HEADER TRANSFERASE 29-DEC-21 7TCY TITLE THE UBIQUITIN-ASSOCIATED DOMAIN OF HUMAN THIRTY-EIGHT NEGATIVE KINASE TITLE 2 I COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-RECEPTOR TYROSINE-PROTEIN KINASE TNK1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UBA DOMAIN (UNP RESIDUES 589-666); COMPND 5 SYNONYM: CD38 NEGATIVE KINASE 1; COMPND 6 EC: 2.7.10.2; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TNK1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET42_SUMO KEYWDS KINASE, UBIQUITIN-ASSOCIATED, UBA, ONCOPROTEIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.NAWARATHNAGE,R.D.BUNN,C.STEWART,T.DOUKOV,J.D.MOODY REVDAT 3 20-DEC-23 7TCY 1 JRNL REVDAT 2 15-NOV-23 7TCY 1 AUTHOR JRNL REVDAT 1 11-JAN-23 7TCY 0 JRNL AUTH S.NAWARATHNAGE,Y.J.TSENG,S.SOLEIMANI,T.SMITH, JRNL AUTH 2 M.J.PEDROZA ROMO,W.O.ABIODUN,C.M.EGBERT,D.MADHUSANKA,D.BUNN, JRNL AUTH 3 B.WOODS,E.TSUBAKI,C.STEWART,S.BROWN,T.DOUKOV,J.L.ANDERSEN, JRNL AUTH 4 J.D.MOODY JRNL TITL FUSION CRYSTALLIZATION REVEALS THE BEHAVIOR OF BOTH THE 1TEL JRNL TITL 2 CRYSTALLIZATION CHAPERONE AND THE TNK1 UBA DOMAIN. JRNL REF STRUCTURE V. 31 1589 2023 JRNL REFN ISSN 0969-2126 JRNL PMID 37776857 JRNL DOI 10.1016/J.STR.2023.09.001 REMARK 2 REMARK 2 RESOLUTION. 1.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 19046 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.260 REMARK 3 FREE R VALUE TEST SET COUNT : 1001 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.0300 - 2.9400 1.00 2802 151 0.1786 0.2057 REMARK 3 2 2.9400 - 2.3300 1.00 2642 165 0.1720 0.1903 REMARK 3 3 2.3300 - 2.0400 1.00 2621 140 0.1837 0.2188 REMARK 3 4 2.0400 - 1.8500 0.85 2254 116 0.0000 0.1968 REMARK 3 5 1.8500 - 1.7200 1.00 2567 154 0.2225 0.2578 REMARK 3 6 1.7200 - 1.6200 1.00 2588 142 0.2290 0.2871 REMARK 3 7 1.6200 - 1.5400 1.00 2571 133 0.2776 0.3324 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.192 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.979 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.01 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 1277 REMARK 3 ANGLE : 1.160 1736 REMARK 3 CHIRALITY : 0.067 198 REMARK 3 PLANARITY : 0.008 223 REMARK 3 DIHEDRAL : 14.717 461 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 589 THROUGH 601 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.0483 18.2902 6.6744 REMARK 3 T TENSOR REMARK 3 T11: 0.2305 T22: 0.2840 REMARK 3 T33: 0.2324 T12: 0.0258 REMARK 3 T13: -0.0506 T23: 0.0165 REMARK 3 L TENSOR REMARK 3 L11: 6.0832 L22: 4.5702 REMARK 3 L33: 3.5994 L12: -5.2283 REMARK 3 L13: -4.5891 L23: 4.0041 REMARK 3 S TENSOR REMARK 3 S11: 0.1027 S12: 0.1797 S13: -0.3404 REMARK 3 S21: -0.3451 S22: -0.5150 S23: 0.9926 REMARK 3 S31: -0.1952 S32: -0.6641 S33: 0.3879 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 602 THROUGH 620 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.1018 14.3216 9.9004 REMARK 3 T TENSOR REMARK 3 T11: 0.1435 T22: 0.1752 REMARK 3 T33: 0.1104 T12: -0.0099 REMARK 3 T13: -0.0001 T23: 0.0224 REMARK 3 L TENSOR REMARK 3 L11: 3.9485 L22: 6.8769 REMARK 3 L33: 7.9780 L12: 2.6488 REMARK 3 L13: 2.4340 L23: 5.2798 REMARK 3 S TENSOR REMARK 3 S11: 0.0478 S12: -0.1350 S13: -0.0447 