HEADER ANTIVIRAL PROTEIN, IMMUNE SYSTEM 26-JAN-22 7TQG TITLE CRYSTAL STRUCTURE OF IOMA FAB INFERRED GERMLINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: IOMA IGL FAB HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: IOMA IGL FAB LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS HIV, ANTIBODY, ANTIVIRAL PROTEIN, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR H.B.GRISTICK,P.J.BJORKMAN REVDAT 2 25-OCT-23 7TQG 1 REMARK REVDAT 1 01-MAR-23 7TQG 0 JRNL AUTH H.B.GRISTICK,H.HARTWEGER,M.LOEWE,J.VAN SCHOOTEN,V.RAMOS, JRNL AUTH 2 T.Y.OLIVEIRA,Y.NISHIMURA,N.S.KORANDA,A.WALL,K.H.YAO, JRNL AUTH 3 D.POSTON,A.GAZUMYAN,M.WIATR,M.HORNING,J.R.KEEFFE, JRNL AUTH 4 M.A.G.HOFFMANN,Z.YANG,M.E.ABERNATHY,K.A.DAM,H.GAO, JRNL AUTH 5 P.N.P.GNANAPRAGASAM,L.M.KAKUTANI,A.J.PAVLOVITCH-BEDZYK, JRNL AUTH 6 M.S.SEAMAN,M.HOWARTH,A.T.MCGUIRE,L.STAMATATOS,M.A.MARTIN, JRNL AUTH 7 A.P.WEST JR.,M.C.NUSSENZWEIG,P.J.BJORKMAN JRNL TITL CD4 BINDING SITE IMMUNOGENS ELICIT HETEROLOGOUS ANTI-HIV-1 JRNL TITL 2 NEUTRALIZING ANTIBODIES IN TRANSGENIC AND WILD-TYPE ANIMALS. JRNL REF SCI IMMUNOL V. 8 E6364 2023 JRNL REFN ESSN 2470-9468 JRNL PMID 36763635 JRNL DOI 10.1126/SCIIMMUNOL.ADE6364 REMARK 2 REMARK 2 RESOLUTION. 2.07 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.07 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 39372 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.860 REMARK 3 FREE R VALUE TEST SET COUNT : 1914 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.6300 - 5.0000 0.98 2843 148 0.1796 0.2161 REMARK 3 2 5.0000 - 3.9700 0.99 2729 155 0.1611 0.1851 REMARK 3 3 3.9700 - 3.4700 0.99 2708 127 0.2114 0.2388 REMARK 3 4 3.4700 - 3.1500 0.99 2689 128 0.2535 0.2824 REMARK 3 5 3.1500 - 2.9200 0.99 2701 124 0.2730 0.3241 REMARK 3 6 2.9200 - 2.7500 0.98 2646 127 0.2835 0.3135 REMARK 3 7 2.7500 - 2.6100 0.99 2642 159 0.2894 0.3150 REMARK 3 8 2.6100 - 2.5000 0.99 2653 139 0.2772 0.3575 REMARK 3 9 2.5000 - 2.4000 0.99 2638 153 0.2636 0.3051 REMARK 3 10 2.4000 - 2.3200 0.99 2642 121 0.2730 0.3133 REMARK 3 11 2.3200 - 2.2500 0.99 2645 140 0.2734 0.3037 REMARK 3 12 2.2500 - 2.1800 1.00 2660 129 0.2653 0.3696 REMARK 3 13 2.1800 - 2.1300 0.99 2623 144 0.2586 0.2943 REMARK 3 14 2.1300 - 2.0700 0.99 2639 120 0.2760 0.3347 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.263 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.635 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3288 REMARK 3 ANGLE : 1.002 4487 REMARK 3 CHIRALITY : 0.064 507 REMARK 3 PLANARITY : 0.012 571 REMARK 3 DIHEDRAL : 21.429 461 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN H AND RESID 1:33 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.001 -2.679 -13.527 REMARK 3 T TENSOR REMARK 3 T11: 0.3508 T22: 0.3682 REMARK 3 T33: 0.4027 T12: 0.0304 REMARK 3 T13: 0.0169 T23: -0.0565 REMARK 3 L TENSOR REMARK 3 L11: 4.2349 L22: 1.9952 REMARK 3 L33: 1.6792 L12: 1.1629 REMARK 3 L13: 0.7510 L23: -0.3840 REMARK 3 S TENSOR REMARK 3 S11: -0.1857 S12: 0.0905 S13: -0.6255 REMARK 3 S21: -0.0270 S22: 0.3157 S23: -0.2535 REMARK 3 S31: 0.3839 S32: 0.1984 S33: -0.1038 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN H AND RESID 34:63 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.039 -0.618 -4.636 REMARK 3 T TENSOR REMARK 3 T11: 0.4144 T22: 0.3905 REMARK 3 T33: 0.3588 T12: -0.0356 REMARK 3 T13: -0.0194 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 2.3143 L22: 3.9901 REMARK 3 L33: 4.6513 L12: -0.4212 REMARK 3 L13: 0.8633 L23: -0.5335 REMARK 3 S TENSOR REMARK 3 S11: -0.0379 S12: -0.3989 S13: -0.0018 REMARK 3 S21: 0.1214 S22: -0.0868 S23: -0.0749 REMARK 3 S31: 0.4554 S32: -0.3553 S33: 0.1370 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN H AND RESID 64:82 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.588 -8.657 -8.420 REMARK 3 T TENSOR REMARK 3 T11: 0.6277 T22: 0.4229 REMARK 3 T33: 0.4980 T12: 0.0239 REMARK 3 T13: -0.0417 T23: 0.0273 REMARK 3 L TENSOR REMARK 3 L11: 5.6436 L22: 2.8654 REMARK 3 L33: 4.0761 L12: -0.6739 REMARK 3 L13: -0.0595 L23: 0.0280 REMARK 3 S TENSOR REMARK 3 S11: -0.0059 S12: -0.5946 S13: -0.7194 REMARK 3 S21: 0.0778 S22: 0.1783 S23: -0.1730 REMARK 3 S31: 0.8812 S32: 0.2094 S33: -0.1408 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN H AND RESID 83:112 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.885 2.443 -4.336 REMARK 3 T TENSOR REMARK 3 T11: 0.3585 T22: 0.4084 REMARK 3 T33: 0.4031 T12: -0.0247 REMARK 3 T13: -0.0004 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 1.5745 L22: 1.0306 REMARK 3 L33: 4.6640 L12: 0.3052 REMARK 3 L13: 3.2738 L23: 1.0916 REMARK 3 S TENSOR REMARK 3 S11: 0.2918 S12: -0.2515 S13: -0.3369 REMARK 3 S21: 0.0538 S22: -0.0757 S23: -0.1053 REMARK 3 S31: 0.3933 S32: -0.2702 S33: -0.1616 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN H AND RESID 113:158 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.251 6.621 -33.196 REMARK 3 T TENSOR REMARK 3 T11: 0.3800 T22: 0.2852 REMARK 3 T33: 0.3497 T12: 0.0198 REMARK 3 T13: 0.0115 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 1.3155 L22: 0.5137 REMARK 3 L33: 2.2507 L12: 0.5166 REMARK 3 L13: 0.2281 L23: 0.1050 REMARK 3 S TENSOR REMARK 3 S11: 0.0029 S12: 0.0146 S13: 0.1224 REMARK 3 S21: -0.1768 S22: -0.0375 S23: -0.0320 REMARK 3 S31: -0.0755 S32: 0.0089 S33: 0.0384 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN H AND RESID 159:170 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.694 3.968 -32.340 REMARK 3 T TENSOR REMARK 3 T11: 0.4326 T22: 0.2968 REMARK 3 T33: 0.4148 T12: -0.0954 REMARK 3 T13: -0.0627 T23: -0.0486 REMARK 3 L TENSOR REMARK 3 L11: 4.1954 L22: 1.6379 REMARK 3 L33: 2.4813 L12: 0.9064 REMARK 3 L13: -1.8784 L23: -1.9007 REMARK 3 S TENSOR REMARK 3 S11: 0.3699 S12: -0.2124 S13: -0.5031 REMARK 3 S21: 0.0891 S22: -0.4669 S23: -0.0773 REMARK 3 S31: -0.0360 S32: 0.0103 S33: 0.0413 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN H AND RESID 171:201 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.739 11.217 -36.119 REMARK 3 T TENSOR REMARK 3 T11: 0.4118 T22: 0.3729 REMARK 3 T33: 0.3886 T12: -0.0547 REMARK 3 T13: -0.0048 T23: -0.0160 REMARK 3 L TENSOR REMARK 3 L11: 1.8000 L22: 2.5054 REMARK 3 L33: 1.1776 L12: 0.0400 REMARK 3 L13: -0.9441 L23: -0.1908 REMARK 3 S TENSOR REMARK 3 S11: 0.1660 S12: 0.0831 S13: 0.1535 REMARK 3 S21: 0.1054 S22: -0.0828 S23: -0.1472 REMARK 3 S31: -0.0674 S32: -0.0148 S33: -0.0517 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN H AND RESID 202:226 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.829 3.019 -40.570 REMARK 3 T TENSOR REMARK 3 T11: 0.4736 T22: 0.3494 REMARK 3 T33: 0.5091 T12: -0.0016 REMARK 3 T13: -0.0157 T23: -0.0011 REMARK 3 L TENSOR REMARK 3 L11: 4.0866 L22: 6.8470 REMARK 3 L33: 3.5456 L12: 1.6024 REMARK 3 L13: -1.7641 L23: -2.9302 REMARK 3 S TENSOR REMARK 3 S11: -0.2065 S12: 0.1991 S13: -0.5394 REMARK 3 S21: -0.0343 S22: -0.2550 S23: -1.2491 REMARK 3 S31: 0.1102 S32: 0.0261 S33: 0.4895 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN L AND RESID 3:18 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.201 24.480 -6.546 REMARK 3 T TENSOR REMARK 3 T11: 0.4510 T22: 0.4276 REMARK 3 T33: 0.3491 T12: 0.0639 REMARK 3 T13: 0.0431 T23: -0.0211 REMARK 3 L TENSOR REMARK 3 L11: 3.1236 L22: 7.5955 REMARK 3 L33: 1.8974 L12: 2.8967 REMARK 3 L13: -1.9063 L23: -2.1814 REMARK 3 S TENSOR REMARK 3 S11: 0.4912 S12: -0.0899 S13: 0.2410 REMARK 3 S21: 1.0423 S22: -0.2957 S23: 0.2276 REMARK 3 S31: -0.7597 S32: -0.0863 S33: -0.1904 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: ( CHAIN L AND RESID 19:32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.084 16.474 6.289 REMARK 3 T TENSOR REMARK 3 T11: 0.3265 T22: 0.5604 REMARK 3 T33: 0.3145 T12: -0.0355 REMARK 3 T13: -0.0278 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 1.8069 L22: 1.2834 REMARK 3 L33: 0.3847 L12: 0.0252 REMARK 3 L13: -0.0210 L23: 0.6843 REMARK 3 S TENSOR REMARK 3 S11: 0.1493 S12: -0.2434 S13: 0.0642 REMARK 3 S21: 0.2170 S22: -0.1539 S23: -0.2131 REMARK 3 S31: 0.2456 S32: 0.1412 S33: -0.0144 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: ( CHAIN L AND RESID 33:48 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.979 15.806 -9.306 REMARK 3 T TENSOR REMARK 3 T11: 0.3044 T22: 0.3904 REMARK 3 T33: 0.3127 T12: -0.0188 REMARK 3 T13: 0.0473 T23: -0.0235 REMARK 3 L TENSOR REMARK 3 L11: 3.8673 L22: 4.4432 REMARK 3 L33: 3.6522 L12: 0.3241 REMARK 3 L13: 1.2890 L23: 0.4734 REMARK 3 S TENSOR REMARK 3 S11: 0.1838 S12: 0.3755 S13: 0.1546 REMARK 3 S21: -0.0246 S22: 0.0330 S23: -0.3093 REMARK 3 S31: -0.0199 S32: 0.6116 S33: -0.1960 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: ( CHAIN L AND RESID 49:75 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.042 22.515 0.032 REMARK 3 T TENSOR REMARK 3 T11: 0.3148 T22: 0.4708 REMARK 3 T33: 0.3975 T12: -0.0454 REMARK 3 T13: 0.0236 T23: -0.0329 REMARK 3 L TENSOR REMARK 3 L11: 1.3671 L22: 1.8439 REMARK 3 L33: 1.6737 L12: -1.6370 REMARK 3 L13: 0.7269 L23: -0.5068 REMARK 3 S TENSOR REMARK 3 S11: 0.1013 S12: -0.1637 S13: 0.3926 REMARK 3 S21: -0.0345 S22: -0.1084 S23: -0.2349 REMARK 3 S31: -0.0204 S32: 0.2652 S33: -0.0329 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: ( CHAIN L AND RESID 76:97 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.581 17.562 -6.088 REMARK 3 T TENSOR REMARK 3 T11: 0.3192 T22: 0.4573 REMARK 3 T33: 0.3877 T12: -0.0175 REMARK 3 T13: 0.0304 T23: -0.0181 REMARK 3 L TENSOR REMARK 3 L11: 1.0748 L22: 2.5472 REMARK 3 L33: 2.1809 L12: -0.8256 REMARK 3 L13: 0.4116 L23: -0.1467 REMARK 3 S TENSOR REMARK 3 S11: 0.0745 S12: -0.0037 S13: 0.1013 REMARK 3 S21: 0.0598 S22: 0.0586 S23: -0.2235 REMARK 3 S31: -0.1674 S32: -0.1386 S33: -0.1319 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: ( CHAIN L AND RESID 98:137 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.308 16.405 -35.766 REMARK 3 T TENSOR REMARK 3 T11: 0.4164 T22: 0.2738 REMARK 3 T33: 0.3401 T12: 0.0000 REMARK 3 T13: 0.0156 T23: 0.0173 REMARK 3 L TENSOR REMARK 3 L11: 0.8284 L22: 0.1761 REMARK 3 L33: 1.9616 L12: -0.0357 REMARK 3 L13: 0.1662 L23: -0.0906 REMARK 3 S TENSOR REMARK 3 S11: 0.0163 S12: 0.1086 S13: -0.0119 REMARK 3 S21: -0.1154 S22: -0.0087 S23: 0.1638 REMARK 3 S31: 0.1005 S32: -0.0526 S33: -0.0128 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: ( CHAIN L AND RESID 138:173 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.483 19.789 -34.178 REMARK 3 T TENSOR REMARK 3 T11: 0.4915 T22: 0.3183 REMARK 3 T33: 0.3953 T12: 0.0049 REMARK 3 T13: 0.0769 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.8959 L22: 3.9704 REMARK 3 L33: 2.7048 L12: 0.5351 REMARK 3 L13: -0.3287 L23: -0.3199 REMARK 3 S TENSOR REMARK 3 S11: 0.1800 S12: -0.0700 S13: -0.0172 REMARK 3 S21: 0.6569 S22: -0.0017 S23: 0.2035 REMARK 3 S31: -0.2249 S32: 0.2203 S33: -0.1347 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: ( CHAIN L AND RESID 174:187 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.635 9.652 -47.416 REMARK 3 T TENSOR REMARK 3 T11: 0.4984 T22: 0.4472 REMARK 3 T33: 0.4940 T12: -0.0152 REMARK 3 T13: -0.0861 T23: -0.0571 REMARK 3 L TENSOR REMARK 3 L11: 3.2836 L22: 3.4431 REMARK 3 L33: 5.7728 L12: -0.2581 REMARK 3 L13: 1.3079 L23: 2.5838 REMARK 3 S TENSOR REMARK 3 S11: 0.0222 S12: 0.2709 S13: 0.0828 REMARK 3 S21: -0.0148 S22: -0.5703 S23: 0.7863 REMARK 3 S31: 0.6796 S32: -0.5596 S33: 0.5127 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: ( CHAIN L AND RESID 188:208 ) REMARK 3 ORIGIN FOR THE GROUP (A): -39.083 22.628 -44.676 REMARK 3 T TENSOR REMARK 3 T11: 0.4042 T22: 0.3690 REMARK 3 T33: 0.4328 T12: -0.0107 REMARK 3 T13: -0.0110 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 4.5300 L22: 6.5987 REMARK 3 L33: 5.6522 L12: 0.5334 REMARK 3 L13: 0.0033 L23: 1.9022 REMARK 3 S TENSOR REMARK 3 S11: 0.2861 S12: -0.1242 S13: -0.0008 REMARK 3 S21: -0.1071 S22: -0.0356 S23: 0.8082 REMARK 3 S31: 0.1132 S32: -0.4728 S33: -0.2167 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7TQG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1000262751. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-NOV-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM 7.4 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 7.1.018 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39372 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.070 REMARK 200 RESOLUTION RANGE LOW (A) : 38.630 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.07 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.58000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 5T3Z REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (V/V) PEG 2000, 0.1 M SODIUM REMARK 280 ACETATE (PH 4.6), VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.83600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 83.12450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.35150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 83.12450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.83600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.35150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN L 1 REMARK 465 SER L 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN H 1 CG CD OE1 NE2 REMARK 470 ARG H 83 CG CD NE CZ NH1 NH2 REMARK 470 GLN L 17 CG CD OE1 NE2 REMARK 470 LYS L 156 CG CD CE NZ REMARK 470 GLU L 183 CG CD OE1 OE2 REMARK 470 ARG L 189 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER H 54 -29.47 73.89 REMARK 500 TRP H 107 -1.79 75.00 REMARK 500 PRO H 109 55.13 -103.93 REMARK 500 THR H 144 172.06 60.56 REMARK 500 SER H 145 -122.12 123.83 REMARK 500 PHE H 159 -103.56 -93.81 REMARK 500 ASP L 27B -87.43 -116.32 REMARK 500 ASN L 31 59.01 -98.51 REMARK 500 VAL L 51 -45.56 73.47 REMARK 500 ASN L 60 0.13 -66.38 REMARK 500 ALA L 84 174.52 175.67 REMARK 500 ALA L 92 44.87 -157.31 REMARK 500 SER L 94 -179.17 -178.98 REMARK 500 ASP L 151 -119.81 48.82 REMARK 500 ASN L 170 -0.83 74.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR H 144 SER H 145 130.01 REMARK 500 SER H 145 GLY H 146 -141.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG H 111 0.11 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 7TQG H 1 226 PDB 7TQG 7TQG 1 226 DBREF 7TQG L 1 208 PDB 7TQG 7TQG 1 208 SEQRES 1 H 226 GLN VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 H 226 PRO GLY ALA SER VAL LYS VAL SER CYS LYS ALA SER GLY SEQRES 3 H 226 TYR THR PHE THR GLY TYR TYR MET HIS TRP VAL ARG GLN SEQRES 4 H 226 ALA PRO GLY GLN GLY LEU GLU TRP MET GLY TRP ILE ASN SEQRES 5 H 226 PRO ASN SER GLY GLY THR ASN TYR ALA GLN LYS PHE GLN SEQRES 6 H 226 GLY ARG VAL THR MET THR ARG ASP THR SER ILE SER THR SEQRES 7 H 226 ALA TYR MET GLU LEU SER ARG LEU ARG SER ASP ASP THR SEQRES 8 H 226 ALA VAL TYR TYR CYS ALA ARG GLU MET PHE ASP SER SER SEQRES 9 H 226 ALA ASP TRP SER PRO TRP ARG GLY MET VAL ALA TRP GLY SEQRES 10 H 226 GLN GLY THR LEU VAL THR VAL SER SER ALA SER THR LYS SEQRES 11 H 226 GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SER SEQRES 12 H 226 THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS SEQRES 13 H 226 ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER SEQRES 14 H 226 GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL SEQRES 15 H 226 LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL SEQRES 16 H 226 THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR ILE SEQRES 17 H 226 CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP SEQRES 18 H 226 LYS ARG VAL GLU PRO SEQRES 1 L 210 GLN SER ALA LEU THR GLN PRO ALA SER VAL SER GLY SER SEQRES 2 L 210 PRO GLY GLN SER ILE THR ILE SER CYS THR GLY THR SER SEQRES 3 L 210 SER ASP VAL GLY SER TYR ASN LEU VAL SER TRP TYR GLN SEQRES 4 L 210 GLN HIS PRO GLY LYS ALA PRO LYS LEU MET ILE TYR GLU SEQRES 5 L 210 VAL SER LYS ARG PRO SER GLY VAL SER ASN ARG PHE SER SEQRES 6 L 210 GLY SER LYS SER GLY ASN THR ALA SER LEU THR ILE SER SEQRES 7 L 210 GLY LEU GLN ALA GLU ASP GLU ALA ASP TYR TYR CYS CYS SEQRES 8 L 210 SER TYR ALA GLY SER VAL ALA PHE GLY GLY GLY THR LYS SEQRES 9 L 210 LEU THR VAL LEU GLY GLN PRO LYS ALA ALA PRO SER VAL SEQRES 10 L 210 THR LEU PHE PRO PRO SER SER GLU GLU LEU GLN ALA ASN SEQRES 11 L 210 LYS ALA THR LEU VAL CYS LEU ILE SER ASP PHE TYR PRO SEQRES 12 L 210 GLY ALA VAL THR VAL ALA TRP LYS ALA ASP SER SER PRO SEQRES 13 L 210 VAL LYS ALA GLY VAL GLU THR THR THR PRO SER LYS GLN SEQRES 14 L 210 SER ASN ASN LYS TYR ALA ALA SER SER TYR LEU SER LEU SEQRES 15 L 210 THR PRO GLU GLN TRP LYS SER HIS ARG SER TYR SER CYS SEQRES 16 L 210 GLN VAL THR HIS GLU GLY SER THR VAL GLU LYS THR VAL SEQRES 17 L 210 ALA PRO HELIX 1 AA1 THR H 28 TYR H 32 5 5 HELIX 2 AA2 GLN H 61 GLN H 64 5 4 HELIX 3 AA3 ARG H 83 THR H 87 5 5 HELIX 4 AA4 SER H 169 ALA H 171 5 3 HELIX 5 AA5 SER H 200 LEU H 202 5 3 HELIX 6 AA6 LYS H 214 ASN H 217 5 4 HELIX 7 AA7 GLN L 79 GLU L 83 5 5 HELIX 8 AA8 SER L 121 ALA L 127 1 7 HELIX 9 AA9 THR L 181 SER L 187 1 7 SHEET 1 AA1 4 GLN H 3 GLN H 6 0 SHEET 2 AA1 4 VAL H 18 SER H 25 -1 O LYS H 23 N VAL H 5 SHEET 3 AA1 4 THR H 77 LEU H 82 -1 O MET H 80 N VAL H 20 SHEET 4 AA1 4 VAL H 67 ASP H 72 -1 N ASP H 72 O THR H 77 SHEET 1 AA2 6 GLU H 10 LYS H 12 0 SHEET 2 AA2 6 THR H 120 VAL H 124 1 O THR H 123 N LYS H 12 SHEET 3 AA2 6 ALA H 88 GLU H 95 -1 N TYR H 90 O THR H 120 SHEET 4 AA2 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 91 SHEET 5 AA2 6 LEU H 45 ILE H 51 -1 O MET H 48 N TRP H 36 SHEET 6 AA2 6 THR H 57 TYR H 59 -1 O ASN H 58 N TRP H 50 SHEET 1 AA3 4 GLU H 10 LYS H 12 0 SHEET 2 AA3 4 THR H 120 VAL H 124 1 O THR H 123 N LYS H 12 SHEET 3 AA3 4 ALA H 88 GLU H 95 -1 N TYR H 90 O THR H 120 SHEET 4 AA3 4 MET H 113 TRP H 116 -1 O ALA H 115 N ARG H 94 SHEET 1 AA4 4 SER H 133 SER H 140 0 SHEET 2 AA4 4 THR H 148 TYR H 158 -1 O LYS H 156 N SER H 133 SHEET 3 AA4 4 TYR H 189 PRO H 198 -1 O LEU H 191 N VAL H 155 SHEET 4 AA4 4 VAL H 176 THR H 178 -1 N HIS H 177 O VAL H 194 SHEET 1 AA5 4 SER H 133 SER H 140 0 SHEET 2 AA5 4 THR H 148 TYR H 158 -1 O LYS H 156 N SER H 133 SHEET 3 AA5 4 TYR H 189 PRO H 198 -1 O LEU H 191 N VAL H 155 SHEET 4 AA5 4 VAL H 182 LEU H 183 -1 N VAL H 182 O SER H 190 SHEET 1 AA6 3 THR H 164 TRP H 167 0 SHEET 2 AA6 3 ILE H 208 HIS H 213 -1 O ASN H 210 N SER H 166 SHEET 3 AA6 3 THR H 218 ARG H 223 -1 O VAL H 220 N VAL H 211 SHEET 1 AA7 5 SER L 9 GLY L 13 0 SHEET 2 AA7 5 THR L 101 VAL L 105 1 O THR L 104 N VAL L 11 SHEET 3 AA7 5 ALA L 84 TYR L 91 -1 N ALA L 84 O LEU L 103 SHEET 4 AA7 5 VAL L 33 GLN L 38 -1 N TYR L 36 O TYR L 87 SHEET 5 AA7 5 LYS L 45 ILE L 48 -1 O MET L 47 N TRP L 35 SHEET 1 AA8 4 SER L 9 GLY L 13 0 SHEET 2 AA8 4 THR L 101 VAL L 105 1 O THR L 104 N VAL L 11 SHEET 3 AA8 4 ALA L 84 TYR L 91 -1 N ALA L 84 O LEU L 103 SHEET 4 AA8 4 VAL L 95 PHE L 97 -1 O ALA L 96 N SER L 90 SHEET 1 AA9 3 ILE L 19 THR L 24 0 SHEET 2 AA9 3 THR L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 3 AA9 3 PHE L 62 SER L 67 -1 N SER L 65 O SER L 72 SHEET 1 AB1 4 SER L 114 PHE L 118 0 SHEET 2 AB1 4 ALA L 130 PHE L 139 -1 O LEU L 135 N THR L 116 SHEET 3 AB1 4 TYR L 172 LEU L 180 -1 O TYR L 172 N PHE L 139 SHEET 4 AB1 4 VAL L 159 THR L 161 -1 N GLU L 160 O TYR L 177 SHEET 1 AB2 4 SER L 114 PHE L 118 0 SHEET 2 AB2 4 ALA L 130 PHE L 139 -1 O LEU L 135 N THR L 116 SHEET 3 AB2 4 TYR L 172 LEU L 180 -1 O TYR L 172 N PHE L 139 SHEET 4 AB2 4 SER L 165 LYS L 166 -1 N SER L 165 O ALA L 173 SHEET 1 AB3 4 SER L 153 VAL L 155 0 SHEET 2 AB3 4 THR L 145 ALA L 150 -1 N ALA L 150 O SER L 153 SHEET 3 AB3 4 TYR L 191 HIS L 197 -1 O THR L 196 N THR L 145 SHEET 4 AB3 4 SER L 200 VAL L 206 -1 O VAL L 202 N VAL L 195 SSBOND 1 CYS H 22 CYS H 92 1555 1555 2.06 SSBOND 2 CYS H 153 CYS H 209 1555 1555 2.05 SSBOND 3 CYS L 23 CYS L 88 1555 1555 2.06 SSBOND 4 CYS L 134 CYS L 193 1555 1555 2.05 CISPEP 1 SER H 108 PRO H 109 0 1.90 CISPEP 2 GLU H 161 PRO H 162 0 -1.38 CISPEP 3 TYR L 140 PRO L 141 0 -2.39 CRYST1 57.672 66.703 166.249 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017339 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014992 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006015 0.00000