HEADER VIRAL PROTEIN 13-JAN-22 7TI9 TITLE CRYSTAL STRUCTURE OF THE UBIQUITIN-LIKE DOMAIN 1 (UBL1) OF NSP3 FROM TITLE 2 SARS-COV-2, FORM 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PAPAIN-LIKE PROTEASE NSP3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UBIQUITIN-LIKE DOMAIN 1 (UBL1); COMPND 5 SYNONYM: NON-STRUCTURAL PROTEIN 3, NSP3, PL2-PRO, PAPAIN-LIKE COMPND 6 PROTEINASE, PL-PRO; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_COMMON: 2019-NCOV, SARS-COV-2; SOURCE 5 ORGANISM_TAXID: 2697049; SOURCE 6 GENE: REP, 1A-1B; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_VARIANT: -GOLD; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS VIRAL PROTEIN, SARS-COV-2, NON-STRUCTURAL PROTEIN, NSP3, UBIQUITIN- KEYWDS 2 LIKE DOMAIN, STRUCTURAL GENOMICS, CENTER FOR STRUCTURAL GENOMICS OF KEYWDS 3 INFECTIOUS DISEASES, CSGID, NATIONAL INSTITUTE OF ALLERGY AND KEYWDS 4 INFECTIOUS DISEASES, NIAID EXPDTA X-RAY DIFFRACTION AUTHOR P.J.STOGIOS,T.SKARINA,R.DI LEO,A.SAVCHENKO,A.JOACHIMIAK, AUTHOR 2 K.J.F.SATCHELL,CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES AUTHOR 3 (CSGID) REVDAT 2 18-OCT-23 7TI9 1 REMARK REVDAT 1 26-JAN-22 7TI9 0 JRNL AUTH P.J.STOGIOS JRNL TITL CRYSTAL STRUCTURE OF THE UBIQUITIN-LIKE DOMAIN 1 (UBL1) OF JRNL TITL 2 NSP3 FROM SARS-COV-2, FORM 2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.73 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20_4459 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.73 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.91 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 9242 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.223 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 463 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.9100 - 3.9200 1.00 3072 163 0.1871 0.2064 REMARK 3 2 3.9200 - 3.1100 1.00 2956 155 0.2569 0.2795 REMARK 3 3 3.1100 - 2.7300 0.94 2751 145 0.3208 0.3974 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.486 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.872 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 68.97 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 83.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 908 REMARK 3 ANGLE : 0.502 1233 REMARK 3 CHIRALITY : 0.042 141 REMARK 3 PLANARITY : 0.003 157 REMARK 3 DIHEDRAL : 19.139 325 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 6 ) REMARK 3 ORIGIN FOR THE GROUP (A): -49.4455 5.9313 1.2271 REMARK 3 T TENSOR REMARK 3 T11: 0.8892 T22: 0.8010 REMARK 3 T33: 1.0901 T12: 0.1138 REMARK 3 T13: 0.2469 T23: 0.1773 REMARK 3 L TENSOR REMARK 3 L11: 3.2545 L22: 2.4390 REMARK 3 L33: 2.7544 L12: 2.0305 REMARK 3 L13: -2.5979 L23: -0.7409 REMARK 3 S TENSOR REMARK 3 S11: 0.3542 S12: -0.3969 S13: 1.4420 REMARK 3 S21: -0.3025 S22: 0.1880 S23: -0.0332 REMARK 3 S31: -1.3321 S32: -0.6613 S33: -0.5604 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 7 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -46.3273 2.3006 6.2779 REMARK 3 T TENSOR REMARK 3 T11: 0.8609 T22: 0.7594 REMARK 3 T33: 0.8265 T12: 0.1340 REMARK 3 T13: 0.0865 T23: 0.0122 REMARK 3 L TENSOR REMARK 3 L11: 3.7474 L22: 4.0342 REMARK 3 L33: 5.0287 L12: 3.6746 REMARK 3 L13: -4.3201 L23: -4.3909 REMARK 3 S TENSOR REMARK 3 S11: 0.3665 S12: 0.6642 S13: 0.9081 REMARK 3 S21: 1.3303 S22: 1.9009 S23: 0.6633 REMARK 3 S31: -1.3098 S32: -0.5563 S33: -2.1576 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 18 THROUGH 78 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.0866 19.0480 -22.1892 REMARK 3 T TENSOR REMARK 3 T11: 0.7096 T22: 0.7169 REMARK 3 T33: 0.5893 T12: 0.0093 REMARK 3 T13: -0.0445 T23: 0.0509 REMARK 3 L TENSOR REMARK 3 L11: 7.3147 L22: 9.1388 REMARK 3 L33: 6.8335 L12: 6.3853 REMARK 3 L13: -4.5257 L23: -6.5060 REMARK 3 S TENSOR REMARK 3 S11: -0.2609 S12: -0.0084 S13: 0.2201 REMARK 3 S21: -0.1321 S22: 0.4642 S23: 0.5380 REMARK 3 S31: 0.0910 S32: -0.4051 S33: -0.2212 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 79 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.1865 22.2816 -27.8350 REMARK 3 T TENSOR REMARK 3 T11: 0.6640 T22: 0.8697 REMARK 3 T33: 0.9731 T12: 0.1038 REMARK 3 T13: -0.0519 T23: 0.1886 REMARK 3 L TENSOR REMARK 3 L11: 5.1919 L22: 5.4102 REMARK 3 L33: 5.6281 L12: 5.2953 REMARK 3 L13: -0.7881 L23: -0.9871 REMARK 3 S TENSOR REMARK 3 S11: -0.5244 S12: 0.6042 S13: 1.4447 REMARK 3 S21: -0.7749 S22: 1.1291 S23: 2.6008 REMARK 3 S31: -0.5088 S32: -1.1185 S33: -0.5035 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 92 THROUGH 105 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.5976 7.4169 -26.3837 REMARK 3 T TENSOR REMARK 3 T11: 1.0130 T22: 1.0001 REMARK 3 T33: 0.7475 T12: -0.3003 REMARK 3 T13: -0.1042 T23: -0.0110 REMARK 3 L TENSOR REMARK 3 L11: 5.3213 L22: 2.6748 REMARK 3 L33: 7.1479 L12: 2.2164 REMARK 3 L13: -2.9542 L23: -4.3146 REMARK 3 S TENSOR REMARK 3 S11: -0.8089 S12: 1.2233 S13: -0.8315 REMARK 3 S21: -1.9228 S22: 1.2279 S23: 0.7938 REMARK 3 S31: 1.4541 S32: -0.9215 S33: -0.2818 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 106 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.8076 14.0352 -35.7091 REMARK 3 T TENSOR REMARK 3 T11: 1.3350 T22: 1.6235 REMARK 3 T33: 1.0379 T12: -0.5831 REMARK 3 T13: -0.0948 T23: 0.1276 REMARK 3 L TENSOR REMARK 3 L11: 9.1806 L22: 0.9238 REMARK 3 L33: 2.0006 L12: -2.7369 REMARK 3 L13: 2.6785 L23: -0.4372 REMARK 3 S TENSOR REMARK 3 S11: -0.1625 S12: 2.6446 S13: -0.7731 REMARK 3 S21: -1.1559 S22: 1.0979 S23: -0.3159 REMARK 3 S31: 2.1238 S32: -1.3058 S33: -0.7815 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7TI9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1000262351. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JAN-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9250 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.730 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.73 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.57600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.360 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 7KAG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 82.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 6.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M AMMONIUM SULFATE, 2% HEXANEDIOL, REMARK 280 0.1M HEPES PH 7.5, 1.25% 1-BUTYL-3-METHYLIMIDAZOLIUM DICYANAMIDE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: F 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y+1/2,Z+1/2 REMARK 290 7555 -X,Y+1/2,-Z+1/2 REMARK 290 8555 X,-Y+1/2,-Z+1/2 REMARK 290 9555 X+1/2,Y,Z+1/2 REMARK 290 10555 -X+1/2,-Y,Z+1/2 REMARK 290 11555 -X+1/2,Y,-Z+1/2 REMARK 290 12555 X+1/2,-Y,-Z+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z REMARK 290 14555 -X+1/2,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y+1/2,-Z REMARK 290 16555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 55.87900 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 72.99450 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 55.87900 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 72.99450 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 55.87900 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 72.99450 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 55.87900 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 72.99450 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 42.13500 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 72.99450 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 42.13500 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 72.99450 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 42.13500 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 72.99450 REMARK 290 SMTRY1 12 1.000000 0.000000 0.000000 42.13500 REMARK 290 SMTRY2 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 72.99450 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 42.13500 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 55.87900 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 42.13500 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 55.87900 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 42.13500 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 55.87900 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 42.13500 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 55.87900 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -84.27000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 203 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 302 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 306 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 330 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 333 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 7 -159.19 -113.03 REMARK 500 CYS A 39 52.53 -154.69 REMARK 500 ASP A 110 -130.31 57.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP52003 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 7KAG RELATED DB: PDB DBREF 7TI9 A 0 111 UNP P0DTD1 R1AB_SARS2 818 929 SEQRES 1 A 112 GLY ALA PRO THR LYS VAL THR PHE GLY ASP ASP THR VAL SEQRES 2 A 112 ILE GLU VAL GLN GLY TYR LYS SER VAL ASN ILE THR PHE SEQRES 3 A 112 GLU LEU ASP GLU ARG ILE ASP LYS VAL LEU ASN GLU LYS SEQRES 4 A 112 CYS SER ALA TYR THR VAL GLU LEU GLY THR GLU VAL ASN SEQRES 5 A 112 GLU PHE ALA CYS VAL VAL ALA ASP ALA VAL ILE LYS THR SEQRES 6 A 112 LEU GLN PRO VAL SER GLU LEU LEU THR PRO LEU GLY ILE SEQRES 7 A 112 ASP LEU ASP GLU TRP SER MET ALA THR TYR TYR LEU PHE SEQRES 8 A 112 ASP GLU SER GLY GLU PHE LYS LEU ALA SER HIS MET TYR SEQRES 9 A 112 CYS SER PHE TYR PRO PRO ASP GLU HET GOL A 201 6 HET GOL A 202 6 HET CL A 203 1 HET CL A 204 1 HET CL A 205 1 HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 2(C3 H8 O3) FORMUL 4 CL 3(CL 1-) FORMUL 7 HOH *36(H2 O) HELIX 1 AA1 ILE A 31 CYS A 39 1 9 HELIX 2 AA2 GLU A 49 GLN A 66 1 18 HELIX 3 AA3 VAL A 68 THR A 73 1 6 HELIX 4 AA4 ASP A 78 MET A 84 1 7 SHEET 1 AA1 2 THR A 3 THR A 6 0 SHEET 2 AA1 2 VAL A 12 VAL A 15 -1 O VAL A 15 N THR A 3 SHEET 1 AA2 4 ALA A 41 GLU A 45 0 SHEET 2 AA2 4 TYR A 18 PHE A 25 -1 N VAL A 21 O TYR A 42 SHEET 3 AA2 4 HIS A 101 SER A 105 1 O MET A 102 N THR A 24 SHEET 4 AA2 4 TYR A 88 ASP A 91 -1 N TYR A 88 O SER A 105 CRYST1 84.270 111.758 145.989 90.00 90.00 90.00 F 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011867 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008948 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006850 0.00000