HEADER METAL BINDING PROTEIN 04-JAN-22 7TE5 TITLE CRYSTAL STRUCTURE OF THE PIRIN FAMILY PROTEIN REDOX-SENSITIVE BICUPIN TITLE 2 YHAK FROM YERSINIA PESTIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PIRIN FAMILY PROTEIN YHAK; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PIRIN-RELATED PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: YERSINIA PESTIS CO92; SOURCE 3 ORGANISM_TAXID: 214092; SOURCE 4 GENE: YP_1950, EGX46_10965; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: GOLD KEYWDS PIRIN FAMILY PROTEIN, BICUPIN, STRUCTURAL GENOMICS, CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, CSGID, METAL BINDING KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,G.CHHOR,M.ENDRES,G.BABNIGG,O.SCHNEEWIND,A.JOACHIMIAK,CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 1 12-JAN-22 7TE5 0 JRNL AUTH Y.KIM,G.CHHOR,M.ENDRES,G.BABNIGG,O.SCHNEEWIND,A.JOACHIMIAK, JRNL AUTH 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 3 (CSGID) JRNL TITL CRYSTAL STRUCTURE OF THE PIRIN FAMILY PROTEIN JRNL TITL 2 REDOX-SENSITIVE BICUPIN YHAK FROM YERSINIA PESTIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.31 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.280 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 49985 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.920 REMARK 3 FREE R VALUE TEST SET COUNT : 2460 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.3100 - 4.7600 0.93 2789 166 0.1416 0.2197 REMARK 3 2 4.7600 - 3.7800 0.94 2882 166 0.1239 0.1762 REMARK 3 3 3.7800 - 3.3000 0.95 2858 146 0.1430 0.2010 REMARK 3 4 3.3000 - 3.0000 0.95 2899 146 0.1651 0.1997 REMARK 3 5 3.0000 - 2.7900 0.94 2833 169 0.1831 0.2145 REMARK 3 6 2.7800 - 2.6200 0.96 2935 108 0.2024 0.2116 REMARK 3 7 2.6200 - 2.4900 0.94 2866 172 0.2078 0.2368 REMARK 3 8 2.4900 - 2.3800 0.95 2844 148 0.2124 0.2754 REMARK 3 9 2.3800 - 2.2900 0.96 2903 134 0.2130 0.2621 REMARK 3 10 2.2900 - 2.2100 0.95 2863 136 0.2080 0.2381 REMARK 3 11 2.2100 - 2.1400 0.96 2915 128 0.2094 0.2058 REMARK 3 12 2.1400 - 2.0800 0.96 2899 125 0.2118 0.2157 REMARK 3 13 2.0800 - 2.0300 0.95 2907 134 0.2136 0.2534 REMARK 3 14 2.0300 - 1.9800 0.92 2780 155 0.2173 0.2489 REMARK 3 15 1.9800 - 1.9300 0.90 2714 126 0.2303 0.2420 REMARK 3 16 1.9300 - 1.8900 0.83 2514 124 0.2499 0.2177 REMARK 3 17 1.8900 - 1.8500 0.72 2175 126 0.2494 0.2525 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.591 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 4537 REMARK 3 ANGLE : 0.734 6180 REMARK 3 CHIRALITY : 0.050 659 REMARK 3 PLANARITY : 0.005 828 REMARK 3 DIHEDRAL : 5.998 620 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.6122 