HEADER IMMUNE SYSTEM/TOXIN 10-JAN-22 7TH2 TITLE SINGLE-DOMAIN VHH INTRABODIES NEUTRALIZE RICIN TOXIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: RICIN A CHAIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: RRNA N-GLYCOSIDASE; COMPND 5 EC: 3.2.2.22; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: VHH ANTIBODY; COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RICINUS COMMUNIS; SOURCE 3 ORGANISM_COMMON: CASTOR BEAN; SOURCE 4 ORGANISM_TAXID: 3988; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: VICUGNA PACOS; SOURCE 10 ORGANISM_TAXID: 30538; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 13 EXPRESSION_SYSTEM_STRAIN: 'BL21-GOLD(DE3)PLYSS AG' KEYWDS ANTIBODY-ANTIGEN COMPLEX, IMMUNE SYSTEM, IMMUNE SYSTEM-TOXIN COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.J.RUDOLPH,N.MANTIS REVDAT 2 18-OCT-23 7TH2 1 REMARK REVDAT 1 12-OCT-22 7TH2 0 JRNL AUTH T.F.CZAJKA,D.J.VANCE,S.DAVIS,M.J.RUDOLPH,N.J.MANTIS JRNL TITL SINGLE-DOMAIN ANTIBODIES NEUTRALIZE RICIN TOXIN JRNL TITL 2 INTRACELLULARLY BY BLOCKING ACCESS TO RIBOSOMAL P-STALK JRNL TITL 3 PROTEINS. JRNL REF J.BIOL.CHEM. V. 298 01742 2022 JRNL REFN ESSN 1083-351X JRNL PMID 35182523 JRNL DOI 10.1016/J.JBC.2022.101742 REMARK 2 REMARK 2 RESOLUTION. 1.84 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.84 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 61585 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.151 REMARK 3 R VALUE (WORKING SET) : 0.149 REMARK 3 FREE R VALUE : 0.187 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.180 REMARK 3 FREE R VALUE TEST SET COUNT : 3189 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.4490 - 5.2242 0.97 2648 125 0.1777 0.2130 REMARK 3 2 5.2242 - 4.1474 0.99 2619 148 0.1269 0.1497 REMARK 3 3 4.1474 - 3.6233 1.00 2619 155 0.1341 0.1800 REMARK 3 4 3.6233 - 3.2921 0.97 2531 153 0.1417 0.1716 REMARK 3 5 3.2921 - 3.0562 0.96 2485 154 0.1532 0.2045 REMARK 3 6 3.0562 - 2.8761 0.99 2590 133 0.1534 0.2049 REMARK 3 7 2.8761 - 2.7320 0.99 2615 128 0.1496 0.1840 REMARK 3 8 2.7320 - 2.6131 0.99 2583 122 0.1505 0.1602 REMARK 3 9 2.6131 - 2.5125 0.99 2578 135 0.1454 0.1769 REMARK 3 10 2.5125 - 2.4258 0.99 2599 128 0.1514 0.2010 REMARK 3 11 2.4258 - 2.3500 0.99 2605 134 0.1454 0.1813 REMARK 3 12 2.3500 - 2.2828 0.95 2434 134 0.1456 0.2017 REMARK 3 13 2.2828 - 2.2227 0.95 2459 151 0.1401 0.1850 REMARK 3 14 2.2227 - 2.1685 0.99 2572 131 0.1455 0.1933 REMARK 3 15 2.1685 - 2.1192 0.98 2561 136 0.1430 0.1695 REMARK 3 16 2.1192 - 2.0741 0.99 2542 136 0.1462 0.1772 REMARK 3 17 2.0741 - 2.0326 0.99 2581 142 0.1531 0.1921 REMARK 3 18 2.0326 - 1.9942 0.98 2555 148 0.1540 0.2416 REMARK 3 19 1.9942 - 1.9586 0.99 2542 122 0.1573 0.1960 REMARK 3 20 1.9586 - 1.9254 0.98 2541 164 0.1543 0.2143 REMARK 3 21 1.9254 - 1.8944 0.98 2539 136 0.1711 0.2234 REMARK 3 22 1.8944 - 1.8652 0.96 2487 147 0.1752 0.2262 REMARK 3 23 1.8652 - 1.8380 0.83 2111 127 0.1929 0.2440 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.890 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6265 REMARK 3 ANGLE : 0.911 8529 REMARK 3 CHIRALITY : 0.054 930 REMARK 3 PLANARITY : 0.007 1117 REMARK 3 DIHEDRAL : 11.040 3726 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 29 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -1 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.6903 -4.0049 82.6405 REMARK 3 T TENSOR REMARK 3 T11: 0.1328 T22: 0.1290 REMARK 3 T33: 0.1480 T12: -0.0071 REMARK 3 T13: -0.0004 T23: 0.0077 REMARK 3 L TENSOR REMARK 3 L11: 1.1228 L22: 1.2748 REMARK 3 L33: 0.5032 L12: -0.6222 REMARK 3 L13: -0.7038 L23: 0.4553 REMARK 3 S TENSOR REMARK 3 S11: 0.0537 S12: -0.1370 S13: 0.1351 REMARK 3 S21: 0.0325 S22: 0.0033 S23: -0.1615 REMARK 3 S31: -0.0862 S32: -0.0635 S33: -0.0340 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 45 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -48.7732 -5.1162 87.9982 REMARK 3 T TENSOR REMARK 3 T11: 0.0859 