HEADER OXIDOREDUCTASE 11-DEC-21 7T5C TITLE X-RAY STRUCTURE OF NEUROSPORA CRASSA POLYSACCHARIDE MONOOXYGENASE 9D TITLE 2 (NCLPMO9D) AT LOW PH COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYTIC POLYSACCHARIDE MONOOXYGENASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: RELATED TO CEL1 PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEUROSPORA CRASSA; SOURCE 3 ORGANISM_TAXID: 5141; SOURCE 4 GENE: G15G9.090, GE21DRAFT_7469; SOURCE 5 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: SUPERMAN5 KEYWDS LPMO, MONOOXYGENASE, OXIDOREDUCTASE, PMO, METALLOPROTEINS, COPPER EXPDTA X-RAY DIFFRACTION AUTHOR G.C.SCHRODER,F.MEILLEUR REVDAT 2 25-OCT-23 7T5C 1 REMARK REVDAT 1 28-DEC-22 7T5C 0 JRNL AUTH G.C.SCHRODER,W.B.O'DELL,S.P.WEBB,P.K.AGARWAL,F.MEILLEUR JRNL TITL CAPTURE OF ACTIVATED DIOXYGEN INTERMEDIATES AT THE JRNL TITL 2 COPPER-ACTIVE SITE OF A LYTIC POLYSACCHARIDE MONOOXYGENASE. JRNL REF CHEM SCI V. 13 13303 2022 JRNL REFN ISSN 2041-6520 JRNL PMID 36507176 JRNL DOI 10.1039/D2SC05031E REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH G.C.SCHRODER,W.B.O'DELL,P.D.SWARTZ,F.MEILLEUR REMARK 1 TITL PRELIMINARY RESULTS OF NEUTRON AND X-RAY DIFFRACTION DATA REMARK 1 TITL 2 COLLECTION ON A LYTIC POLYSACCHARIDE MONOOXYGENASE UNDER REMARK 1 TITL 3 REDUCED AND ACIDIC CONDITIONS. REMARK 1 REF ACTA CRYSTALLOGR F STRUCT V. 77 128 2021 REMARK 1 REF 2 BIOL COMMUN REMARK 1 REFN ESSN 2053-230X REMARK 1 DOI 10.1107/S2053230X21002399 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.14_3260 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 12.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.160 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 62505 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 3110 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 12.6100 - 4.1500 1.00 2810 148 0.1272 0.1369 REMARK 3 2 4.1500 - 3.3200 1.00 2745 127 0.1244 0.1580 REMARK 3 3 3.3200 - 2.9000 1.00 2759 137 0.1430 0.1623 REMARK 3 4 2.9000 - 2.6400 1.00 2697 145 0.1559 0.1976 REMARK 3 5 2.6400 - 2.4500 1.00 2711 159 0.1590 0.1584 REMARK 3 6 2.4500 - 2.3100 1.00 2708 137 0.1637 0.1854 REMARK 3 7 2.3100 - 2.1900 1.00 2689 139 0.1690 0.2138 REMARK 3 8 2.1900 - 2.1000 1.00 2677 165 0.1637 0.1834 REMARK 3 9 2.1000 - 2.0200 1.00 2713 129 0.1701 0.2113 REMARK 3 10 2.0200 - 1.9500 1.00 2704 144 0.1716 0.2205 REMARK 3 11 1.9500 - 1.8900 1.00 2690 128 0.1723 0.1939 REMARK 3 12 1.8900 - 1.8300 1.00 2680 134 0.1844 0.2094 REMARK 3 13 1.8300 - 1.7900 1.00 2715 148 0.1816 0.1932 REMARK 3 14 1.7900 - 1.7400 1.00 2670 127 0.1733 0.1970 REMARK 3 15 1.7400 - 1.7000 1.00 2691 143 0.1668 0.2245 REMARK 3 16 1.7000 - 1.6700 1.00 2706 137 0.1678 0.1861 REMARK 3 17 1.6700 - 1.6300 1.00 2662 141 0.1671 0.1900 REMARK 3 18 1.6300 - 1.6000 1.00 2712 140 0.1617 0.1744 REMARK 3 19 1.6000 - 1.5700 1.00 2672 141 0.1699 0.2071 REMARK 3 20 1.5700 - 1.5500 1.00 2675 135 0.1682 0.2153 REMARK 3 21 1.5500 - 1.5200 1.00 2698 143 0.1753 0.2338 REMARK 3 22 1.5200 - 1.5000 1.00 2611 163 0.1834 0.2238 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.116 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.027 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.52 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3673 REMARK 3 ANGLE : 1.097 5082 REMARK 3 CHIRALITY : 0.072 588 REMARK 3 PLANARITY : 0.009 660 REMARK 3 DIHEDRAL : 15.557 1362 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7T5C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-DEC-21. REMARK 100 THE DEPOSITION ID IS D_1000261512. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER R 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSALISPRO REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62507 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 12.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 8.200 REMARK 200 R MERGE (I) : 0.14200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 62.5600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.27750 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 7.140 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5TKH REMARK 200 REMARK 200 REMARK: CRYSTALS FORM RECTANGULAR SHAPES. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, HEPES, PH 4.4, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 21.10500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR B 25 O HOH B 402 1.38 REMARK 500 NE2 GLN A 56 O HOH A 401 1.45 REMARK 500 O HOH B 414 O HOH B 422 1.68 REMARK 500 O HOH B 429 O HOH B 643 1.95 REMARK 500 CZ TYR B 25 O HOH B 402 1.97 REMARK 500 O HOH B 726 O HOH B 769 1.98 REMARK 500 O HOH B 622 O HOH B 687 1.98 REMARK 500 OE2 GLU B 30 O HOH B 404 2.01 REMARK 500 O HOH B 435 O HOH B 588 2.04 REMARK 500 O HOH B 416 O HOH B 435 2.05 REMARK 500 O SER B 102 O HOH B 405 2.06 REMARK 500 O HOH B 416 O HOH B 456 2.09 REMARK 500 O HOH B 429 O HOH B 705 2.12 REMARK 500 O HOH A 722 O HOH B 644 2.13 REMARK 500 OD1 ASN B 97 O HOH B 406 2.13 REMARK 500 O4 NAG C 1 O5 NAG C 2 2.13 REMARK 500 O HOH B 410 O HOH B 417 2.15 REMARK 500 O HOH A 722 O HOH B 643 2.16 REMARK 500 O HOH B 519 O HOH B 774 2.19 REMARK 500 O HOH B 561 O HOH B 599 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 673 O HOH B 690 1554 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 40 177.18 67.33 REMARK 500 VAL A 79 -64.82 -108.81 REMARK 500 ASN B 40 179.27 68.27 REMARK 500 VAL B 79 -64.35 -108.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLN A 56 -10.76 REMARK 500 ASP A 96 -13.94 REMARK 500 THR B 45 -10.81 REMARK 500 THR B 45 -12.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 758 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A 759 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH A 760 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH A 761 DISTANCE = 6.58 ANGSTROMS REMARK 525 HOH A 762 DISTANCE = 7.05 ANGSTROMS REMARK 525 HOH B 812 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH B 813 DISTANCE = 6.57 ANGSTROMS REMARK 525 HOH B 814 DISTANCE = 7.63 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 301 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 1 N REMARK 620 2 HIS A 1 ND1 93.2 REMARK 620 3 HIS A 84 NE2 94.6 171.6 REMARK 620 4 TYR A 168 OH 78.7 86.7 97.8 REMARK 620 5 HOH A 501 O 167.2 84.8 88.2 88.6 REMARK 620 6 HOH A 598 O 106.8 84.6 90.2 170.0 85.