27.6845 26.2250 REMARK 3 T TENSOR REMARK 3 T11: 0.3359 T22: 0.2481 REMARK 3 T33: 0.1355 T12: 0.0481 REMARK 3 T13: 0.0456 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 0.5826 L22: 0.6451 REMARK 3 L33: 2.2224 L12: 0.2079 REMARK 3 L13: -0.3310 L23: -0.4097 REMARK 3 S TENSOR REMARK 3 S11: 0.0047 S12: 0.1033 S13: -0.0567 REMARK 3 S21: -0.2905 S22: -0.0946 S23: -0.1720 REMARK 3 S31: 0.0622 S32: 0.1440 S33: 0.0526 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 50 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.0943 30.9012 42.8458 REMARK 3 T TENSOR REMARK 3 T11: 0.3517 T22: 0.2324 REMARK 3 T33: 0.1474 T12: 0.0464 REMARK 3 T13: 0.0265 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 0.5555 L22: 1.2860 REMARK 3 L33: 1.4548 L12: 0.7155 REMARK 3 L13: -0.5171 L23: -1.2627 REMARK 3 S TENSOR REMARK 3 S11: 0.0794 S12: -0.1213 S13: -0.0134 REMARK 3 S21: 0.2399 S22: -0.1195 S23: -0.0679 REMARK 3 S31: -0.2618 S32: 0.0155 S33: 0.0252 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 129 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.4636 43.2577 32.9783 REMARK 3 T TENSOR REMARK 3 T11: 0.3522 T22: 0.2141 REMARK 3 T33: 0.1497 T12: 0.0724 REMARK 3 T13: 0.0610 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 4.2478 L22: 1.9510 REMARK 3 L33: 0.4147 L12: 0.4717 REMARK 3 L13: 0.2365 L23: -0.0559 REMARK 3 S TENSOR REMARK 3 S11: 0.0464 S12: -0.0579 S13: 0.0175 REMARK 3 S21: 0.1409 S22: -0.0784 S23: 0.1650 REMARK 3 S31: -0.2456 S32: -0.0682 S33: 0.0232 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 180 THROUGH 283 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.1481 35.7182 23.9052 REMARK 3 T TENSOR REMARK 3 T11: 0.2698 T22: 0.2442 REMARK 3 T33: 0.0639 T12: 0.0227 REMARK 3 T13: 0.0417 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 2.1467 L22: 1.8972 REMARK 3 L33: 0.4997 L12: 0.5207 REMARK 3 L13: 0.3508 L23: 0.2645 REMARK 3 S TENSOR REMARK 3 S11: -0.0079 S12: -0.0472 S13: 0.0100 REMARK 3 S21: -0.0792 S22: -0.1017 S23: 0.0608 REMARK 3 S31: -0.0847 S32: -0.0676 S33: 0.0985 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 0 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.4454 2.0178 42.6999 REMARK 3 T TENSOR REMARK 3 T11: 0.3063 T22: 0.2556 REMARK 3 T33: 0.1458 T12: 0.0319 REMARK 3 T13: -0.0109 T23: 0.0261 REMARK 3 L TENSOR REMARK 3 L11: 0.6539 L22: 1.1514 REMARK 3 L33: 0.4240 L12: -0.4904 REMARK 3 L13: 0.2352 L23: -0.7216 REMARK 3 S TENSOR REMARK 3 S11: -0.0652 S12: -0.1352 S13: -0.0563 REMARK 3 S21: -0.0468 S22: 0.0746 S23: 0.0615 REMARK 3 S31: 0.1120 S32: 0.1159 S33: 0.0178 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 