HEADER TRANSFERASE 18-JAN-22 7TLQ TITLE STRUCTURE OF ATOPOBIUM PARVULUM SUFS C375S COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYSTEINE DESULFURASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.8.1.7; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LANCEFIELDELLA PARVULA; SOURCE 3 ORGANISM_TAXID: 1382; SOURCE 4 GENE: APAR_0399; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS CYSTEINE DESULFERASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.KARUNAKARAN,J.F.COUTURE REVDAT 3 18-OCT-23 7TLQ 1 REMARK REVDAT 2 27-APR-22 7TLQ 1 JRNL REVDAT 1 16-FEB-22 7TLQ 0 JRNL AUTH G.KARUNAKARAN,Y.YANG,V.TREMBLAY,Z.NING,J.MARTIN,A.BELAOUAD, JRNL AUTH 2 D.FIGEYS,J.S.BRUNZELLE,P.M.GIGUERE,A.STINTZI,J.F.COUTURE JRNL TITL STRUCTURAL ANALYSIS OF ATOPOBIUM PARVULUM SUFS CYSTEINE JRNL TITL 2 DESULFURASE LINKED TO CROHN'S DISEASE. JRNL REF FEBS LETT. V. 596 898 2022 JRNL REFN ISSN 0014-5793 JRNL PMID 35122247 JRNL DOI 10.1002/1873-3468.14295 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 72.6 REMARK 3 NUMBER OF REFLECTIONS : 47798 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.200 REMARK 3 FREE R VALUE TEST SET COUNT : 2893 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.8000 - 6.0500 0.82 3562 160 0.1810 0.2221 REMARK 3 2 6.0500 - 4.8100 0.86 3743 158 0.1840 0.2143 REMARK 3 3 4.8100 - 4.2000 0.88 3785 174 0.1625 0.1945 REMARK 3 4 4.2000 - 3.8200 0.87 3761 170 0.1826 0.2256 REMARK 3 5 3.8200 - 3.5500 0.88 3816 165 0.1889 0.2699 REMARK 3 6 3.5500 - 3.3400 0.87 3808 159 0.2128 0.2272 REMARK 3 7 3.3400 - 3.1700 0.88 3817 169 0.2109 0.2845 REMARK 3 8 3.1700 - 3.0300 0.88 3817 172 0.2060 0.2654 REMARK 3 9 3.0300 - 2.9200 0.86 3736 152 0.2049 0.2599 REMARK 3 10 2.9200 - 2.8200 0.83 3562 163 0.2085 0.2709 REMARK 3 11 2.8200 - 2.7300 0.78 3361 147 0.1993 0.2679 REMARK 3 12 2.7300 - 2.6500 0.73 3147 142 0.2083 0.2493 REMARK 3 13 2.6500 - 2.5800 0.69 2964 134 0.2082 0.1949 REMARK 3 14 2.5800 - 2.5200 0.66 2868 123 0.1941 0.2396 REMARK 3 15 2.5200 - 2.4600 0.61 2622 109 0.1996 0.2570 REMARK 3 16 2.4600 - 2.4100 0.58 2509 111 0.2089 0.2455 REMARK 3 17 2.4100 - 2.3600 0.56 2417 107 0.2093 0.2563 REMARK 3 18 2.3600 - 2.3100 0.54 2342 103 0.2123 0.2630 REMARK 3 19 2.3100 - 2.2700 0.51 2223 97 0.2228 0.3107 REMARK 3 20 2.2700 - 2.2300 0.49 2131 92 0.2321 0.2904 REMARK 3 21 2.2300 - 2.2000 0.45 1954 86 0.2328 0.2875 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.264 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.494 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.31 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 6332 REMARK 3 ANGLE : 0.557 8665 REMARK 3 CHIRALITY : 0.043 1020 REMARK 3 PLANARITY : 0.004 1126 REMARK 3 DIHEDRAL : 5.667 902 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 17.5255 23.5942 28.1018 REMARK 3 T TENSOR REMARK 3 T11: 0.1612 T22: 0.1295 REMARK 3 T33: 0.1669 T12: -0.0001 REMARK 3 T13: 0.0227 T23: 0.0015 REMARK 3 L TENSOR REMARK 3 L11: 0.7276 L22: 0.2061 REMARK 3 L33: 0.8297 L12: 0.0780 REMARK 3 L13: 0.3295 L23: 0.0028 REMARK 3 S TENSOR REMARK 3 S11: -0.0642 S12: 0.0251 S13: 0.0073 REMARK 3 S21: -0.0029 S22: -0.0182 S23: -0.0027 REMARK 3 S31: 0.0070 S32: 0.0413 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7TLQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JAN-22. REMARK 100 THE DEPOSITION ID IS D_1000262257. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAY-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47832 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 29.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 5J8Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG3350, 50 MM SODIUM MALATE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.30600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.17150 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.30600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 61.17150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -17 REMARK 465 ALA A -16 REMARK 465 SER A -15 REMARK 465 SER A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 GLY A 0 REMARK 465 ALA A 57 REMARK 465 LEU A 58 REMARK 465 ARG A 59 REMARK 465 GLY A 60 REMARK 465 SER A 418 REMARK 465 ALA A 419 REMARK 465 VAL A 420 REMARK 465 ASN A 421 REMARK 465 THR A 422 REMARK 465 LYS A 423 REMARK 465 GLN A 424 REMARK 465 ASN A 425 REMARK 465 LYS A 426 REMARK 465 GLU A 427 REMARK 465 LEU A 428 REMARK 465 LYS A 429 REMARK 465 MET B -17 REMARK 465 ALA B -16 REMARK 465 SER B -15 REMARK 465 SER B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 GLY B 0 REMARK 465 ASN B 56 REMARK 465 ALA B 57 REMARK 465 LEU B 58 REMARK 465 ARG B 59 REMARK 465 GLY B 60 REMARK 465 SER B 418 REMARK 465 ALA B 419 REMARK 465 VAL B 420 REMARK 465 ASN B 421 REMARK 465 THR B 422 REMARK 465 LYS B 423 REMARK 465 GLN B 424 REMARK 465 ASN B 425 REMARK 465 LYS B 426 REMARK 465 GLU B 427 REMARK 465 LEU B 428 REMARK 465 LYS B 429 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 3 CG OD1 OD2 REMARK 470 LYS A 26 CG CD CE NZ REMARK 470 LEU A 61 CG CD1 CD2 REMARK 470 ARG A 63 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 120 CD CE NZ REMARK 470 LYS A 144 CG CD CE NZ REMARK 470 GLU A 172 CG CD OE1 OE2 REMARK 470 ARG A 173 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 197 CG CD CE NZ REMARK 470 ASP A 223 CG OD1 OD2 REMARK 470 GLU A 250 CG CD OE1 OE2 REMARK 470 LYS A 300 CG CD CE NZ REMARK 470 LYS A 309 CG CD CE NZ REMARK 470 LYS A 312 CD CE NZ REMARK 470 LYS A 337 CG CD CE NZ REMARK 470 HIS A 356 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 407 CG CD OE1 OE2 REMARK 470 LYS A 414 CG CD CE NZ REMARK 470 ASP B 3 CG OD1 OD2 REMARK 470 LYS B 26 CG CD CE NZ REMARK 470 LEU B 61 CG CD1 CD2 REMARK 470 LYS B 91 CG CD CE NZ REMARK 470 LYS B 120 CG CD CE NZ REMARK 470 LYS B 144 CG CD CE NZ REMARK 470 GLU B 172 CG CD OE1 OE2 REMARK 470 ARG B 173 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 218 CG CD1 CD2 REMARK 470 ASP B 223 CG OD1 OD2 REMARK 470 ARG B 248 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 250 CG CD OE1 OE2 REMARK 470 GLU B 263 CG CD OE1 OE2 