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 301 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 411 O REMARK 620 2 HIS B 1 N 168.7 REMARK 620 3 HIS B 1 ND1 86.5 92.7 REMARK 620 4 HIS B 84 NE2 87.4 94.6 170.4 REMARK 620 5 TYR B 168 OH 87.8 80.9 90.6 96.6 REMARK 620 6 HOH B 609 O 90.2 100.9 81.9 90.7 172.3 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7T5D RELATED DB: PDB REMARK 900 RELATED LPMO NEUTRON STRUCTURE FOR PDB DEPOSITION REMARK 900 RELATED ID: 7T5E RELATED DB: PDB REMARK 900 RELATED LPMO JOINT X-RAY NEUTRON STRUCTURE FOR PDB DEPOSITION DBREF 7T5C A 1 223 UNP Q8WZQ2 Q8WZQ2_NEUCS 16 238 DBREF 7T5C B 1 223 UNP Q8WZQ2 Q8WZQ2_NEUCS 16 238 SEQRES 1 A 223 HIS THR ILE PHE SER SER LEU GLU VAL ASN GLY VAL ASN SEQRES 2 A 223 GLN GLY LEU GLY GLU GLY VAL ARG VAL PRO THR TYR ASN SEQRES 3 A 223 GLY PRO ILE GLU ASP VAL THR SER ALA SER ILE ALA CYS SEQRES 4 A 223 ASN GLY SER PRO ASN THR VAL ALA SER THR SER LYS VAL SEQRES 5 A 223 ILE THR VAL GLN ALA GLY THR ASN VAL THR ALA ILE TRP SEQRES 6 A 223 ARG TYR MET LEU SER THR THR GLY ASP SER PRO ALA ASP SEQRES 7 A 223 VAL MET ASP SER SER HIS LYS GLY PRO THR ILE ALA TYR SEQRES 8 A 223 LEU LYS LYS VAL ASP ASN ALA ALA THR ALA SER GLY VAL SEQRES 9 A 223 GLY ASN GLY TRP PHE LYS ILE GLN GLN ASP GLY MET ASP SEQRES 10 A 223 SER SER GLY VAL TRP GLY THR GLU ARG VAL ILE ASN GLY SEQRES 11 A 223 LYS GLY ARG HIS SER ILE LYS ILE PRO GLU CYS ILE ALA SEQRES 12 A 223 PRO GLY GLN TYR LEU LEU ARG ALA GLU MET ILE ALA LEU SEQRES 13 A 223 HIS ALA ALA SER ASN TYR PRO GLY ALA GLN PHE TYR MET SEQRES 14 A 223 GLU CYS ALA GLN LEU ASN VAL VAL GLY GLY THR GLY ALA SEQRES 15 A 223 LYS THR PRO SER THR VAL SER PHE PRO GLY ALA TYR SER SEQRES 16 A 223 GLY SER ASP PRO GLY VAL LYS ILE SER ILE TYR TRP PRO SEQRES 17 A 223 PRO VAL THR SER TYR THR VAL PRO GLY PRO SER VAL PHE SEQRES 18 A 223 THR CYS SEQRES 1 B 223 HIS THR ILE PHE SER SER LEU GLU VAL ASN GLY VAL ASN SEQRES 2 B 223 GLN GLY LEU GLY GLU GLY VAL ARG VAL PRO THR TYR ASN SEQRES 3 B 223 GLY PRO ILE GLU ASP VAL THR SER ALA SER ILE ALA CYS SEQRES 4 B 223 ASN GLY SER PRO ASN THR VAL ALA SER THR SER LYS VAL SEQRES 5 B 223 ILE THR VAL GLN ALA GLY THR ASN VAL THR ALA ILE TRP SEQRES 6 B 223 ARG TYR MET LEU SER THR THR GLY ASP SER PRO ALA ASP SEQRES 7 B 223 VAL MET ASP SER SER HIS LYS GLY PRO THR ILE ALA TYR SEQRES 8 B 223 LEU LYS LYS VAL ASP ASN ALA ALA THR ALA SER GLY VAL SEQRES 9 B 223 GLY ASN GLY TRP PHE LYS ILE GLN GLN ASP GLY MET ASP SEQRES 10 B 223 SER SER GLY VAL TRP GLY THR GLU ARG VAL ILE ASN GLY SEQRES 11 B 223 LYS GLY ARG HIS SER ILE LYS ILE PRO GLU CYS ILE ALA SEQRES 12 B 223 PRO GLY GLN TYR LEU LEU ARG ALA GLU MET ILE ALA LEU SEQRES 13 B 223 HIS ALA ALA SER ASN TYR PRO GLY ALA GLN PHE TYR MET SEQRES 14 B 223 GLU CYS ALA GLN LEU ASN VAL VAL GLY GLY THR GLY ALA SEQRES 15 B 223 LYS THR PRO SER THR VAL SER PHE PRO GLY ALA TYR SER SEQRES 16 B 223 GLY SER ASP PRO GLY VAL LYS ILE SER ILE TYR TRP PRO SEQRES 17 B 223 PRO VAL THR SER TYR THR VAL PRO GLY PRO SER VAL PHE SEQRES 18 B 223 THR CYS HET NAG C 1 14 HET NAG C 2 14 HET NAG D 1 14 HET NAG D 2 14 HET MAN D 3 11 HET CU A 301 1 HET CU B 301 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM CU COPPER (II) ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 