data_7SYC # _entry.id 7SYC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.353 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7SYC pdb_00007syc 10.2210/pdb7syc/pdb WWPDB D_1000261331 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.details . _pdbx_database_related.db_id KlpnC.00264.a.B1 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7SYC _pdbx_database_status.recvd_initial_deposition_date 2021-11-24 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Seattle Structural Genomics Center for Infectious Disease' 1 ? 'Seattle Structural Genomics Center for Infectious Disease (SSGCID)' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'to be published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal Structure of Nucleoside triphosphate pyrophosphohydrolase from Klebsiella pneumoniae subsp. pneumoniae' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'DeBouver, N.D.' 1 0000-0003-2545-6007 primary 'Lorimer, D.D.' 2 0000-0002-9638-8083 primary 'Horanyi, P.S.' 3 0000-0003-2218-9986 primary 'Edwards, T.E.' 4 0000-0002-0474-8003 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 7SYC _cell.details ? _cell.formula_units_Z ? _cell.length_a 67.140 _cell.length_a_esd ? _cell.length_b 67.140 _cell.length_b_esd ? _cell.length_c 136.000 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7SYC _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 7,8-dihydro-8-oxoguanine-triphosphatase 15905.060 1 3.6.1.55 ? KlpnC.00264.a.B1 ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 water nat water 18.015 108 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '8-oxo-dGTP diphosphatase,8-oxo-dGTP diphosphatase MutT' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAHHHHHHMKKLQIAVGIIRNPQGEIFITQRAADAHMANKLEFPGGKIESDETPEQALIRELQEEVGITVTTSSLFDKLE YQFPDRHITLWFFLVESWQGEPWGKEGQPGRWMAGPTLDPAAFPPANEPVISKLIAQGVSK ; _entity_poly.pdbx_seq_one_letter_code_can ;MAHHHHHHMKKLQIAVGIIRNPQGEIFITQRAADAHMANKLEFPGGKIESDETPEQALIRELQEEVGITVTTSSLFDKLE YQFPDRHITLWFFLVESWQGEPWGKEGQPGRWMAGPTLDPAAFPPANEPVISKLIAQGVSK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier KlpnC.00264.a.B1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 MET n 1 10 LYS n 1 11 LYS n 1 12 LEU n 1 13 GLN n 1 14 ILE n 1 15 ALA n 1 16 VAL n 1 17 GLY n 1 18 ILE n 1 19 ILE n 1 20 ARG n 1 21 ASN n 1 22 PRO n 1 23 GLN n 1 24 GLY n 1 25 GLU n 1 26 ILE n 1 27 PHE n 1 28 ILE n 1 29 THR n 1 30 GLN n 1 31 ARG n 1 32 ALA n 1 33 ALA n 1 34 ASP n 1 35 ALA n 1 36 HIS n 1 37 MET n 1 38 ALA n 1 39 ASN n 1 40 LYS n 1 41 LEU n 1 42 GLU n 1 43 PHE n 1 44 PRO n 1 45 GLY n 1 46 GLY n 1 47 LYS n 1 48 ILE n 1 49 GLU n 1 50 SER n 1 51 ASP n 1 52 GLU n 1 53 THR n 1 54 PRO n 1 55 GLU n 1 56 GLN n 1 57 ALA n 1 58 LEU n 1 59 ILE n 1 60 ARG n 1 61 GLU n 1 62 LEU n 1 63 GLN n 1 64 GLU n 1 65 GLU n 1 66 VAL n 1 67 GLY n 1 68 ILE n 1 69 THR n 1 70 VAL n 1 71 THR n 1 72 THR n 1 73 SER n 1 74 SER n 1 75 LEU n 1 76 PHE n 1 77 ASP n 1 78 LYS n 1 79 LEU n 1 80 GLU n 1 81 TYR n 1 82 GLN n 1 83 PHE n 1 84 PRO n 1 85 ASP n 1 86 ARG n 1 87 HIS n 1 88 ILE n 1 89 THR n 1 90 LEU n 1 91 TRP n 1 92 PHE n 1 93 PHE n 1 94 LEU n 1 95 VAL n 1 96 GLU n 1 97 SER n 1 98 TRP n 1 99 GLN n 1 100 GLY n 1 101 GLU n 1 102 PRO n 1 103 TRP n 1 104 GLY n 1 105 LYS n 1 106 GLU n 1 107 GLY n 1 108 GLN n 1 109 PRO n 1 110 GLY n 1 111 ARG n 1 112 TRP n 1 113 MET n 1 114 ALA n 1 115 GLY n 1 116 PRO n 1 117 THR n 1 118 LEU n 1 119 ASP n 1 120 PRO n 1 121 ALA n 1 122 ALA n 1 123 PHE n 1 124 PRO n 1 125 PRO n 1 126 ALA n 1 127 ASN n 1 128 GLU n 1 129 PRO n 1 130 VAL n 1 131 ILE n 1 132 SER n 1 133 LYS n 1 134 LEU n 1 135 ILE n 1 136 ALA n 1 137 GLN n 1 138 GLY n 1 139 VAL n 1 140 SER n 1 141 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 141 