T22: 0.0754 REMARK 3 T33: 0.1055 T12: 0.0040 REMARK 3 T13: 0.0190 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 4.0950 L22: 2.5261 REMARK 3 L33: 4.7541 L12: 1.7593 REMARK 3 L13: 2.6755 L23: 2.3983 REMARK 3 S TENSOR REMARK 3 S11: -0.0918 S12: -0.0963 S13: 0.2079 REMARK 3 S21: 0.0027 S22: -0.0416 S23: 0.0918 REMARK 3 S31: -0.1794 S32: -0.2184 S33: 0.1443 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 76 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): -55.6487 -7.5955 95.3284 REMARK 3 T TENSOR REMARK 3 T11: 0.1328 T22: 0.1421 REMARK 3 T33: 0.1456 T12: 0.0112 REMARK 3 T13: 0.0328 T23: 0.0146 REMARK 3 L TENSOR REMARK 3 L11: 3.8092 L22: 3.9683 REMARK 3 L33: 2.2253 L12: -0.0946 REMARK 3 L13: -1.1913 L23: 0.3479 REMARK 3 S TENSOR REMARK 3 S11: 0.1319 S12: -0.1450 S13: 0.1804 REMARK 3 S21: 0.3689 S22: -0.0174 S23: 0.2644 REMARK 3 S31: -0.1506 S32: -0.2127 S33: -0.0448 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 123 THROUGH 201 ) REMARK 3 ORIGIN FOR THE GROUP (A): -50.9172 -21.0994 82.6960 REMARK 3 T TENSOR REMARK 3 T11: 0.1299 T22: 0.1281 REMARK 3 T33: 0.1737 T12: -0.0388 REMARK 3 T13: 0.0116 T23: -0.0280 REMARK 3 L TENSOR REMARK 3 L11: 1.9153 L22: 0.8269 REMARK 3 L33: 1.3692 L12: -0.4353 REMARK 3 L13: -0.3028 L23: -0.3037 REMARK 3 S TENSOR REMARK 3 S11: -0.0715 S12: 0.0811 S13: -0.3073 REMARK 3 S21: -0.0547 S22: -0.0219 S23: 0.1537 REMARK 3 S31: 0.2059 S32: -0.2318 S33: 0.1045 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 202 THROUGH 258 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.1585 -22.2008 91.5513 REMARK 3 T TENSOR REMARK 3 T11: 0.1628 T22: 0.1725 REMARK 3 T33: 0.1579 T12: 0.0402 REMARK 3 T13: -0.0034 T23: 0.0510 REMARK 3 L TENSOR REMARK 3 L11: 2.2152 L22: 3.1500 REMARK 3 L33: 2.5735 L12: -0.0014 REMARK 3 L13: 0.3159 L23: 0.4038 REMARK 3 S TENSOR REMARK 3 S11: -0.0966 S12: -0.2580 S13: -0.1828 REMARK 3 S21: 0.2493 S22: 0.0631 S23: -0.1953 REMARK 3 S31: 0.2411 S32: 0.2759 S33: 0.0263 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -1 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.8791 -5.5772 59.5686 REMARK 3 T TENSOR REMARK 3 T11: 0.1304 T22: 0.2013 REMARK 3 T33: 0.1401 T12: 0.0032 REMARK 3 T13: -0.0255 T23: -0.0320 REMARK 3 L TENSOR REMARK 3 L11: 1.3917 L22: 2.7127 REMARK 3 L33: 2.0817 L12: 0.6576 REMARK 3 L13: 0.5469 L23: 1.2997 REMARK 3 S TENSOR REMARK 3 S11: 0.0997 S12: 0.2858 S13: -0.3308 REMARK 3 S21: -0.1396 S22: -0.0747 S23: -0.0249 REMARK 3 S31: 0.0738 S32: -0.3416 S33: -0.0840 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 34 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.6025 -0.2821 45.9103 REMARK 3 T TENSOR REMARK 3 T11: 0.3164 T22: 0.4615 REMARK 3 T33: 0.2876 T12: 0.0155 REMARK 3 T13: 0.0706 T23: -0.0071 REMARK 3 L TENSOR REMARK 3 L11: 4.9537 L22: 3.3430 REMARK 3 L33: 3.1710 L12: 2.4786 REMARK 3 L13: 1.9859 L23: 1.9290 REMARK 3 S TENSOR REMARK 3 S11: -0.0154 S12: 0.4462 S13: -0.4477 REMARK 3 S21: -0.3211 S22: 0.0879 S23: -0.6097 REMARK 3 S31: 0.1396 S32: 0.3566 S33: -0.0611 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 57 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.8446 1.7771 49.2498 REMARK 3 T TENSOR REMARK 3 T11: 0.1818 T22: 0.3609 REMARK 3 T33: 0.1346 T12: 0.0043 REMARK 3 T13: -0.0266 T23: 0.0265 REMARK 3 L TENSOR REMARK 3 L11: 3.3335 L22: 1.7939 REMARK 3 L33: 2.4288 L12: -1.2049 REMARK 3 L13: 0.0220 L23: 0.0630 REMARK 3 S TENSOR REMARK 3 S11: 0.1271 S12: 0.7568 S13: 0.0402 REMARK 3 S21: -0.3616 S22: -0.1121 S23: 0.0761 REMARK 3 S31: 0.1229 S32: -0.1667 S33: 0.0274 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 123 THROUGH 201 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.2865 11.6486 62.2309 REMARK 3 T TENSOR REMARK 3 T11: 0.1618 T22: 0.1473 REMARK 3 T33: 0.2149 T12: 0.0281 REMARK 3 T13: -0.0083 T23: 0.0386 REMARK 3 L TENSOR REMARK 3 L11: 3.1193 L22: 0.7566 REMARK 3 L33: 1.3195 L12: -0.0655 REMARK 3 L13: -0.1222 L23: -0.1783 REMARK 3 S TENSOR REMARK 3 S11: -0.0666 S12: 0.1277 S13: 0.6126 REMARK 3 S21: 0.0384 S22: 0.0582 S23: 0.0282 REMARK 3 S31: -0.1882 S32: -0.2263 S33: 0.0365 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 202 THROUGH 261 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.3666 16.0452 53.8002 REMARK 3 T TENSOR REMARK 3 T11: 0.2421 T22: 0.3373 REMARK 3 T33: 0.4084 T12: -0.0540 REMARK 3 T13: 0.0341 T23: 0.1528 REMARK 3 L TENSOR REMARK 3 L11: 1.7759 L22: 2.2598 REMARK 3 L33: 0.6270 L12: 0.0280 REMARK 3 L13: 1.0859 L23: 0.0843 REMARK 3 S TENSOR REMARK 3 S11: -0.0404 S12: 0.7198 S13: 0.6645 REMARK 3 S21: -0.3650 S22: -0.0325 S23: -0.3901 REMARK 3 S31: -0.2770 S32: 0.3426 S33: -0.0545 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 7 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.9224 -22.6098 60.7330 REMARK 3 T TENSOR REMARK 3 T11: 0.2249 T22: 0.2166 REMARK 3 T33: 0.2443 T12: -0.0463 REMARK 3 T13: -0.0387 T23: -0.1109 REMARK 3 L TENSOR REMARK 3 L11: 2.6811 L22: 5.3129 REMARK 3 L33: 7.1644 L12: 1.7091 REMARK 3 L13: -0.3635 L23: -1.6474 REMARK 3 S TENSOR REMARK 3 S11: -0.0466 S12: 0.7704 S13: -0.2053 REMARK 3 S21: -0.3295 S22: 0.0086 S23: 0.6100 REMARK 3 S31: 0.4763 S32: -0.4213 S33: 0.1512 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 8 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.5574 -17.7044 64.1149 REMARK 3 T TENSOR REMARK 3 T11: 0.1321 T22: 0.1340 REMARK 3 T33: 0.1261 T12: -0.0159 REMARK 3 T13: 0.0233 T23: 0.0162 REMARK 3 L TENSOR REMARK 3 L11: 6.0136 L22: 1.9502 REMARK 3 L33: 3.2897 L12: 0.3264 REMARK 3 L13: 3.0589 L23: 0.6729 REMARK 3 S TENSOR REMARK 3 S11: -0.0579 S12: 0.1994 S13: 0.3509 REMARK 3 S21: -0.1569 S22: -0.0523 S23: -0.0560 REMARK 3 S31: -0.1111 S32: 0.2876 S33: 0.0889 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 26 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.0081 -21.0606 68.4388 REMARK 3 T TENSOR REMARK 3 T11: 0.0986 T22: 0.0692 REMARK 3 T33: 0.1351 T12: -0.0283 REMARK 3 T13: 0.0093 T23: -0.0366 REMARK 3 L TENSOR REMARK 3 L11: 4.5699 L22: 2.7748 REMARK 3 L33: 4.9347 L12: -2.1428 REMARK 3 L13: 1.3626 L23: -1.4372 REMARK 3 S TENSOR REMARK 3 S11: 0.0022 S12: -0.1395 S13: -0.3004 REMARK 3 S21: -0.0447 S22: 0.0636 S23: 0.3307 REMARK 3 S31: -0.0984 S32: -0.3396 S33: -0.0518 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 39 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.7038 -28.7045 73.2186 REMARK 3 T TENSOR REMARK 3 T11: 0.2687 T22: 0.1333 REMARK 3 T33: 0.2497 T12: 0.0689 REMARK 3 T13: 0.0198 T23: 0.0149 REMARK 3 L TENSOR REMARK 3 L11: 3.7120 L22: 6.0327 REMARK 3 L33: 3.2287 L12: -3.3650 REMARK 3 L13: -2.9663 L23: 4.2555 REMARK 3 S TENSOR REMARK 3 S11: -0.1692 S12: -0.3274 S13: -0.4602 REMARK 3 S21: 0.0331 S22: 0.0649 S23: 0.0309 REMARK 3 S31: 0.6313 S32: 0.4092 S33: 0.0124 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 51 THROUGH 63 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.4373 -17.5145 78.8197 REMARK 3 T TENSOR REMARK 3 T11: 0.1311 T22: 0.1066 REMARK 3 T33: 0.1413 T12: -0.0178 REMARK 3 T13: 0.0226 T23: -0.0021 REMARK 3 L TENSOR REMARK 3 L11: 2.8401 L22: 8.0065 REMARK 3 L33: 5.8577 L12: -4.5633 REMARK 3 L13: -0.1469 L23: 0.1373 REMARK 3 S TENSOR REMARK 3 S11: -0.0182 S12: -0.3355 S13: 0.0483 REMARK 3 S21: 0.1396 S22: 0.0718 S23: 0.1427 REMARK 3 S31: -0.0347 S32: 0.2702 S33: -0.0739 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 64 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.0144 -13.9109 69.8358 REMARK 3 T TENSOR REMARK 3 T11: 0.1100 T22: 0.1052 REMARK 3 T33: 0.1125 T12: -0.0250 REMARK 3 T13: 0.0220 T23: -0.0175 REMARK 3 L TENSOR REMARK 3 L11: 7.6300 L22: 4.0383 REMARK 3 L33: 7.8480 L12: -3.8993 REMARK 3 L13: 6.5928 L23: -2.8316 REMARK 3 S TENSOR REMARK 3 S11: -0.1111 S12: -0.0131 S13: 0.0559 REMARK 3 S21: 0.0142 S22: 0.1459 S23: -0.0305 REMARK 3 S31: -0.2330 S32: 0.0086 S33: 0.0197 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 83 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.0443 -24.7141 72.8829 REMARK 3 T TENSOR REMARK 3 T11: 0.1414 T22: 0.0793 REMARK 3 T33: 0.1479 T12: 0.0288 REMARK 3 T13: 0.0078 T23: 0.0042 REMARK 3 L TENSOR REMARK 3 L11: 5.9405 L22: 0.8319 REMARK 3 L33: 1.0883 L12: 1.4683 REMARK 3 L13: -1.2146 L23: 0.1155 REMARK 3 S TENSOR REMARK 3 S11: -0.0468 S12: -0.0962 S13: -0.1809 REMARK 3 S21: 0.1440 S22: 0.0514 S23: -0.0331 REMARK 3 S31: 0.0185 S32: 0.1007 S33: 0.0275 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 108 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.0858 -28.9834 68.1712 REMARK 3 T TENSOR REMARK 3 T11: 0.1517 T22: 0.1022 REMARK 3 T33: 0.2617 T12: -0.0376 REMARK 3 T13: 0.0186 T23: -0.0668 REMARK 3 L TENSOR REMARK 3 L11: 5.6773 L22: 5.8712 REMARK 3 L33: 8.0879 L12: 0.2087 REMARK 3 L13: -0.9773 L23: -0.1126 REMARK 3 S TENSOR REMARK 3 S11: -0.0962 S12: 0.0849 S13: -0.6238 REMARK 3 S21: 0.0759 S22: 0.0668 S23: 0.5316 REMARK 3 S31: 0.6126 S32: -0.5084 S33: 0.1635 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 118 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.5305 -23.1637 64.7216 REMARK 3 T TENSOR REMARK 3 T11: 0.1783 T22: 0.4138 REMARK 3 T33: 0.2745 T12: -0.0176 REMARK 3 T13: 0.0134 T23: -0.0604 REMARK 3 L TENSOR REMARK 3 L11: 1.9900 L22: 4.5754 REMARK 3 L33: 2.9645 L12: -0.3685 REMARK 3 L13: -2.2534 L23: -0.9257 REMARK 3 S TENSOR REMARK 3 S11: -0.2948 S12: 0.6713 S13: -0.6865 REMARK 3 S21: 0.1440 S22: 0.1761 S23: -0.6754 REMARK 3 S31: -0.0362 S32: 0.9418 S33: 0.1209 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 3 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.9289 3.3200 79.4443 REMARK 3 T TENSOR REMARK 3 T11: 0.1314 T22: 0.1054 REMARK 3 T33: 0.1123 T12: -0.0049 REMARK 3 T13: -0.0100 T23: 0.0222 REMARK 3 L TENSOR REMARK 3 L11: 5.1629 L22: 4.0811 REMARK 3 L33: 4.3497 L12: -0.2480 REMARK 3 L13: 0.7971 L23: -0.0480 REMARK 3 S TENSOR REMARK 3 S11: -0.0982 S12: -0.0098 S13: -0.2699 REMARK 3 S21: 0.1183 S22: 0.0225 S23: 0.2026 REMARK 3 S31: 0.1582 S32: -0.1221 S33: 0.0959 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 25 THROUGH 31 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.4369 2.3117 77.1874 REMARK 3 T TENSOR REMARK 3 T11: 0.2955 T22: 0.5147 REMARK 3 T33: 0.3450 T12: -0.1576 REMARK 3 T13: -0.0431 T23: 0.0960 REMARK 3 L TENSOR REMARK 3 L11: 0.8510 L22: 3.8256 REMARK 3 L33: 3.5656 L12: -0.7931 REMARK 3 L13: -0.8712 L23: -2.0538 REMARK 3 S TENSOR REMARK 3 S11: 0.7068 S12: -1.7770 S13: -0.8727 REMARK 3 S21: 0.7740 S22: -0.6761 S23: 0.3155 REMARK 3 S31: 0.5797 S32: -0.5155 S33: -0.2132 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 32 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.4296 11.8293 75.1715 REMARK 3 T TENSOR REMARK 3 T11: 0.1186 T22: 0.0792 REMARK 3 T33: 0.1705 T12: 0.0093 REMARK 3 T13: -0.0191 T23: -0.0242 REMARK 3 L TENSOR REMARK 3 L11: 5.7779 L22: 5.9073 REMARK 3 L33: 2.0766 L12: 4.0792 REMARK 3 L13: 1.5317 L23: 0.3836 REMARK 3 S TENSOR REMARK 3 S11: -0.1210 S12: -0.2320 S13: 0.8209 REMARK 3 S21: 0.2697 S22: -0.1260 S23: 0.2193 REMARK 3 S31: -0.0896 S32: -0.0744 S33: 0.1139 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 39 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.0195 16.1299 73.9507 REMARK 3 T TENSOR REMARK 3 T11: 0.3212 T22: 0.1496 REMARK 3 T33: 0.4769 T12: -0.0588 REMARK 3 T13: -0.1273 T23: -0.0324 REMARK 3 L TENSOR REMARK 3 L11: 1.7306 L22: 1.9683 REMARK 3 L33: 6.0188 L12: 1.8105 REMARK 3 L13: 3.2255 L23: 3.3742 REMARK 3 S TENSOR REMARK 3 S11: -0.3045 S12: -0.1669 S13: 0.8278 REMARK 3 S21: -0.0611 S22: -0.3214 S23: -0.1100 REMARK 3 S31: -0.9087 S32: 0.0591 S33: 0.3596 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 51 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.1906 7.5657 64.6763 REMARK 3 T TENSOR REMARK 3 T11: 0.1437 T22: 0.1526 REMARK 3 T33: 0.1732 T12: 0.0029 REMARK 3 T13: -0.0113 T23: 0.0311 