38 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): 54.5017 4.7341 25.0595 REMARK 3 T TENSOR REMARK 3 T11: 0.2565 T22: 0.2765 REMARK 3 T33: 0.1176 T12: 0.0685 REMARK 3 T13: -0.0135 T23: 0.0241 REMARK 3 L TENSOR REMARK 3 L11: 1.9635 L22: 0.8477 REMARK 3 L33: 1.2937 L12: -0.0443 REMARK 3 L13: -1.4793 L23: 0.3558 REMARK 3 S TENSOR REMARK 3 S11: 0.0416 S12: 0.3188 S13: 0.0149 REMARK 3 S21: -0.1714 S22: -0.0444 S23: 0.0329 REMARK 3 S31: 0.0111 S32: -0.0885 S33: 0.0134 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 139 THROUGH 228 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.9102 17.5548 40.7073 REMARK 3 T TENSOR REMARK 3 T11: 0.3428 T22: 0.2158 REMARK 3 T33: 0.1404 T12: 0.0639 REMARK 3 T13: 0.0265 T23: 0.0215 REMARK 3 L TENSOR REMARK 3 L11: 2.3503 L22: 0.7182 REMARK 3 L33: 0.7561 L12: -0.0572 REMARK 3 L13: 0.6461 L23: -0.3890 REMARK 3 S TENSOR REMARK 3 S11: 0.0168 S12: 0.0589 S13: 0.1708 REMARK 3 S21: -0.0038 S22: -0.0557 S23: -0.0928 REMARK 3 S31: -0.0805 S32: 0.0371 S33: 0.0355 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 229 THROUGH 283 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.1782 2.6194 38.2690 REMARK 3 T TENSOR REMARK 3 T11: 0.2603 T22: 0.2113 REMARK 3 T33: 0.1497 T12: 0.0572 REMARK 3 T13: 0.0138 T23: 0.0354 REMARK 3 L TENSOR REMARK 3 L11: 1.6087 L22: 1.8274 REMARK 3 L33: 0.7246 L12: 0.3753 REMARK 3 L13: -0.7431 L23: 0.1770 REMARK 3 S TENSOR REMARK 3 S11: -0.0662 S12: -0.0279 S13: -0.0867 REMARK 3 S21: 0.0732 S22: -0.1088 S23: 0.2091 REMARK 3 S31: -0.0034 S32: -0.1286 S33: 0.1512 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7TE5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1000262110. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-JUN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97921 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50165 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.55300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000, MLPHARE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRI-SODIUM CITRATE PH 5.6, 10 REMARK 280 %(W/V) PEG4000, 10 %(W/V) ISOPROPANOL, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.84867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 81.69733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 GLY A 284 REMARK 465 ASN A 285 REMARK 465 MSE A 286 REMARK 465 ASP A 287 REMARK 465 VAL A 288 REMARK 465 ALA A 289 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 GLY B 284 REMARK 465 ASN B 285 REMARK 465 MSE B 286 REMARK 465 ASP B 287 REMARK 465 VAL B 288 REMARK 465 ALA B 289 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MSE A 135 34.33 -94.42 REMARK 500 ARG A 221 -169.77 -125.78 REMARK 500 MSE A 265 -166.64 -124.10 REMARK 500 PHE B 66 -166.93 -160.02 REMARK 500 ASP B 217 -60.25 -136.72 REMARK 500 ARG B 221 -157.22 -121.64 REMARK 500 ALA B 223 19.83 59.91 REMARK 500 MSE B 265 -156.77 -119.