REMARK 3 S21: -0.0463 S22: 0.0478 S23: -0.0782 REMARK 3 S31: 0.3018 S32: -0.2388 S33: -0.0804 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 621 THROUGH 637 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.1332 11.6552 3.6256 REMARK 3 T TENSOR REMARK 3 T11: 0.1155 T22: 0.1130 REMARK 3 T33: 0.1028 T12: -0.0248 REMARK 3 T13: -0.0164 T23: -0.0066 REMARK 3 L TENSOR REMARK 3 L11: 7.9922 L22: 9.1233 REMARK 3 L33: 7.0608 L12: -5.7170 REMARK 3 L13: -3.0113 L23: 4.4386 REMARK 3 S TENSOR REMARK 3 S11: -0.0094 S12: -0.0972 S13: -0.1483 REMARK 3 S21: 0.2060 S22: 0.0385 S23: -0.2692 REMARK 3 S31: 0.1701 S32: 0.0634 S33: -0.0142 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 638 THROUGH 650 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.1007 10.6132 -2.0388 REMARK 3 T TENSOR REMARK 3 T11: 0.1676 T22: 0.1882 REMARK 3 T33: 0.1541 T12: -0.0173 REMARK 3 T13: 0.0018 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 9.1174 L22: 6.6313 REMARK 3 L33: 9.2607 L12: -3.1672 REMARK 3 L13: 6.2790 L23: -2.6232 REMARK 3 S TENSOR REMARK 3 S11: 0.1543 S12: -0.2699 S13: -0.0011 REMARK 3 S21: 0.1202 S22: -0.1066 S23: -0.3197 REMARK 3 S31: 0.2266 S32: 0.2072 S33: 0.0039 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 651 THROUGH 665 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.0993 5.6483 -7.3232 REMARK 3 T TENSOR REMARK 3 T11: 0.1467 T22: 0.1381 REMARK 3 T33: 0.1113 T12: -0.0002 REMARK 3 T13: -0.0054 T23: -0.0288 REMARK 3 L TENSOR REMARK 3 L11: 5.7059 L22: 8.2434 REMARK 3 L33: 6.2397 L12: -0.4932 REMARK 3 L13: 0.0526 L23: 0.0311 REMARK 3 S TENSOR REMARK 3 S11: 0.0509 S12: 0.1529 S13: -0.3963 REMARK 3 S21: -0.4280 S22: -0.0494 S23: -0.0670 REMARK 3 S31: 0.3266 S32: -0.0772 S33: -0.0137 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 589 THROUGH 601 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.8162 23.5564 -4.2761 REMARK 3 T TENSOR REMARK 3 T11: 0.2495 T22: 0.3090 REMARK 3 T33: 0.1776 T12: 0.0482 REMARK 3 T13: 0.0147 T23: 0.0294 REMARK 3 L TENSOR REMARK 3 L11: 5.5737 L22: 5.7341 REMARK 3 L33: 5.0789 L12: 4.5619 REMARK 3 L13: 3.9475 L23: 5.3397 REMARK 3 S TENSOR REMARK 3 S11: 0.0291 S12: -0.7365 S13: -0.1339 REMARK 3 S21: 0.9334 S22: 0.0463 S23: 0.0128 REMARK 3 S31: 0.7786 S32: -0.2414 S33: -0.0542 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 602 THROUGH 620 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.5091 29.6218 -8.1622 REMARK 3 T TENSOR REMARK 3 T11: 0.2608 T22: 0.2021 REMARK 3 T33: 0.1800 T12: 0.0192 REMARK 3 T13: -0.0086 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 4.7843 L22: 3.8190 REMARK 3 L33: 6.6965 L12: -4.2020 REMARK 3 L13: -2.6665 L23: 3.3035 REMARK 3 S TENSOR REMARK 3 S11: 0.5931 S12: 0.4411 S13: 0.3062 REMARK 3 S21: -0.7646 S22: -0.4621 S23: -0.0085 REMARK 3 S31: -0.6601 S32: -0.4910 S33: -0.1476 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 621 THROUGH 635 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.7475 34.1474 -2.1658 REMARK 3 T TENSOR REMARK 3 T11: 0.1439 T22: 0.1257 REMARK 3 T33: 0.1513 T12: 0.0093 REMARK 3 T13: 0.0208 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 7.3361 L22: 2.7864 REMARK 3 L33: 7.8145 