data_7TM1 # _entry.id 7TM1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7TM1 pdb_00007tm1 10.2210/pdb7tm1/pdb WWPDB D_1000262534 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-04-20 2 'Structure model' 1 1 2022-04-27 3 'Structure model' 1 2 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7TM1 _pdbx_database_status.recvd_initial_deposition_date 2022-01-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email andyn@uic.edu _pdbx_contact_author.name_first Andy _pdbx_contact_author.name_last Nguyen _pdbx_contact_author.name_mi I. _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-4137-6453 # _audit_author.name 'Nguyen, A.I.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0003-4137-6453 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 144 _citation.language ? _citation.page_first 7001 _citation.page_last 7009 _citation.title 'Assembly of pi-Stacking Helical Peptides into a Porous and Multivariable Proteomimetic Framework.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.2c02146 _citation.pdbx_database_id_PubMed 35390261 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Heinz-Kunert, S.L.' 1 ? primary 'Pandya, A.' 2 0000-0003-3303-1009 primary 'Dang, V.T.' 3 ? primary 'Tran, P.N.' 4 ? primary 'Ghosh, S.' 5 ? primary 'McElheny, D.' 6 ? primary 'Santarsiero, B.D.' 7 0000-0002-9032-9699 primary 'Ren, Z.' 8 0000-0001-7098-3127 primary 'Nguyen, A.I.' 9 0000-0003-4137-6453 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'helical peptide' 957.232 3 ? ? ? ? 2 non-polymer syn "5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide" 257.248 3 ? ? ? ? 3 non-polymer syn ;ethyl 5'-formyl[2,2'-bipyridine]-5-carboxylate ; 256.257 3 ? ? ? ? 4 non-polymer syn ACETONITRILE 41.052 1 ? ? ? ? 5 water nat water 18.015 5 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'L(AIB)M(AIB)L(AIB)Q(AIB)L' _entity_poly.pdbx_seq_one_letter_code_can LAMALAQAL _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide" I77 3 ;ethyl 5'-formyl[2,2'-bipyridine]-5-carboxylate ; I6W 4 ACETONITRILE CCN 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 AIB n 1 3 MET n 1 4 AIB n 1 5 LEU n 1 6 AIB n 1 7 GLN n 1 8 AIB n 1 9 LEU n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 9 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight AIB 'L-peptide linking' n 'ALPHA-AMINOISOBUTYRIC ACID' ? 'C4 H9 N O2' 103.120 CCN non-polymer . ACETONITRILE ? 'C2 H3 N' 41.052 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 HOH non-polymer . WATER ? 'H2 O' 18.015 I6W non-polymer . ;ethyl 5'-formyl[2,2'-bipyridine]-5-carboxylate ; ? 'C14 H12 N2 O3' 256.257 I77 non-polymer . "5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide" ? 'C12 H11 N5 O2' 257.248 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 2 2 LEU LEU A . n A 1 2 AIB 2 3 3 AIB AIB A . n A 1 3 MET 3 4 4 MET MET A . n A 1 4 AIB 4 5 5 AIB AIB A . n A 1 5 LEU 5 6 6 LEU LEU A . n A 1 6 AIB 6 7 7 AIB AIB A . n A 1 7 GLN 7 8 8 GLN GLN A . n A 1 8 AIB 8 9 9 AIB AIB A . n A 1 9 LEU 9 10 10 LEU LEU A . n B 1 1 LEU 1 2 2 LEU LEU B . n B 1 2 AIB 2 3 3 AIB AIB B . n B 1 3 MET 3 4 4 MET MET B . n B 1 4 AIB 4 5 5 AIB AIB B . n B 1 5 LEU 5 6 6 LEU LEU B . n B 1 6 AIB 6 7 7 AIB AIB B . n B 1 7 GLN 7 8 8 GLN GLN B . n B 1 8 AIB 8 9 9 AIB AIB B . n B 1 9 LEU 9 10 10 LEU LEU B . n C 1 1 LEU 1 2 2 LEU LEU C . n C 1 2 AIB 2 3 3 AIB AIB C . n C 1 3 MET 3 4 4 MET MET C . n C 1 4 AIB 4 5 5 AIB AIB C . n C 1 5 LEU 5 6 6 LEU LEU C . n C 1 6 AIB 6 7 7 AIB AIB C . n C 1 7 GLN 7 8 8 GLN GLN C . n C 1 8 AIB 8 9 9 AIB AIB C . n C 1 9 LEU 9 10 10 LEU LEU C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 I77 1 101 11 I77 BPH A . E 3 I6W 1 102 1 I6W BPE A . F 2 I77 1 101 11 I77 BPH B . G 3 I6W 1 102 1 I6W BPE B . H 4 CCN 1 101 1 CCN ACN C . I 2 I77 1 102 11 I77 BPH C . J 3 I6W 1 103 1 I6W BPE C . K 5 HOH 1 201 3 HOH HOH B . L 5 HOH 1 201 2 HOH HOH C . L 5 HOH 2 202 1 HOH HOH C . L 5 HOH 3 203 4 HOH HOH C . L 5 HOH 4 204 5 HOH HOH C . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19.2_4158 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 107.416 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7TM1 _cell.details ? _cell.formula_units_Z ? _cell.length_a 78.749 _cell.length_a_esd ? _cell.length_b 11.566 _cell.length_b_esd ? _cell.length_c 27.904 _cell.length_c_esd ? _cell.volume 24250.151 _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TM1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7TM1 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.73 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'SLOW COOLING' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'water and acetonitrile' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-06-28 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.976 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-D' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.976 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-D _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 6.94 _reflns.entry_id 7TM1 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.1 _reflns.d_resolution_low 26.62 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 17817 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 95.64 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.9 _reflns.pdbx_Rmerge_I_obs .228 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.55 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half .97 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.1 _reflns_shell.d_res_low 1.139 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 849 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs .78 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half .792 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 9.75 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7TM1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.10 _refine.ls_d_res_low 26.62 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 17817 _refine.ls_number_reflns_R_free 1749 _refine.ls_number_reflns_R_work 16068 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 93.25 _refine.ls_percent_reflns_R_free 9.82 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1467 _refine.ls_R_factor_R_free 0.1628 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1448 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'energy minimized helix' _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 21.1770 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.0898 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.10 _refine_hist.d_res_low 26.62 _refine_hist.number_atoms_solvent 5 _refine_hist.number_atoms_total 317 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 252 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 60 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0124 ? 383 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 2.2411 ? 530 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0451 ? 25 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0132 ? 62 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 43.1742 ? 68 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.10 1.13 . . 