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'mutT, E3U38_03970, NCTC9504_05440, RJA_22585' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Klebsiella pneumoniae subsp. pneumoniae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 72407 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name KlpnC.00264.a.B1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A1Y0Q4X2_KLEPN _struct_ref.pdbx_db_accession A0A1Y0Q4X2 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKKLQIAVGIIRNPQGEIFITQRAADAHMANKLEFPGGKIESDETPEQALIRELQEEVGITVTTSSLFDKLEYQFPDRHI TLWFFLVESWQGEPWGKEGQPGRWMAGPTLDPAAFPPANEPVISKLIAQG ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 7SYC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 9 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 138 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A1Y0Q4X2 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 130 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 130 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 7SYC MET A 1 ? UNP A0A1Y0Q4X2 ? ? 'initiating methionine' -7 1 1 7SYC ALA A 2 ? UNP A0A1Y0Q4X2 ? ? 'expression tag' -6 2 1 7SYC HIS A 3 ? UNP A0A1Y0Q4X2 ? ? 'expression tag' -5 3 1 7SYC HIS A 4 ? UNP A0A1Y0Q4X2 ? ? 'expression tag' -4 4 1 7SYC HIS A 5 ? UNP A0A1Y0Q4X2 ? ? 'expression tag' -3 5 1 7SYC HIS A 6 ? UNP A0A1Y0Q4X2 ? ? 'expression tag' -2 6 1 7SYC HIS A 7 ? UNP A0A1Y0Q4X2 ? ? 'expression tag' -1 7 1 7SYC HIS A 8 ? UNP A0A1Y0Q4X2 ? ? 'expression tag' 0 8 1 7SYC VAL A 139 ? UNP A0A1Y0Q4X2 ? ? 'expression tag' 131 9 1 7SYC SER A 140 ? UNP A0A1Y0Q4X2 ? ? 'expression tag' 132 10 1 7SYC LYS A 141 ? UNP A0A1Y0Q4X2 ? ? 'expression tag' 133 11 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7SYC _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.78 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 55.78 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 287 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;KlpnC.00264.a.B1.PW38992 [Barcode: 322156a9] [pin_id: llw0-5] [collection: aps21idf 9/23/2021] [crystallization conditions: MCSG1 A9 0.1M HEPES/NaOH, pH 7.5, 0.2M MgCl2, 25% (w/v) PEG 3350] [cryo: 10% EG] ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details 'Beryllium Lenses' _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX-300' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-10-21 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Diamond [111]' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97872 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-F' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97872 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-F _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 39.300 _reflns.entry_id 7SYC _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.000 _reflns.d_resolution_low 44.190 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 12903 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.900 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 13.577 _reflns.pdbx_Rmerge_I_obs 0.045 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 32.730 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.935 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.046 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 175186 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.000 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 2.000 2.050 ? 5.060 ? 13241 923 ? 923 100.000 ? ? ? ? 0.576 ? ? ? ? ? ? ? ? 14.346 ? ? ? ? 0.598 ? ? 1 1 0.948 ? ? ? ? ? ? ? ? ? ? 2.050 2.110 ? 7.680 ? 12886 914 ? 914 100.000 ? ? ? ? 0.376 ? ? ? ? ? ? ? ? 14.098 ? ? ? ? 0.390 ? ? 2 1 0.975 ? ? ? ? ? ? ? ? ? ? 2.110 2.170 ? 8.990 ? 12501 877 ? 877 100.000 ? ? ? ? 0.322 ? ? ? ? ? ? ? ? 14.254 ? ? ? ? 0.334 ? ? 3 1 0.982 ? ? ? ? ? ? ? ? ? ? 