HEADER VIRUS 03-DEC-21 7T2E TITLE STRUCTURE OF BACTERIOPHAGE LAMBDA TUBE PROTEIN V IN C6 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TAIL TUBE PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: TTP,GENE PRODUCT V,GPV,MAJOR TAIL PROTEIN V; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA VIRUS LAMBDA; SOURCE 3 ORGANISM_TAXID: 10710; SOURCE 4 GENE: V, LAMBDAP13; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS VIRUS, PHAGE, LAMBDA, SIPHOVIRIDAE, TAIL, TUBE EXPDTA ELECTRON MICROSCOPY AUTHOR N.S.PROKHOROV,Q.YANG,C.E.CATALANO,M.C.MORAIS REVDAT 2 05-JUN-24 7T2E 1 REMARK REVDAT 1 07-DEC-22 7T2E 0 JRNL AUTH N.S.PROKHOROV,Q.YANG,C.E.CATALANO,M.C.MORAIS JRNL TITL STRUCTURE OF BACTERIOPHAGE LAMBDA TUBE PROTEIN V IN C6 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.700 REMARK 3 NUMBER OF PARTICLES : 653608 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7T2E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1000261523. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : ESCHERICHIA VIRUS LAMBDA REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 3560.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-25611 RELATED DB: EMDB REMARK 900 STRUCTURE OF BACTERIOPHAGE LAMBDA TUBE PROTEIN V IN C6 DBREF 7T2E A 2 157 UNP P03733 TUBE_LAMBD 2 157 DBREF 7T2E B 2 157 UNP P03733 TUBE_LAMBD 2 157 SEQRES 1 A 156 PRO VAL PRO ASN PRO THR MET PRO VAL LYS GLY ALA GLY SEQRES 2 A 156 THR THR LEU TRP VAL TYR LYS GLY SER GLY ASP PRO TYR SEQRES 3 A 156 ALA ASN PRO LEU SER ASP VAL ASP TRP SER ARG LEU ALA SEQRES 4 A 156 LYS VAL LYS ASP LEU THR PRO GLY GLU LEU THR ALA GLU SEQRES 5 A 156 SER TYR ASP ASP SER TYR LEU ASP ASP GLU ASP ALA ASP SEQRES 6 A 156 TRP THR ALA THR GLY GLN GLY GLN LYS SER ALA GLY ASP SEQRES 7 A 156 THR SER PHE THR LEU ALA TRP MET PRO GLY GLU GLN GLY SEQRES 8 A 156 GLN GLN ALA LEU LEU ALA TRP PHE ASN GLU GLY ASP THR SEQRES 9 A 156 ARG ALA TYR LYS ILE ARG PHE PRO ASN GLY THR VAL ASP SEQRES 10 A 156 VAL PHE ARG GLY TRP VAL SER SER ILE GLY LYS ALA VAL SEQRES 11 A 156 THR ALA LYS GLU VAL ILE THR ARG THR VAL LYS VAL THR SEQRES 12 A 156 ASN VAL GLY ARG PRO SER MET ALA GLU ASP ARG SER THR SEQRES 1 B 156 PRO VAL PRO ASN PRO THR MET PRO VAL LYS GLY ALA GLY SEQRES 2 B 156 THR THR LEU TRP VAL TYR LYS GLY SER GLY ASP PRO TYR SEQRES 3 B 156 ALA ASN PRO LEU SER ASP VAL ASP TRP SER ARG LEU ALA SEQRES 4 B 156 LYS VAL LYS ASP LEU THR PRO GLY GLU LEU THR ALA GLU SEQRES 5 B 156 SER TYR ASP ASP SER TYR LEU ASP ASP GLU ASP ALA ASP SEQRES 6 B 156 TRP THR ALA THR GLY GLN GLY GLN LYS SER ALA GLY ASP SEQRES 7 B 156 THR SER PHE THR LEU ALA TRP MET PRO GLY GLU GLN GLY SEQRES 8 B 156 GLN GLN ALA LEU LEU ALA TRP PHE ASN GLU GLY ASP THR SEQRES 9 B 156 ARG ALA TYR LYS ILE ARG PHE PRO ASN GLY THR VAL ASP SEQRES 10 B 156 VAL PHE ARG GLY TRP VAL SER SER ILE GLY LYS ALA VAL SEQRES 11 B 156 THR ALA LYS GLU VAL ILE THR ARG THR VAL LYS VAL THR SEQRES 12 B 156 ASN VAL GLY ARG PRO SER MET ALA GLU ASP ARG SER THR HELIX 1 AA1 GLU A 90 GLY A 103 1 14 HELIX 2 AA2 MET A 151 SER A 156 5 6 HELIX 3 AA3 GLU B 90 GLY B 103 1 14 HELIX 4 AA4 MET B 151 SER B 156 5 6 SHEET 1 AA1 7 TRP A 36 ARG A 38 0 SHEET 2 AA1 7 THR A 16 TYR A 20 -1 N VAL A 19 O SER A 37 SHEET 3 AA1 7 ARG A 106 ARG A 111 -1 O ALA A 107 N TYR A 20 SHEET 4 AA1 7 VAL A 117 THR A 132 -1 O PHE A 120 N TYR A 108 SHEET 5 AA1 7 GLU A 135 ASN A 145 -1 O THR A 144 N TRP A 123 SHEET 6 AA1 7 ASP A 79 ALA A 85 -1 N PHE A 82 O VAL A 141 SHEET 7 AA1 7 VAL A 42 THR A 46 -1 N LYS A 43 O THR A 83 SHEET 1 AA2 2 THR A 51 ASP A 56 0 SHEET 2 AA2 2 THR A 70 SER A 76 -1 O GLY A 73 N GLU A 53 SHEET 1 AA3 7 TRP B 36 ARG B 38 0 SHEET 2 AA3 7 THR B 16 TYR B 20 -1 N VAL B 19 O SER B 37 SHEET 3 AA3 7 ARG B 106 ARG B 111 -1 O ALA B 107 N TYR B 20 SHEET 4 AA3 7 VAL B 117 THR B 132 -1 O PHE B 120 N TYR B 108 SHEET 5 AA3 7 GLU B 135 ASN B 145 -1 O THR B 144 N TRP B 123 SHEET 6 AA3 7 ASP B 79 ALA B 85 -1 N PHE B 82 O VAL B 141 SHEET 7 AA3 7 VAL B 42 THR B 46 -1 N LYS B 43 O THR B 83 SHEET 1 AA4 2 THR B 51 ASP B 56 0 SHEET 2 AA4 2 THR B 70 SER B 76 -1 O GLY B 73 N GLU B 53 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000