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 601 DISTANCE = 7.54 ANGSTROMS REMARK 525 HOH B 594 DISTANCE = 6.06 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 107 OE2 REMARK 620 2 HOH B 426 O 70.8 REMARK 620 N 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: IDP64164 RELATED DB: TARGETTRACK DBREF1 7TE5 A 1 289 UNP A0A2U2H063_YERPE DBREF2 7TE5 A A0A2U2H063 1 289 DBREF1 7TE5 B 1 289 UNP A0A2U2H063_YERPE DBREF2 7TE5 B A0A2U2H063 1 289 SEQADV 7TE5 SER A -2 UNP A0A2U2H06 EXPRESSION TAG SEQADV 7TE5 ASN A -1 UNP A0A2U2H06 EXPRESSION TAG SEQADV 7TE5 ALA A 0 UNP A0A2U2H06 EXPRESSION TAG SEQADV 7TE5 SER B -2 UNP A0A2U2H06 EXPRESSION TAG SEQADV 7TE5 ASN B -1 UNP A0A2U2H06 EXPRESSION TAG SEQADV 7TE5 ALA B 0 UNP A0A2U2H06 EXPRESSION TAG SEQRES 1 A 292 SER ASN ALA MSE LYS LYS VAL GLN GLY ILE TYR ARG ALA SEQRES 2 A 292 PRO ARG GLN HIS TRP VAL GLY ASP GLY PHE PRO VAL ARG SEQRES 3 A 292 SER MSE PHE SER TYR GLN SER HIS GLY LYS GLN LEU SER SEQRES 4 A 292 PRO PHE LEU LEU LEU ASP TYR ALA GLY PRO MSE ASP PHE SEQRES 5 A 292 THR PRO THR THR GLN ARG ARG GLY VAL GLY GLN HIS PRO SEQRES 6 A 292 HIS ARG GLY PHE GLU THR VAL THR ILE VAL TYR HIS GLY SEQRES 7 A 292 GLU VAL GLU HIS ARG ASP SER THR GLY ASN GLY GLY ILE SEQRES 8 A 292 ILE GLY PRO GLY ASP VAL GLN TRP MSE THR ALA GLY ALA SEQRES 9 A 292 GLY ILE LEU HIS GLU GLU PHE HIS SER ASP ALA PHE ALA SEQRES 10 A 292 GLN LYS GLY GLY PRO PHE GLU MSE VAL GLN LEU TRP VAL SEQRES 11 A 292 ASN LEU PRO ALA LYS ASP LYS MSE THR ALA PRO GLY TYR SEQRES 12 A 292 GLN ALA ILE ARG ARG GLU ALA ILE PRO GLN VAL ASN LEU SEQRES 13 A 292 PRO ASP ASP ALA GLY ASN LEU ARG VAL ILE ALA GLY GLU SEQRES 14 A 292 TYR ALA GLY ASN ILE GLY PRO ALA LYS THR PHE SER PRO SEQRES 15 A 292 LEU ASN VAL TRP ASP ILE ARG LEU THR GLN GLY LYS SER SEQRES 16 A 292 CYS GLU PHE SER LEU PRO ALA GLY TRP ASN THR ALA LEU SEQRES 17 A 292 ILE VAL LEU HIS GLY THR LEU LEU VAL ASN GLY ASP ALA SEQRES 18 A 292 ILE ALA ARG GLU ALA GLU MSE VAL LEU LEU ASP PRO THR SEQRES 19 A 292 GLY THR HIS LEU SER ILE GLU ALA ASN ASN ASP THR VAL SEQRES 20 A 292 LEU LEU LEU LEU SER GLY GLU PRO ILE ASP GLU PRO ILE SEQRES 21 A 292 VAL GLY TYR GLY PRO PHE VAL MSE ASN THR GLN ALA GLN SEQRES 22 A 292 ILE ALA GLU ALA ILE ALA ASP PHE ASN GLY GLY ARG PHE SEQRES 23 A 292 GLY ASN MSE ASP VAL ALA SEQRES 1 B 292 SER ASN ALA MSE LYS LYS VAL GLN GLY ILE TYR ARG ALA SEQRES 