2.170 2.240 ? 10.780 ? 12257 863 ? 863 100.000 ? ? ? ? 0.265 ? ? ? ? ? ? ? ? 14.203 ? ? ? ? 0.275 ? ? 4 1 0.987 ? ? ? ? ? ? ? ? ? ? 2.240 2.310 ? 13.050 ? 11664 819 ? 819 100.000 ? ? ? ? 0.219 ? ? ? ? ? ? ? ? 14.242 ? ? ? ? 0.227 ? ? 5 1 0.993 ? ? ? ? ? ? ? ? ? ? 2.310 2.390 ? 15.880 ? 11365 806 ? 806 100.000 ? ? ? ? 0.177 ? ? ? ? ? ? ? ? 14.100 ? ? ? ? 0.183 ? ? 6 1 0.995 ? ? ? ? ? ? ? ? ? ? 2.390 2.480 ? 19.470 ? 11104 788 ? 788 100.000 ? ? ? ? 0.144 ? ? ? ? ? ? ? ? 14.091 ? ? ? ? 0.149 ? ? 7 1 0.996 ? ? ? ? ? ? ? ? ? ? 2.480 2.580 ? 23.460 ? 10553 752 ? 752 100.000 ? ? ? ? 0.114 ? ? ? ? ? ? ? ? 14.033 ? ? ? ? 0.118 ? ? 8 1 0.998 ? ? ? ? ? ? ? ? ? ? 2.580 2.700 ? 30.440 ? 10021 724 ? 724 100.000 ? ? ? ? 0.084 ? ? ? ? ? ? ? ? 13.841 ? ? ? ? 0.088 ? ? 9 1 0.999 ? ? ? ? ? ? ? ? ? ? 2.700 2.830 ? 38.020 ? 9407 689 ? 689 100.000 ? ? ? ? 0.066 ? ? ? ? ? ? ? ? 13.653 ? ? ? ? 0.069 ? ? 10 1 0.999 ? ? ? ? ? ? ? ? ? ? 2.830 2.980 ? 43.340 ? 8884 666 ? 666 100.000 ? ? ? ? 0.057 ? ? ? ? ? ? ? ? 13.339 ? ? ? ? 0.060 ? ? 11 1 0.999 ? ? ? ? ? ? ? ? ? ? 2.980 3.160 ? 50.240 ? 8383 635 ? 635 100.000 ? ? ? ? 0.048 ? ? ? ? ? ? ? ? 13.202 ? ? ? ? 0.050 ? ? 12 1 0.999 ? ? ? ? ? ? ? ? ? ? 3.160 3.380 ? 56.320 ? 7674 599 ? 599 100.000 ? ? ? ? 0.040 ? ? ? ? ? ? ? ? 12.811 ? ? ? ? 0.042 ? ? 13 1 0.999 ? ? ? ? ? ? ? ? ? ? 3.380 3.650 ? 62.740 ? 7158 559 ? 559 100.000 ? ? ? ? 0.038 ? ? ? ? ? ? ? ? 12.805 ? ? ? ? 0.039 ? ? 14 1 0.999 ? ? ? ? ? ? ? ? ? ? 3.650 4.000 ? 66.380 ? 6653 523 ? 523 100.000 ? ? ? ? 0.031 ? ? ? ? ? ? ? ? 12.721 ? ? ? ? 0.032 ? ? 15 1 1.000 ? ? ? ? ? ? ? ? ? ? 4.000 4.470 ? 71.260 ? 6175 488 ? 488 100.000 ? ? ? ? 0.029 ? ? ? ? ? ? ? ? 12.654 ? ? ? ? 0.031 ? ? 16 1 1.000 ? ? ? ? ? ? ? ? ? ? 4.470 5.160 ? 72.120 ? 5357 423 ? 423 100.000 ? ? ? ? 0.027 ? ? ? ? ? ? ? ? 12.664 ? ? ? ? 0.028 ? ? 17 1 1.000 ? ? ? ? ? ? ? ? ? ? 5.160 6.320 ? 70.170 ? 4535 369 ? 369 100.000 ? ? ? ? 0.027 ? ? ? ? ? ? ? ? 12.290 ? ? ? ? 0.028 ? ? 18 1 1.000 ? ? ? ? ? ? ? ? ? ? 6.320 8.940 ? 69.920 ? 3622 306 ? 305 99.700 ? ? ? ? 0.024 ? ? ? ? ? ? ? ? 11.875 ? ? ? ? 0.026 ? ? 19 1 0.999 ? ? ? ? ? ? ? ? ? ? 8.940 44.190 ? 66.090 ? 1746 191 ? 181 94.800 ? ? ? ? 0.025 ? ? ? ? ? ? ? ? 9.646 ? ? ? ? 0.026 ? ? 20 1 0.999 ? ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 93.790 _refine.B_iso_mean 47.9441 _refine.B_iso_min 22.710 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7SYC _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.0000 _refine.ls_d_res_low 44.1900 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 12903 _refine.ls_number_reflns_R_free 1300 _refine.ls_number_reflns_R_work 11603 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.9300 _refine.ls_percent_reflns_R_free 10.0800 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2024 _refine.ls_R_factor_R_free 0.2406 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1979 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.350 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3A6S _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.1300 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2100 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id final _refine_hist.details ? _refine_hist.d_res_high 2.0000 _refine_hist.d_res_low 44.1900 _refine_hist.number_atoms_solvent 110 _refine_hist.number_atoms_total 1077 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total 122 _refine_hist.pdbx_B_iso_mean_ligand 55.03 _refine_hist.pdbx_B_iso_mean_solvent 50.63 _refine_hist.pdbx_number_atoms_protein 966 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.0000 2.0800 1395 . 135 1260 100.0000 . . . 0.2643 0.0000 0.2541 . . . . . . . 9 . . . 'X-RAY DIFFRACTION' 2.0800 2.1700 1389 . 143 1246 100.0000 . . . 0.2869 0.0000 0.2168 . . . . . . . 9 . . . 