L12: 3.1786 REMARK 3 L13: 0.9591 L23: 3.0626 REMARK 3 S TENSOR REMARK 3 S11: 0.0980 S12: 0.2869 S13: 0.5404 REMARK 3 S21: -0.5700 S22: -0.0636 S23: -0.2207 REMARK 3 S31: -0.3353 S32: 0.0320 S33: -0.0323 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 636 THROUGH 640 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.0145 44.9641 0.0218 REMARK 3 T TENSOR REMARK 3 T11: 0.7939 T22: 0.4302 REMARK 3 T33: 1.0417 T12: -0.4054 REMARK 3 T13: -0.0399 T23: 0.7234 REMARK 3 L TENSOR REMARK 3 L11: 0.1812 L22: 0.8715 REMARK 3 L33: 0.4974 L12: -0.3681 REMARK 3 L13: -0.2810 L23: 0.6627 REMARK 3 S TENSOR REMARK 3 S11: 0.0964 S12: 0.1369 S13: 0.2732 REMARK 3 S21: -0.4120 S22: -0.1760 S23: -0.3357 REMARK 3 S31: -0.6285 S32: 0.5083 S33: -0.1520 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 641 THROUGH 654 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.8506 34.4298 4.6742 REMARK 3 T TENSOR REMARK 3 T11: 0.1641 T22: 0.2266 REMARK 3 T33: 0.2773 T12: 0.0109 REMARK 3 T13: 0.0177 T23: 0.0135 REMARK 3 L TENSOR REMARK 3 L11: 2.2410 L22: 9.2432 REMARK 3 L33: 2.1298 L12: 0.3674 REMARK 3 L13: 0.5077 L23: -0.7877 REMARK 3 S TENSOR REMARK 3 S11: -0.2977 S12: 0.3533 S13: 0.0552 REMARK 3 S21: -0.2692 S22: -0.1654 S23: -0.8173 REMARK 3 S31: 0.4632 S32: 0.3428 S33: 0.5057 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 655 THROUGH 665 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.8331 42.9432 8.8466 REMARK 3 T TENSOR REMARK 3 T11: 0.1620 T22: 0.2656 REMARK 3 T33: 0.3397 T12: 0.0029 REMARK 3 T13: 0.0202 T23: -0.0679 REMARK 3 L TENSOR REMARK 3 L11: 4.4896 L22: 3.8098 REMARK 3 L33: 9.1969 L12: 3.8844 REMARK 3 L13: 4.7208 L23: 2.7256 REMARK 3 S TENSOR REMARK 3 S11: 0.2119 S12: -0.4720 S13: 0.5524 REMARK 3 S21: 0.6033 S22: -0.1530 S23: 0.2074 REMARK 3 S31: -0.1666 S32: -0.8188 S33: -0.0697 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7TCY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1000262041. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979460 REMARK 200 MONOCHROMATOR : SI(111) AND SI(220) DOUBLE REMARK 200 CRYSTAL REMARK 200 OPTICS : MIRROR: RH COATED FLAT BENT M0, REMARK 200 TOROIDAL FOCUSING POST- REMARK 200 MONOCHROMATOR M1 REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19047 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.540 REMARK 200 RESOLUTION RANGE LOW (A) : 44.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 10.00 REMARK 200 R MERGE (I) : 0.05574 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.8600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 8.60 REMARK 200 R MERGE FOR SHELL (I) : 0.81320 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.480 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.19.2_4158 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 31.