2 B 292 PRO ARG GLN HIS TRP VAL GLY ASP GLY PHE PRO VAL ARG SEQRES 3 B 292 SER MSE PHE SER TYR GLN SER HIS GLY LYS GLN LEU SER SEQRES 4 B 292 PRO PHE LEU LEU LEU ASP TYR ALA GLY PRO MSE ASP PHE SEQRES 5 B 292 THR PRO THR THR GLN ARG ARG GLY VAL GLY GLN HIS PRO SEQRES 6 B 292 HIS ARG GLY PHE GLU THR VAL THR ILE VAL TYR HIS GLY SEQRES 7 B 292 GLU VAL GLU HIS ARG ASP SER THR GLY ASN GLY GLY ILE SEQRES 8 B 292 ILE GLY PRO GLY ASP VAL GLN TRP MSE THR ALA GLY ALA SEQRES 9 B 292 GLY ILE LEU HIS GLU GLU PHE HIS SER ASP ALA PHE ALA SEQRES 10 B 292 GLN LYS GLY GLY PRO PHE GLU MSE VAL GLN LEU TRP VAL SEQRES 11 B 292 ASN LEU PRO ALA LYS ASP LYS MSE THR ALA PRO GLY TYR SEQRES 12 B 292 GLN ALA ILE ARG ARG GLU ALA ILE PRO GLN VAL ASN LEU SEQRES 13 B 292 PRO ASP ASP ALA GLY ASN LEU ARG VAL ILE ALA GLY GLU SEQRES 14 B 292 TYR ALA GLY ASN ILE GLY PRO ALA LYS THR PHE SER PRO SEQRES 15 B 292 LEU ASN VAL TRP ASP ILE ARG LEU THR GLN GLY LYS SER SEQRES 16 B 292 CYS GLU PHE SER LEU PRO ALA GLY TRP ASN THR ALA LEU SEQRES 17 B 292 ILE VAL LEU HIS GLY THR LEU LEU VAL ASN GLY ASP ALA SEQRES 18 B 292 ILE ALA ARG GLU ALA GLU MSE VAL LEU LEU ASP PRO THR SEQRES 19 B 292 GLY THR HIS LEU SER ILE GLU ALA ASN ASN ASP THR VAL SEQRES 20 B 292 LEU LEU LEU LEU SER GLY GLU PRO ILE ASP GLU PRO ILE SEQRES 21 B 292 VAL GLY TYR GLY PRO PHE VAL MSE ASN THR GLN ALA GLN SEQRES 22 B 292 ILE ALA GLU ALA ILE ALA ASP PHE ASN GLY GLY ARG PHE SEQRES 23 B 292 GLY ASN MSE ASP VAL ALA MODRES 7TE5 MSE A 1 MET MODIFIED RESIDUE MODRES 7TE5 MSE A 25 MET MODIFIED RESIDUE MODRES 7TE5 MSE A 47 MET MODIFIED RESIDUE MODRES 7TE5 MSE A 97 MET MODIFIED RESIDUE MODRES 7TE5 MSE A 122 MET MODIFIED RESIDUE MODRES 7TE5 MSE A 135 MET MODIFIED RESIDUE MODRES 7TE5 MSE A 225 MET MODIFIED RESIDUE MODRES 7TE5 MSE A 265 MET MODIFIED RESIDUE MODRES 7TE5 MSE B 1 MET MODIFIED RESIDUE MODRES 7TE5 MSE B 25 MET MODIFIED RESIDUE MODRES 7TE5 MSE B 47 MET MODIFIED RESIDUE MODRES 7TE5 MSE B 97 MET MODIFIED RESIDUE MODRES 7TE5 MSE B 122 MET MODIFIED RESIDUE MODRES 7TE5 MSE B 135 MET MODIFIED RESIDUE MODRES 7TE5 MSE B 225 MET MODIFIED RESIDUE MODRES 7TE5 MSE B 265 MET MODIFIED RESIDUE HET MSE A 1 16 HET MSE A 25 8 HET MSE A 47 8 HET MSE A 97 8 HET MSE A 122 16 HET MSE A 135 8 HET MSE A 225 8 HET MSE A 265 8 HET MSE B 1 16 HET MSE B 25 8 HET MSE B 47 8 HET MSE B 97 8 HET MSE B 122 8 HET MSE B 135 8 HET MSE B 225 8 HET MSE B 265 8 HET MG A 301 1 HET MG B 301 1 HETNAM MSE SELENOMETHIONINE HETNAM MG MAGNESIUM ION FORMUL 1 MSE 16(C5 H11 N O2 SE) FORMUL 3 MG 2(MG 2+) FORMUL 5 HOH *395(H2 O) HELIX 1 AA1 TYR A 28 SER A 36 1 9 HELIX 2 AA2 SER A 110 GLY A 117 1 8 HELIX 3 AA3 