'X-RAY DIFFRACTION' 2.1800 2.2900 1389 . 124 1265 100.0000 . . . 0.2482 0.0000 0.2196 . . . . . . . 9 . . . 'X-RAY DIFFRACTION' 2.2900 2.4300 1409 . 133 1276 100.0000 . . . 0.2784 0.0000 0.2251 . . . . . . . 9 . . . 'X-RAY DIFFRACTION' 2.4300 2.6200 1411 . 132 1279 100.0000 . . . 0.2766 0.0000 0.2492 . . . . . . . 9 . . . 'X-RAY DIFFRACTION' 2.6200 2.8800 1412 . 149 1263 100.0000 . . . 0.2628 0.0000 0.2212 . . . . . . . 9 . . . 'X-RAY DIFFRACTION' 2.8800 3.3000 1447 . 150 1297 100.0000 . . . 0.2553 0.0000 0.2120 . . . . . . . 9 . . . 'X-RAY DIFFRACTION' 3.3000 4.1600 1474 . 160 1314 100.0000 . . . 0.2267 0.0000 0.1712 . . . . . . . 9 . . . 'X-RAY DIFFRACTION' 4.1600 44.1900 1577 . 174 1403 99.0000 . . . 0.2201 0.0000 0.1799 . . . . . . . 9 . . . # _struct.entry_id 7SYC _struct.title 'Crystal Structure of Nucleoside triphosphate pyrophosphohydrolase from Klebsiella pneumoniae subsp. pneumoniae' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7SYC _struct_keywords.text 'SSGCID, DNA repair, nudix hydrolase, hydrolase, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 53 ? GLY A 67 ? THR A 45 GLY A 59 1 ? 15 HELX_P HELX_P2 AA2 PRO A 116 ? LEU A 118 ? PRO A 108 LEU A 110 5 ? 3 HELX_P HELX_P3 AA3 ASP A 119 ? PHE A 123 ? ASP A 111 PHE A 115 5 ? 5 HELX_P HELX_P4 AA4 PRO A 124 ? ALA A 126 ? PRO A 116 ALA A 118 5 ? 3 HELX_P HELX_P5 AA5 ASN A 127 ? GLN A 137 ? ASN A 119 GLN A 129 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLU 61 OE1 ? ? ? 1_555 B MG . MG ? ? A GLU 53 A MG 201 1_555 ? ? ? ? ? ? ? 2.123 ? ? metalc2 metalc ? ? A GLU 65 OE2 ? ? ? 1_555 B MG . MG ? ? A GLU 57 A MG 201 1_555 ? ? ? ? ? ? ? 2.279 ? ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 201 A HOH 309 1_555 ? ? ? ? ? ? ? 1.912 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 201 A HOH 323 1_555 ? ? ? ? ? ? ? 2.174 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 201 A HOH 357 1_555 ? ? ? ? ? ? ? 2.073 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? A MG 201 A HOH 362 1_555 ? ? ? ? ? ? ? 2.352 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLY A 45 ? LYS A 47 ? GLY A 37 LYS A 39 AA1 2 LYS A 10 ? ILE A 19 ? LYS A 2 ILE A 11 AA1 3 ARG A 86 ? GLN A 99 ? ARG A 78 GLN A 91 AA1 4 THR A 69 ? GLN A 82 ? THR A 61 GLN A 74 AA2 1 GLU A 25 ? THR A 29 ? GLU A 17 THR A 21 AA2 2 GLY A 110 ? ALA A 114 ? GLY A 102 ALA A 106 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLY A 46 ? O GLY A 38 N ALA A 15 ? N ALA A 7 AA1 2 3 N ILE A 18 ? N ILE A 10 O PHE A 93 ? O PHE A 85 AA1 3 4 O PHE A 92 ? O PHE A 84 N PHE A 76 ? N PHE A 68 AA2 1 2 N ILE A 26 ? N ILE A 18 O MET A 113 ? O MET A 105 # _atom_sites.entry_id 7SYC _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.014894 _atom_sites.fract_transf_matrix[1][2] 0.008599 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017198 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007353 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C MG N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -7 ? ? ? A . n A 1 2 ALA 2 -6 ? ? ? A . n A 1 3 HIS 3 -5 ? ? ? A . n A 1 4 HIS 4 -4 ? ? ? A . n A 1 5 HIS 5 -3 ? ? ? A . n A 1 6 HIS 6 -2 ? ? ? A . n A 1 7 HIS 7 -1 -1 HIS HIS A . n A 1 8 HIS 8 0 0 HIS HIS A . n A 1 9 MET 9 1 1 MET MET A . n A 1 10 LYS 10 2 2 LYS LYS A . n A 1 11 LYS 11 3 3 LYS LYS A . n A 1 12 LEU 12 4 4 LEU LEU A . n A 1 13 GLN 13 5 5 GLN GLN A . n A 1 14 ILE 14 6 6 ILE ILE A . n A 1 15 ALA 15 7 7 ALA ALA A . n A 1 16 VAL 16 8 8 VAL VAL A . n A 1 17 GLY 17 9 9 GLY GLY A . n A 1 18 ILE 18 10 10 ILE ILE A . n A 1 19 ILE 19 11 11 ILE ILE A . n A 1 20 ARG 20 12 12 ARG ARG A . n A 1 21 ASN 21 13 13 ASN ASN A . n A 1 22 PRO 22 14 14 PRO PRO A . n A 1 23 GLN 23 15 15 GLN GLN A . n A 1 24 GLY 24 16 16 GLY GLY A . n A 1 25 GLU 25 17 17 GLU GLU A . n A 1 