HEADER VIRAL PROTEIN/IMMUNE SYSTEM 06-DEC-21 7T2P TITLE THE ENVELOPE GLYCOPROTEIN SIVMAC239.K180S SOSIP TRIMER IN COMPLEX WITH TITLE 2 3 COPIES OF THE NEUTRALIZING ANTIBODY K11 CAVEAT 7T2P RESIDUES ILE H 51 AND SER H 52 THAT ARE NEXT TO EACH OTHER CAVEAT 2 7T2P IN THE SAMPLE SEQUENCE ARE NOT PROPERLY LINKED: DISTANCE CAVEAT 3 7T2P BETWEEN C AND N IS 3.95. RESIDUES SER H 52 AND TYR H 52A CAVEAT 4 7T2P THAT ARE NEXT TO EACH OTHER IN THE SAMPLE SEQUENCE ARE NOT CAVEAT 5 7T2P PROPERLY LINKED: DISTANCE BETWEEN C AND N IS 5.54. RESIDUES CAVEAT 6 7T2P TYR H 52A AND ASP H 53 THAT ARE NEXT TO EACH OTHER IN THE CAVEAT 7 7T2P SAMPLE SEQUENCE ARE NOT PROPERLY LINKED: DISTANCE BETWEEN C CAVEAT 8 7T2P AND N IS 3.35. COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENVELOPE GLYCOPROTEIN GP120; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-525; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ENVELOPE GLYCOPROTEIN GP41; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: UNP RESIDUES 515-662; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: K11 FAB HEAVY CHAIN; COMPND 14 CHAIN: H; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: K11 FAB LIGHT CHAIN; COMPND 18 CHAIN: L; COMPND 19 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SIMIAN IMMUNODEFICIENCY VIRUS; SOURCE 3 ORGANISM_TAXID: 11723; SOURCE 4 GENE: ENV; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: SIMIAN IMMUNODEFICIENCY VIRUS; SOURCE 9 ORGANISM_TAXID: 11723; SOURCE 10 GENE: ENV; SOURCE 11 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: MACACA MULATTA; SOURCE 15 ORGANISM_TAXID: 9544; SOURCE 16 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 18 MOL_ID: 4; SOURCE 19 ORGANISM_SCIENTIFIC: MACACA MULATTA; SOURCE 20 ORGANISM_TAXID: 9544; SOURCE 21 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS SIV, ENV, VACCINE, NEUTRALIZING ANTIBODY, GLYCOPROTEIN, VIRAL KEYWDS 2 PROTEIN, VIRAL PROTEIN-IMMUNE SYSTEM COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR Z.T.BERNDSEN,A.B.WARD REVDAT 2 05-JUL-23 7T2P 1 AUTHOR REVDAT 1 19-OCT-22 7T2P 0 JRNL AUTH F.ZHAO,Z.T.BERNDSEN,N.PEDRENO-LOPEZ,A.BURNS,J.D.ALLEN, JRNL AUTH 2 S.BARMAN,W.H.LEE,S.CHAKRABORTY,S.GNANAKARAN,L.M.SEWALL, JRNL AUTH 3 G.OZOROWSKI,O.LIMBO,G.SONG,P.YONG,S.CALLAGHAN,J.COPPOLA, JRNL AUTH 4 K.L.WEISGRAU,J.D.LIFSON,R.NEDELLEC,T.B.VOIGT,F.LAURINO, JRNL AUTH 5 J.LOUW,B.C.ROSEN,M.RICCIARDI,M.CRISPIN,R.C.DESROSIERS, JRNL AUTH 6 E.G.RAKASZ,D.I.WATKINS,R.ANDRABI,A.B.WARD,D.R.BURTON,D.SOK JRNL TITL MOLECULAR INSIGHTS INTO ANTIBODY-MEDIATED PROTECTION AGAINST JRNL TITL 2 THE PROTOTYPIC SIMIAN IMMUNODEFICIENCY VIRUS. JRNL REF NAT COMMUN V. 13 5236 2022 JRNL REFN ESSN 2041-1723 JRNL PMID 36068229 JRNL DOI 10.1038/S41467-022-32783-2 REMARK 2 REMARK 2 RESOLUTION. 3.47 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : LEGINON, GCTF, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.470 REMARK 3 NUMBER OF PARTICLES : 177365 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 7T2P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1000259758. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : SIVMAC239.K180S SOSIP TRIMER IN REMARK 245 COMPLEX WITH 3 COPIES OF K11 FAB REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 1.00 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TALOS ARCTICA REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 CYCLIC POINT SYMMETRY (SCHOENFLIES SYMBOL = C1). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, H, L, C, D, E, F, G, I, REMARK 350 AND CHAINS: J, K, M, N, O, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 408.13938 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 109.36062 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 109.36062 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 408.13938 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 CYS A 3 REMARK 465 LEU A 4 REMARK 465 GLY A 5 REMARK 465 ASN A 6 REMARK 465 GLN A 7 REMARK 465 LEU A 8 REMARK 465 LEU A 9 REMARK 465 ILE A 10 REMARK 465 ALA A 11 REMARK 465 ILE A 12 REMARK 465 LEU A 13 REMARK 465 LEU A 14 REMARK 465 LEU A 15 REMARK 465 SER A 16 REMARK 465 VAL A 17 REMARK 465 TYR A 18 REMARK 465 GLY A 19 REMARK 465 ILE A 20 REMARK 465 TYR A 21 REMARK 