53 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 61 _refine_ls_shell.number_reflns_R_work 1270 _refine_ls_shell.percent_reflns_obs 98.37 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2408 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.2772 # _struct.entry_id 7SXP _struct.title 'G-quadruplex structure formed in the NRAS mRNA with a G8U substitution' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7SXP _struct_keywords.text 'G-quadruplex, NRAS, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 4 O6 ? ? ? 1_555 B K . K ? ? A G 4 A K 101 1_555 ? ? ? ? ? ? ? 3.097 ? ? metalc2 metalc ? ? A G 4 O6 ? ? ? 1_555 B K . K ? ? A G 4 A K 101 4_555 ? ? ? ? ? ? ? 3.097 ? ? metalc3 metalc ? ? A G 4 O6 ? ? ? 1_555 C K . K ? ? A G 4 A K 102 1_555 ? ? ? ? ? ? ? 2.646 ? ? metalc4 metalc ? ? A G 5 O6 ? ? ? 1_555 C K . K ? ? A G 5 A K 102 1_555 ? ? ? ? ? ? ? 2.736 ? ? metalc5 metalc ? ? A G 5 O6 ? ? ? 1_555 D K . K ? ? A G 5 A K 103 1_555 ? ? ? ? ? ? ? 2.839 ? ? metalc6 metalc ? ? A G 6 O6 ? ? ? 1_555 D K . K ? ? A G 6 A K 103 1_555 ? ? ? ? ? ? ? 2.712 ? ? metalc7 metalc ? ? A G 9 O6 ? ? ? 1_555 B K . K ? ? A G 9 A K 101 1_555 ? ? ? ? ? ? ? 2.723 ? ? metalc8 metalc ? ? A G 9 O6 ? ? ? 1_555 B K . K ? ? A G 9 A K 101 4_555 ? ? ? ? ? ? ? 2.723 ? ? metalc9 metalc ? ? A G 9 O6 ? ? ? 1_555 C K . K ? ? A G 9 A K 102 1_555 ? ? ? ? ? ? ? 2.707 ? ? metalc10 metalc ? ? A G 10 O6 ? ? ? 1_555 C K . K ? ? A G 10 A K 102 1_555 ? ? ? ? ? ? ? 2.784 ? ? metalc11 metalc ? ? A G 10 O6 ? ? ? 1_555 D K . K ? ? A G 10 A K 103 1_555 ? ? ? ? ? ? ? 2.690 ? ? metalc12 metalc ? ? A G 11 O6 ? ? ? 1_555 D K . K ? ? A G 11 A K 103 1_555 ? ? ? ? ? ? ? 2.732 ? ? metalc13 metalc ? ? A G 13 O6 ? ? ? 1_555 B K . K ? ? A G 13 A K 101 1_555 ? ? ? ? ? ? ? 2.569 ? ? metalc14 metalc ? ? A G 13 O6 ? ? ? 1_555 B K . K ? ? A G 13 A K 101 4_555 ? ? ? ? ? ? ? 2.569 ? ? metalc15 metalc ? ? A G 13 O6 ? ? ? 1_555 C K . K ? ? A G 13 A K 102 1_555 ? ? ? ? ? ? ? 2.737 ? ? metalc16 metalc ? ? A G 14 O6 ? ? ? 1_555 C K . K ? ? A G 14 A K 102 1_555 ? ? ? ? ? ? ? 2.752 ? ? metalc17 metalc ? ? A G 14 O6 ? ? ? 1_555 D K . K ? ? A G 14 A K 103 1_555 ? ? ? ? ? ? ? 2.939 ? ? metalc18 metalc ? ? A G 15 O6 ? ? ? 1_555 D K . K ? ? A G 15 A K 103 1_555 ? ? ? ? ? ? ? 2.715 ? ? metalc19 metalc ? ? A G 19 O6 ? ? ? 1_555 B K . K ? ? A G 19 A K 101 1_555 ? ? ? ? ? ? ? 2.746 ? ? metalc20 metalc ? ? A G 19 O6 ? ? ? 1_555 B K . K ? ? A G 19 A K 101 4_555 ? ? ? ? ? ? ? 2.746 ? ? metalc21 metalc ? ? A G 19 O6 ? ? ? 1_555 C K . K ? ? A G 19 A K 102 1_555 ? ? ? ? ? ? ? 2.767 ? ? metalc22 metalc ? ? A G 20 O6 ? ? ? 1_555 C K . K ? ? A G 20 A K 102 1_555 ? ? ? ? ? ? ? 2.701 ? ? metalc23 metalc ? ? A G 20 O6 ? ? ? 1_555 D K . K ? ? A G 20 A K 103 1_555 ? ? ? ? ? ? ? 3.177 ? ? metalc24 metalc ? ? A G 21 O6 ? ? ? 1_555 D K . K ? ? A G 21 A K 103 1_555 ? ? ? ? ? ? ? 2.619 ? ? hydrog1 hydrog ? ? A G 2 N2 ? ? ? 1_555 A A 22 N3 ? ? A G 2 A A 22 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog2 hydrog ? ? A G 4 N1 ? ? ? 1_555 A G 9 O6 ? ? A G 4 A G 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A G 4 N2 ? ? ? 1_555 A G 9 N7 ? ? A G 4 A G 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A G 4 N7 ? ? ? 1_555 A G 19 N2 ? ? A G 4 A G 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A G 4 O6 ? ? ? 