26 ILE 26 18 18 ILE ILE A . n A 1 27 PHE 27 19 19 PHE PHE A . n A 1 28 ILE 28 20 20 ILE ILE A . n A 1 29 THR 29 21 21 THR THR A . n A 1 30 GLN 30 22 22 GLN GLN A . n A 1 31 ARG 31 23 ? ? ? A . n A 1 32 ALA 32 24 ? ? ? A . n A 1 33 ALA 33 25 ? ? ? A . n A 1 34 ASP 34 26 ? ? ? A . n A 1 35 ALA 35 27 ? ? ? A . n A 1 36 HIS 36 28 ? ? ? A . n A 1 37 MET 37 29 ? ? ? A . n A 1 38 ALA 38 30 ? ? ? A . n A 1 39 ASN 39 31 ? ? ? A . n A 1 40 LYS 40 32 32 LYS LYS A . n A 1 41 LEU 41 33 33 LEU LEU A . n A 1 42 GLU 42 34 34 GLU GLU A . n A 1 43 PHE 43 35 35 PHE PHE A . n A 1 44 PRO 44 36 36 PRO PRO A . n A 1 45 GLY 45 37 37 GLY GLY A . n A 1 46 GLY 46 38 38 GLY GLY A . n A 1 47 LYS 47 39 39 LYS LYS A . n A 1 48 ILE 48 40 40 ILE ILE A . n A 1 49 GLU 49 41 41 GLU GLU A . n A 1 50 SER 50 42 42 SER SER A . n A 1 51 ASP 51 43 43 ASP ASP A . n A 1 52 GLU 52 44 44 GLU GLU A . n A 1 53 THR 53 45 45 THR THR A . n A 1 54 PRO 54 46 46 PRO PRO A . n A 1 55 GLU 55 47 47 GLU GLU A . n A 1 56 GLN 56 48 48 GLN GLN A . n A 1 57 ALA 57 49 49 ALA ALA A . n A 1 58 LEU 58 50 50 LEU LEU A . n A 1 59 ILE 59 51 51 ILE ILE A . n A 1 60 ARG 60 52 52 ARG ARG A . n A 1 61 GLU 61 53 53 GLU GLU A . n A 1 62 LEU 62 54 54 LEU LEU A . n A 1 63 GLN 63 55 55 GLN GLN A . n A 1 64 GLU 64 56 56 GLU GLU A . n A 1 65 GLU 65 57 57 GLU GLU A . n A 1 66 VAL 66 58 58 VAL VAL A . n A 1 67 GLY 67 59 59 GLY GLY A . n A 1 68 ILE 68 60 60 ILE ILE A . n A 1 69 THR 69 61 61 THR THR A . n A 1 70 VAL 70 62 62 VAL VAL A . n A 1 71 THR 71 63 63 THR THR A . n A 1 72 THR 72 64 64 THR THR A . n A 1 73 SER 73 65 65 SER SER A . n A 1 74 SER 74 66 66 SER SER A . n A 1 75 LEU 75 67 67 LEU LEU A . n A 1 76 PHE 76 68 68 PHE PHE A . n A 1 77 ASP 77 69 69 ASP ASP A . n A 1 78 LYS 78 70 70 LYS LYS A . n A 1 79 LEU 79 71 71 LEU LEU A . n A 1 80 GLU 80 72 72 GLU GLU A . n A 1 81 TYR 81 73 73 TYR TYR A . n A 1 82 GLN 82 74 74 GLN GLN A . n A 1 83 PHE 83 75 75 PHE PHE A . n A 1 84 PRO 84 76 76 PRO PRO A . n A 1 85 ASP 85 77 77 ASP ASP A . n A 1 86 ARG 86 78 78 ARG ARG A . n A 1 87 HIS 87 79 79 HIS HIS A . n A 1 88 ILE 88 80 80 ILE ILE A . n A 1 89 THR 89 81 81 THR THR A . n A 1 90 LEU 90 82 82 LEU LEU A . n A 1 91 TRP 91 83 83 TRP TRP A . n A 1 92 PHE 92 84 84 PHE PHE A . n A 1 93 PHE 93 85 85 PHE PHE A . n A 1 94 LEU 94 86 86 LEU LEU A . n A 1 95 VAL 95 87 87 VAL VAL A . n A 1 96 GLU 96 88 88 GLU GLU A . n A 1 97 SER 97 89 89 SER SER A . n A 1 98 TRP 98 90 90 TRP TRP A . n A 1 99 GLN 99 91 91 GLN GLN A . n A 1 100 GLY 100 92 92 GLY GLY A . n A 1 101 GLU 101 93 93 GLU GLU A . n A 1 102 PRO 102 94 94 PRO PRO A . n A 1 103 TRP 103 95 95 TRP TRP A . n A 1 104 GLY 104 96 96 GLY GLY A . n A 1 105 LYS 105 97 97 LYS LYS A . n A 1 106 GLU 106 98 98 GLU GLU A . n A 1 107 GLY 107 99 99 GLY GLY A . n A 1 108 GLN 108 100 100 GLN GLN A . n A 1 109 PRO 109 101 101 PRO PRO A . n A 1 110 GLY 110 102 102 GLY GLY A . n A 1 111 ARG 111 103 103 ARG ARG A . n A 1 112 TRP 112 104 104 TRP TRP A . n A 1 113 MET 113 105 105 MET MET A . n A 1 114 ALA 114 106 106 ALA ALA A . n A 1 115 GLY 115 107 107 GLY GLY A . n A 1 116 PRO 116 108 108 PRO PRO A . n A 1 117 THR 117 109 109 THR THR A . n A 1 118 LEU 118 110 110 LEU LEU A . n A 1 119 ASP 119 111 111 ASP ASP A . n A 1 120 PRO 120 112 112 PRO PRO A . n A 1 121 ALA 121 113 113 ALA ALA A . n A 1 122 ALA 122 114 114 ALA ALA A . n A 1 123 PHE 123 115 115 PHE PHE A . n A 1 124 PRO 124 116 116 PRO PRO A . n A 1 125 PRO 125 117 117 PRO PRO A . n A 1 126 ALA 126 118 118 ALA ALA A . n A 1 127 ASN 127 119 119 ASN ASN A . n A 1 128 GLU 128 120 120 GLU GLU A . n A 1 129 PRO 129 121 121 PRO PRO A . n A 1 130 VAL 130 122 122 VAL VAL A . n A 1 131 ILE 131 123 123 ILE ILE A . n A 1 132 SER 132 124 124 SER SER A . n A 1 133 LYS 133 125 125 LYS LYS A . n A 1 134 LEU 134 