111 1150 77.98 . . . 0.2354 . 0.2196 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.13 1.17 . . 144 1371 92.21 . . . 0.2536 . 0.1957 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.17 1.21 . . 140 1365 97.66 . . . 0.2135 . 0.2049 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.21 1.26 . . 160 1375 96.12 . . . 0.2553 . 0.1941 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.26 1.32 . . 150 1373 95.67 . . . 0.2279 . 0.1951 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.32 1.39 . . 136 1353 93.94 . . . 0.1865 . 0.1839 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.39 1.47 . . 153 1299 91.49 . . . 0.2097 . 0.1536 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.47 1.59 . . 151 1395 96.81 . . . 0.1589 . 0.1364 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.59 1.75 . . 155 1343 95.84 . . . 0.1581 . 0.1297 . . . . . . . . . . . 'X-RAY DIFFRACTION' 1.75 2.00 . . 162 1386 95.91 . . . 0.1529 . 0.1343 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.00 2.52 . . 145 1282 90.32 . . . 0.1481 . 0.1165 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.52 26.62 . . 142 1376 95.41 . . . 0.1012 . 0.1162 . . . . . . . . . . . # _struct.entry_id 7TM1 _struct.title 'Porous framework formed by assembly of a bipyridyl-conjugated helical peptide' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7TM1 _struct_keywords.text 'porous, framework, helix, 310, alpha, assembly, bipyridine, UIC-1, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 2 ? J N N 3 ? K N N 5 ? L N N 5 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7TM1 _struct_ref.pdbx_db_accession 7TM1 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7TM1 A 1 ? 9 ? 7TM1 2 ? 10 ? 2 10 2 1 7TM1 B 1 ? 9 ? 7TM1 2 ? 10 ? 2 10 3 1 7TM1 C 1 ? 9 ? 7TM1 2 ? 10 ? 2 10 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA monomeric 1 2 software_defined_assembly PISA monomeric 1 3 software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,D,E 2 1 B,F,G,K 3 1 C,H,I,J,L # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LEU A 1 ? LEU A 9 ? LEU A 2 LEU A 10 1 ? 9 HELX_P HELX_P2 AA2 AIB B 2 ? LEU B 9 ? AIB B 3 LEU B 10 1 ? 8 HELX_P HELX_P3 AA3 AIB C 2 ? LEU C 9 ? AIB C 3 LEU C 10 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LEU 1 C ? ? ? 1_555 A AIB 2 N ? ? A LEU 2 A AIB 3 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale2 covale one ? A LEU 1 N ? ? ? 1_555 E I6W . C02 ? ? A LEU 2 A I6W 102 1_555 ? ? ? ? ? ? ? 1.425 ? ? covale3 covale both ? A AIB 2 C ? ? ? 1_555 A MET 3 N ? ? A AIB 3 A MET 4 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale4 covale both ? A MET 3 C ? ? ? 1_555 A AIB 4 N ? ? A MET 4 A AIB 5 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale5 covale both ? A AIB 4 C ? ? ? 1_555 A LEU 5 N ? ? A AIB 5 A LEU 6 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale6 covale both ? A LEU 5 C ? ? ? 1_555 A AIB 6 N ? ? A LEU 6 A AIB 7 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale7 covale both ? A AIB 6 C ? ? ? 1_555 A GLN 7 N ? ? A AIB 7 A GLN 8 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale8 covale both ? A GLN 7 C ? ? ? 1_555 A AIB 8 N ? ? A GLN 8 A AIB 9 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale9 covale both ? A AIB 8 C ? ? ? 1_555 A LEU 9 N ? ? A AIB 9 A LEU 10 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale10 covale one ? A LEU 9 C ? ? ? 1_555 D I77 . N15 A ? A LEU 10 A I77 101 1_555 ? ? ? ? ? ? ? 1.425 ? ? covale11 covale one ? A LEU 9 C ? ? ? 1_555 D I77 . N15 B ? A LEU 10 A I77 101 1_555 ? ? ? ? ? ? ? 1.426 ? ? covale12 covale one ? A LEU 9 C ? ? ? 1_555 D I77 . N15 C ? A LEU 10 A I77 101 1_555 ? ? ? ? ? ? ? 1.427 ? ? covale13 covale none ? D I77 . N01 B ? ? 1_555 G I6W . N07 ? ? A I77 101 B I6W 102 2_565 ? ? ? ? ? ? ? 1.374 ? ? covale14 covale both ? B LEU 1 C ? ? ? 1_555 B AIB 2 N ? ? B LEU 2 B AIB 3 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale15 covale one ? B LEU 1 N ? ? ? 1_555 G I6W . C02 ? ? B LEU 2 B I6W 102 1_555 ? ? ? ? ? ? ? 1.424 ? ? covale16 covale both ? B AIB 2 C ? ? ? 1_555 B MET 3 N ? ? B AIB 3 B MET 4 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale17 covale both ? B MET 3 C ? ? ? 1_555 B AIB 4 N ? ? B MET 4 B AIB 5 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale18 covale both ? B AIB 4 C ? ? ? 1_555 B LEU 5 N ? ? B AIB 5 B LEU 6 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale19 covale both ? B LEU 5 C ? ? ? 1_555 B AIB 6 N ? ? B LEU 6 B AIB 7 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale20 covale both ? B AIB 6 C ? ? ? 1_555 B GLN 7 N ? ? B AIB 7 B GLN 8 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale21 covale both ? B GLN 7 C ? ? ? 1_555 B AIB 8 N ? ? B GLN 8 B AIB 9 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale22 covale both ? B AIB 8 C ? ? ? 1_555 B LEU 9 N ? ? B AIB 9 B LEU 10 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale23 covale one ? B LEU 9 C ? ? ? 1_555 F I77 . N15 ? ? B LEU 10 B I77 101 1_555 ? ? ? ? ? ? ? 1.421 ? ? covale24 covale both ? C LEU 1 C ? ? ? 1_555 C AIB 2 N ? ? C LEU 2 C AIB 3 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale25 covale one ? C LEU 1 N ? ? ? 1_555 J I6W . C02 ? ? C LEU 2 C I6W 103 1_555 ? ? ? ? ? ? ? 1.421 ? ? covale26 covale both ? C AIB 2 C ? ? ? 1_555 C MET 3 N A ? C AIB 3 C MET 4 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale27 covale both ? C AIB 2 C ? ? ? 1_555 C MET 3 N B ? C AIB 3 C MET 4 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale28 covale both ? C MET 3 C A ? ? 1_555 C AIB 4 N ? ? C MET 4 C AIB 5 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale29 covale both ? C MET 3 C B ? ? 1_555 C AIB 4 N ? ? C MET 4 C AIB 5 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale30 covale both ? C AIB 4 C ? ? ? 1_555 C LEU 5 N ? ? C AIB 5 C LEU 6 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale31 covale both ? C LEU 5 C ? ? ? 1_555 C AIB 6 N ? ? C LEU 6 C AIB 7 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale32 covale both ? C AIB 6 C ? ? ? 1_555 C GLN 7 N ? ? C AIB 7 C GLN 8 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale33 covale both ? C GLN 7 C ? ? ? 1_555 C AIB 8 N ? ? C GLN 8 C AIB 9 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale34 covale both ? C AIB 8 C ? ? ? 1_555 C LEU 9 N ? ? C AIB 9 C LEU 10 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale35 covale one ? C LEU 9 C ? ? ? 1_555 I I77 . N15 B ? C LEU 10 C I77 102 1_555 ? ? ? ? ? ? ? 1.428 ? ? covale36 covale one ? C LEU 9 C ? ? ? 1_555 I I77 . N15 A ? C LEU 10 C I77 102 1_555 ? ? ? ? ? ? ? 1.420 ? ? covale37 covale none ? I I77 . N01 B ? ? 1_555 J I6W . N07 ? ? C I77 102 C I6W 103 4_556 ? ? ? ? ? ? ? 1.361 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 C _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 203 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 C _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 204 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.14 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 H011 C I77 102 ? B 1_555 N07 C I6W 103 ? ? 4_556 1.07 2 1 H012 A I77 101 ? B 1_555 N07 B I6W 102 ? ? 2_565 1.28 3 1 H011 A I77 101 ? B 1_555 N07 B I6W 102 ? ? 2_565 1.46 4 1 H012 C I77 102 ? B 1_555 N07 C I6W 103 ? ? 4_556 1.46 5 1 N01 C I77 102 ? B 1_555 C06 C I6W 103 ? ? 4_556 2.00 6 1 N01 A I77 101 ? B 1_555 C06 B I6W 102 ? ? 2_565 2.16 # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y,-z 3 x+1/2,y+1/2,z 4 -x+1/2,y+1/2,-z # _pdbx_entry_details.entry_id 7TM1 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal AIB N N N N 1 AIB CA C N N 2 AIB C C N N 3 AIB O O N N 4 AIB OXT O N N 5 AIB CB1 C N N 6 AIB CB2 C N N 7 AIB H H N N 8 AIB H2 H N N 9 AIB HXT H N N 10 AIB HB11 H N N 11 AIB HB12 H N N 12 AIB HB13 H N N 13 AIB HB21 H N N 14 AIB HB22 H N N 15 AIB HB23 H N N 16 CCN N N N N 17 CCN C1 C N N 18 CCN C2 C N N 19 CCN H21 H N N 20 CCN H22 H N N 21 CCN H23 H N N 22 GLN N N N N 23 GLN CA C N S 24 GLN C C N N 25 GLN O O N N 26 GLN CB C N N 27 GLN CG C N N 28 GLN CD C N N 29 GLN OE1 O N N 30 GLN NE2 N N N 31 GLN OXT O N N 32 GLN H H N N 33 GLN H2 H N N 34 GLN HA H N N 35 GLN HB2 H N N 36 GLN HB3 H N N 37 GLN HG2 H N N 38 GLN HG3 H N N 39 GLN HE21 H N N 40 GLN HE22 H N N 41 GLN HXT H N N 42 HOH O O N N 43 HOH H1 H N N 44 HOH H2 H N N 45 I6W C05 C Y N 46 I6W C08 C Y N 47 I6W C09 C Y N 48 I6W N10 N Y N 49 I6W C02 C N N 50 I6W C03 C Y N 51 I6W C04 C Y N 52 I6W C06 C Y N 53 I6W C11 C Y N 54 I6W C12 C Y N 55 I6W C13 C N N 56 I6W C15 C N N 57 I6W C16 C N N 58 I6W C18 C Y N 59 I6W C19 C Y N 60 I6W N07 N Y N 61 I6W O01 O N N 62 I6W O14 O N N 63 I6W O17 O N N 64 I6W H051 H N N 65 I6W H1 H N N 66 I6W H041 H N N 67 I6W H061 H N N 68 I6W H111 H N N 69 I6W H152 H N N 70 I6W H151 H N N 71 I6W H162 H N N 72 I6W H163 H N N 73 I6W H161 H N N 74 I6W H181 H N N 75 I6W H191 H N N 76 I77 C11 C Y N 77 I77 C12 C Y N 78 I77 C13 C N N 79 I77 C17 C Y N 80 I77 C18 C Y N 81 I77 C02 C N N 82 I77 C03 C Y N 83 I77 C04 C Y N 84 I77 C05 C Y N 85 I77 C06 C Y N 86 I77 C08 C Y N 87 I77 C09 C Y N 88 I77 N01 N N N 89 I77 N07 N Y N 90 I77 N10 N Y N 91 I77 N14 N N N 92 I77 N15 N N N 93 I77 O16 O N N 94 I77 O19 O N N 95 I77 H111 H N N 96 I77 H171 H N N 97 I77 H181 H N N 98 I77 H041 H N N 99 I77 H051 H N N 100 I77 H061 H N N 101 I77 H011 H N N 102 I77 H012 H N N 103 I77 H141 H N N 104 I77 H1 H N N 105 I77 H2 H N N 106 LEU N N N N 107 LEU CA C N S 108 LEU C C N N 109 LEU O O N N 110 LEU CB C N N 111 LEU CG C N N 112 LEU CD1 C N N 113 LEU CD2 C N N 114 LEU OXT O N N 115 LEU H H N N 116 LEU H2 H N N 117 LEU HA H N N 118 LEU HB2 H N N 119 LEU HB3 H N N 120 LEU HG H N N 121 LEU HD11 H N N 122 LEU HD12 H N N 123 LEU HD13 H N N 124 LEU HD21 H N N 125 LEU HD22 H N N 126 LEU HD23 H N N 127 LEU HXT H N N 128 MET N N N N 129 MET CA C N S 130 MET C C N N 131 MET O O N N 132 MET CB C N N 133 MET CG C N N 134 MET SD S N N 135 MET CE C N N 136 MET OXT O N N 137 MET H H N N 138 MET H2 H N N 139 MET HA H N N 140 MET HB2 H N N 141 MET HB3 H N N 142 MET HG2 H N N 143 MET HG3 H N N 144 MET HE1 H N N 145 MET HE2 H N N 146 MET HE3 H N N 147 MET HXT H N N 148 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal AIB N CA sing N N 1 AIB N H sing N N 2 AIB N H2 sing N N 3 AIB CA C sing N N 4 AIB CA CB1 sing N N 5 AIB CA CB2 sing N N 6 AIB C O doub N N 7 AIB C OXT sing N N 8 AIB OXT HXT sing N N 9 AIB CB1 HB11 sing N N 10 AIB CB1 HB12 sing N N 11 AIB CB1 HB13 sing N N 12 AIB CB2 HB21 sing N N 13 AIB CB2 HB22 sing N N 14 AIB CB2 HB23 sing N N 15 CCN N C1 trip N N 16 CCN C1 C2 sing N N 17 CCN C2 H21 sing N N 18 CCN C2 H22 sing N N 19 CCN C2 H23 sing N N 20 GLN N CA sing N N 21 GLN N H sing N N 22 GLN N H2 sing N N 23 GLN CA C sing N N 24 GLN CA CB sing N N 25 GLN CA HA sing N N 26 GLN C O doub N N 27 GLN C OXT sing N N 28 GLN CB CG sing N N 29 GLN CB HB2 sing N N 30 GLN CB HB3 sing N N 31 GLN CG CD sing N N 32 GLN CG HG2 sing N N 33 GLN CG HG3 sing N N 34 GLN CD OE1 doub N N 35 GLN CD NE2 sing N N 36 GLN NE2 HE21 sing N N 37 GLN NE2 HE22 sing N N 38 GLN OXT HXT sing N N 39 HOH O H1 sing N N 40 HOH O H2 sing N N 41 I6W O01 C02 doub N N 42 I6W C02 C03 sing N N 43 I6W C03 C06 doub Y N 44 I6W C03 C04 sing Y N 45 I6W C06 N07 sing Y N 46 I6W C04 C05 doub Y N 47 I6W N07 C08 doub Y N 48 I6W C05 C08 sing Y N 49 I6W C08 C09 sing N N 50 I6W C09 C19 doub Y N 51 I6W C09 N10 sing Y N 52 I6W C19 C18 sing Y N 53 I6W N10 C11 doub Y N 54 I6W C18 C12 doub Y N 55 I6W C11 C12 sing Y N 56 I6W C12 C13 sing N N 57 I6W C13 O17 doub N N 58 I6W C13 O14 sing N N 59 I6W O14 C15 sing N N 60 I6W C15 C16 sing N N 61 I6W C05 H051 sing N N 62 I6W C02 H1 sing N N 63 I6W C04 H041 sing N N 64 I6W C06 H061 sing N N 65 I6W C11 H111 sing N N 66 I6W C15 H152 sing N N 67 I6W C15 H151 sing N N 68 I6W C16 H162 sing N N 69 I6W C16 H163 sing N N 70 I6W C16 H161 sing N N 71 I6W C18 H181 sing N N 72 I6W C19 H191 sing N N 73 I77 N15 N14 sing N N 74 I77 O16 C13 doub N N 75 I77 N14 C13 sing N N 76 I77 C13 C12 sing N N 77 I77 C12 C17 doub Y N 78 I77 C12 C11 sing Y N 79 I77 C17 C18 sing Y N 80 I77 C11 N10 doub Y N 81 I77 C18 C09 doub Y N 82 I77 N10 C09 sing Y N 83 I77 C09 C08 sing N N 84 I77 C08 N07 doub Y N 85 I77 C08 C05 sing Y N 86 I77 N07 C06 sing Y N 87 I77 C05 C04 doub Y N 88 I77 C06 C03 doub Y N 89 I77 C04 C03 sing Y N 90 I77 C03 C02 sing N N 91 I77 C02 N01 sing N N 92 I77 C02 O19 doub N N 93 I77 C11 H111 sing N N 94 I77 C17 H171 sing N N 95 I77 C18 H181 sing N N 96 I77 C04 H041 sing N N 97 I77 C05 H051 sing N N 98 I77 C06 H061 sing N N 99 I77 N01 H011 sing N N 100 I77 N01 H012 sing N N 101 I77 N14 H141 sing N N 102 I77 N15 H1 sing N N 103 I77 N15 H2 sing N N 104 LEU N CA sing N N 105 LEU N H sing N N 106 LEU N H2 sing N N 107 LEU CA C sing N N 108 LEU CA CB sing N N 109 LEU CA HA sing N N 110 LEU C O doub N N 111 LEU C OXT sing N N 112 LEU CB CG sing N N 113 LEU CB HB2 sing N N 114 LEU CB HB3 sing N N 115 LEU CG CD1 sing N N 116 LEU CG CD2 sing N N 117 LEU CG HG sing N N 118 LEU CD1 HD11 sing N N 119 LEU CD1 HD12 sing N N 120 LEU CD1 HD13 sing N N 121 LEU CD2 HD21 sing N N 122 LEU CD2 HD22 sing N N 123 LEU CD2 HD23 sing N N 124 LEU OXT HXT sing N N 125 MET N CA sing N N 126 MET N H sing N N 127 MET N H2 sing N N 128 MET CA C sing N N 129 MET CA CB sing N N 130 MET CA HA sing N N 131 MET C O doub N N 132 MET C OXT sing N N 133 MET CB CG sing N N 134 MET CB HB2 sing N N 135 MET CB HB3 sing N N 136 MET CG SD sing N N 137 MET CG HG2 sing N N 138 MET CG HG3 sing N N 139 MET SD CE sing N N 140 MET CE HE1 sing N N 141 MET CE HE2 sing N N 142 MET CE HE3 sing N N 143 MET OXT HXT sing N N 144 # _pdbx_audit_support.funding_organization 'Department of Energy (DOE, United States)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number DE-AC02-06CH11357 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'energy minimized helix' # _space_group.name_H-M_alt 'C 1 2 1' _space_group.name_Hall 'C 2y' _space_group.IT_number 5 _space_group.crystal_system monoclinic _space_group.id 1 # _atom_sites.entry_id 7TM1 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.012699 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003983 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.086460 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.037559 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_