1_555 A G 19 N1 ? ? A G 4 A G 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A G 5 N1 ? ? ? 1_555 A G 10 O6 ? ? A G 5 A G 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A G 5 N2 ? ? ? 1_555 A G 10 N7 ? ? A G 5 A G 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A G 5 N7 ? ? ? 1_555 A G 20 N2 ? ? A G 5 A G 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A G 5 O6 ? ? ? 1_555 A G 20 N1 ? ? A G 5 A G 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A G 5 N7 ? ? ? 1_555 A G 21 N2 ? ? A G 5 A G 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A G 5 O6 ? ? ? 1_555 A G 21 N1 ? ? A G 5 A G 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A G 6 N1 ? ? ? 1_555 A G 11 O6 ? ? A G 6 A G 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A G 6 N2 ? ? ? 1_555 A G 11 N7 ? ? A G 6 A G 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog14 hydrog ? ? A G 6 N7 ? ? ? 1_555 A G 21 N2 ? ? A G 6 A G 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A G 6 O6 ? ? ? 1_555 A G 21 N1 ? ? A G 6 A G 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A G 9 N1 ? ? ? 1_555 A G 13 O6 ? ? A G 9 A G 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A G 9 N2 ? ? ? 1_555 A G 13 N7 ? ? A G 9 A G 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A G 10 N1 ? ? ? 1_555 A G 14 O6 ? ? A G 10 A G 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A G 10 N2 ? ? ? 1_555 A G 14 N7 ? ? A G 10 A G 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A G 11 N1 ? ? ? 1_555 A G 15 O6 ? ? A G 11 A G 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A G 11 N2 ? ? ? 1_555 A G 15 N7 ? ? A G 11 A G 15 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A G 13 N1 ? ? ? 1_555 A G 19 O6 ? ? A G 13 A G 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A G 13 N2 ? ? ? 1_555 A G 19 N7 ? ? A G 13 A G 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A G 14 N1 ? ? ? 1_555 A G 20 O6 ? ? A G 14 A G 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A G 14 N2 ? ? ? 1_555 A G 20 N7 ? ? A G 14 A G 20 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? A G 15 N1 ? ? ? 1_555 A G 21 O6 ? ? A G 15 A G 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? A G 15 N2 ? ? ? 1_555 A G 21 N7 ? ? A G 15 A G 21 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _atom_sites.entry_id 7SXP _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.027471 _atom_sites.fract_transf_matrix[1][2] 0.015860 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.031721 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014265 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source AS ? ? 25.88022 7.02060 ? ? 1.67971 31.58991 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? K ? ? 16.37977 2.54835 ? ? 4.54127 84.28225 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 U 1 1 1 U U A . n A 1 2 G 2 2 2 G G A . n A 1 3 U 3 3 3 U U A . n A 1 4 G 4 4 4 G G A . n A 1 5 G 5 5 5 G G A . n A 1 6 G 6 6 6 G G A . n A 1 7 A 7 7 7 A A A . n A 1 8 U 8 8 ? ? ? A . n A 1 9 G 9 9 9 G G A . n A 1 10 G 10 10 10 G G A . n A 1 11 G 11 11 11 G G A . n A 1 12 C 12 12 12 C C A . n A 1 13 G 13 13 13 G G A . n A 1 14 G 14 14 14 G G A . n A 1 15 G 15 15 15 G G A . n A 1 16 U 16 16 16 U U A . n A 1 17 C 17 17 17 C C A . n A 1 18 U 18 18 18 U U A . n A 1 19 G 19 19 19 G G A . n A 1 20 G 20 20 20 G G A . n A 1 21 G 21 21 21 G G A . n A 1 22 A 22 22 22 A A A . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email adrian.ferre@nih.gov _pdbx_contact_author.name_first Adrian _pdbx_contact_author.name_last "Ferre-D'Amare" _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4549-1619 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K 1 101 101 K K A . C 2 K 1 102 102 K K A . D 2 K 1 103 103 K K A . E 3 CAD 1 104 104 CAD CAD A . F 3 CAD 1 105 105 CAD CAD A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id K _pdbx_struct_special_symmetry.auth_seq_id 101 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id K _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 4 ? A G 4 ? 1_555 0.0 ? 2 O6 ? A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 9 ? A G 9 ? 1_555 63.4 ? 3 O6 ? A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 9 ? A G 9 ? 1_555 63.4 ? 4 O6 ? A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 9 ? A G 9 ? 1_555 63.4 ? 5 O6 ? A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 9 ? A G 9 ? 1_555 63.4 ? 6 O6 ? A G 9 ? A G 9 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 9 ? A G 9 ? 1_555 0.0 ? 7 O6 ? A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 13 ? A G 13 ? 1_555 103.3 ? 8 O6 ? A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 13 ? A G 13 ? 1_555 103.3 ? 9 O6 ? A G 9 ? A G 9 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 13 ? A G 13 ? 1_555 79.7 ? 10 O6 ? A G 9 ? A G 9 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 13 ? A G 13 ? 1_555 79.7 ? 11 O6 ? A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 13 ? A G 13 ? 1_555 103.3 ? 12 O6 ? A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 13 ? A G 13 ? 1_555 103.3 ? 13 O6 ? A G 9 ? A G 9 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 13 ? A G 13 ? 1_555 79.7 ? 14 O6 ? A G 9 ? A G 9 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 13 ? A G 13 ? 1_555 79.7 ? 15 O6 ? A G 13 ? A G 13 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 13 ? A G 13 ? 1_555 0.0 ? 16 O6 ? A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 19 ? A G 19 ? 1_555 64.1 ? 17 O6 ? A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 19 ? A G 19 ? 1_555 64.1 ? 18 O6 ? A G 9 ? A G 9 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 19 ? A G 19 ? 1_555 106.5 ? 19 O6 ? A G 9 ? A G 9 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 19 ? A G 19 ? 1_555 106.5 ? 20 O6 ? A G 13 ? A G 13 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 19 ? A G 19 ? 1_555 66.7 ? 21 O6 ? A G 13 ? A G 13 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 19 ? A G 19 ? 1_555 66.7 ? 22 O6 ? A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 19 ? A G 19 ? 1_555 64.1 ? 23 O6 ? A G 4 ? A G 4 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 19 ? A G 19 ? 1_555 64.1 ? 24 O6 ? A G 9 ? A G 9 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 19 ? A G 19 ? 1_555 106.5 ? 25 O6 ? A G 9 ? A G 9 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 19 ? A G 19 ? 1_555 106.5 ? 26 O6 ? A G 13 ? A G 13 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 19 ? A G 19 ? 1_555 66.7 ? 27 O6 ? A G 13 ? A G 13 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 19 ? A G 19 ? 