126 126 LEU LEU A . n A 1 135 ILE 135 127 127 ILE ILE A . n A 1 136 ALA 136 128 128 ALA ALA A . n A 1 137 GLN 137 129 129 GLN GLN A . n A 1 138 GLY 138 130 ? ? ? A . n A 1 139 VAL 139 131 ? ? ? A . n A 1 140 SER 140 132 ? ? ? A . n A 1 141 LYS 141 133 ? ? ? A . n # _pdbx_contact_author.id 7 _pdbx_contact_author.email Nicholas.DeBouver@ucb.com _pdbx_contact_author.name_first Nicholas _pdbx_contact_author.name_last DeBouver _pdbx_contact_author.name_mi D _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-2545-6007 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NIAID, National Institute of Allergy and Infectious Diseases' _pdbx_SG_project.full_name_of_center 'Seattle Structural Genomics Center for Infectious Disease' _pdbx_SG_project.initial_of_center SSGCID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 201 1 MG MG A . C 3 HOH 1 301 43 HOH HOH A . C 3 HOH 2 302 4 HOH HOH A . C 3 HOH 3 303 66 HOH HOH A . C 3 HOH 4 304 83 HOH HOH A . C 3 HOH 5 305 17 HOH HOH A . C 3 HOH 6 306 7 HOH HOH A . C 3 HOH 7 307 105 HOH HOH A . C 3 HOH 8 308 112 HOH HOH A . C 3 HOH 9 309 98 HOH HOH A . C 3 HOH 10 310 71 HOH HOH A . C 3 HOH 11 311 49 HOH HOH A . C 3 HOH 12 312 27 HOH HOH A . C 3 HOH 13 313 110 HOH HOH A . C 3 HOH 14 314 59 HOH HOH A . C 3 HOH 15 315 79 HOH HOH A . C 3 HOH 16 316 77 HOH HOH A . C 3 HOH 17 317 38 HOH HOH A . C 3 HOH 18 318 8 HOH HOH A . C 3 HOH 19 319 101 HOH HOH A . C 3 HOH 20 320 34 HOH HOH A . C 3 HOH 21 321 108 HOH HOH A . C 3 HOH 22 322 9 HOH HOH A . C 3 HOH 23 323 97 HOH HOH A . C 3 HOH 24 324 88 HOH HOH A . C 3 HOH 25 325 2 HOH HOH A . C 3 HOH 26 326 3 HOH HOH A . C 3 HOH 27 327 16 HOH HOH A . C 3 HOH 28 328 5 HOH HOH A . C 3 HOH 29 329 104 HOH HOH A . C 3 HOH 30 330 6 HOH HOH A . C 3 HOH 31 331 72 HOH HOH A . C 3 HOH 32 332 21 HOH HOH A . C 3 HOH 33 333 54 HOH HOH A . C 3 HOH 34 334 13 HOH HOH A . C 3 HOH 35 335 75 HOH HOH A . C 3 HOH 36 336 1 HOH HOH A . C 3 HOH 37 337 10 HOH HOH A . C 3 HOH 38 338 24 HOH HOH A . C 3 HOH 39 339 107 HOH HOH A . C 3 HOH 40 340 91 HOH HOH A . C 3 HOH 41 341 19 HOH HOH A . C 3 HOH 42 342 51 HOH HOH A . C 3 HOH 43 343 40 HOH HOH A . C 3 HOH 44 344 47 HOH HOH A . C 3 HOH 45 345 82 HOH HOH A . C 3 HOH 46 346 69 HOH HOH A . C 3 HOH 47 347 14 HOH HOH A . C 3 HOH 48 348 12 HOH HOH A . C 3 HOH 49 349 15 HOH HOH A . C 3 HOH 50 350 32 HOH HOH A . C 3 HOH 51 351 103 HOH HOH A . C 3 HOH 52 352 102 HOH HOH A . C 3 HOH 53 353 73 HOH HOH A . C 3 HOH 54 354 22 HOH HOH A . C 3 HOH 55 355 44 HOH HOH A . C 3 HOH 56 356 50 HOH HOH A . C 3 HOH 57 357 95 HOH HOH A . C 3 HOH 58 358 31 HOH HOH A . C 3 HOH 59 359 94 HOH HOH A . C 3 HOH 60 360 76 HOH HOH A . C 3 HOH 61 361 20 HOH HOH A . C 3 HOH 62 362 96 HOH HOH A . C 3 HOH 63 363 60 HOH HOH A . C 3 HOH 64 364 30 HOH HOH A . C 3 HOH 65 365 90 HOH HOH A . C 3 HOH 66 366 29 HOH HOH A . C 3 HOH 67 367 28 HOH HOH A . C 3 HOH 68 368 81 HOH HOH A . C 3 HOH 69 369 118 HOH HOH A . C 3 HOH 70 370 48 HOH HOH A . C 3 HOH 71 371 117 HOH HOH A . C 3 HOH 72 372 111 HOH HOH A . C 3 HOH 73 373 42 HOH HOH A . C 3 HOH 74 374 46 HOH HOH A . C 3 HOH 75 375 92 HOH HOH A . C 3 HOH 76 376 85 HOH HOH A . C 3 HOH 77 377 25 HOH HOH A . C 3 HOH 78 378 99 HOH HOH A . C 3 HOH 79 379 56 HOH HOH A . C 3 HOH 80 380 87 HOH HOH A . C 3 HOH 81 381 89 HOH HOH A . C 3 HOH 82 382 52 HOH HOH A . C 3 HOH 83 383 11 HOH HOH A . C 3 HOH 84 384 106 HOH HOH A . C 3 HOH 85 385 67 HOH HOH A . C 3 HOH 86 386 57 HOH HOH A . C 3 HOH 87 387 36 HOH HOH A . C 3 HOH 88 388 35 HOH HOH A . C 3 HOH 89 389 33 HOH HOH A . C 3 HOH 90 390 64 HOH HOH A . C 3 HOH 91 391 116 HOH HOH A . C 3 HOH 92 392 58 HOH HOH A . C 3 HOH 93 393 39 HOH HOH A . C 3 HOH 94 394 78 HOH HOH A . C 3 HOH 95 395 84 HOH HOH A . C 3 HOH 96 396 100 HOH HOH A . C 3 HOH 97 397 68 HOH HOH A . C 3 HOH 98 398 113 HOH HOH A . C 3 HOH 99 399 65 HOH HOH A . C 3 HOH 100 400 41 HOH HOH A . C 3 HOH 101 401 109 HOH HOH A . C 3 HOH 102 402 23 HOH HOH A . C 3 HOH 103 403 86 HOH HOH A . C 3 HOH 104 404 63 HOH HOH A . C 3 HOH 105 405 115 HOH HOH A . C 3 HOH 106 406 62 HOH HOH A . C 3 HOH 107 407 80 HOH HOH A . C 3 HOH 108 408 114 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 338 ? C HOH . 