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.79 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM BIS-TRIS, PH 6.8, 100 MM REMARK 280 MAGNESIUM FORMATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 26.86700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.03500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.86700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.03500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 851 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 666 REMARK 465 PRO B 666 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 590 CG CD OE1 OE2 REMARK 470 SER A 638 OG REMARK 470 SER B 637 OG REMARK 470 SER B 638 OG REMARK 470 ARG B 639 CZ NH1 NH2 REMARK 470 ASP B 643 CG OD1 OD2 REMARK 470 ARG B 665 CG CD NE CZ NH1 NH2 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 703 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PO4 A 702 O1 REMARK 620 2 HOH B 811 O 118.4 REMARK 620 3 HOH B 822 O 94.7 90.8 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7T8J RELATED DB: PDB REMARK 900 THE UBIQUITIN-ASSOCIATED DOMAIN OF HUMAN THIRTY-EIGHT NEGATIVE REMARK 900 KINASE-1 FLEXIBLY FUSED TO THE 1TEL CRYSTALLIZATION CHAPERONE VIA A REMARK 900 4-GLYCINE LINKER DBREF 7TCY A 589 666 UNP Q13470 TNK1_HUMAN 589 666 DBREF 7TCY B 589 666 UNP Q13470 TNK1_HUMAN 589 666 SEQADV 7TCY GLY A 589 UNP Q13470 PRO 589 ENGINEERED MUTATION SEQADV 7TCY ALA A 610 UNP Q13470 CYS 610 ENGINEERED MUTATION SEQADV 7TCY ALA A 644 UNP Q13470 CYS 644 ENGINEERED MUTATION SEQADV 7TCY GLY B 589 UNP Q13470 PRO 589 ENGINEERED MUTATION SEQADV 7TCY ALA B 610 UNP Q13470 CYS 610 ENGINEERED MUTATION SEQADV 7TCY ALA B 644 UNP Q13470 CYS 644 ENGINEERED MUTATION SEQRES 1 A 78 GLY GLU LEU GLN ARG LYS ILE MET GLU VAL GLU LEU SER SEQRES 2 A 78 VAL HIS GLY VAL THR HIS GLN GLU ALA GLN THR ALA LEU SEQRES 3 A 78 GLY ALA THR GLY GLY ASP VAL VAL SER ALA ILE ARG ASN SEQRES 4 A 78 LEU LYS VAL ASP GLN LEU PHE HIS LEU SER SER ARG SER SEQRES 5 A 78 ARG ALA ASP ALA TRP ARG ILE LEU GLU HIS TYR GLN TRP SEQRES 6 A 78 ASP LEU SER ALA ALA SER ARG TYR VAL LEU ALA ARG PRO SEQRES 1 B 78 GLY GLU LEU GLN ARG LYS ILE MET GLU VAL GLU LEU SER SEQRES 2 B 78 VAL HIS GLY VAL THR HIS GLN GLU ALA GLN THR ALA LEU SEQRES 3 B 78 GLY ALA THR GLY GLY ASP VAL VAL SER ALA ILE ARG ASN SEQRES 4 B 78 LEU LYS VAL ASP GLN LEU PHE HIS LEU SER SER ARG SER SEQRES 5 B 78 ARG ALA ASP ALA TRP ARG ILE LEU GLU HIS TYR GLN TRP SEQRES 6 B 78 ASP LEU SER ALA ALA SER ARG TYR VAL LEU ALA ARG PRO HET FMT A 701 4 HET PO4 A 702 5 HET MG A 703 1 HET FMT A 704 4 HET CL A 705 1 HET CL A 706 1 HET FMT A 707 4 HET FMT B 701 4 HETNAM FMT FORMIC ACID HETNAM PO4 PHOSPHATE ION HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION FORMUL 3 FMT 4(C H2 O2) FORMUL 4 PO4 O4 P 3- FORMUL 5 MG MG 2+ FORMUL 7 CL 2(CL 1-) FORMUL 11 HOH *127(H2 O) HELIX 1 AA1 GLY A 589 VAL A 602 1 14 HELIX 2 AA2 THR A 606 THR A 617 1 12 HELIX 3 AA3 ASP A 620 SER A 638 1 19 HELIX 4 AA4 SER A 640 TYR A 651 1 12 HELIX 5 AA5 ASP A 654 ALA A 664 1 11 HELIX 6 AA6 GLU B 590 VAL B 602 1 13 HELIX 7 AA7 THR B 606 THR B 617 1 12 HELIX 8 AA8 ASP B 620 HIS B 635 1 16 HELIX 9 AA9 SER B 640 TYR B 651 1 12 HELIX 10 AB1 ASP B 654 ARG B 665 1 12 LINK O1 PO4 A 702 MG MG A 703 1555 1555 2.78 LINK MG MG A 703 O HOH B 811 1555 1556 1.96 LINK MG MG A 703 O HOH B 822 1555 4456 2.97 CRYST1 53.734 88.070 26.497 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018610 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011355 0.000000 0.00000 SCALE3 0.000000 0.000000 0.037740 0.00000