PRO A 130 LYS A 134 5 5 HELIX 4 AA4 ARG A 144 ILE A 148 5 5 HELIX 5 AA5 PRO A 154 ASP A 156 5 3 HELIX 6 AA6 THR A 267 GLY A 281 1 15 HELIX 7 AA7 SER B 110 GLY B 117 1 8 HELIX 8 AA8 PRO B 130 LYS B 134 5 5 HELIX 9 AA9 ARG B 144 ILE B 148 5 5 HELIX 10 AB1 PRO B 154 ASP B 156 5 3 HELIX 11 AB2 ALA B 269 GLY B 281 1 13 SHEET 1 AA1 7 VAL A 4 TYR A 8 0 SHEET 2 AA1 7 GLU A 224 LEU A 228 -1 O LEU A 227 N GLY A 6 SHEET 3 AA1 7 ASN A 202 HIS A 209 -1 N LEU A 205 O VAL A 226 SHEET 4 AA1 7 THR A 243 GLY A 250 -1 O VAL A 244 N LEU A 208 SHEET 5 AA1 7 LEU A 180 LEU A 187 -1 N LEU A 187 O THR A 243 SHEET 6 AA1 7 GLY A 158 ALA A 164 -1 N ARG A 161 O ASP A 184 SHEET 7 AA1 7 GLN A 150 ASN A 152 -1 N VAL A 151 O LEU A 160 SHEET 1 AA2 7 GLN A 13 VAL A 16 0 SHEET 2 AA2 7 PHE A 20 SER A 27 -1 O VAL A 22 N HIS A 14 SHEET 3 AA2 7 PHE A 38 PHE A 49 -1 O LEU A 41 N MSE A 25 SHEET 4 AA2 7 GLY A 118 ASN A 128 -1 O MSE A 122 N ALA A 44 SHEET 5 AA2 7 PHE A 66 HIS A 74 -1 N ILE A 71 O VAL A 123 SHEET 6 AA2 7 VAL A 94 THR A 98 -1 O MSE A 97 N THR A 68 SHEET 7 AA2 7 ALA A 142 ILE A 143 -1 O ILE A 143 N VAL A 94 SHEET 1 AA3 4 GLY A 57 HIS A 63 0 SHEET 2 AA3 4 ILE A 103 HIS A 109 -1 O GLU A 107 N VAL A 58 SHEET 3 AA3 4 VAL A 77 ASP A 81 -1 N GLU A 78 O PHE A 108 SHEET 4 AA3 4 ASN A 85 ILE A 89 -1 O ILE A 89 N VAL A 77 SHEET 1 AA4 2 GLU A 166 TYR A 167 0 SHEET 2 AA4 2 ASN A 170 ILE A 171 -1 O ASN A 170 N TYR A 167 SHEET 1 AA5 4 LYS A 191 SER A 196 0 SHEET 2 AA5 4 HIS A 234 ALA A 239 -1 O LEU A 235 N PHE A 195 SHEET 3 AA5 4 LEU A 212 VAL A 214 -1 N LEU A 213 O GLU A 238 SHEET 4 AA5 4 ALA A 218 ALA A 220 -1 O ALA A 218 N VAL A 214 SHEET 1 AA6 2 VAL A 258 TYR A 260 0 SHEET 2 AA6 2 PHE A 263 MSE A 265 -1 O PHE A 263 N TYR A 260 SHEET 1 AA7 7 VAL B 4 TYR B 8 0 SHEET 2 AA7 7 MSE B 225 LEU B 228 -1 O LEU B 227 N GLY B 6 SHEET 3 AA7 7 ASN B 202 HIS B 209 -1 N LEU B 205 O VAL B 226 SHEET 4 AA7 7 THR B 243 GLY B 250 -1 O LEU B 248 N ALA B 204 SHEET 5 AA7 7 LEU B 180 LEU B 187 -1 N ASN B 181 O SER B 249 SHEET 6 AA7 7 GLY B 158 ALA B 164 -1 N ARG B 161 O ASP B 184 SHEET 7 AA7 7 GLN B 150 ASN B 152 -1 N VAL B 151 O LEU B 160 SHEET 1 AA8 7 HIS B 14 VAL B 16 0 SHEET 2 AA8 7 PHE B 20 SER B 27 -1 O PHE B 20 N VAL B 16 SHEET 3 AA8 7 PHE B 38 PHE B 49 -1 O GLY B 45 N PRO B 21 SHEET 4 AA8 7 GLY B 118 ASN B 128 -1 O GLN B 124 N ASP B 42 SHEET 5 AA8 7 PHE B 66 HIS B 74 -1 N VAL B 69 O LEU B 125 SHEET 6 AA8 7 VAL B 94 THR B 98 -1 O MSE B 97 N THR B 68 SHEET 7 AA8 7 GLY B 139 ILE B 143 -1 O GLY B 139 N THR B 98 SHEET 1 AA9 4 GLY B 57 HIS B 63 0 SHEET 2 AA9 4 ILE B 103 HIS B 109 -1 O HIS B 105 N HIS B 61 SHEET 3 AA9 4 VAL B 77 ASP B 81 -1 