2 1 A HOH 389 ? C HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLU 61 ? A GLU 53 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 OE2 ? A GLU 65 ? A GLU 57 ? 1_555 89.5 ? 2 OE1 ? A GLU 61 ? A GLU 53 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? C HOH . ? A HOH 309 ? 1_555 100.4 ? 3 OE2 ? A GLU 65 ? A GLU 57 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? C HOH . ? A HOH 309 ? 1_555 73.2 ? 4 OE1 ? A GLU 61 ? A GLU 53 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? C HOH . ? A HOH 323 ? 1_555 75.9 ? 5 OE2 ? A GLU 65 ? A GLU 57 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? C HOH . ? A HOH 323 ? 1_555 94.2 ? 6 O ? C HOH . ? A HOH 309 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? C HOH . ? A HOH 323 ? 1_555 167.0 ? 7 OE1 ? A GLU 61 ? A GLU 53 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? C HOH . ? A HOH 357 ? 1_555 92.5 ? 8 OE2 ? A GLU 65 ? A GLU 57 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? C HOH . ? A HOH 357 ? 1_555 172.8 ? 9 O ? C HOH . ? A HOH 309 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? C HOH . ? A HOH 357 ? 1_555 113.2 ? 10 O ? C HOH . ? A HOH 323 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? C HOH . ? A HOH 357 ? 1_555 79.6 ? 11 OE1 ? A GLU 61 ? A GLU 53 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? C HOH . ? A HOH 362 ? 1_555 158.5 ? 12 OE2 ? A GLU 65 ? A GLU 57 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? C HOH . ? A HOH 362 ? 1_555 79.2 ? 13 O ? C HOH . ? A HOH 309 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? C HOH . ? A HOH 362 ? 1_555 93.8 ? 14 O ? C HOH . ? A HOH 323 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? C HOH . ? A HOH 362 ? 1_555 86.7 ? 15 O ? C HOH . ? A HOH 357 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? C HOH . ? A HOH 362 ? 1_555 96.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2021-12-08 2 'Structure model' 1 1 2021-12-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 2 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_citation.title' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -29.6923 19.4908 2.5525 0.2912 ? -0.0180 ? -0.0882 ? 0.4158 ? 0.1535 ? 0.4096 ? 5.0055 ? 2.7614 ? -1.4384 ? 5.0288 ? -1.0783 ? 2.5823 ? 0.1071 ? -0.2091 ? -0.1444 ? -0.0100 ? 0.2208 ? 0.5024 ? 0.4751 ? -0.0946 ? -0.2219 ? 2 'X-RAY DIFFRACTION' ? refined -15.3617 36.0321 -8.8077 0.2636 ? 0.0808 ? 0.0400 ? 0.5854 ? 0.2108 ? 0.3858 ? 6.8831 ? 2.6095 ? -0.2960 ? 2.7744 ? 1.3282 ? 3.5294 ? -0.2751 ? 1.5786 ? 0.4369 ? -0.8160 ? 0.9135 ? -0.4140 ? -0.3785 ? 0.2180 ? -0.1984 ? 3 'X-RAY DIFFRACTION' ? refined -22.7139 26.2895 -10.1932 0.3921 ? 0.0946 ? -0.0751 ? 0.9697 ? -0.0424 ? 0.4521 ? 6.1623 ? 2.5900 ? -0.8294 ? 8.3879 ? -0.7095 ? 8.0130 ? -0.0908 ? 1.4974 ? -1.4744 ? -1.3369 ? 0.0264 ? 0.5781 ? 0.6066 ? -0.4863 ? -0.1553 ? 4 'X-RAY DIFFRACTION' ? refined -21.2350 17.7971 6.5986 0.3951 ? 0.0036 ? -0.0902 ? 0.3325 ? 0.0175 ? 0.5220 ? 7.4251 ? 1.6888 ? -4.1683 ? 6.7813 ? 3.0759 ? 9.9581 ? 0.0805 ? 0.5100 ? -0.7689 ? 1.0540 ? 0.0600 ? -0.3940 ? 2.1537 ? -0.0702 ? 0.4290 ? 5 'X-RAY DIFFRACTION' ? refined -14.5394 22.6528 0.8175 0.2297 ? 0.0355 ? -0.0437 ? 0.4534 ? 0.0570 ? 0.5576 ? 5.2357 ? 1.2878 ? -5.4089 ? 4.3380 ? 0.4422 ? 6.4242 ? -0.1091 ? 0.1828 ? -0.4118 ? 0.0224 ? 0.0403 ? -1.1878 ? 0.4429 ? 0.3750 ? -0.1198 ? 