1_555 66.7 ? 28 O6 ? A G 19 ? A G 19 ? 1_555 K ? B K . ? A K 101 ? 1_555 O6 ? A G 19 ? A G 19 ? 1_555 0.0 ? 29 O6 ? A G 4 ? A G 4 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 5 ? A G 5 ? 1_555 73.5 ? 30 O6 ? A G 4 ? A G 4 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 9 ? A G 9 ? 1_555 70.1 ? 31 O6 ? A G 5 ? A G 5 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 9 ? A G 9 ? 1_555 87.2 ? 32 O6 ? A G 4 ? A G 4 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 10 ? A G 10 ? 1_555 135.6 ? 33 O6 ? A G 5 ? A G 5 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 10 ? A G 10 ? 1_555 70.7 ? 34 O6 ? A G 9 ? A G 9 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 10 ? A G 10 ? 1_555 82.7 ? 35 O6 ? A G 4 ? A G 4 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 13 ? A G 13 ? 1_555 111.7 ? 36 O6 ? A G 5 ? A G 5 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 13 ? A G 13 ? 1_555 160.0 ? 37 O6 ? A G 9 ? A G 9 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 13 ? A G 13 ? 1_555 77.1 ? 38 O6 ? A G 10 ? A G 10 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 13 ? A G 13 ? 1_555 94.8 ? 39 O6 ? A G 4 ? A G 4 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 14 ? A G 14 ? 1_555 147.2 ? 40 O6 ? A G 5 ? A G 5 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 14 ? A G 14 ? 1_555 105.3 ? 41 O6 ? A G 9 ? A G 9 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 14 ? A G 14 ? 1_555 142.5 ? 42 O6 ? A G 10 ? A G 10 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 14 ? A G 14 ? 1_555 69.0 ? 43 O6 ? A G 13 ? A G 13 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 14 ? A G 14 ? 1_555 81.0 ? 44 O6 ? A G 4 ? A G 4 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 19 ? A G 19 ? 1_555 70.2 ? 45 O6 ? A G 5 ? A G 5 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 19 ? A G 19 ? 1_555 133.4 ? 46 O6 ? A G 9 ? A G 9 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 19 ? A G 19 ? 1_555 106.4 ? 47 O6 ? A G 10 ? A G 10 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 19 ? A G 19 ? 1_555 153.4 ? 48 O6 ? A G 13 ? A G 13 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 19 ? A G 19 ? 1_555 64.2 ? 49 O6 ? A G 14 ? A G 14 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 19 ? A G 19 ? 1_555 90.6 ? 50 O6 ? A G 4 ? A G 4 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 20 ? A G 20 ? 1_555 80.7 ? 51 O6 ? A G 5 ? A G 5 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 20 ? A G 20 ? 1_555 67.5 ? 52 O6 ? A G 9 ? A G 9 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 20 ? A G 20 ? 1_555 145.9 ? 53 O6 ? A G 10 ? A G 10 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 20 ? A G 20 ? 1_555 108.0 ? 54 O6 ? A G 13 ? A G 13 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 20 ? A G 20 ? 1_555 131.8 ? 55 O6 ? A G 14 ? A G 14 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 20 ? A G 20 ? 1_555 69.2 ? 56 O6 ? A G 19 ? A G 19 ? 1_555 K ? C K . ? A K 102 ? 1_555 O6 ? A G 20 ? A G 20 ? 1_555 78.6 ? 57 O6 ? A G 5 ? A G 5 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 6 ? A G 6 ? 1_555 76.0 ? 58 O6 ? A G 5 ? A G 5 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 10 ? A G 10 ? 1_555 70.5 ? 59 O6 ? A G 6 ? A G 6 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 10 ? A G 10 ? 1_555 95.7 ? 60 O6 ? A G 5 ? A G 5 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 11 ? A G 11 ? 1_555 126.1 ? 61 O6 ? A G 6 ? A G 6 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 11 ? A G 11 ? 1_555 67.6 ? 62 O6 ? A G 10 ? A G 10 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 11 ? A G 11 ? 1_555 75.0 ? 63 O6 ? A G 5 ? A G 5 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 14 ? A G 14 ? 1_555 98.0 ? 64 O6 ? A G 6 ? A G 6 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 14 ? A G 14 ? 1_555 163.2 ? 65 O6 ? A G 10 ? A G 10 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 14 ? A G 14 ? 1_555 67.6 ? 66 O6 ? A G 11 ? A G 11 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 14 ? A G 14 ? 1_555 105.5 ? 67 O6 ? A G 5 ? A G 5 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 15 ? A G 15 ? 1_555 146.7 ? 68 O6 ? A G 6 ? A G 6 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 15 ? A G 15 ? 1_555 128.7 ? 69 O6 ? A G 10 ? A G 10 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 15 ? A G 15 ? 1_555 120.4 ? 70 O6 ? A G 11 ? A G 11 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 15 ? A G 15 ? 1_555 86.7 ? 71 O6 ? A G 14 ? A G 14 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 15 ? A G 15 ? 1_555 63.8 ? 72 O6 ? A G 5 ? A G 5 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 20 ? A G 20 ? 1_555 59.9 ? 73 O6 ? A G 6 ? A G 6 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 20 ? A G 20 ? 1_555 125.5 ? 74 O6 ? A G 10 ? A G 10 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 20 ? A G 20 ? 1_555 98.0 ? 75 O6 ? A G 11 ? A G 11 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 20 ? A G 20 ? 1_555 166.2 ? 76 O6 ? A G 14 ? A G 14 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 20 ? A G 20 ? 1_555 60.7 ? 77 O6 ? A G 15 ? A G 15 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 20 ? A G 20 ? 1_555 86.8 ? 78 O6 ? A G 5 ? A G 5 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 21 ? A G 21 ? 1_555 87.7 ? 79 O6 ? A G 6 ? A G 6 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 21 ? A G 21 ? 1_555 86.1 ? 80 O6 ? A G 10 ? A G 10 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 21 ? A G 21 ? 1_555 156.9 ? 81 O6 ? A G 11 ? A G 11 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 21 ? A G 21 ? 1_555 126.2 ? 82 O6 ? A G 14 ? A G 14 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 21 ? A G 21 ? 1_555 109.5 ? 83 O6 ? A G 15 ? A G 15 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 21 ? A G 21 ? 1_555 74.2 ? 84 O6 ? A G 20 ? A G 20 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A G 21 ? A G 21 ? 1_555 63.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-05-31 2 'Structure model' 1 1 2023-07-05 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -y,x-y,z+1/3 3 -x+y,-x,z+2/3 4 x-y,-y,-z+2/3 5 -x,-x+y,-z+1/3 6 y,x,-z # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487+SVN 1 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19.2_4158 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? pointless ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 5 # _pdbx_entry_details.entry_id 7SXP _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A U 1 ? "O5'" ? A U 1 "O5'" 2 1 Y 1 A U 1 ? "C5'" ? A U 1 "C5'" 3 1 Y 1 A U 1 ? "C4'" ? A U 1 "C4'" 4 1 Y 1 A U 1 ? "O4'" ? A U 1 "O4'" 5 1 Y 1 A U 1 ? "C3'" ? A U 1 "C3'" 6 1 Y 1 A U 1 ? "C2'" ? A U 1 "C2'" 7 1 Y 1 A U 1 ? "O2'" ? A U 1 "O2'" 8 1 Y 1 A U 1 ? "C1'" ? A U 1 "C1'" 9 1 Y 1 A U 1 ? N1 ? A U 1 N1 10 1 Y 1 A U 1 ? C2 ? A U 1 C2 11 1 Y 1 A U 1 ? O2 ? A U 1 O2 12 1 Y 1 A U 1 ? N3 ? A U 1 N3 13 1 Y 1 A U 1 ? C4 ? A U 1 C4 14 1 Y 1 A U 1 ? O4 ? A U 1 O4 15 1 Y 1 A U 1 ? C5 ? A U 1 C5 16 1 Y 1 A U 1 ? C6 ? A U 1 C6 17 1 Y 1 A A 7 ? "C5'" ? A A 7 "C5'" 18 1 Y 1 A A 7 ? "C4'" ? A A 7 "C4'" 19 1 Y 1 A A 7 ? "O4'" ? A A 7 "O4'" 20 1 Y 1 A A 7 ? "C3'" ? A A 7 "C3'" 21 1 Y 1 A A 7 ? "O3'" ? A A 7 "O3'" 22 1 Y 1 A A 7 ? "C2'" ? A A 7 "C2'" 23 1 Y 1 A A 7 ? "O2'" ? A A 7 "O2'" 24 1 Y 1 A A 7 ? "C1'" ? A A 7 "C1'" 25 1 Y 1 A A 7 ? N9 ? A A 7 N9 26 1 Y 1 A A 7 ? C8 ? A A 7 C8 27 1 Y 1 A A 7 ? N7 ? A A 7 N7 28 1 Y 1 A A 7 ? C5 ? A A 7 C5 29 1 Y 1 A A 7 ? C6 ? A A 7 C6 30 1 Y 1 A A 7 ? N6 ? A A 7 N6 31 1 Y 1 A A 7 ? N1 ? A A 7 N1 32 1 Y 1 A A 7 ? C2 ? A A 7 C2 33 1 Y 1 A A 7 ? N3 ? A A 7 N3 34 1 Y 1 A A 7 ? C4 ? A A 7 C4 35 1 Y 1 A U 16 ? C2 ? A U 16 C2 36 1 Y 1 A U 16 ? O2 ? A U 16 O2 37 1 Y 1 A U 16 ? N3 ? A U 16 N3 38 1 Y 1 A U 16 ? C4 ? A U 16 C4 39 1 Y 1 A U 16 ? O4 ? A U 16 O4 40 1 Y 1 A U 16 ? C5 ? A U 16 C5 41 1 Y 1 A U 16 ? C6 ? A U 16 C6 42 1 Y 1 A U 18 ? C2 ? A U 18 C2 43 1 Y 1 A U 18 ? O2 ? A U 18 O2 44 1 Y 1 A U 18 ? N3 ? A U 18 N3 45 1 Y 1 A U 18 ? C4 ? A U 18 C4 46 1 Y 1 A U 18 ? O4 ? A U 18 O4 47 1 Y 1 A U 18 ? C5 ? A U 18 C5 48 1 Y 1 A U 18 ? C6 ? A U 18 C6 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id U _pdbx_unobs_or_zero_occ_residues.auth_seq_id 8 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id U _pdbx_unobs_or_zero_occ_residues.label_seq_id 8 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7SXP 'double helix' 7SXP 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 2 1_555 A A 22 1_555 -2.723 -7.434 0.042 -17.887 -13.074 -170.847 1 A_G2:A22_A A 2 ? A 22 ? ? 6 1 A G 11 1_555 A G 6 1_555 1.441 -3.299 -0.563 10.656 9.311 -97.113 2 A_G11:G6_A A 11 ? A 6 ? 6 3 1 A G 5 1_555 A G 10 1_555 -1.558 3.548 0.077 -1.897 3.971 87.642 3 A_G5:G10_A A 5 ? A 10 ? 6 3 1 A G 20 1_555 A G 14 1_555 1.356 -3.636 0.281 7.452 -1.360 -92.720 4 A_G20:G14_A A 20 ? A 14 ? 6 3 1 A G 13 1_555 A G 19 1_555 1.183 3.601 -0.042 3.800 -5.349 -87.939 5 A_G13:G19_A A 13 ? A 19 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 11 1_555 A G 6 1_555 A G 5 1_555 A G 10 1_555 -0.239 0.201 3.192 6.984 -0.820 27.171 0.602 2.086 3.030 -1.708 -14.558 28.050 1 AA_G11G5:G10G6_AA A 11 ? A 6 ? A 5 ? A 10 ? 1 A G 5 1_555 A G 10 1_555 A G 20 1_555 A G 14 1_555 -1.389 3.552 0.299 -2.304 0.539 178.817 1.776 0.695 0.299 0.270 1.152 178.817 2 AA_G5G20:G14G10_AA A 5 ? A 10 ? A 20 ? A 14 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Heart, Lung, and Blood Institute (NIH/NHLBI)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 'CACODYLIC ACID' CAD # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5NYS _pdbx_initial_refinement_model.details 'Phased with only core' # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'P 31 2 1' _space_group.name_Hall ;P 31 2" ; _space_group.IT_number 152 _space_group.crystal_system trigonal _space_group.id 1 #