REMARK 470 LYS B 300 CG CD CE NZ REMARK 470 LYS B 309 CG CD CE NZ REMARK 470 LYS B 312 CD CE NZ REMARK 470 GLU B 315 CG CD OE1 OE2 REMARK 470 ARG B 319 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 323 CG CD OE1 NE2 REMARK 470 LEU B 325 CG CD1 CD2 REMARK 470 ASP B 329 CG OD1 OD2 REMARK 470 LYS B 337 CG CD CE NZ REMARK 470 LEU B 338 CG CD1 CD2 REMARK 470 ARG B 351 CG CD NE CZ NH1 NH2 REMARK 470 HIS B 354 CG ND1 CD2 CE1 NE2 REMARK 470 HIS B 356 CG ND1 CD2 CE1 NE2 REMARK 470 ASN B 365 CG OD1 ND2 REMARK 470 ARG B 370 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 399 CG CD CE NZ REMARK 470 GLU B 407 CG CD OE1 OE2 REMARK 470 GLN B 411 CG CD OE1 NE2 REMARK 470 LYS B 414 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 53 23.65 -143.47 REMARK 500 ILE A 136 -59.47 -124.36 REMARK 500 PHE A 258 -84.31 -96.35 REMARK 500 GLU A 263 -10.94 73.23 REMARK 500 ASP A 306 106.83 76.04 REMARK 500 MET B 53 44.96 -147.32 REMARK 500 ILE B 136 -61.78 -127.99 REMARK 500 PHE B 258 -82.05 -97.79 REMARK 500 GLU B 263 -19.94 74.38 REMARK 500 ASP B 306 109.33 76.16 REMARK 500 ALA B 376 51.91 -142.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 867 DISTANCE = 5.94 ANGSTROMS REMARK 525 HOH A 868 DISTANCE = 6.51 ANGSTROMS REMARK 525 HOH A 869 DISTANCE = 6.60 ANGSTROMS DBREF 7TLQ A 1 429 UNP C8W9P2 C8W9P2_ATOPD 1 429 DBREF 7TLQ B 1 429 UNP C8W9P2 C8W9P2_ATOPD 1 429 SEQADV 7TLQ MET A -17 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ ALA A -16 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ SER A -15 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ SER A -14 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ HIS A -13 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ HIS A -12 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ HIS A -11 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ HIS A -10 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ HIS A -9 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ HIS A -8 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ HIS A -7 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ GLU A -6 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ ASN A -5 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ LEU A -4 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ TYR A -3 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ PHE A -2 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ GLN A -1 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ GLY A 0 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ SER A 375 UNP C8W9P2 CYS 375 ENGINEERED MUTATION SEQADV 7TLQ MET B -17 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ ALA B -16 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ SER B -15 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ SER B -14 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ HIS B -13 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ HIS B -12 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ HIS B -11 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ HIS B -10 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ HIS B -9 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ HIS B -8 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ HIS B -7 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ GLU B -6 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ ASN B -5 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ LEU B -4 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ TYR B -3 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ PHE B -2 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ GLN B -1 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ GLY B 0 UNP C8W9P2 EXPRESSION TAG SEQADV 7TLQ SER B 375 UNP C8W9P2 CYS 375 ENGINEERED MUTATION SEQRES 1 A 447 MET ALA SER SER HIS HIS HIS HIS HIS HIS HIS GLU ASN SEQRES 2 A 447 LEU TYR PHE GLN GLY MET THR ASP THR GLU VAL ALA GLN SEQRES 3 A 447 ILE THR ASP ASN PRO TYR LYS ALA ASP PHE PRO ILE LEU SEQRES 4 A 447 ALA ALA ASN PRO LYS VAL ALA TYR LEU ASP SER ALA ALA SEQRES 5 A 447 THR SER GLN ARG PRO ARG VAL VAL ILE GLU ALA GLN SER SEQRES 6 A 447 ARG PHE TYR GLU THR MET ASN ALA ASN ALA LEU ARG GLY SEQRES 7 A 447 LEU TYR ARG TRP SER VAL ASP ALA THR ALA ALA ILE GLU SEQRES 8 A 447 ASP ALA ARG ALA SER ILE ALA LYS PHE ILE GLY ALA VAL SEQRES 9 A 447 ASP LYS ASN ASP LYS PRO GLU SER GLN GLN ILE ILE PHE SEQRES 10 A 447 THR ARG ASN THR SER GLU ALA LEU ASN LEU VAL ALA SER SEQRES 11 A 447 SER LEU GLY ARG TYR ALA LEU LYS PRO GLY ASP ASP VAL SEQRES 12 A 447 VAL ILE SER ILE MET GLU HIS HIS SER ASN ILE ILE PRO SEQRES 13 A 447 TRP GLN GLN ILE CYS LYS ALA THR GLY ALA ASN LEU VAL SEQRES 14 A 447 TYR LEU ARG MET ASN SER GLN TYR GLN ILE THR PRO GLU SEQRES 15 A 447 GLU ILE ALA SER LYS ILE THR GLU ARG ALA LYS ILE VAL SEQRES 16 A 447 SER VAL THR HIS VAL SER ASN VAL LEU GLY THR ARG ASN SEQRES 17 A 447 ASP ILE LYS ALA ILE ALA LYS ARG THR HIS ALA MET GLY SEQRES 18 A 447 ALA TYR MET VAL VAL ASP ALA ALA GLN SER ALA PRO HIS SEQRES 19 A 447 ILE LEU VAL ASN VAL HIS ASP LEU ASP CYS ASP LEU LEU SEQRES 20 A 447 ALA PHE SER ALA HIS LYS MET CYS GLY PRO MET GLY ILE SEQRES 21 A 447 GLY VAL LEU TRP GLY ARG ALA GLU LEU LEU ASN ALA MET SEQRES 22 A 447 PRO PRO PHE LEU THR GLY GLY GLU MET ILE ASP SER VAL SEQRES 23 A 447 THR GLU THR GLY ALA VAL TRP ALA PRO VAL PRO GLU LYS SEQRES 24 A 447 PHE GLU ALA GLY THR GLN ASP ALA ALA GLY ILE TYR ALA SEQRES 25 A 447 THR GLY ALA ALA ILE LYS TYR LEU ASN GLY LEU ASP MET SEQRES 26 A 447 ALA LYS ILE GLU LYS ARG GLU GLU LEU LEU ALA ARG TYR SEQRES 27 A 447 LEU VAL GLN GLN LEU CYS THR LEU ASP PHE VAL ASP ILE SEQRES 28 A 447 VAL GLY SER LYS LEU GLY GLN ASN HIS VAL GLY ALA VAL SEQRES 29 A 447 ALA PHE ASN VAL ARG GLY VAL HIS PRO HIS ASP VAL SER SEQRES 30 A 447 SER ILE LEU ASP MET ASN ASN VAL CYS ILE ARG ALA GLY SEQRES 31 A 447 HIS HIS SER ALA GLU PRO LEU LEU ILE GLU LEU HIS GLU SEQRES 32 A 447 SER SER THR CYS ARG ALA SER VAL ALA PHE TYR ASN ASP SEQRES 33 A 447 LYS HIS ASP ILE ASP GLN LEU ILE GLU GLY LEU ASN GLN SEQRES 34 A 447 VAL TRP LYS ILE PHE GLY SER ALA VAL ASN THR LYS GLN