REMARK 3 L TENSOR REMARK 3 L11: 5.5764 L22: 1.6107 REMARK 3 L33: 3.2581 L12: 0.7322 REMARK 3 L13: 2.3563 L23: 0.8820 REMARK 3 S TENSOR REMARK 3 S11: -0.0784 S12: 0.4621 S13: 0.2175 REMARK 3 S21: 0.0116 S22: -0.0260 S23: 0.0273 REMARK 3 S31: -0.0834 S32: 0.2653 S33: 0.0713 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 67 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.7006 -0.1021 72.9333 REMARK 3 T TENSOR REMARK 3 T11: 0.2244 T22: 0.1705 REMARK 3 T33: 0.2355 T12: -0.0237 REMARK 3 T13: -0.0288 T23: 0.0176 REMARK 3 L TENSOR REMARK 3 L11: 4.4166 L22: 1.9463 REMARK 3 L33: 6.4032 L12: -1.2697 REMARK 3 L13: -1.3313 L23: -1.2765 REMARK 3 S TENSOR REMARK 3 S11: 0.0949 S12: 0.0008 S13: -0.4521 REMARK 3 S21: -0.0440 S22: 0.0653 S23: 0.1999 REMARK 3 S31: 0.6277 S32: -0.3070 S33: 0.0039 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 83 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.1001 10.3253 75.5217 REMARK 3 T TENSOR REMARK 3 T11: 0.1507 T22: 0.1060 REMARK 3 T33: 0.1588 T12: -0.0233 REMARK 3 T13: -0.0064 T23: 0.0178 REMARK 3 L TENSOR REMARK 3 L11: 7.6703 L22: 1.5275 REMARK 3 L33: 2.3566 L12: -1.6336 REMARK 3 L13: 0.4449 L23: 1.0782 REMARK 3 S TENSOR REMARK 3 S11: -0.1099 S12: -0.1284 S13: 0.3604 REMARK 3 S21: -0.0323 S22: 0.0227 S23: -0.1106 REMARK 3 S31: -0.0932 S32: 0.1800 S33: 0.0851 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 99 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.2288 15.2886 68.0047 REMARK 3 T TENSOR REMARK 3 T11: 0.1870 T22: 0.1184 REMARK 3 T33: 0.2598 T12: 0.0222 REMARK 3 T13: -0.0671 T23: -0.0098 REMARK 3 L TENSOR REMARK 3 L11: 6.9040 L22: 2.9856 REMARK 3 L33: 4.9705 L12: -0.3996 REMARK 3 L13: -0.7237 L23: -1.8187 REMARK 3 S TENSOR REMARK 3 S11: -0.1839 S12: 0.0424 S13: 0.6686 REMARK 3 S21: -0.1887 S22: -0.1846 S23: -0.1064 REMARK 3 S31: -0.2716 S32: 0.1050 S33: 0.2806 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 108 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.1755 14.5854 78.6472 REMARK 3 T TENSOR REMARK 3 T11: 0.1999 T22: 0.2768 REMARK 3 T33: 0.2518 T12: 0.0710 REMARK 3 T13: -0.0267 T23: -0.1222 REMARK 3 L TENSOR REMARK 3 L11: 2.8304 L22: 4.0405 REMARK 3 L33: 2.3304 L12: 0.2888 REMARK 3 L13: -0.9674 L23: 2.2511 REMARK 3 S TENSOR REMARK 3 S11: -0.2135 S12: -0.7053 S13: 0.3131 REMARK 3 S21: 0.1159 S22: -0.0933 S23: 0.3190 REMARK 3 S31: -0.7524 S32: -0.5813 S33: -0.1419 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 118 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.4314 8.9493 81.2352 REMARK 3 T TENSOR REMARK 3 T11: 0.1182 T22: 0.2124 REMARK 3 T33: 0.1578 T12: 0.0037 REMARK 3 T13: -0.0289 T23: -0.0195 REMARK 3 L TENSOR REMARK 3 L11: 4.5473 L22: 7.5910 REMARK 3 L33: 6.2391 L12: -0.6019 REMARK 3 L13: -1.3681 L23: -0.5480 REMARK 3 S TENSOR REMARK 3 S11: -0.1948 S12: -0.5775 S13: 0.4621 REMARK 3 S21: -0.0751 S22: 0.1361 S23: -0.4727 REMARK 3 S31: 0.0557 S32: 0.8954 S33: 0.0372 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID -1 THROUGH 84 OR REMARK 3 RESID 86 THROUGH 123 OR RESID 125 THROUGH REMARK 3 158 OR RESID 160 THROUGH 258)) REMARK 3 SELECTION : (CHAIN B AND (RESID -1 THROUGH 84 OR REMARK 3 RESID 86 THROUGH 123 OR RESID 125 THROUGH REMARK 3 158 OR RESID 160 THROUGH 258)) REMARK 3 ATOM PAIRS NUMBER : 3116 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN C AND (RESID 3 THROUGH 48 OR RESID REMARK 3 50 THROUGH 104 OR RESID 106 THROUGH 124)) REMARK 3 SELECTION : (CHAIN D AND (RESID 3 THROUGH 48 OR RESID REMARK 3 50 THROUGH 104 OR RESID 106 THROUGH 124)) REMARK 3 ATOM PAIRS NUMBER : 1354 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7TH2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1000262287. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61630 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.830 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : 0.11500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.90700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1RTC, 4LGR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES PH 6.5, 200 MM SODIUM REMARK 280 THIOCYANATE, 8% DIOXANE, 1740 MM AMMONIUM SULFATE, VAPOR REMARK 280 DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.90600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -115.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17680 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -104.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS A 259 REMARK 465 ALA A 260 REMARK 465 PRO A 261 REMARK 465 PRO A 262 REMARK 465 PRO A 263 REMARK 465 SER A 264 REMARK 465 SER A 265 REMARK 465 GLN A 266 REMARK 465 PHE A 267 REMARK 465 PRO B 262 REMARK 465 PRO B 263 REMARK 465 SER B 264 REMARK 465 SER B 265 REMARK 465 GLN B 266 REMARK 465 PHE B 267 REMARK 465 PRO C 129 REMARK 465 LYS C 130 REMARK 465 PRO C 131 REMARK 465 GLN C 132 REMARK 465 GLN D 1 REMARK 465 VAL D 2 REMARK 465 GLU D 125 REMARK 465 PRO D 126 REMARK 465 LYS D 127 REMARK 465 THR D 128 REMARK 465 PRO D 129 REMARK 465 LYS D 130 REMARK 465 PRO D 131 REMARK 465 GLN D 132 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR B 33 HG1 THR B 34 1.35 REMARK 500 HH22 ARG A 31 O HOH A 403 1.48 REMARK 500 HE21 GLN C 3 O HOH C 303 1.50 REMARK 500 OE1 GLU B 61 O HOH B 401 1.91 REMARK 500 O HOH B 515 O HOH B 546 1.98 REMARK 500 CL CL A 309 O HOH A 540 1.99 REMARK 500 O HOH D 357 O HOH D 373 2.00 REMARK 500 O HOH A 554 O HOH A 582 2.02 REMARK 500 OE1 GLU A 61 O HOH A 401 2.03 REMARK 500 O HOH B 523 O HOH D 389 2.03 REMARK 500 O HOH B 529 O HOH B 532 2.03 REMARK 500 O HOH C 410 O HOH C 416 2.03 REMARK 500 O HOH B 447 O HOH B 523 2.04 REMARK 500 OD2 ASP A 244 O HOH A 402 2.05 REMARK 500 NH2 ARG A 31 O HOH A 403 2.07 REMARK 500 OD2 ASP D 112 O HOH D 301 2.08 REMARK 500 NH2 ARG B 166 O HOH B 402 2.10 REMARK 500 OD2 ASP C 112 O HOH C 301 2.10 REMARK 500 O HOH B 445 O HOH B 470 2.13 REMARK 500 O HOH A 513 O HOH A 547 2.16 REMARK 500 O HOH C 372 O HOH C 395 2.18 REMARK 500 OD1 ASP D 99 O HOH D 302 2.18 REMARK 500 O HOH A 453 O HOH A 491 2.19 REMARK 500 O HOH D 302 O HOH D 351 2.19 REMARK 500 O HOH B 521 O HOH C 362 2.19 REMARK 500 O THR A 156 O HOH A 404 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HD21 ASN A 122 OE1 GLN D 116 2547 1.58 REMARK 500 CL CL D 201 O HOH A 551 2557 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 34 -11.60 90.53 REMARK 500 ALA C 91 169.73 178.86 REMARK 500 ALA D 91 167.95 178.55 REMARK 500 REMARK 500 REMARK: NULL DBREF 7TH2 A 1 267 UNP P02879 RICI_RICCO 36 302 DBREF 7TH2 B 1 267 UNP P02879 RICI_RICCO 36 302 DBREF 7TH2 C 1 132 PDB 7TH2 7TH2 1 132 DBREF 7TH2 D 1 132 PDB 7TH2 7TH2 1 132 SEQADV 7TH2 ALA A -1 UNP P02879 EXPRESSION TAG SEQADV 7TH2 MET A 0 UNP P02879 EXPRESSION TAG SEQADV 7TH2 ALA B -1 UNP P02879 EXPRESSION TAG SEQADV 7TH2 MET B 0 UNP P02879 EXPRESSION TAG SEQRES 1 A 269 ALA MET ILE PHE PRO LYS GLN TYR PRO ILE ILE ASN PHE SEQRES 2 A 269 THR THR ALA GLY ALA THR VAL GLN SER TYR THR ASN PHE SEQRES 3 A 269 ILE ARG ALA VAL ARG GLY ARG LEU THR THR GLY ALA ASP SEQRES 4 A 269 VAL ARG HIS GLU ILE PRO VAL LEU PRO ASN ARG VAL GLY SEQRES 5 A 269 LEU PRO ILE ASN GLN ARG PHE ILE LEU VAL GLU LEU SER SEQRES 6 A 269 ASN HIS ALA GLU LEU SER VAL THR LEU ALA LEU ASP VAL SEQRES 7 A 269 THR ASN ALA TYR VAL VAL GLY TYR ARG ALA GLY ASN SER SEQRES 8 A 269 ALA TYR PHE PHE HIS PRO ASP ASN GLN GLU ASP ALA GLU SEQRES 9 A 269 ALA ILE THR HIS LEU PHE THR ASP VAL GLN ASN ARG TYR SEQRES 10 A 269 THR PHE ALA PHE GLY GLY ASN TYR ASP ARG LEU GLU GLN SEQRES 11 A 269 LEU ALA GLY ASN LEU ARG GLU ASN ILE GLU LEU GLY ASN SEQRES 12 A 269 GLY PRO LEU GLU GLU ALA ILE SER ALA LEU TYR TYR TYR SEQRES 13 A 269 SER THR GLY GLY THR GLN LEU PRO THR LEU ALA ARG SER SEQRES 14 A 269 PHE ILE ILE CYS ILE GLN MET ILE SER GLU ALA ALA ARG SEQRES 15 A 269 PHE GLN TYR ILE GLU GLY GLU MET ARG THR ARG ILE ARG SEQRES 16 A 269 TYR ASN ARG ARG SER ALA PRO ASP PRO SER