465 CYS A 22 REMARK 465 THR A 516 REMARK 465 THR A 517 REMARK 465 GLY A 518 REMARK 465 GLY A 519 REMARK 465 THR A 520 REMARK 465 SER A 521 REMARK 465 ARG A 522 REMARK 465 ARG A 523 REMARK 465 ARG A 524 REMARK 465 ARG A 525 REMARK 465 ARG A 526 REMARK 465 ARG A 527 REMARK 465 GLY B 528 REMARK 465 VAL B 529 REMARK 465 PHE B 530 REMARK 465 VAL B 531 REMARK 465 LEU B 532 REMARK 465 ASN B 675 REMARK 465 GLY B 676 REMARK 465 SER B 677 REMARK 465 GLY B 678 REMARK 465 HIS B 679 REMARK 465 HIS B 680 REMARK 465 HIS B 681 REMARK 465 HIS B 682 REMARK 465 HIS B 683 REMARK 465 HIS B 684 REMARK 465 HIS B 685 REMARK 465 HIS B 686 REMARK 465 ASP H -17 REMARK 465 TRP H -16 REMARK 465 THR H -15 REMARK 465 TRP H -14 REMARK 465 ARG H -13 REMARK 465 ILE H -12 REMARK 465 LEU H -11 REMARK 465 PHE H -10 REMARK 465 LEU H -9 REMARK 465 VAL H -8 REMARK 465 ALA H -7 REMARK 465 ALA H -6 REMARK 465 ALA H -5 REMARK 465 THR H -4 REMARK 465 GLY H -3 REMARK 465 ALA H -2 REMARK 465 HIS H -1 REMARK 465 SER H 0 REMARK 465 GLN H 1 REMARK 465 VAL H 2 REMARK 465 ALA H 114 REMARK 465 SER H 115 REMARK 465 THR H 116 REMARK 465 LYS H 117 REMARK 465 GLY H 118 REMARK 465 PRO H 119 REMARK 465 SER H 120 REMARK 465 VAL H 121 REMARK 465 PHE H 122 REMARK 465 PRO H 123 REMARK 465 LEU H 124 REMARK 465 ALA H 125 REMARK 465 PRO H 126 REMARK 465 SER H 127 REMARK 465 SER H 128 REMARK 465 ARG H 129 REMARK 465 SER H 130 REMARK 465 THR H 131 REMARK 465 SER H 132 REMARK 465 GLU H 133 REMARK 465 SER H 134 REMARK 465 THR H 135 REMARK 465 ALA H 136 REMARK 465 ALA H 137 REMARK 465 LEU H 138 REMARK 465 GLY H 139 REMARK 465 CYS H 140 REMARK 465 LEU H 141 REMARK 465 VAL H 142 REMARK 465 LYS H 143 REMARK 465 ASP H 144 REMARK 465 TYR H 145 REMARK 465 PHE H 146 REMARK 465 PRO H 147 REMARK 465 GLU H 148 REMARK 465 PRO H 149 REMARK 465 VAL H 150 REMARK 465 THR H 151 REMARK 465 VAL H 152 REMARK 465 SER H 153 REMARK 465 TRP H 154 REMARK 465 ASN H 155 REMARK 465 SER H 156 REMARK 465 GLY H 157 REMARK 465 SER H 158 REMARK 465 LEU H 159 REMARK 465 THR H 160 REMARK 465 SER H 161 REMARK 465 GLY H 162 REMARK 465 VAL H 163 REMARK 465 HIS H 164 REMARK 465 THR H 165 REMARK 465 PHE H 166 REMARK 465 PRO H 167 REMARK 465 ALA H 168 REMARK 465 VAL H 169 REMARK 465 LEU H 170 REMARK 465 GLN H 171 REMARK 465 SER H 172 REMARK 465 SER H 173 REMARK 465 GLY H 174 REMARK 465 LEU H 175 REMARK 465 TYR H 176 REMARK 465 SER H 177 REMARK 465 LEU H 178 REMARK 465 SER H 179 REMARK 465 SER H 180 REMARK 465 VAL H 181 REMARK 465 VAL H 182 REMARK 465 THR H 183 REMARK 465 VAL H 184 REMARK 465 PRO H 185 REMARK 465 SER H 186 REMARK 465 SER H 187 REMARK 465 SER H 188 REMARK 465 LEU H 189 REMARK 465 GLY H 190 REMARK 465 THR H 191 REMARK 465 GLN H 192 REMARK 465 THR H 193 REMARK 465 TYR H 194 REMARK 465 VAL H 195 REMARK 465 CYS H 196 REMARK 465 ASN H 197 REMARK 465 VAL H 198 REMARK 465 ASN H 199 REMARK 465 HIS H 200 REMARK 465 LYS H 201 REMARK 465 PRO H 202 REMARK 465 SER H 203 REMARK 465 ASN H 204 REMARK 465 THR H 205 REMARK 465 LYS H 206 REMARK 465 VAL H 207 REMARK 465 ASP H 208 REMARK 465 LYS H 209 REMARK 465 ARG H 210 REMARK 465 VAL H 211 REMARK 465 GLU H 212 REMARK 465 ILE H 213 REMARK 465 LYS H 214 REMARK 465 THR H 215 REMARK 465 CYS H 216 REMARK 465 GLY H 217 REMARK 465 GLY H 218 REMARK 465 GLY H 219 REMARK 465 SER H 220 REMARK 465 LYS H 221 REMARK 465 PRO H 222 REMARK 465 PRO H 223 REMARK 465 THR H 224 REMARK 465 CYS H 225 REMARK 465 PRO H 226 REMARK 465 PRO H 227 REMARK 465 CYS H 228 REMARK 465 THR H 229 REMARK 465 SER H 230 REMARK 465 PRO H 231 REMARK 465 GLU H 232 REMARK 465 LEU H 233 REMARK 465 LEU H 234 REMARK 465 GLY H 235 REMARK 465 GLY H 236 REMARK 465 PRO H 237 REMARK 465 SER H 238 REMARK 465 VAL H 239 REMARK 465 PHE H 240 REMARK 465 LEU H 241 REMARK 465 PHE H 242 REMARK 465 PRO H 243 REMARK 465 PRO H 244 REMARK 465 LYS H 245 REMARK 465 PRO H 246 REMARK 465 LYS H 247 REMARK 465 ASP H 248 REMARK 465 THR H 249 REMARK 465 LEU H 250 REMARK 465 MET H 251 REMARK 465 ILE H 252 REMARK 465 SER H 253 REMARK 465 ARG H 254 REMARK 465 THR H 255 REMARK 465 PRO H 256 REMARK 465 GLU H 257 REMARK 465 VAL H 258 REMARK 465 THR H 259 REMARK 465 CYS H 260 REMARK 465 VAL H 261 REMARK 465 VAL H 262 REMARK 465 VAL H 263 REMARK 465 ASP H 264 