N GLU B 78 O PHE B 108 SHEET 4 AA9 4 ILE B 88 ILE B 89 -1 O ILE B 89 N VAL B 77 SHEET 1 AB1 2 GLU B 166 TYR B 167 0 SHEET 2 AB1 2 ASN B 170 ILE B 171 -1 O ASN B 170 N TYR B 167 SHEET 1 AB2 4 SER B 192 SER B 196 0 SHEET 2 AB2 4 HIS B 234 ALA B 239 -1 O LEU B 235 N PHE B 195 SHEET 3 AB2 4 LEU B 212 VAL B 214 -1 N LEU B 213 O GLU B 238 SHEET 4 AB2 4 ALA B 218 ALA B 220 -1 O ALA B 220 N LEU B 212 SHEET 1 AB3 2 VAL B 258 TYR B 260 0 SHEET 2 AB3 2 PHE B 263 MSE B 265 -1 O MSE B 265 N VAL B 258 LINK C ALA A 0 N AMSE A 1 1555 1555 1.33 LINK C ALA A 0 N BMSE A 1 1555 1555 1.33 LINK C AMSE A 1 N LYS A 2 1555 1555 1.33 LINK C BMSE A 1 N LYS A 2 1555 1555 1.33 LINK C SER A 24 N MSE A 25 1555 1555 1.33 LINK C MSE A 25 N PHE A 26 1555 1555 1.33 LINK C PRO A 46 N MSE A 47 1555 1555 1.33 LINK C MSE A 47 N ASP A 48 1555 1555 1.33 LINK C TRP A 96 N MSE A 97 1555 1555 1.33 LINK C MSE A 97 N THR A 98 1555 1555 1.33 LINK C GLU A 121 N AMSE A 122 1555 1555 1.33 LINK C GLU A 121 N BMSE A 122 1555 1555 1.33 LINK C AMSE A 122 N VAL A 123 1555 1555 1.33 LINK C BMSE A 122 N VAL A 123 1555 1555 1.33 LINK C LYS A 134 N MSE A 135 1555 1555 1.33 LINK C MSE A 135 N THR A 136 1555 1555 1.33 LINK C GLU A 224 N MSE A 225 1555 1555 1.33 LINK C MSE A 225 N VAL A 226 1555 1555 1.33 LINK C VAL A 264 N MSE A 265 1555 1555 1.33 LINK C MSE A 265 N ASN A 266 1555 1555 1.33 LINK C ALA B 0 N AMSE B 1 1555 1555 1.33 LINK C ALA B 0 N BMSE B 1 1555 1555 1.33 LINK C AMSE B 1 N LYS B 2 1555 1555 1.33 LINK C BMSE B 1 N LYS B 2 1555 1555 1.33 LINK C SER B 24 N MSE B 25 1555 1555 1.33 LINK C MSE B 25 N PHE B 26 1555 1555 1.33 LINK C PRO B 46 N MSE B 47 1555 1555 1.33 LINK C MSE B 47 N ASP B 48 1555 1555 1.33 LINK C TRP B 96 N MSE B 97 1555 1555 1.33 LINK C MSE B 97 N THR B 98 1555 1555 1.33 LINK C GLU B 121 N MSE B 122 1555 1555 1.33 LINK C MSE B 122 N VAL B 123 1555 1555 1.33 LINK C LYS B 134 N MSE B 135 1555 1555 1.33 LINK C MSE B 135 N THR B 136 1555 1555 1.33 LINK C GLU B 224 N MSE B 225 1555 1555 1.33 LINK C MSE B 225 N VAL B 226 1555 1555 1.33 LINK C VAL B 264 N MSE B 265 1555 1555 1.33 LINK C MSE B 265 N ASN B 266 1555 1555 1.33 LINK MG MG A 301 O HOH A 507 1555 1555 2.97 LINK OE2 GLU B 107 MG MG B 301 1555 1555 2.25 LINK MG MG B 301 O HOH B 426 1555 1555 2.03 CISPEP 1 SER A 36 PRO A 37 0 10.48 CISPEP 2 GLY A 45 PRO A 46 0 1.14 CISPEP 3 SER B 36 PRO B 37 0 9.45 CISPEP 4 GLY B 45 PRO B 46 0 2.26 CRYST1 66.442 66.442 122.546 90.00 90.00 120.00 P 31 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015051 0.008690 0.000000 0.00000 SCALE2 0.000000 0.017379 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008160 0.00000