VAL ILE THR SEQRES 17 A 269 LEU GLU ASN SER TRP GLY ARG LEU SER THR ALA ILE GLN SEQRES 18 A 269 GLU SER ASN GLN GLY ALA PHE ALA SER PRO ILE GLN LEU SEQRES 19 A 269 GLN ARG ARG ASN GLY SER LYS PHE SER VAL TYR ASP VAL SEQRES 20 A 269 SER ILE LEU ILE PRO ILE ILE ALA LEU MET VAL TYR ARG SEQRES 21 A 269 CYS ALA PRO PRO PRO SER SER GLN PHE SEQRES 1 B 269 ALA MET ILE PHE PRO LYS GLN TYR PRO ILE ILE ASN PHE SEQRES 2 B 269 THR THR ALA GLY ALA THR VAL GLN SER TYR THR ASN PHE SEQRES 3 B 269 ILE ARG ALA VAL ARG GLY ARG LEU THR THR GLY ALA ASP SEQRES 4 B 269 VAL ARG HIS GLU ILE PRO VAL LEU PRO ASN ARG VAL GLY SEQRES 5 B 269 LEU PRO ILE ASN GLN ARG PHE ILE LEU VAL GLU LEU SER SEQRES 6 B 269 ASN HIS ALA GLU LEU SER VAL THR LEU ALA LEU ASP VAL SEQRES 7 B 269 THR ASN ALA TYR VAL VAL GLY TYR ARG ALA GLY ASN SER SEQRES 8 B 269 ALA TYR PHE PHE HIS PRO ASP ASN GLN GLU ASP ALA GLU SEQRES 9 B 269 ALA ILE THR HIS LEU PHE THR ASP VAL GLN ASN ARG TYR SEQRES 10 B 269 THR PHE ALA PHE GLY GLY ASN TYR ASP ARG LEU GLU GLN SEQRES 11 B 269 LEU ALA GLY ASN LEU ARG GLU ASN ILE GLU LEU GLY ASN SEQRES 12 B 269 GLY PRO LEU GLU GLU ALA ILE SER ALA LEU TYR TYR TYR SEQRES 13 B 269 SER THR GLY GLY THR GLN LEU PRO THR LEU ALA ARG SER SEQRES 14 B 269 PHE ILE ILE CYS ILE GLN MET ILE SER GLU ALA ALA ARG SEQRES 15 B 269 PHE GLN TYR ILE GLU GLY GLU MET ARG THR ARG ILE ARG SEQRES 16 B 269 TYR ASN ARG ARG SER ALA PRO ASP PRO SER VAL ILE THR SEQRES 17 B 269 LEU GLU ASN SER TRP GLY ARG LEU SER THR ALA ILE GLN SEQRES 18 B 269 GLU SER ASN GLN GLY ALA PHE ALA SER PRO ILE GLN LEU SEQRES 19 B 269 GLN ARG ARG ASN GLY SER LYS PHE SER VAL TYR ASP VAL SEQRES 20 B 269 SER ILE LEU ILE PRO ILE ILE ALA LEU MET VAL TYR ARG SEQRES 21 B 269 CYS ALA PRO PRO PRO SER SER GLN PHE SEQRES 1 C 132 GLN VAL GLN LEU ALA GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 C 132 PRO GLY GLY SER LEU ARG LEU SER CYS VAL ALA SER PRO SEQRES 3 C 132 SER LEU ASP TYR TYR GLY ILE GLY TRP PHE ARG GLN ALA SEQRES 4 C 132 PRO GLY LYS GLU ARG GLU GLY VAL SER CYS ILE THR GLY SEQRES 5 C 132 SER GLU GLY SER THR TYR TYR ALA ASP SER VAL LYS GLY SEQRES 6 C 132 ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR VAL SEQRES 7 C 132 PHE LEU GLN MET ASP SER LEU LYS PRO GLU ASP THR ALA SEQRES 8 C 132 VAL TYR TYR CYS ALA ALA ALA ASP PRO LEU PRO LEU VAL SEQRES 9 C 132 CYS THR TRP GLY ASP GLU TYR ASP TYR TRP GLY GLN GLY SEQRES 10 C 132 THR GLN VAL THR VAL SER SER GLU PRO LYS THR PRO LYS SEQRES 11 C 132 PRO GLN SEQRES 1 D 132 GLN VAL GLN LEU ALA GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 D 132 PRO GLY GLY SER LEU ARG LEU SER CYS VAL ALA SER PRO SEQRES 3 D 132 SER LEU ASP TYR TYR GLY ILE GLY TRP PHE ARG GLN ALA SEQRES 4 D 132 PRO GLY LYS GLU ARG GLU GLY VAL SER CYS ILE THR GLY SEQRES 5 D 132 SER GLU GLY SER THR TYR TYR ALA ASP SER VAL LYS GLY SEQRES 6 D 132 ARG PHE THR ILE SER ARG ASP ASN ALA LYS ASN THR VAL SEQRES 7 D 132 PHE LEU GLN MET ASP SER LEU LYS PRO GLU ASP THR ALA SEQRES 8 D 132 VAL TYR TYR CYS ALA ALA ALA ASP PRO LEU PRO LEU VAL SEQRES 9 D 132 CYS THR TRP GLY ASP GLU TYR ASP TYR TRP GLY GLN GLY SEQRES 10 D 132 THR GLN VAL THR VAL SER SER GLU PRO LYS THR PRO LYS SEQRES 11 D 132 PRO GLN HET CL A 301 1 HET CL A 302 1 HET CL A 303 1 HET CL A 304 1 HET CL A 305 1 HET CL A 306 1 HET CL A 307 1 HET CL A 308 1 HET CL A 309 1 HET MES A 310 25 HET CL B 301 1 HET CL B 302 1 HET CL B 303 1 HET CL B 304 1 HET CL B 305 1 HET CL B 306 1 HET CL B 307 1 HET CL B 308 1 HET CL B 309 1 HET SO4 B 310 5 HET SO4 B 311 5 HET MES B 312 25 HET CL C 201 1 HET CL C 202 1 HET SO4 C 203 5 HET CL D 201 1 HET EDO D 202 10 HET EDO D 203 10 HETNAM CL CHLORIDE ION HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 5 CL 21(CL 1-) FORMUL 14 MES 2(C6 H13 N O4 S) FORMUL 24 SO4 3(O4 S 2-) FORMUL 31 EDO 2(C2 H6 O2) FORMUL 33 HOH *542(H2 O) HELIX 1 AA1 THR A 17 THR A 33 1 17 HELIX 2 AA2 PRO A 52 GLN A 55 5 4 HELIX 3 AA3 ASN A 97 THR A 105 1 9 HELIX 4 AA4 