SEQRES 35 A 447 ASN LYS GLU LEU LYS SEQRES 1 B 447 MET ALA SER SER HIS HIS HIS HIS HIS HIS HIS GLU ASN SEQRES 2 B 447 LEU TYR PHE GLN GLY MET THR ASP THR GLU VAL ALA GLN SEQRES 3 B 447 ILE THR ASP ASN PRO TYR LYS ALA ASP PHE PRO ILE LEU SEQRES 4 B 447 ALA ALA ASN PRO LYS VAL ALA TYR LEU ASP SER ALA ALA SEQRES 5 B 447 THR SER GLN ARG PRO ARG VAL VAL ILE GLU ALA GLN SER SEQRES 6 B 447 ARG PHE TYR GLU THR MET ASN ALA ASN ALA LEU ARG GLY SEQRES 7 B 447 LEU TYR ARG TRP SER VAL ASP ALA THR ALA ALA ILE GLU SEQRES 8 B 447 ASP ALA ARG ALA SER ILE ALA LYS PHE ILE GLY ALA VAL SEQRES 9 B 447 ASP LYS ASN ASP LYS PRO GLU SER GLN GLN ILE ILE PHE SEQRES 10 B 447 THR ARG ASN THR SER GLU ALA LEU ASN LEU VAL ALA SER SEQRES 11 B 447 SER LEU GLY ARG TYR ALA LEU LYS PRO GLY ASP ASP VAL SEQRES 12 B 447 VAL ILE SER ILE MET GLU HIS HIS SER ASN ILE ILE PRO SEQRES 13 B 447 TRP GLN GLN ILE CYS LYS ALA THR GLY ALA ASN LEU VAL SEQRES 14 B 447 TYR LEU ARG MET ASN SER GLN TYR GLN ILE THR PRO GLU SEQRES 15 B 447 GLU ILE ALA SER LYS ILE THR GLU ARG ALA LYS ILE VAL SEQRES 16 B 447 SER VAL THR HIS VAL SER ASN VAL LEU GLY THR ARG ASN SEQRES 17 B 447 ASP ILE LYS ALA ILE ALA LYS ARG THR HIS ALA MET GLY SEQRES 18 B 447 ALA TYR MET VAL VAL ASP ALA ALA GLN SER ALA PRO HIS SEQRES 19 B 447 ILE LEU VAL ASN VAL HIS ASP LEU ASP CYS ASP LEU LEU SEQRES 20 B 447 ALA PHE SER ALA HIS LYS MET CYS GLY PRO MET GLY ILE SEQRES 21 B 447 GLY VAL LEU TRP GLY ARG ALA GLU LEU LEU ASN ALA MET SEQRES 22 B 447 PRO PRO PHE LEU THR GLY GLY GLU MET ILE ASP SER VAL SEQRES 23 B 447 THR GLU THR GLY ALA VAL TRP ALA PRO VAL PRO GLU LYS SEQRES 24 B 447 PHE GLU ALA GLY THR GLN ASP ALA ALA GLY ILE TYR ALA SEQRES 25 B 447 THR GLY ALA ALA ILE LYS TYR LEU ASN GLY LEU ASP MET SEQRES 26 B 447 ALA LYS ILE GLU LYS ARG GLU GLU LEU LEU ALA ARG TYR SEQRES 27 B 447 LEU VAL GLN GLN LEU CYS THR LEU ASP PHE VAL ASP ILE SEQRES 28 B 447 VAL GLY SER LYS LEU GLY GLN ASN HIS VAL GLY ALA VAL SEQRES 29 B 447 ALA PHE ASN VAL ARG GLY VAL HIS PRO HIS ASP VAL SER SEQRES 30 B 447 SER ILE LEU ASP MET ASN ASN VAL CYS ILE ARG ALA GLY SEQRES 31 B 447 HIS HIS SER ALA GLU PRO LEU LEU ILE GLU LEU HIS GLU SEQRES 32 B 447 SER SER THR CYS ARG ALA SER VAL ALA PHE TYR ASN ASP SEQRES 33 B 447 LYS HIS ASP ILE ASP GLN LEU ILE GLU GLY LEU ASN GLN SEQRES 34 B 447 VAL TRP LYS ILE PHE GLY SER ALA VAL ASN THR LYS GLN SEQRES 35 B 447 ASN LYS GLU LEU LYS HET PLP A 600 15 HET PLP B 600 15 HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 3 PLP 2(C8 H10 N O6 P) FORMUL 5 HOH *349(H2 O) HELIX 1 AA1 THR A 2 ASP A 11 1 10 HELIX 2 AA2 TYR A 14 ASP A 17 5 4 HELIX 3 AA3 PHE A 18 ASN A 24 1 7 HELIX 4 AA4 PRO A 39 MET A 53 1 15 HELIX 5 AA5 TYR A 62 ILE A 83 1 22 HELIX 6 AA6 GLU A 93 GLN A 95 5 3 HELIX 7 AA7 ASN A 102 LEU A 119 1 18 HELIX 8 AA8 HIS A 132 ASN A 135 5 4 HELIX 9 AA9 ILE A 136 GLY A 147 1 12 HELIX 10 AB1 THR A 162 ILE A 170 1 9 HELIX 11 AB2 ASP A 191 MET A 202 1 12 HELIX 12 AB3 ASN A 220 ASP A 225 1 6 HELIX 13 AB4 HIS A 234 MET A 236 5 3 HELIX 14 AB5 ARG A 248 MET A 255 1 8 HELIX 15 AB6 PRO A 