REMARK 465 VAL H 265 REMARK 465 SER H 266 REMARK 465 GLN H 267 REMARK 465 GLU H 268 REMARK 465 ASP H 269 REMARK 465 PRO H 270 REMARK 465 ASP H 271 REMARK 465 VAL H 272 REMARK 465 LYS H 273 REMARK 465 PHE H 274 REMARK 465 ASN H 275 REMARK 465 TRP H 276 REMARK 465 TYR H 277 REMARK 465 VAL H 278 REMARK 465 ASN H 279 REMARK 465 GLY H 280 REMARK 465 ALA H 281 REMARK 465 GLU H 282 REMARK 465 VAL H 283 REMARK 465 HIS H 284 REMARK 465 HIS H 285 REMARK 465 ALA H 286 REMARK 465 GLN H 287 REMARK 465 THR H 288 REMARK 465 LYS H 289 REMARK 465 PRO H 290 REMARK 465 ARG H 291 REMARK 465 GLU H 292 REMARK 465 THR H 293 REMARK 465 GLN H 294 REMARK 465 TYR H 295 REMARK 465 ASN H 296 REMARK 465 SER H 297 REMARK 465 THR H 298 REMARK 465 TYR H 299 REMARK 465 ARG H 300 REMARK 465 VAL H 301 REMARK 465 VAL H 302 REMARK 465 SER H 303 REMARK 465 VAL H 304 REMARK 465 LEU H 305 REMARK 465 THR H 306 REMARK 465 VAL H 307 REMARK 465 THR H 308 REMARK 465 HIS H 309 REMARK 465 GLN H 310 REMARK 465 ASP H 311 REMARK 465 TRP H 312 REMARK 465 LEU H 313 REMARK 465 ASN H 314 REMARK 465 GLY H 315 REMARK 465 LYS H 316 REMARK 465 GLU H 317 REMARK 465 TYR H 318 REMARK 465 THR H 319 REMARK 465 CYS H 320 REMARK 465 LYS H 321 REMARK 465 VAL H 322 REMARK 465 SER H 323 REMARK 465 ASN H 324 REMARK 465 LYS H 325 REMARK 465 ALA H 326 REMARK 465 LEU H 327 REMARK 465 PRO H 328 REMARK 465 ALA H 329 REMARK 465 PRO H 330 REMARK 465 ILE H 331 REMARK 465 GLN H 332 REMARK 465 LYS H 333 REMARK 465 THR H 334 REMARK 465 ILE H 335 REMARK 465 SER H 336 REMARK 465 LYS H 337 REMARK 465 ASP H 338 REMARK 465 LYS H 339 REMARK 465 GLY H 340 REMARK 465 GLN H 341 REMARK 465 PRO H 342 REMARK 465 ARG H 343 REMARK 465 GLU H 344 REMARK 465 PRO H 345 REMARK 465 GLN H 346 REMARK 465 VAL H 347 REMARK 465 TYR H 348 REMARK 465 THR H 349 REMARK 465 LEU H 350 REMARK 465 PRO H 351 REMARK 465 PRO H 352 REMARK 465 SER H 353 REMARK 465 ARG H 354 REMARK 465 GLU H 355 REMARK 465 GLU H 356 REMARK 465 LEU H 357 REMARK 465 THR H 358 REMARK 465 LYS H 359 REMARK 465 ASN H 360 REMARK 465 GLN H 361 REMARK 465 VAL H 362 REMARK 465 SER H 363 REMARK 465 LEU H 364 REMARK 465 THR H 365 REMARK 465 CYS H 366 REMARK 465 LEU H 367 REMARK 465 VAL H 368 REMARK 465 LYS H 369 REMARK 465 GLY H 370 REMARK 465 PHE H 371 REMARK 465 TYR H 372 REMARK 465 PRO H 373 REMARK 465 SER H 374 REMARK 465 ASP H 375 REMARK 465 ILE H 376 REMARK 465 VAL H 377 REMARK 465 VAL H 378 REMARK 465 GLU H 379 REMARK 465 TRP H 380 REMARK 465 GLU H 381 REMARK 465 SER H 382 REMARK 465 SER H 383 REMARK 465 GLY H 384 REMARK 465 GLN H 385 REMARK 465 PRO H 386 REMARK 465 GLU H 387 REMARK 465 ASN H 388 REMARK 465 THR H 389 REMARK 465 TYR H 390 REMARK 465 LYS H 391 REMARK 465 THR H 392 REMARK 465 THR H 393 REMARK 465 PRO H 394 REMARK 465 PRO H 395 REMARK 465 VAL H 396 REMARK 465 LEU H 397 REMARK 465 ASP H 398 REMARK 465 SER H 399 REMARK 465 ASP H 400 REMARK 465 GLY H 401 REMARK 465 SER H 402 REMARK 465 TYR H 403 REMARK 465 PHE H 404 REMARK 465 LEU H 405 REMARK 465 TYR H 406 REMARK 465 SER H 407 REMARK 465 LYS H 408 REMARK 465 LEU H 409 REMARK 465 THR H 410 REMARK 465 VAL H 411 REMARK 465 ASP H 412 REMARK 465 LYS H 413 REMARK 465 SER H 414 REMARK 465 ARG H 415 REMARK 465 TRP H 416 REMARK 465 GLN H 417 REMARK 465 GLN H 418 REMARK 465 GLY H 419 REMARK 465 ASN H 420 REMARK 465 VAL H 421 REMARK 465 PHE H 422 REMARK 465 SER H 423 REMARK 465 CYS H 424 REMARK 465 SER H 425 REMARK 465 VAL H 426 REMARK 465 MET H 427 REMARK 465 HIS H 428 REMARK 465 GLU H 429 REMARK 465 ALA H 430 REMARK 465 LEU H 431 REMARK 465 HIS H 432 REMARK 465 ASN H 433 REMARK 465 HIS H 434 REMARK 465 TYR H 435 REMARK 465 THR H 436 REMARK 465 GLN H 437 REMARK 465 LYS H 438 REMARK 465 SER H 439 REMARK 465 LEU H 440 REMARK 465 SER H 441 REMARK 465 LEU H 442 REMARK 465 SER H 443 REMARK 465 PRO H 444 REMARK 465 GLY H 445 REMARK 465 LYS H 446 REMARK 465 GLU L -18 REMARK 465 THR L -17 REMARK 465 ASP L -16 REMARK 465 THR L -15 REMARK 465 LEU L -14 REMARK 465 LEU L -13 REMARK 465 LEU L -12 REMARK 465 TRP L -11 REMARK 465 VAL L -10 REMARK 465 LEU L -9 REMARK 465 LEU L -8 REMARK 465 LEU L -7 REMARK 465 TRP L -6 REMARK 465 VAL L -5 REMARK 465 PRO L -4 REMARK 465 GLY L -3 REMARK 465 SER L -2 REMARK 465 THR L -1 REMARK 