ASN A 122 GLY A 131 1 10 HELIX 5 AA5 LEU A 133 ILE A 137 5 5 HELIX 6 AA6 GLY A 140 TYR A 154 1 15 HELIX 7 AA7 SER A 155 GLY A 157 5 3 HELIX 8 AA8 GLN A 160 PHE A 181 1 22 HELIX 9 AA9 PHE A 181 ASN A 195 1 15 HELIX 10 AB1 ASP A 201 SER A 221 1 21 HELIX 11 AB2 VAL A 245 ILE A 249 1 5 HELIX 12 AB3 THR B 17 THR B 33 1 17 HELIX 13 AB4 PRO B 52 GLN B 55 5 4 HELIX 14 AB5 ASN B 97 THR B 105 1 9 HELIX 15 AB6 ASN B 122 GLY B 131 1 10 HELIX 16 AB7 LEU B 133 ILE B 137 5 5 HELIX 17 AB8 GLY B 140 SER B 155 1 16 HELIX 18 AB9 GLN B 160 PHE B 181 1 22 HELIX 19 AC1 PHE B 181 ASN B 195 1 15 HELIX 20 AC2 ASP B 201 SER B 221 1 21 HELIX 21 AC3 VAL B 245 ILE B 249 1 5 HELIX 22 AC4 ASP C 61 LYS C 64 5 4 HELIX 23 AC5 LYS C 86 THR C 90 5 5 HELIX 24 AC6 TRP C 107 TYR C 111 5 5 HELIX 25 AC7 ASP D 61 LYS D 64 5 4 HELIX 26 AC8 ASN D 73 LYS D 75 5 3 HELIX 27 AC9 LYS D 86 THR D 90 5 5 HELIX 28 AD1 TRP D 107 TYR D 111 5 5 SHEET 1 AA1 6 ILE A 8 THR A 12 0 SHEET 2 AA1 6 PHE A 57 SER A 63 1 O LEU A 59 N ILE A 9 SHEET 3 AA1 6 SER A 69 ASP A 75 -1 O VAL A 70 N LEU A 62 SHEET 4 AA1 6 VAL A 81 ALA A 86 -1 O VAL A 82 N ALA A 73 SHEET 5 AA1 6 SER A 89 PHE A 92 -1 O TYR A 91 N TYR A 84 SHEET 6 AA1 6 ASN A 113 THR A 116 1 O ASN A 113 N ALA A 90 SHEET 1 AA2 2 ASP A 37 ARG A 39 0 SHEET 2 AA2 2 ILE A 42 VAL A 44 -1 O VAL A 44 N ASP A 37 SHEET 1 AA3 2 ALA A 225 GLN A 233 0 SHEET 2 AA3 2 LYS A 239 ASP A 244 -1 O TYR A 243 N PHE A 226 SHEET 1 AA4 6 ILE B 8 THR B 12 0 SHEET 2 AA4 6 PHE B 57 SER B 63 1 O LEU B 59 N ILE B 9 SHEET 3 AA4 6 SER B 69 ASP B 75 -1 O VAL B 70 N LEU B 62 SHEET 4 AA4 6 VAL B 81 ALA B 86 -1 O ARG B 85 N THR B 71 SHEET 5 AA4 6 SER B 89 PHE B 92 -1 O TYR B 91 N TYR B 84 SHEET 6 AA4 6 ASN B 113 THR B 116 1 O ASN B 113 N ALA B 90 SHEET 1 AA5 2 VAL B 38 ARG B 39 0 SHEET 2 AA5 2 ILE B 42 PRO B 43 -1 O ILE B 42 N ARG B 39 SHEET 1 AA6 2 ALA B 225 GLN B 233 0 SHEET 2 AA6 2 LYS B 239 ASP B 244 -1 O PHE B 240 N LEU B 232 SHEET 1 AA7 4 GLN C 3 SER C 7 0 SHEET 2 AA7 4 LEU C 18 SER C 25 -1 O SER C 25 N GLN C 3 SHEET 3 AA7 4 THR C 77 MET C 82 -1 O MET C 82 N LEU C 18 SHEET 4 AA7 4 PHE C 67 ASP C 72 -1 N THR C 68 O GLN C 81 SHEET 1 AA8 6 GLY C 10 VAL C 12 0 SHEET 2 AA8 6 THR C 118 VAL C 122 1 O THR C 121 N GLY C 10 SHEET 3 AA8 6 ALA C 91 ALA C 98 -1 N TYR C 93 O THR C 118 SHEET 4 AA8 6 GLY C 32 GLN C 38 -1 N PHE C 36 O TYR C 94 SHEET 5 AA8 6 GLU C 45 ILE C 50 -1 O SER C 48 N TRP C 35 SHEET 6 AA8 6 THR C 57 TYR C 59 -1 O TYR C 58 N CYS C 49 SHEET 1 AA9 4 GLY C 10 VAL C 12 0 SHEET 2 AA9 4 THR C 118 VAL C 122 1 O THR C 121 N GLY C 10 SHEET 3 AA9 4 ALA C 91 ALA C 98 -1 N TYR C 93 O THR C 118 SHEET 4 AA9 4 TYR C 113 TRP C 114 -1 O TYR C 113 N ALA C 97 SHEET 1 AB1 4 LEU D 4 SER D 7 0 SHEET 2 AB1 4 LEU D 18 ALA D 24 -1 O SER D 21 N SER D 7 SHEET 3 AB1 4 THR D 77 MET D 82 -1 O MET D 82 N LEU D 18 SHEET 4 AB1 4 PHE D 67 ASP D 72 -1 N THR D 68 O GLN D 81 SHEET 1 AB2 6 LEU D 11 VAL D 12 0 SHEET 2 AB2 6 THR D 118 VAL D 122 1 O THR D 121 N VAL D 12 SHEET 3 AB2 6 ALA D 91 ALA D 98 -1 N TYR D 93 O THR D 118 SHEET 4 AB2 6 GLY D 32 GLN D 38 -1 N PHE D 36 O TYR D 94 SHEET 5 AB2 6 GLU D 45 ILE D 50 -1 O SER D 48 N TRP D 35 SHEET 6 AB2 6 THR D 57 TYR D 59 -1 O TYR D 58 N CYS D 49 SHEET 1 AB3 4 LEU D 11 VAL D 12 0 SHEET 2 AB3 4 THR D 118 VAL D 122 1 O THR D 121 N VAL D 12 SHEET 3 AB3 4 ALA D 91 ALA D 98 -1 N TYR D 93 O THR D 118 SHEET 4 AB3 4 TYR D 113 TRP D 114 -1 O TYR D 113 N ALA D 97 SSBOND 1 CYS C 22 CYS C 95 1555 1555 2.06 SSBOND 2 CYS C 49 CYS C 105 1555 1555 2.04 SSBOND 3 CYS D 22 CYS D 95 1555 1555 2.07 SSBOND 4 CYS D 49 CYS D 105 1555 1555 2.05 CISPEP 1 SER C 25 PRO C 26 0 0.01 CISPEP 2 ASP C 99 PRO C 100 0 -1.56 CISPEP 3 SER D 25 PRO D 26 0 -1.26 CISPEP 4 ASP D 99 PRO D 100 0 -3.03 CRYST1 60.644 63.812 99.298 90.00 107.12 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016490 0.000000 0.005079 0.00000 SCALE2 0.000000 0.015671 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010538 0.00000