4(C8 H15 N O6) FORMUL 4 MAN C6 H12 O6 FORMUL 5 CU 2(CU 2+) FORMUL 7 HOH *777(H2 O) HELIX 1 AA1 SER A 34 ALA A 38 5 5 HELIX 2 AA2 SER A 75 VAL A 79 5 5 HELIX 3 AA3 TRP A 122 ASN A 129 1 8 HELIX 4 AA4 SER B 34 ALA B 38 5 5 HELIX 5 AA5 SER B 75 VAL B 79 5 5 HELIX 6 AA6 TRP B 122 ASN B 129 1 8 SHEET 1 AA1 4 VAL A 12 ASN A 13 0 SHEET 2 AA1 4 ILE A 3 VAL A 9 -1 N VAL A 9 O VAL A 12 SHEET 3 AA1 4 ASN A 60 ARG A 66 -1 O ARG A 66 N ILE A 3 SHEET 4 AA1 4 ARG A 133 LYS A 137 -1 O ILE A 136 N VAL A 61 SHEET 1 AA2 3 VAL A 20 ARG A 21 0 SHEET 2 AA2 3 GLN A 166 VAL A 177 -1 O CYS A 171 N ARG A 21 SHEET 3 AA2 3 ILE A 53 GLN A 56 1 N ILE A 53 O GLN A 173 SHEET 1 AA3 6 VAL A 20 ARG A 21 0 SHEET 2 AA3 6 GLN A 166 VAL A 177 -1 O CYS A 171 N ARG A 21 SHEET 3 AA3 6 GLY A 145 ALA A 155 -1 N GLY A 145 O VAL A 176 SHEET 4 AA3 6 THR A 88 LYS A 94 -1 N ILE A 89 O GLU A 152 SHEET 5 AA3 6 GLY A 105 ASP A 114 -1 O ILE A 111 N ALA A 90 SHEET 6 AA3 6 VAL A 188 PHE A 190 -1 O PHE A 190 N GLY A 105 SHEET 1 AA4 4 VAL B 12 ASN B 13 0 SHEET 2 AA4 4 ILE B 3 VAL B 9 -1 N VAL B 9 O VAL B 12 SHEET 3 AA4 4 ASN B 60 ARG B 66 -1 O THR B 62 N GLU B 8 SHEET 4 AA4 4 ARG B 133 LYS B 137 -1 O ILE B 136 N VAL B 61 SHEET 1 AA5 3 VAL B 20 ARG B 21 0 SHEET 2 AA5 3 GLN B 166 VAL B 177 -1 O CYS B 171 N ARG B 21 SHEET 3 AA5 3 ILE B 53 GLN B 56 1 N ILE B 53 O GLN B 173 SHEET 1 AA6 6 VAL B 20 ARG B 21 0 SHEET 2 AA6 6 GLN B 166 VAL B 177 -1 O CYS B 171 N ARG B 21 SHEET 3 AA6 6 GLY B 145 ALA B 155 -1 N GLY B 145 O VAL B 176 SHEET 4 AA6 6 THR B 88 LYS B 94 -1 N ILE B 89 O GLU B 152 SHEET 5 AA6 6 GLY B 105 ASP B 114 -1 O ILE B 111 N ALA B 90 SHEET 6 AA6 6 VAL B 188 PHE B 190 -1 O VAL B 188 N TRP B 108 SSBOND 1 CYS A 39 CYS A 171 1555 1555 2.04 SSBOND 2 CYS A 141 CYS A 223 1555 1555 2.04 SSBOND 3 CYS B 39 CYS B 171 1555 1555 2.04 SSBOND 4 CYS B 141 CYS B 223 1555 1555 2.04 LINK ND2 ASN A 60 C1 NAG C 1 1555 1555 1.42 LINK ND2 ASN B 60 C1 NAG D 1 1555 1555 1.41 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.39 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.42 LINK O4 NAG D 2 C1 MAN D 3 1555 1555 1.42 LINK N HIS A 1 CU CU A 301 1555 1555 2.09 LINK ND1 HIS A 1 CU CU A 301 1555 1555 1.98 LINK NE2 HIS A 84 CU CU A 301 1555 1555 2.02 LINK OH TYR A 168 CU CU A 301 1555 1555 2.68 LINK CU CU A 301 O HOH A 501 1555 1555 2.12 LINK CU CU A 301 O HOH A 598 1555 1555 2.42 LINK O HOH A 411 CU CU B 301 1555 1555 2.11 LINK N HIS B 1 CU CU B 301 1555 1555 2.13 LINK ND1 HIS B 1 CU CU B 301 1555 1555 2.00 LINK NE2 HIS B 84 CU CU B 301 1555 1555 2.01 LINK OH TYR B 168 CU CU B 301 1555 1555 2.65 LINK CU CU B 301 O HOH B 609 1555 1555 2.43 CISPEP 1 SER A 42 PRO A 43 0 12.75 CISPEP 2 SER A 42 PRO A 43 0 12.69 CISPEP 3 TYR A 162 PRO A 163 0 2.15 CISPEP 4 PHE A 190 PRO A 191 0 -3.00 CISPEP 5 TRP A 207 PRO A 208 0 -5.81 CISPEP 6 SER B 42 PRO B 43 0 8.58 CISPEP 7 TYR B 162 PRO B 163 0 2.52 CISPEP 8 PHE B 190 PRO B 191 0 -2.13 CISPEP 9 TRP B 207 PRO B 208 0 -3.70 CRYST1 67.668 42.210 69.715 90.00 98.91 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014778 0.000000 0.002317 0.00000 SCALE2 0.000000 0.023691 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014519 0.00000