279 GLU A 283 5 5 HELIX 16 AB7 ASP A 288 ASP A 306 1 19 HELIX 17 AB8 ASP A 306 CYS A 326 1 21 HELIX 18 AB9 LEU A 338 HIS A 342 5 5 HELIX 19 AC1 HIS A 354 ASN A 365 1 12 HELIX 20 AC2 ALA A 376 LEU A 383 1 8 HELIX 21 AC3 ASP A 398 GLY A 417 1 20 HELIX 22 AC4 THR B 2 ASP B 11 1 10 HELIX 23 AC5 TYR B 14 ASP B 17 5 4 HELIX 24 AC6 PHE B 18 ALA B 23 1 6 HELIX 25 AC7 PRO B 39 MET B 53 1 15 HELIX 26 AC8 TYR B 62 ILE B 83 1 22 HELIX 27 AC9 GLU B 93 GLN B 95 5 3 HELIX 28 AD1 ASN B 102 LEU B 119 1 18 HELIX 29 AD2 HIS B 132 ASN B 135 5 4 HELIX 30 AD3 ILE B 136 GLY B 147 1 12 HELIX 31 AD4 THR B 162 ILE B 170 1 9 HELIX 32 AD5 ASP B 191 MET B 202 1 12 HELIX 33 AD6 ASN B 220 ASP B 225 1 6 HELIX 34 AD7 HIS B 234 MET B 236 5 3 HELIX 35 AD8 ARG B 248 MET B 255 1 8 HELIX 36 AD9 PRO B 279 GLU B 283 5 5 HELIX 37 AE1 ASP B 288 ASP B 306 1 19 HELIX 38 AE2 ASP B 306 CYS B 326 1 21 HELIX 39 AE3 LEU B 338 HIS B 342 5 5 HELIX 40 AE4 HIS B 354 ASN B 365 1 12 HELIX 41 AE5 ALA B 376 LEU B 383 1 8 HELIX 42 AE6 ASP B 398 GLY B 417 1 20 SHEET 1 AA1 2 ALA A 28 TYR A 29 0 SHEET 2 AA1 2 VAL A 367 CYS A 368 1 O CYS A 368 N ALA A 28 SHEET 1 AA2 7 ILE A 97 THR A 100 0 SHEET 2 AA2 7 GLY A 243 GLY A 247 -1 O GLY A 243 N THR A 100 SHEET 3 AA2 7 LEU A 228 SER A 232 -1 N LEU A 229 O TRP A 246 SHEET 4 AA2 7 TYR A 205 ASP A 209 1 N VAL A 208 O ALA A 230 SHEET 5 AA2 7 ALA A 174 THR A 180 1 N VAL A 177 O VAL A 207 SHEET 6 AA2 7 ASP A 124 SER A 128 1 N ASP A 124 O LYS A 175 SHEET 7 AA2 7 ASN A 149 LEU A 153 1 O VAL A 151 N VAL A 125 SHEET 1 AA3 2 ILE A 265 VAL A 268 0 SHEET 2 AA3 2 ALA A 273 TRP A 275 -1 O VAL A 274 N ASP A 266 SHEET 1 AA4 4 VAL A 331 VAL A 334 0 SHEET 2 AA4 4 ALA A 345 VAL A 350 -1 O ALA A 347 N VAL A 334 SHEET 3 AA4 4 THR A 388 SER A 392 -1 O CYS A 389 N PHE A 348 SHEET 4 AA4 4 ARG A 370 GLY A 372 -1 N ARG A 370 O ARG A 390 SHEET 1 AA5 2 ALA B 28 TYR B 29 0 SHEET 2 AA5 2 VAL B 367 CYS B 368 1 O CYS B 368 N ALA B 28 SHEET 1 AA6 7 ILE B 97 THR B 100 0 SHEET 2 AA6 7 GLY B 243 GLY B 247 -1 O GLY B 243 N THR B 100 SHEET 3 AA6 7 LEU B 228 SER B 232 -1 N LEU B 229 O TRP B 246 SHEET 4 AA6 7 TYR B 205 ASP B 209 1 N VAL B 208 O LEU B 228 SHEET 5 AA6 7 ALA B 174 THR B 180 1 N VAL B 177 O VAL B 207 SHEET 6 AA6 7 ASP B 124 SER B 128 1 N ASP B 124 O LYS B 175 SHEET 7 AA6 7 ASN B 149 LEU B 153 1 O ASN B 149 N VAL B 125 SHEET 1 AA7 2 ILE B 265 VAL B 268 0 SHEET 2 AA7 2 ALA B 273 TRP B 275 -1 O VAL B 274 N ASP B 266 SHEET 1 AA8 4 VAL B 331 VAL B 334 0 SHEET 2 AA8 4 ALA B 345 VAL B 350 -1 O ALA B 347 N VAL B 334 SHEET 3 AA8 4 THR B 388 SER B 392 -1 O CYS B 389 N PHE B 348 SHEET 4 AA8 4 ARG B 370 GLY B 372 -1 N ARG B 370 O ARG B 390 LINK NZ LYS A 235 C4A PLP A 600 1555 1555 1.43 LINK NZ LYS B 235 C4A PLP B 600 1555 1555 1.43 CISPEP 1 VAL A 278 PRO A 279 0 3.96 CISPEP 2 VAL B 278 PRO B 279 0 2.76 CRYST1 71.120 110.612 122.343 90.00 90.00 90.00 P 2 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014061 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009041 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008174 0.00000