465 GLY L 0 REMARK 465 ARG L 108 REMARK 465 THR L 109 REMARK 465 VAL L 110 REMARK 465 ALA L 111 REMARK 465 ALA L 112 REMARK 465 PRO L 113 REMARK 465 SER L 114 REMARK 465 VAL L 115 REMARK 465 PHE L 116 REMARK 465 ILE L 117 REMARK 465 PHE L 118 REMARK 465 PRO L 119 REMARK 465 PRO L 120 REMARK 465 SER L 121 REMARK 465 GLU L 122 REMARK 465 ASP L 123 REMARK 465 GLN L 124 REMARK 465 VAL L 125 REMARK 465 LYS L 126 REMARK 465 SER L 127 REMARK 465 GLY L 128 REMARK 465 THR L 129 REMARK 465 VAL L 130 REMARK 465 SER L 131 REMARK 465 VAL L 132 REMARK 465 VAL L 133 REMARK 465 CYS L 134 REMARK 465 LEU L 135 REMARK 465 LEU L 136 REMARK 465 ASN L 137 REMARK 465 ASN L 138 REMARK 465 PHE L 139 REMARK 465 TYR L 140 REMARK 465 PRO L 141 REMARK 465 ARG L 142 REMARK 465 GLU L 143 REMARK 465 ALA L 144 REMARK 465 SER L 145 REMARK 465 VAL L 146 REMARK 465 LYS L 147 REMARK 465 TRP L 148 REMARK 465 LYS L 149 REMARK 465 VAL L 150 REMARK 465 ASP L 151 REMARK 465 GLY L 152 REMARK 465 ALA L 153 REMARK 465 LEU L 154 REMARK 465 LYS L 155 REMARK 465 THR L 156 REMARK 465 GLY L 157 REMARK 465 ASN L 158 REMARK 465 SER L 159 REMARK 465 GLN L 160 REMARK 465 GLU L 161 REMARK 465 SER L 162 REMARK 465 VAL L 163 REMARK 465 THR L 164 REMARK 465 GLU L 165 REMARK 465 GLN L 166 REMARK 465 ASP L 167 REMARK 465 SER L 168 REMARK 465 LYS L 169 REMARK 465 ASP L 170 REMARK 465 ASN L 171 REMARK 465 THR L 172 REMARK 465 TYR L 173 REMARK 465 SER L 174 REMARK 465 LEU L 175 REMARK 465 SER L 176 REMARK 465 SER L 177 REMARK 465 THR L 178 REMARK 465 LEU L 179 REMARK 465 THR L 180 REMARK 465 LEU L 181 REMARK 465 SER L 182 REMARK 465 SER L 183 REMARK 465 THR L 184 REMARK 465 GLU L 185 REMARK 465 TYR L 186 REMARK 465 GLN L 187 REMARK 465 SER L 188 REMARK 465 HIS L 189 REMARK 465 LYS L 190 REMARK 465 VAL L 191 REMARK 465 TYR L 192 REMARK 465 ALA L 193 REMARK 465 CYS L 194 REMARK 465 GLU L 195 REMARK 465 VAL L 196 REMARK 465 THR L 197 REMARK 465 HIS L 198 REMARK 465 GLN L 199 REMARK 465 GLY L 200 REMARK 465 LEU L 201 REMARK 465 SER L 202 REMARK 465 SER L 203 REMARK 465 PRO L 204 REMARK 465 VAL L 205 REMARK 465 THR L 206 REMARK 465 LYS L 207 REMARK 465 SER L 208 REMARK 465 PHE L 209 REMARK 465 ASN L 210 REMARK 465 ARG L 211 REMARK 465 GLY L 212 REMARK 465 GLU L 213 REMARK 465 CYS L 214 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 CYS B 613 SG REMARK 470 CYS H 33 SG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C ILE H 51 N TYR H 52A 1.33 REMARK 500 C SER H 52 N ASP H 53 1.33 REMARK 500 SG CYS A 108 SG CYS A 211 1.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 57 CB CYS A 57 SG -0.109 REMARK 500 GLU A 185 CD GLU A 185 OE1 -0.077 REMARK 500 TYR A 232 CB TYR A 232 CG -0.094 REMARK 500 TRP A 350 CB TRP A 350 CG -0.137 REMARK 500 GLU A 356 CD GLU A 356 OE2 -0.070 REMARK 500 TYR A 515 CB TYR A 515 CG 0.092 REMARK 500 TYR A 515 CG TYR A 515 CD2 0.098 REMARK 500 TYR A 515 CG TYR A 515 CD1 0.105 REMARK 500 TYR A 515 CE1 TYR A 515 CZ 0.093 REMARK 500 TYR A 515 CZ TYR A 515 CE2 0.085 REMARK 500 CYS H 92 CB CYS H 92 SG -0.154 REMARK 500 CYS L 88 CB CYS L 88 SG -0.107 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 312 NE - CZ - NH2 ANGL. DEV. = -5.1 DEGREES REMARK 500 ARG A 427 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ARG H 13 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG H 66 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG H 66 NE - CZ - NH2 ANGL. DEV. = -4.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 27 170.85 53.43 REMARK 500 THR A 51 -85.39 -132.23 REMARK 500 THR A 130 57.70 18.08 REMARK 500 GLN A 164 84.50 66.68 REMARK 500 ARG A 177 -56.50 62.59 REMARK 500 CYS A 194 113.18 64.65 REMARK 500 GLU A 203 79.13 59.25 REMARK 500 ASN A 212 -41.87 134.13 REMARK 500 TRP A 274 -63.77 67.22 REMARK 500 MET A 325 -58.09 32.28 REMARK 500 THR A 416 -73.05 -72.23 REMARK 500 ALA A 417 -56.47 65.68 REMARK 500 LYS A 420 128.60 71.72 REMARK 500 GLN A 477 106.57 81.70 REMARK 500 ASN A 479 101.40 35.67 REMARK 500 LEU A 494 -117.18 -117.01 REMARK 500 PRO A 504 46.48 -79.32 REMARK 500 CYS A 512 34.72 -168.92 REMARK 500 PHE B 534 -48.03 -177.73 REMARK 500 ALA B 544 159.78 84.22 REMARK 500 SER B 549 107.42 78.31 REMARK 500 CYS B 613 51.99 -91.73 REMARK 500 GLN B 617 -67.19 61.30 REMARK 500 CYS B 619 -38.95 68.02 REMARK 500 SER H 7 143.61 -172.70 REMARK 500 SER L 31 -0.14 -174.37 REMARK 500 ALA L 51 -59.78 68.29 REMARK 500 PHE L 94 82.53 16.19 REMARK 500 PHE L 98 150.75 62.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-25621 RELATED DB: EMDB REMARK 900 THE ENVELOPE GLYCOPROTEIN SIVMAC239.K180S SOSIP TRIMER IN COMPLEX REMARK 900 WITH 3 COPIES OF THE NEUTRALIZING ANTIBODY K11 DBREF1 7T2P A 1 525 UNP A0A5C0E975_SIV DBREF2 7T2P A A0A5C0E975 1 525 DBREF 7T2P B 528 675 UNP L7XFX7 L7XFX7_SIV 515 662 DBREF 7T2P H -17 446 PDB 7T2P 7T2P -17 446 DBREF 7T2P L -18 214 PDB 7T2P 7T2P -18 214 SEQADV 7T2P SER A 180 UNP A0A5C0E97 LYS 180 ENGINEERED MUTATION SEQADV 7T2P SER A 511 UNP A0A5C0E97 ASP 511 CONFLICT SEQADV 7T2P CYS A 512 UNP A0A5C0E97 VAL 512 CONFLICT SEQADV 7T2P ARG A 523 UNP A0A5C0E97 ASN 523 CONFLICT SEQADV 7T2P ARG A 526 UNP A0A5C0E97 EXPRESSION TAG SEQADV 7T2P ARG A 527 UNP A0A5C0E97 EXPRESSION TAG SEQADV 7T2P PRO B 574 UNP L7XFX7 VAL 561 CONFLICT SEQADV 7T2P CYS B 620 UNP L7XFX7 HIS 607 CONFLICT SEQADV 7T2P GLY B 676 UNP L7XFX7 EXPRESSION TAG SEQADV 7T2P SER B 677 UNP L7XFX7 EXPRESSION TAG SEQADV 7T2P GLY B 678 UNP L7XFX7 EXPRESSION TAG SEQADV 7T2P HIS B 679 UNP L7XFX7 EXPRESSION TAG SEQADV 7T2P HIS B 680 UNP L7XFX7 EXPRESSION TAG SEQADV 7T2P HIS B 681 UNP L7XFX7 EXPRESSION TAG SEQADV 7T2P HIS B 682 UNP L7XFX7 EXPRESSION TAG SEQADV 7T2P HIS B 683 UNP L7XFX7 EXPRESSION TAG SEQADV 7T2P HIS B 684 UNP L7XFX7 EXPRESSION TAG SEQADV 7T2P HIS B 685 UNP L7XFX7 EXPRESSION TAG SEQADV 7T2P HIS B 686 UNP L7XFX7 EXPRESSION TAG SEQRES 1 A 527 MET GLY CYS LEU GLY ASN GLN LEU LEU ILE ALA ILE LEU SEQRES 2 A 527 LEU LEU SER VAL TYR GLY ILE TYR CYS THR LEU TYR VAL SEQRES 3 A 527 THR VAL PHE TYR GLY VAL PRO ALA TRP ARG ASN ALA THR SEQRES 4 A 527 ILE PRO LEU PHE CYS ALA THR LYS ASN ARG ASP THR TRP SEQRES 5 A 527 GLY THR THR GLN CYS LEU PRO ASP ASN GLY ASP TYR SER SEQRES 6 A 527 GLU MET ALA LEU ASN VAL THR GLU SER PHE ASP ALA TRP SEQRES 7 A 527 ASN ASN THR VAL THR GLU GLN ALA ILE GLU ASP VAL TRP SEQRES 8 A 527 GLN LEU PHE GLU THR SER ILE LYS PRO CYS VAL LYS LEU SEQRES 9 A 527 SER PRO LEU CYS ILE THR MET ARG CYS ASN LYS SER GLU SEQRES 10 A 527 THR ASP ARG TRP GLY LEU THR LYS SER ILE THR THR THR SEQRES 11 A 527 ALA SER THR THR SER THR THR ALA SER ALA LYS VAL ASP SEQRES 12 A 527 MET VAL ASN GLU THR SER SER CYS ILE ALA GLN ASP ASN SEQRES 13 A 527 CYS THR GLY LEU GLU GLN GLU GLN MET ILE SER CYS LYS SEQRES 14 A 527 PHE ASN MET THR GLY LEU LYS ARG ASP LYS SER LYS GLU SEQRES 15 A 527 TYR ASN GLU THR TRP TYR SER ALA ASP LEU VAL CYS GLU SEQRES 16 A 527 GLN GLY ASN ASN THR GLY ASN GLU SER ARG CYS TYR MET SEQRES 17 A 527 ASN HIS CYS ASN THR SER VAL ILE GLN GLU SER CYS ASP SEQRES 18 A 527 LYS HIS TYR TRP ASP ALA ILE ARG PHE ARG TYR CYS ALA SEQRES 19 A 527 PRO PRO GLY TYR ALA LEU LEU ARG CYS ASN ASP THR ASN SEQRES 20 A 527 TYR SER GLY PHE MET PRO LYS CYS SER LYS VAL VAL VAL SEQRES 21 A 527 SER SER CYS THR ARG MET MET GLU THR GLN THR SER THR SEQRES 22 A 527 TRP PHE GLY PHE ASN GLY THR ARG ALA GLU ASN ARG THR SEQRES 23 A 527 TYR ILE TYR TRP HIS GLY ARG ASP ASN ARG THR ILE ILE SEQRES 24 A 527 SER LEU ASN LYS TYR TYR ASN LEU THR MET LYS CYS ARG SEQRES 25 A 527 ARG PRO GLY ASN LYS THR VAL LEU PRO VAL THR ILE MET SEQRES 26 A 527 SER GLY LEU VAL PHE HIS SER GLN PRO ILE ASN ASP ARG SEQRES 27 A 527 PRO LYS GLN ALA TRP CYS TRP PHE GLY GLY LYS TRP LYS SEQRES 28 A 527 ASP ALA ILE LYS GLU VAL LYS GLN THR ILE VAL LYS HIS SEQRES 29 A 527 PRO ARG TYR THR GLY THR ASN ASN THR ASP LYS ILE ASN SEQRES 30 A 527 LEU THR ALA PRO GLY GLY GLY ASP PRO GLU VAL THR PHE SEQRES 31 A 527 MET TRP THR ASN CYS ARG GLY GLU PHE LEU TYR CYS LYS SEQRES 32 A 527 MET ASN TRP PHE LEU ASN TRP VAL GLU ASP ARG ASN THR SEQRES 33 A 527 ALA ASN GLN LYS PRO LYS GLU GLN HIS LYS ARG ASN TYR SEQRES 34 A 527 VAL PRO CYS HIS ILE ARG GLN ILE ILE ASN THR TRP HIS SEQRES 35 A 527 LYS VAL GLY LYS ASN VAL TYR LEU PRO PRO ARG GLU GLY SEQRES 36 A 527 ASP LEU THR CYS ASN SER THR VAL THR SER LEU ILE ALA SEQRES 37 A 527 ASN ILE ASP TRP ILE ASP GLY ASN GLN THR ASN ILE THR SEQRES 38 A 527 MET SER ALA GLU VAL ALA GLU LEU TYR ARG LEU GLU LEU SEQRES 39 A 527 GLY ASP TYR LYS LEU VAL GLU ILE THR PRO ILE GLY LEU SEQRES 40 A 527 ALA PRO THR SER CYS LYS ARG TYR THR THR GLY GLY THR SEQRES 41 A 527 SER ARG ARG ARG ARG ARG ARG SEQRES 1 B 159 GLY VAL PHE VAL LEU GLY PHE LEU GLY PHE LEU ALA THR SEQRES 2 B 159 ALA GLY SER ALA MET GLY ALA ALA SER LEU THR LEU THR SEQRES 3 B 159 ALA GLN SER ARG THR LEU LEU ALA GLY ILE VAL GLN GLN SEQRES 4 B 159 GLN GLN GLN LEU LEU ASP VAL PRO LYS ARG GLN GLN GLU SEQRES 5 B 159 LEU LEU ARG LEU THR VAL TRP GLY THR LYS ASN LEU GLN SEQRES 6 B 159 THR ARG VAL THR ALA ILE GLU LYS TYR LEU LYS ASP GLN SEQRES 7 B 159 ALA GLN LEU ASN ALA TRP GLY CYS ALA PHE ARG GLN VAL SEQRES 8 B 159 CYS CYS THR THR VAL PRO TRP PRO ASN ALA SER LEU ILE SEQRES 9 B 159 PRO LYS TRP ASN ASN GLU THR TRP GLN GLU TRP GLU ARG SEQRES 10 B 159 LYS VAL ASP PHE LEU GLU GLU ASN ILE THR ALA LEU LEU SEQRES 11 B 159 GLU GLU ALA GLN ILE GLN GLN GLU LYS ASN MET TYR GLU SEQRES 12 B 159 LEU GLN LYS LEU ASN GLY SER GLY HIS HIS HIS HIS HIS SEQRES 13 B 159 HIS HIS HIS SEQRES 1 H 485 ASP TRP THR TRP ARG ILE LEU PHE LEU VAL ALA ALA ALA SEQRES 2 H 485 THR GLY ALA HIS SER GLN VAL GLN LEU GLN GLU SER GLY SEQRES 3 H 485 PRO GLY VAL VAL ARG PRO SER GLN THR LEU SER LEU THR SEQRES 4 H 485 CYS ALA VAL SER GLY ASP THR VAL SER SER CYS CYS PHE SEQRES 5 H 485 PHE TRP THR TRP ILE ARG GLN PRO PRO GLY LYS GLY LEU SEQRES 6 H 485 GLU TRP ILE GLY ASN ILE SER TYR ASP ASN ASP ASN THR SEQRES 7 H 485 ASN TYR ASN PRO SER LEU LYS THR ARG ILE SER ILE SER SEQRES 8 H 485 LYS ASP MET SER LYS ASN GLN PHE SER LEU LYS LEU ASN SEQRES 9 H 485 SER LEU THR ALA THR ASP THR ALA ILE TYR TYR CYS ALA SEQRES 10 H 485 ARG GLU SER PRO SER ARG GLY ASN PHE CYS TYR ALA TYR SEQRES 11 H 485 LEU TYR GLY ASN CYS PRO LEU HIS PHE ASP LEU TRP GLY SEQRES 12 H 485 GLN GLY VAL LEU VAL THR VAL SER SER ALA SER THR LYS SEQRES 13 H 485 GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER ARG SER SEQRES 14 H 485 THR SER GLU SER THR ALA ALA LEU GLY CYS LEU VAL LYS SEQRES 15 H 485 ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER SEQRES 16 H 485 GLY SER LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL SEQRES 17 H 485 LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL SEQRES 18 H 485 THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR VAL SEQRES 19 H 485 CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP SEQRES 20 H 485 LYS ARG VAL GLU ILE LYS THR CYS GLY GLY GLY SER LYS SEQRES 21 H 485 PRO PRO THR CYS PRO PRO CYS THR SER PRO GLU LEU LEU SEQRES 22 H 485 GLY GLY PRO SER VAL PHE LEU PHE PRO PRO LYS PRO LYS SEQRES 23 H 485 ASP THR LEU MET ILE SER ARG THR PRO GLU VAL THR CYS SEQRES 24 H 485 VAL VAL VAL ASP VAL SER GLN GLU ASP PRO ASP VAL LYS SEQRES 25 H 485 PHE ASN TRP TYR VAL ASN GLY ALA GLU VAL HIS HIS ALA SEQRES 26 H 485 GLN THR LYS PRO ARG GLU THR GLN TYR ASN SER THR TYR SEQRES 27 H 485 ARG VAL VAL SER VAL LEU THR VAL THR HIS GLN ASP TRP SEQRES 28 H 485 LEU ASN GLY LYS GLU TYR THR CYS LYS VAL SER ASN LYS SEQRES 29 H 485 ALA LEU PRO ALA PRO ILE GLN LYS THR ILE SER LYS ASP SEQRES 30 H 485 LYS GLY GLN PRO ARG GLU PRO GLN VAL TYR THR LEU PRO SEQRES 31 H 485 PRO SER ARG GLU GLU LEU THR LYS ASN GLN VAL SER LEU SEQRES 32 H 485 THR CYS LEU VAL LYS GLY PHE TYR PRO SER ASP ILE VAL SEQRES 33 H 485 VAL GLU TRP GLU SER SER GLY GLN PRO GLU ASN THR TYR SEQRES 34 H 485 LYS THR THR PRO PRO VAL LEU ASP SER ASP GLY SER TYR SEQRES 35 H 485 PHE LEU TYR SER LYS LEU THR VAL ASP LYS SER ARG TRP SEQRES 36 H 485 GLN GLN GLY ASN VAL PHE SER CYS SER VAL MET HIS GLU SEQRES 37 H 485 ALA LEU HIS ASN HIS TYR THR GLN LYS SER LEU SER LEU SEQRES 38 H 485 SER PRO GLY LYS SEQRES 1 L 232 GLU THR ASP THR LEU LEU LEU TRP VAL LEU LEU LEU TRP SEQRES 2 L 232 VAL PRO GLY SER THR GLY ASP ILE LEU LEU THR GLN SER SEQRES 3 L 232 PRO SER SER LEU SER GLY SER VAL GLY ASP ARG VAL THR SEQRES 4 L 232 ILE THR CYS ARG ALA SER GLN GLY ILE ASN SER TYR LEU SEQRES 5 L 232 ASN TRP TYR GLN GLN LYS PRO GLY LYS ALA PRO LYS LEU SEQRES 6 L 232 LEU ILE TYR PHE ALA ASN ARG LEU GLN SER GLY VAL PRO SEQRES 7 L 232 SER ARG PHE SER GLY SER GLY SER GLY THR GLU PHE THR SEQRES 8 L 232 LEU THR ILE SER SER LEU GLN SER GLU ASP GLY ALA THR SEQRES 9 L 232 TYR TYR CYS GLN GLN TYR ASP THR PHE PRO THR PHE GLY SEQRES 10 L 232 PRO GLY THR LYS LEU ASP ILE LYS ARG THR VAL ALA ALA SEQRES 11 L 232 PRO SER VAL PHE ILE PHE PRO PRO SER GLU ASP GLN VAL SEQRES 12 L 232 LYS SER GLY THR VAL SER VAL VAL CYS LEU LEU ASN ASN SEQRES 13 L 232 PHE TYR PRO ARG GLU ALA SER VAL LYS TRP LYS VAL ASP SEQRES 14 L 232 GLY ALA LEU LYS THR GLY ASN SER GLN GLU SER VAL THR SEQRES 15 L 232 GLU GLN ASP SER LYS ASP ASN THR TYR SER LEU SER SER SEQRES 16 L 232 THR LEU THR LEU SER SER THR GLU TYR GLN SER HIS LYS SEQRES 17 L 232 VAL TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER SEQRES 18 L 232 PRO VAL THR LYS SER PHE ASN ARG GLY GLU CYS HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET MAN C 5 11 HET MAN C 6 11 HET MAN C 7 11 HET MAN C 8 11 HET NAG D 1 14 HET NAG D 2 14 HET NAG E 1 14 HET NAG E 2 14 HET FUC E 3 10 HET NAG F 1 14 HET NAG F 2 14 HET FUC F 3 10 HET NAG G 1 14 HET NAG G 2 14 HET FUC G 3 10 HET NAG I 1 14 HET NAG I 2 14 HET BMA I 3 11 HET MAN I 4 11 HET MAN I 5 11 HET MAN I 6 11 HET NAG J 1 14 HET NAG J 2 14 HET BMA J 3 11 HET MAN J 4 11 HET MAN J 5 11 HET NAG K 1 14 HET NAG K 2 14 HET NAG M 1 14 HET NAG M 2 14 HET NAG N 1 14 HET NAG N 2 14 HET BMA N 3 11 HET NAG O 1 14 HET NAG O 2 14 HET NAG P 1 14 HET NAG P 2 14 HET NAG A 601 14 HET NAG A 602 14 HET NAG A 603 14 HET NAG A 604 14 HET NAG A 605 14 HET NAG A 606 14 HET NAG A 607 14 HET NAG A 608 14 HET NAG A 609 14 HET NAG A 610 14 HET NAG B 701 14 HET NAG B 702 14 HET NAG B 703 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 5 NAG 37(C8 H15 N O6) FORMUL 5 BMA 4(C6 H12 O6) FORMUL 5 MAN 10(C6 H12 O6) FORMUL 7 FUC 3(C6 H12 O5) HELIX 1 AA1 THR A 51 CYS A 57 1 7 HELIX 2 AA2 THR A 81 LYS A 99 1 19 HELIX 3 AA3 LEU A 104 CYS A 108 5 5 HELIX 4 AA4 ASN A 114 TRP A 121 1 8 HELIX 5 AA5 SER A 149 GLN A 154 1 6 HELIX 6 AA6 ALA A 190 LEU A 192 5 3 HELIX 7 AA7 ASN A 302 ASN A 306 5 5 HELIX 8 AA8 LYS A 349 LYS A 363 1 15 HELIX 9 AA9 ASN A 372 ILE A 376 5 5 HELIX 10 AB1 ASP A 385 PHE A 390 1 6 HELIX 11 AB2 MET A 404 GLU A 412 1 9 HELIX 12 AB3 LYS A 420 GLN A 424 5 5 HELIX 13 AB4 GLU A 485 GLU A 488 5 4 HELIX 14 AB5 LEU A 489 LEU A 494 1 6 HELIX 15 AB6 PHE B 537 ALA B 541 5 5 HELIX 16 AB7 THR B 553 VAL B 573 1 21 HELIX 17 AB8 PRO B 574 ARG B 576 5 3 HELIX 18 AB9 VAL B 585 GLY B 612 1 28 HELIX 19 AC1 THR B 638 ARG B 644 1 7 HELIX 20 AC2 VAL B 646 LEU B 674 1 29 HELIX 21 AC3 PRO H 61 LYS H 64 5 4 HELIX 22 AC4 THR H 83 THR H 87 5 5 SHEET 1 AA1 2 PHE A 29 TYR A 30 0 SHEET 2 AA1 2 ILE A 505 GLY A 506 -1 O GLY A 506 N PHE A 29 SHEET 1 AA2 5 TRP A 35 ASN A 37 0 SHEET 2 AA2 5 TYR A 497 ILE A 502 -1 O GLU A 501 N ARG A 36 SHEET 3 AA2 5 TYR A 238 CYS A 243 -1 N LEU A 241 O LYS A 498 SHEET 4 AA2 5 VAL A 258 SER A 261 -1 O SER A 261 N LEU A 240 SHEET 5 AA2 5 MET A 67 LEU A 69 -1 N MET A 67 O VAL A 260 SHEET 1 AA3 4 LEU A 58 PRO A 59 0 SHEET 2 AA3 4 PHE A 43 THR A 46 1 N CYS A 44 O LEU A 58 SHEET 3 AA3 4 ARG A 229 CYS A 233 -1 O CYS A 233 N PHE A 43 SHEET 4 AA3 4 MET A 267 GLU A 268 -1 O MET A 267 N PHE A 230 SHEET 1 AA4 2 GLU A 73 PHE A 75 0 SHEET 2 AA4 2 MET A 252 CYS A 255 -1 O CYS A 255 N GLU A 73 SHEET 1 AA5 4 SER A 180 TYR A 188 0 SHEET 2 AA5 4 MET A 165 THR A 173 -1 N PHE A 170 O TYR A 183 SHEET 3 AA5 4 MET A 111 CYS A 113 -1 N ARG A 112 O LYS A 169 SHEET 4 AA5 4 SER A 204 CYS A 206 -1 O CYS A 206 N MET A 111 SHEET 1 AA6 2 VAL A 142 ASP A 143 0 SHEET 2 AA6 2 LYS A 426 ARG A 427 1 O LYS A 426 N ASP A 143 SHEET 1 AA7 3 GLN A 217 GLU A 218 0 SHEET 2 AA7 3 ASN A 447 TYR A 449 1 O TYR A 449 N GLN A 217 SHEET 3 AA7 3 ILE A 437 ASN A 439 -1 N ILE A 438 O VAL A 448 SHEET 1 AA8 4 PHE A 275 PHE A 277 0 SHEET 2 AA8 4 GLY A 455 ILE A 470 -1 O SER A 465 N GLY A 276 SHEET 3 AA8 4 ILE A 480 MET A 482 -1 O THR A 481 N ASN A 469 SHEET 4 AA8 4 LEU A 378 THR A 379 1 N THR A 379 O MET A 482 SHEET 1 AA9 8 ILE A 288 TRP A 290 0 SHEET 2 AA9 8 ARG A 296 SER A 300 -1 O ILE A 298 N TYR A 289 SHEET 3 AA9 8 GLY A 455 ILE A 470 -1 O LEU A 466 N ILE A 299 SHEET 4 AA9 8 THR A 308 LYS A 317 -1 N ARG A 313 O LEU A 457 SHEET 5 AA9 8 TRP A 343 GLY A 347 -1 O TRP A 345 N LYS A 310 SHEET 6 AA9 8 TYR A 429 ARG A 435 -1 O VAL A 430 N CYS A 344 SHEET 7 AA9 8 GLU A 398 CYS A 402 -1 N TYR A 401 O HIS A 433 SHEET 8 AA9 8 MET A 391 CYS A 395 -1 N THR A 393 O LEU A 400 SHEET 1 AB1 2 LEU A 320 THR A 323 0 SHEET 2 AB1 2 VAL A 329 SER A 332 -1 O PHE A 330 N VAL A 322 SHEET 1 AB2 4 LEU H 4 GLN H 5 0 SHEET 2 AB2 4 LEU H 18 VAL H 24 -1 O ALA H 23 N GLN H 5 SHEET 3 AB2 4 GLN H 77 LEU H 82 -1 O PHE H 78 N CYS H 22 SHEET 4 AB2 4 ILE H 67 ASP H 72 -1 N ASP H 72 O GLN H 77 SHEET 1 AB3 6 VAL H 11 VAL H 12 0 SHEET 2 AB3 6 VAL H 107 VAL H 111 1 O THR H 110 N VAL H 12 SHEET 3 AB3 6 ALA H 88 ALA H 93 -1 N TYR H 90 O VAL H 107 SHEET 4 AB3 6 TRP H 35A GLN H 39 -1 N THR H 35B O ALA H 93 SHEET 5 AB3 6 GLU H 46 ILE H 51 -1 O ILE H 51 N TRP H 35A SHEET 6 AB3 6 ASN H 58 TYR H 59 -1 O ASN H 58 N ASN H 50 SHEET 1 AB4 2 SER H 96 PRO H 97 0 SHEET 2 AB4 2 LEU H 100M HIS H 100N-1 O HIS H 100N N SER H 96 SHEET 1 AB5 3 LEU L 4 SER L 7 0 SHEET 2 AB5 3 VAL L 19 ILE L 29 -1 O ARG L 24 N THR L 5 SHEET 3 AB5 3 PHE L 62 ILE L 75 -1 O PHE L 71 N CYS L 23 SHEET 1 AB6 6 SER L 10 GLY L 13 0 SHEET 2 AB6 6 THR L 102 ILE L 106 1 O LYS L 103 N LEU L 11 SHEET 3 AB6 6 ALA L 84 GLN L 90 -1 N TYR L 86 O THR L 102 SHEET 4 AB6 6 LEU L 33 GLN L 38 -1 N GLN L 38 O THR L 85 SHEET 5 AB6 6 LYS L 45 TYR L 49 -1 O LEU L 47 N TRP L 35 SHEET 6 AB6 6 ARG L 53 LEU L 54 -1 O ARG L 53 N TYR L 49 SSBOND 1 CYS A 101 CYS A 220 1555 1555 2.03 SSBOND 2 CYS A 113 CYS A 168 1555 1555 2.02 SSBOND 3 CYS A 194 CYS A 206 1555 1555 2.03 SSBOND 4 CYS A 233 CYS A 263 1555 1555 2.04 SSBOND 5 CYS A 243 CYS A 255 1555 1555 2.05 SSBOND 6 CYS A 311 CYS A 344 1555 1555 2.03 SSBOND 7 CYS A 395 CYS A 459 1555 1555 2.03 SSBOND 8 CYS A 402 CYS A 432 1555 1555 2.02 SSBOND 9 CYS H 100C CYS H 100K 1555 1555 2.03 SSBOND 10 CYS L 23 CYS L 88 1555 1555 2.02 LINK ND2 ASN A 37 C1 NAG C 1 1555 1555 1.52 LINK ND2 ASN A 70 C1 NAG A 601 1555 1555 1.52 LINK ND2 ASN A 79 C1 NAG A 602 1555 1555 1.43 LINK ND2 ASN A 114 C1 NAG D 1 1555 1555 1.51 LINK ND2 ASN A 146 C1 NAG E 1 1555 1555 1.52 LINK ND2 ASN A 156 C1 NAG F 1 1555 1555 1.51 LINK ND2 ASN A 171 C1 NAG A 603 1555 1555 1.53 LINK ND2 ASN A 184 C1 NAG A 604 1555 1555 1.53 LINK ND2 ASN A 198 C1 NAG A 605 1555 1555 1.53 LINK ND2 ASN A 202 C1 NAG A 606 1555 1555 1.52 LINK ND2 ASN A 212 C1 NAG G 1 1555 1555 1.52 LINK ND2 ASN A 244 C1 NAG A 607 1555 1555 1.52 LINK ND2 ASN A 278 C1 NAG I 1 1555 1555 1.49 LINK ND2 ASN A 284 C1 NAG J 1 1555 1555 1.51 LINK ND2 ASN A 295 C1 NAG K 1 1555 1555 1.51 LINK ND2 ASN A 306 C1 NAG A 608 1555 1555 1.51 LINK ND2 ASN A 316 C1 NAG M 1 1555 1555 1.53 LINK ND2 ASN A 371 C1 NAG A 610 1555 1555 1.51 LINK ND2 ASN A 377 C1 NAG N 1 1555 1555 1.51 LINK ND2 ASN A 460 C1 NAG O 1 1555 1555 1.51 LINK ND2 ASN A 476 C1 NAG A 609 1555 1555 1.53 LINK ND2 ASN A 479 C1 NAG P 1 1555 1555 1.52 LINK ND2 ASN B 627 C1 NAG B 701 1555 1555 1.52 LINK ND2 ASN B 636 C1 NAG B 702 1555 1555 1.53 LINK ND2 ASN B 652 C1 NAG B 703 1555 1555 1.53 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.51 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.51 LINK O6 BMA C 3 C1 MAN C 4 1555 1555 1.49 LINK O3 BMA C 3 C1 MAN C 8 1555 1555 1.52 LINK O3 MAN C 4 C1 MAN C 5 1555 1555 1.52 LINK O6 MAN C 4 C1 MAN C 7 1555 1555 1.50 LINK O2 MAN C 5 C1 MAN C 6 1555 1555 1.53 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.52 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.52 LINK O6 NAG E 1 C1 FUC E 3 1555 1555 1.49 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.51 LINK O6 NAG F 1 C1 FUC F 3 1555 1555 1.49 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.52 LINK O6 NAG G 1 C1 FUC G 3 1555 1555 1.50 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.48 LINK O4 NAG I 2 C1 BMA I 3 1555 1555 1.49 LINK O3 BMA I 3 C1 MAN I 4 1555 1555 1.53 LINK O6 BMA I 3 C1 MAN I 6 1555 1555 1.49 LINK O2 MAN I 4 C1 MAN I 5 1555 1555 1.52 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.51 LINK O4 NAG J 2 C1 BMA J 3 1555 1555 1.51 LINK O3 BMA J 3 C1 MAN J 4 1555 1555 1.53 LINK O6 BMA J 3 C1 MAN J 5 1555 1555 1.50 LINK O4 NAG K 1 C1 NAG K 2 1555 1555 1.51 LINK O4 NAG M 1 C1 NAG M 2 1555 1555 1.51 LINK O4 NAG N 1 C1 NAG N 2 1555 1555 1.52 LINK O4 NAG N 2 C1 BMA N 3 1555 1555 1.52 LINK O4 NAG O 1 C1 NAG O 2 1555 1555 1.52 LINK O4 NAG P 1 C1 NAG P 2 1555 1555 1.51 CISPEP 1 SER L 7 PRO L 8 0 -5.49 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000