6 'X-RAY DIFFRACTION' ? refined -24.4382 29.9964 3.4429 0.2023 ? 0.0478 ? 0.0030 ? 0.4562 ? 0.0712 ? 0.3296 ? 0.8549 ? 0.8266 ? 0.5983 ? 4.5461 ? 1.3263 ? 3.2533 ? 0.4214 ? -0.1820 ? 0.6327 ? 0.0548 ? -0.1152 ? 0.3014 ? -0.2718 ? -0.1091 ? -0.2158 ? 7 'X-RAY DIFFRACTION' ? refined -30.2238 24.1080 1.6513 0.2001 ? 0.0292 ? -0.0088 ? 0.4163 ? 0.1042 ? 0.3954 ? 4.4879 ? 5.0626 ? -0.2320 ? 4.6850 ? 0.4557 ? 1.3466 ? 0.0291 ? -0.1884 ? -0.3659 ? -0.2294 ? -0.1811 ? -0.1314 ? 0.2742 ? -0.0443 ? 0.1166 ? 8 'X-RAY DIFFRACTION' ? refined -10.4921 26.6089 -7.4831 0.3397 ? 0.0379 ? 0.0890 ? 0.7591 ? -0.1161 ? 0.4637 ? 8.0434 ? 0.1028 ? 2.3668 ? 6.6989 ? -1.7929 ? 4.9637 ? 0.1832 ? 1.5505 ? -0.9822 ? -0.9727 ? -0.2339 ? -0.4864 ? 0.5897 ? 0.2445 ? -0.0162 ? 9 'X-RAY DIFFRACTION' ? refined -18.3100 35.7261 -13.6626 0.3050 ? 0.1115 ? -0.0343 ? 1.0032 ? 0.3026 ? 0.4192 ? 9.1745 ? -3.4936 ? 3.6279 ? 7.0247 ? -1.3272 ? 5.8890 ? -0.3507 ? 2.9481 ? 0.1884 ? -0.9483 ? -0.0054 ? 0.8923 ? -0.1157 ? -1.0516 ? 0.4860 ? 10 'X-RAY DIFFRACTION' ? refined -28.9346 34.7503 -8.2291 0.3334 ? 0.1118 ? -0.0496 ? 0.9600 ? 0.1282 ? 0.5716 ? 7.3272 ? -0.1915 ? 1.5455 ? 2.6932 ? -1.9058 ? 8.5508 ? -0.0860 ? 1.4912 ? 0.8611 ? -0.4114 ? -0.0456 ? 0.4257 ? -1.0960 ? -2.1021 ? 0.0881 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? A -1 ? ? ? A 11 ? ? ;chain 'A' and (resid -1 through 11 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? A 12 ? ? ? A 21 ? ? ;chain 'A' and (resid 12 through 21 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? A 22 ? ? ? A 36 ? ? ;chain 'A' and (resid 22 through 36 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? A 37 ? ? ? A 45 ? ? ;chain 'A' and (resid 37 through 45 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? A 46 ? ? ? A 60 ? ? ;chain 'A' and (resid 46 through 60 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? A 61 ? ? ? A 74 ? ? ;chain 'A' and (resid 61 through 74 ) ; 7 'X-RAY DIFFRACTION' 7 ? ? A 75 ? ? ? A 87 ? ? ;chain 'A' and (resid 75 through 87 ) ; 8 'X-RAY DIFFRACTION' 8 ? ? A 88 ? ? ? A 101 ? ? ;chain 'A' and (resid 88 through 101 ) ; 9 'X-RAY DIFFRACTION' 9 ? ? A 102 ? ? ? A 109 ? ? ;chain 'A' and (resid 102 through 109 ) ; 10 'X-RAY DIFFRACTION' 10 ? ? A 110 ? ? ? A 129 ? ? ;chain 'A' and (resid 110 through 129 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20rc3_4406 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? MoRDa ? ? ? . 5 # _pdbx_entry_details.entry_id 7SYC _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 407 ? 5.89 . 2 1 O ? A HOH 408 ? 6.15 . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 2 ? CG ? A LYS 10 CG 2 1 Y 1 A LYS 2 ? CD ? A LYS 10 CD 3 1 Y 1 A LYS 2 ? CE ? A LYS 10 CE 4 1 Y 1 A LYS 2 ? NZ ? A LYS 10 NZ 5 1 Y 1 A GLN 22 ? CG ? A GLN 30 CG 6 1 Y 1 A GLN 22 ? CD ? A GLN 30 CD 7 1 Y 1 A GLN 22 ? OE1 ? A GLN 30 OE1 8 1 Y 1 A GLN 22 ? NE2 ? A GLN 30 NE2 9 1 Y 1 A LYS 32 ? CG ? A LYS 40 CG 10 1 Y 1 A LYS 32 ? CD ? A LYS 40 CD 11 1 Y 1 A LYS 32 ? CE ? A LYS 40 CE 12 1 Y 1 A LYS 32 ? NZ ? A LYS 40 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -7 ? A MET 1 2 1 Y 1 A ALA -6 ? A ALA 2 3 1 Y 1 A HIS -5 ? A HIS 3 4 1 Y 1 A HIS -4 ? A HIS 4 5 1 Y 1 A HIS -3 ? A HIS 5 6 1 Y 1 A HIS -2 ? A HIS 6 7 1 Y 1 A ARG 23 ? A ARG 31 8 1 Y 1 A ALA 24 ? A ALA 32 9 1 Y 1 A ALA 25 ? A ALA 33 10 1 Y 1 A ASP 26 ? A ASP 34 11 1 Y 1 A ALA 27 ? A ALA 35 12 1 Y 1 A HIS 28 ? A HIS 36 13 1 Y 1 A MET 29 ? A MET 37 14 1 Y 1 A ALA 30 ? A ALA 38 15 1 Y 1 A ASN 31 ? A ASN 39 16 1 Y 1 A GLY 130 ? A GLY 138 17 1 Y 1 A VAL 131 ? A VAL 139 18 1 Y 1 A SER 132 ? A SER 140 19 1 Y 1 A LYS 133 ? A LYS 141 # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id MG _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id MG _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #