HEADER TRANSFERASE/TRANSFERASE INHIBITOR 03-FEB-22 7TUN TITLE CRYSTAL STRUCTURE ANALYSIS OF HUMAN CKB COMPLEX WITH A COVALENT TITLE 2 COMPOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: CREATINE KINASE B-TYPE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BRAIN CREATINE KINASE,B-CK,CREATINE KINASE B CHAIN,CREATINE COMPND 5 PHOSPHOKINASE B-TYPE,CPK-B; COMPND 6 EC: 2.7.3.2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CKB, CKBB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS CREATINE KINASE, ATP-BINDING, COVALENT INHIBITOR, CYCTEINE KEYWDS 2 MODIFICATION, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.-S.SEO,S.DHE-PAGANON REVDAT 2 25-OCT-23 7TUN 1 REMARK REVDAT 1 15-FEB-23 7TUN 0 JRNL AUTH H.-S.SEO,S.DHE-PAGANON JRNL TITL CRYSTAL STRUCTURE ANALYSIS OF HUMAN CKB COMPLEX WITH A JRNL TITL 2 COVALENT COMPOUND JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 71.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 18605 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.710 REMARK 3 FREE R VALUE TEST SET COUNT : 876 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 71.5900 - 5.3200 1.00 3147 147 0.1969 0.2200 REMARK 3 2 5.3200 - 4.2300 1.00 2956 153 0.1720 0.2515 REMARK 3 3 4.2300 - 3.6900 1.00 2954 144 0.1888 0.2740 REMARK 3 4 3.6900 - 3.3500 1.00 2902 145 0.2226 0.2501 REMARK 3 5 3.3500 - 3.1100 1.00 2885 142 0.2523 0.3614 REMARK 3 6 3.1100 - 2.9300 1.00 2885 145 0.3189 0.4009 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 75.03 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 80.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 5 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.0641 35.5519 4.6533 REMARK 3 T TENSOR REMARK 3 T11: 0.7107 T22: 0.7559 REMARK 3 T33: 0.7634 T12: -0.0388 REMARK 3 T13: 0.0156 T23: -0.0934 REMARK 3 L TENSOR REMARK 3 L11: 0.5642 L22: 1.2092 REMARK 3 L33: 0.6224 L12: -0.1113 REMARK 3 L13: -0.4016 L23: -0.5044 REMARK 3 S TENSOR REMARK 3 S11: -0.0185 S12: 0.5932 S13: 0.0319 REMARK 3 S21: -0.3577 S22: 0.1070 S23: 0.0830 REMARK 3 S31: -0.6141 S32: 0.0096 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 43 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8054 19.3207 18.5655 REMARK 3 T TENSOR REMARK 3 T11: 0.5857 T22: 0.6615 REMARK 3 T33: 0.6350 T12: -0.0139 REMARK 3 T13: 0.0422 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 1.5187 L22: 0.9387 REMARK 3 L33: 1.8300 L12: -0.2058 REMARK 3 L13: -0.4024 L23: -0.0071 REMARK 3 S TENSOR REMARK 3 S11: -0.0968 S12: -0.0376 S13: -0.2522 REMARK 3 S21: -0.1168 S22: 0.0745 S23: -0.0964 REMARK 3 S31: 0.2610 S32: -0.0764 S33: -0.0003 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 181 THROUGH 286 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.8278 17.4242 22.9563 REMARK 3 T TENSOR REMARK 3 T11: 0.6742 T22: 0.5921 REMARK 3 T33: 0.6080 T12: 0.0086 REMARK 3 T13: 0.0381 T23: -0.0081 REMARK 3 L TENSOR REMARK 3 L11: 2.4521 L22: 0.4849 REMARK 3 L33: 1.7186 L12: -0.4479 REMARK 3 L13: 0.2354 L23: -0.2778 REMARK 3 S TENSOR REMARK 3 S11: -0.0596 S12: -0.0556 S13: -0.0047 REMARK 3 S21: 0.0315 S22: 0.0443 S23: -0.0350 REMARK 3 S31: -0.1774 S32: -0.1638 S33: 0.0004 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 287 THROUGH 381 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.1826 21.3415 41.1590 REMARK 3 T TENSOR REMARK 3 T11: 0.6202 T22: 0.8815 REMARK 3 T33: 0.6719 T12: 0.0703 REMARK 3 T13: 0.0220 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 1.2925 L22: 0.7165 REMARK 3 L33: 1.3960 L12: -0.1280 REMARK 3 L13: -0.9134 L23: 0.4823 REMARK 3 S TENSOR REMARK 3 S11: -0.1285 S12: -0.6067 S13: 0.1644 REMARK 3 S21: 0.1778 S22: 0.0444 S23: -0.0776 REMARK 3 S31: -0.1135 S32: 0.1744 S33: -0.0006 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 5 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.2759 34.2262 -1.4617 REMARK 3 T TENSOR REMARK 3 T11: 0.7598 T22: 0.9251 REMARK 3 T33: 0.6332 T12: -0.1402 REMARK 3 T13: -0.0042 T23: 0.0085 REMARK 3 L TENSOR REMARK 3 L11: 3.2193 L22: 3.0962 REMARK 3 L33: 1.9695 L12: 0.7874 REMARK 3 L13: 0.7827 L23: -1.1297 REMARK 3 S TENSOR REMARK 3 S11: 0.0487 S12: 0.0205 S13: 0.0533 REMARK 3 S21: -0.2304 S22: 0.0773 S23: -0.1427 REMARK 3 S31: 0.0734 S32: 0.0313 S33: 0.0005 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 97 THROUGH 267 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.2633 59.2030 1.7114 REMARK 3 T TENSOR REMARK 3 T11: 0.9482 T22: 0.8693 REMARK 3 T33: 0.8118 T12: 0.0160 REMARK 3 T13: 0.0128 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 2.2625 L22: 1.4177 REMARK 3 L33: 0.7562 L12: -0.6474 REMARK 3 L13: 0.5097 L23: -0.0740 REMARK 3 S TENSOR REMARK 3 S11: -0.2503 S12: -0.2575 S13: 0.4895 REMARK 3 S21: -0.0851 S22: 0.2121 S23: 0.0173 REMARK 3 S31: -0.4519 S32: -0.1731 S33: -0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 268 THROUGH 307 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3580 57.7060 0.0413 REMARK 3 T TENSOR REMARK 3 T11: 0.9386 T22: 1.1770 REMARK 3 T33: 0.7470 T12: 0.1198 REMARK 3 T13: -0.0880 T23: -0.0817 REMARK 3 L TENSOR REMARK 3 L11: 0.4977 L22: 1.6865 REMARK 3 L33: 0.3385 L12: 0.5918 REMARK 3 L13: 0.0474 L23: -0.2197 REMARK 3 S TENSOR REMARK 3 S11: -0.4099 S12: -0.1551 S13: 0.1882 REMARK 3 S21: -0.2611 S22: 0.2030 S23: 0.3808 REMARK 3 S31: -0.5010 S32: -0.1613 S33: -0.0014 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 308 THROUGH 381 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.9450 66.5196 5.7072 REMARK 3 T TENSOR REMARK 3 T11: 1.1083 T22: 1.0565 REMARK 3 T33: 0.9370 T12: 0.2426 REMARK 3 T13: -0.2230 T23: 0.0457 REMARK 3 L TENSOR REMARK 3 L11: 0.3901 L22: 0.8807 REMARK 3 L33: 0.2748 L12: 0.5457 REMARK 3 L13: -0.3050 L23: -0.3450 REMARK 3 S TENSOR REMARK 3 S11: -0.6166 S12: -0.2053 S13: 0.1926 REMARK 3 S21: 0.1462 S22: -0.0795 S23: 0.3900 REMARK 3 S31: -0.3868 S32: -0.2811 S33: 0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7TUN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1000262937. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XIA2 3.5.0 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18694 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.930 REMARK 200 RESOLUTION RANGE LOW (A) : 85.680 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.93 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.98 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 13.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3DRE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7M AMMONIUM CITRATE, PH 7.4, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.43500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 50.62000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 50.62000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 120.65250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 50.62000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 50.62000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 40.21750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 50.62000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.62000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 120.65250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 50.62000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.62000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 40.21750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 80.43500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 PHE A 3 REMARK 465 SER A 4 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 PHE B 3 REMARK 465 SER B 4 REMARK 465 PHE B 192 REMARK 465 LEU B 193 REMARK 465 PHE B 194 REMARK 465 ASP B 195 REMARK 465 GLY B 321 REMARK 465 THR B 322 REMARK 465 GLY B 323 REMARK 465 GLY B 324 REMARK 465 VAL B 325 REMARK 465 ASP B 326 REMARK 465 THR B 327 REMARK 465 ALA B 328 REMARK 465 ALA B 329 REMARK 465 VAL B 330 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 13 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 92 CD1 REMARK 470 ARG A 172 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 177 CD CE NZ REMARK 470 ASP A 195 CG OD1 OD2 REMARK 470 VAL A 198 CG1 CG2 REMARK 470 ASP A 268 CG OD1 OD2 REMARK 470 GLN A 369 CG CD OE1 NE2 REMARK 470 ARG B 13 CG CD NE CZ NH1 NH2 REMARK 470 TYR B 68 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ILE B 69 CG1 CG2 CD1 REMARK 470 LYS B 101 CG CD CE NZ REMARK 470 GLU B 105 CG CD OE1 OE2 REMARK 470 SER B 163 OG REMARK 470 ASP B 166 CG OD1 OD2 REMARK 470 ARG B 172 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 177 CG CD CE NZ REMARK 470 GLU B 181 CG CD OE1 OE2 REMARK 470 GLU B 183 CG CD OE1 OE2 REMARK 470 GLN B 185 CG CD OE1 NE2 REMARK 470 GLN B 186 CG CD OE1 NE2 REMARK 470 LEU B 187 CG CD1 CD2 REMARK 470 ILE B 188 CG1 CG2 CD1 REMARK 470 ASP B 189 CG OD1 OD2 REMARK 470 LYS B 196 CG CD CE NZ REMARK 470 VAL B 198 CG1 CG2 REMARK 470 LYS B 223 CG CD CE NZ REMARK 470 LEU B 226 CG CD1 CD2 REMARK 470 LYS B 265 CG CD CE NZ REMARK 470 LYS B 267 CG CD CE NZ REMARK 470 ASP B 268 CG OD1 OD2 REMARK 470 ARG B 292 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 304 CG CD CE NZ REMARK 470 GLU B 306 CG CD OE1 OE2 REMARK 470 LYS B 307 CG CD CE NZ REMARK 470 SER B 309 OG REMARK 470 VAL B 333 CG1 CG2 REMARK 470 VAL B 336 CG1 CG2 REMARK 470 LYS B 358 CG CD CE NZ REMARK 470 LEU B 359 CG CD1 CD2 REMARK 470 ILE B 361 CG1 CG2 CD1 REMARK 470 GLU B 362 CG CD OE1 OE2 REMARK 470 ARG B 366 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 373 CG1 CG2 CD1 REMARK 470 LEU B 376 CG CD1 CD2 REMARK 470 MET B 377 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS B 11 OD2 ASP B 54 2.08 REMARK 500 OE2 GLU B 155 OH TYR B 173 2.10 REMARK 500 OG SER A 345 O HOH A 501 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET B 240 CG - SD - CE ANGL. DEV. = 12.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 100 109.63 -56.61 REMARK 500 ASP A 122 109.16 -48.50 REMARK 500 ASN A 230 39.65 70.07 REMARK 500 GLU A 231 -65.16 -96.23 REMARK 500 ASP A 326 48.74 -93.69 REMARK 500 THR A 327 -116.96 35.71 REMARK 500 ALA A 328 -75.14 67.72 REMARK 500 ARG A 341 -32.09 -130.28 REMARK 500 ASN B 27 67.74 -102.46 REMARK 500 HIS B 97 56.13 -94.82 REMARK 500 LEU B 376 3.23 -68.93 REMARK 500 REMARK 500 REMARK: NULL DBREF 7TUN A 1 381 UNP P12277 KCRB_HUMAN 1 381 DBREF 7TUN B 1 381 UNP P12277 KCRB_HUMAN 1 381 SEQADV 7TUN MET A -19 UNP P12277 INITIATING METHIONINE SEQADV 7TUN GLY A -18 UNP P12277 EXPRESSION TAG SEQADV 7TUN SER A -17 UNP P12277 EXPRESSION TAG SEQADV 7TUN SER A -16 UNP P12277 EXPRESSION TAG SEQADV 7TUN HIS A -15 UNP P12277 EXPRESSION TAG SEQADV 7TUN HIS A -14 UNP P12277 EXPRESSION TAG SEQADV 7TUN HIS A -13 UNP P12277 EXPRESSION TAG SEQADV 7TUN HIS A -12 UNP P12277 EXPRESSION TAG SEQADV 7TUN HIS A -11 UNP P12277 EXPRESSION TAG SEQADV 7TUN HIS A -10 UNP P12277 EXPRESSION TAG SEQADV 7TUN SER A -9 UNP P12277 EXPRESSION TAG SEQADV 7TUN SER A -8 UNP P12277 EXPRESSION TAG SEQADV 7TUN GLY A -7 UNP P12277 EXPRESSION TAG SEQADV 7TUN GLU A -6 UNP P12277 EXPRESSION TAG SEQADV 7TUN ASN A -5 UNP P12277 EXPRESSION TAG SEQADV 7TUN LEU A -4 UNP P12277 EXPRESSION TAG SEQADV 7TUN TYR A -3 UNP P12277 EXPRESSION TAG SEQADV 7TUN PHE A -2 UNP P12277 EXPRESSION TAG SEQADV 7TUN GLN A -1 UNP P12277 EXPRESSION TAG SEQADV 7TUN GLY A 0 UNP P12277 EXPRESSION TAG SEQADV 7TUN MET B -19 UNP P12277 INITIATING METHIONINE SEQADV 7TUN GLY B -18 UNP P12277 EXPRESSION TAG SEQADV 7TUN SER B -17 UNP P12277 EXPRESSION TAG SEQADV 7TUN SER B -16 UNP P12277 EXPRESSION TAG SEQADV 7TUN HIS B -15 UNP P12277 EXPRESSION TAG SEQADV 7TUN HIS B -14 UNP P12277 EXPRESSION TAG SEQADV 7TUN HIS B -13 UNP P12277 EXPRESSION TAG SEQADV 7TUN HIS B -12 UNP P12277 EXPRESSION TAG SEQADV 7TUN HIS B -11 UNP P12277 EXPRESSION TAG SEQADV 7TUN HIS B -10 UNP P12277 EXPRESSION TAG SEQADV 7TUN SER B -9 UNP P12277 EXPRESSION TAG SEQADV 7TUN SER B -8 UNP P12277 EXPRESSION TAG SEQADV 7TUN GLY B -7 UNP P12277 EXPRESSION TAG SEQADV 7TUN GLU B -6 UNP P12277 EXPRESSION TAG SEQADV 7TUN ASN B -5 UNP P12277 EXPRESSION TAG SEQADV 7TUN LEU B -4 UNP P12277 EXPRESSION TAG SEQADV 7TUN TYR B -3 UNP P12277 EXPRESSION TAG SEQADV 7TUN PHE B -2 UNP P12277 EXPRESSION TAG SEQADV 7TUN GLN B -1 UNP P12277 EXPRESSION TAG SEQADV 7TUN GLY B 0 UNP P12277 EXPRESSION TAG SEQRES 1 A 401 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 401 GLU ASN LEU TYR PHE GLN GLY MET PRO PHE SER ASN SER SEQRES 3 A 401 HIS ASN ALA LEU LYS LEU ARG PHE PRO ALA GLU ASP GLU SEQRES 4 A 401 PHE PRO ASP LEU SER ALA HIS ASN ASN HIS MET ALA LYS SEQRES 5 A 401 VAL LEU THR PRO GLU LEU TYR ALA GLU LEU ARG ALA LYS SEQRES 6 A 401 SER THR PRO SER GLY PHE THR LEU ASP ASP VAL ILE GLN SEQRES 7 A 401 THR GLY VAL ASP ASN PRO GLY HIS PRO TYR ILE MET THR SEQRES 8 A 401 VAL GLY CYS VAL ALA GLY ASP GLU GLU SER TYR GLU VAL SEQRES 9 A 401 PHE LYS ASP LEU PHE ASP PRO ILE ILE GLU ASP ARG HIS SEQRES 10 A 401 GLY GLY TYR LYS PRO SER ASP GLU HIS LYS THR ASP LEU SEQRES 11 A 401 ASN PRO ASP ASN LEU GLN GLY GLY ASP ASP LEU ASP PRO SEQRES 12 A 401 ASN TYR VAL LEU SER SER ARG VAL ARG THR GLY ARG SER SEQRES 13 A 401 ILE ARG GLY PHE CYS LEU PRO PRO HIS CYS SER ARG GLY SEQRES 14 A 401 GLU ARG ARG ALA ILE GLU LYS LEU ALA VAL GLU ALA LEU SEQRES 15 A 401 SER SER LEU ASP GLY ASP LEU ALA GLY ARG TYR TYR ALA SEQRES 16 A 401 LEU LYS SER MET THR GLU ALA GLU GLN GLN GLN LEU ILE SEQRES 17 A 401 ASP ASP HIS PHE LEU PHE ASP LYS PRO VAL SER PRO LEU SEQRES 18 A 401 LEU LEU ALA SER GLY MET ALA ARG ASP TRP PRO ASP ALA SEQRES 19 A 401 ARG GLY ILE TRP HIS ASN ASP ASN LYS THR PHE LEU VAL SEQRES 20 A 401 TRP VAL ASN GLU GLU ASP HIS LEU ARG VAL ILE SER MET SEQRES 21 A 401 GLN LYS GLY GLY ASN MET LYS GLU VAL PHE THR ARG PHE SEQRES 22 A 401 CYS THR GLY LEU THR GLN ILE GLU THR LEU PHE LYS SER SEQRES 23 A 401 LYS ASP TYR GLU PHE MET TRP ASN PRO HIS LEU GLY TYR SEQRES 24 A 401 ILE LEU THR CYS PRO SER ASN LEU GLY THR GLY LEU ARG SEQRES 25 A 401 ALA GLY VAL HIS ILE LYS LEU PRO ASN LEU GLY LYS HIS SEQRES 26 A 401 GLU LYS PHE SER GLU VAL LEU LYS ARG LEU ARG LEU GLN SEQRES 27 A 401 LYS ARG GLY THR GLY GLY VAL ASP THR ALA ALA VAL GLY SEQRES 28 A 401 GLY VAL PHE ASP VAL SER ASN ALA ASP ARG LEU GLY PHE SEQRES 29 A 401 SER GLU VAL GLU LEU VAL GLN MET VAL VAL ASP GLY VAL SEQRES 30 A 401 LYS LEU LEU ILE GLU MET GLU GLN ARG LEU GLU GLN GLY SEQRES 31 A 401 GLN ALA ILE ASP ASP LEU MET PRO ALA GLN LYS SEQRES 1 B 401 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 401 GLU ASN LEU TYR PHE GLN GLY MET PRO PHE SER ASN SER SEQRES 3 B 401 HIS ASN ALA LEU LYS LEU ARG PHE PRO ALA GLU ASP GLU SEQRES 4 B 401 PHE PRO ASP LEU SER ALA HIS ASN ASN HIS MET ALA LYS SEQRES 5 B 401 VAL LEU THR PRO GLU LEU TYR ALA GLU LEU ARG ALA LYS SEQRES 6 B 401 SER THR PRO SER GLY PHE THR LEU ASP ASP VAL ILE GLN SEQRES 7 B 401 THR GLY VAL ASP ASN PRO GLY HIS PRO TYR ILE MET THR SEQRES 8 B 401 VAL GLY CYS VAL ALA GLY ASP GLU GLU SER TYR GLU VAL SEQRES 9 B 401 PHE LYS ASP LEU PHE ASP PRO ILE ILE GLU ASP ARG HIS SEQRES 10 B 401 GLY GLY TYR LYS PRO SER ASP GLU HIS LYS THR ASP LEU SEQRES 11 B 401 ASN PRO ASP ASN LEU GLN GLY GLY ASP ASP LEU ASP PRO SEQRES 12 B 401 ASN TYR VAL LEU SER SER ARG VAL ARG THR GLY ARG SER SEQRES 13 B 401 ILE ARG GLY PHE CYS LEU PRO PRO HIS CYS SER ARG GLY SEQRES 14 B 401 GLU ARG ARG ALA ILE GLU LYS LEU ALA VAL GLU ALA LEU SEQRES 15 B 401 SER SER LEU ASP GLY ASP LEU ALA GLY ARG TYR TYR ALA SEQRES 16 B 401 LEU LYS SER MET THR GLU ALA GLU GLN GLN GLN LEU ILE SEQRES 17 B 401 ASP ASP HIS PHE LEU PHE ASP LYS PRO VAL SER PRO LEU SEQRES 18 B 401 LEU LEU ALA SER GLY MET ALA ARG ASP TRP PRO ASP ALA SEQRES 19 B 401 ARG GLY ILE TRP HIS ASN ASP ASN LYS THR PHE LEU VAL SEQRES 20 B 401 TRP VAL ASN GLU GLU ASP HIS LEU ARG VAL ILE SER MET SEQRES 21 B 401 GLN LYS GLY GLY ASN MET LYS GLU VAL PHE THR ARG PHE SEQRES 22 B 401 CYS THR GLY LEU THR GLN ILE GLU THR LEU PHE LYS SER SEQRES 23 B 401 LYS ASP TYR GLU PHE MET TRP ASN PRO HIS LEU GLY TYR SEQRES 24 B 401 ILE LEU THR CYS PRO SER ASN LEU GLY THR GLY LEU ARG SEQRES 25 B 401 ALA GLY VAL HIS ILE LYS LEU PRO ASN LEU GLY LYS HIS SEQRES 26 B 401 GLU LYS PHE SER GLU VAL LEU LYS ARG LEU ARG LEU GLN SEQRES 27 B 401 LYS ARG GLY THR GLY GLY VAL ASP THR ALA ALA VAL GLY SEQRES 28 B 401 GLY VAL PHE ASP VAL SER ASN ALA ASP ARG LEU GLY PHE SEQRES 29 B 401 SER GLU VAL GLU LEU VAL GLN MET VAL VAL ASP GLY VAL SEQRES 30 B 401 LYS LEU LEU ILE GLU MET GLU GLN ARG LEU GLU GLN GLY SEQRES 31 B 401 GLN ALA ILE ASP ASP LEU MET PRO ALA GLN LYS HET KLU A 401 27 HET KLU B 401 27 HETNAM KLU (2S)-4-(CHLOROACETYL)-3,4-DIHYDRO-2H-1,4-BENZOXAZINE-2- HETNAM 2 KLU CARBOXAMIDE FORMUL 3 KLU 2(C11 H11 CL N2 O3) FORMUL 5 HOH *7(H2 O) HELIX 1 AA1 ASN A 5 ARG A 13 1 9 HELIX 2 AA2 PRO A 15 PHE A 20 1 6 HELIX 3 AA3 ASN A 28 LEU A 34 1 7 HELIX 4 AA4 THR A 35 ARG A 43 1 9 HELIX 5 AA5 THR A 52 ASN A 63 1 12 HELIX 6 AA6 GLU A 80 PHE A 85 1 6 HELIX 7 AA7 PHE A 85 HIS A 97 1 13 HELIX 8 AA8 ASN A 111 LEU A 115 5 5 HELIX 9 AA9 SER A 147 LEU A 165 1 19 HELIX 10 AB1 ASP A 166 LEU A 169 5 4 HELIX 11 AB2 THR A 180 ASP A 190 1 11 HELIX 12 AB3 SER A 199 GLY A 206 1 8 HELIX 13 AB4 ASN A 245 LYS A 267 1 23 HELIX 14 AB5 CYS A 283 LEU A 287 5 5 HELIX 15 AB6 LEU A 299 LYS A 304 1 6 HELIX 16 AB7 LYS A 307 LEU A 315 1 9 HELIX 17 AB8 SER A 345 GLN A 369 1 25 HELIX 18 AB9 SER B 6 PHE B 14 1 9 HELIX 19 AC1 ASN B 28 LEU B 34 1 7 HELIX 20 AC2 THR B 35 ARG B 43 1 9 HELIX 21 AC3 THR B 52 ASN B 63 1 12 HELIX 22 AC4 GLU B 80 PHE B 85 1 6 HELIX 23 AC5 PHE B 85 HIS B 97 1 13 HELIX 24 AC6 ASN B 111 LEU B 115 5 5 HELIX 25 AC7 SER B 147 SER B 164 1 18 HELIX 26 AC8 LEU B 165 LEU B 169 5 5 HELIX 27 AC9 LYS B 177 MET B 179 5 3 HELIX 28 AD1 THR B 180 HIS B 191 1 12 HELIX 29 AD2 SER B 199 ALA B 204 1 6 HELIX 30 AD3 ASN B 245 SER B 266 1 22 HELIX 31 AD4 LEU B 299 LYS B 304 1 6 HELIX 32 AD5 LYS B 307 ARG B 316 1 10 HELIX 33 AD6 SER B 345 GLN B 369 1 25 SHEET 1 AA1 8 GLY A 171 ALA A 175 0 SHEET 2 AA1 8 GLY A 216 ASN A 220 -1 O ILE A 217 N TYR A 174 SHEET 3 AA1 8 PHE A 225 VAL A 229 -1 O VAL A 227 N TRP A 218 SHEET 4 AA1 8 LEU A 235 LYS A 242 -1 O ILE A 238 N LEU A 226 SHEET 5 AA1 8 VAL A 126 ARG A 135 -1 N ARG A 135 O LEU A 235 SHEET 6 AA1 8 ARG A 292 LYS A 298 -1 O HIS A 296 N LEU A 127 SHEET 7 AA1 8 VAL A 333 ASN A 338 -1 O PHE A 334 N ILE A 297 SHEET 8 AA1 8 LEU A 317 THR A 322 -1 N GLN A 318 O SER A 337 SHEET 1 AA2 2 TRP A 273 ASN A 274 0 SHEET 2 AA2 2 GLY A 278 TYR A 279 -1 O GLY A 278 N ASN A 274 SHEET 1 AA3 8 GLY B 171 ALA B 175 0 SHEET 2 AA3 8 GLY B 216 ASN B 220 -1 O ILE B 217 N TYR B 174 SHEET 3 AA3 8 PHE B 225 VAL B 229 -1 O VAL B 229 N GLY B 216 SHEET 4 AA3 8 LEU B 235 LYS B 242 -1 O ILE B 238 N LEU B 226 SHEET 5 AA3 8 VAL B 126 ARG B 135 -1 N SER B 129 O GLN B 241 SHEET 6 AA3 8 ARG B 292 LYS B 298 -1 O ARG B 292 N ARG B 132 SHEET 7 AA3 8 VAL B 333 ASN B 338 -1 O PHE B 334 N ILE B 297 SHEET 8 AA3 8 LEU B 317 LYS B 319 -1 N GLN B 318 O SER B 337 SHEET 1 AA4 2 TRP B 273 ASN B 274 0 SHEET 2 AA4 2 GLY B 278 TYR B 279 -1 O GLY B 278 N ASN B 274 LINK SG CYS A 283 C5 KLU A 401 1555 1555 1.56 LINK SG CYS B 283 C5 KLU B 401 1555 1555 1.82 CISPEP 1 TRP A 211 PRO A 212 0 3.38 CRYST1 101.240 101.240 160.870 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009878 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009878 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006216 0.00000