HEADER PROTEIN BINDING 10-FEB-22 7TXX TITLE SOLUTION STRUCTURE FOR BARTONELLA HENSELAE BAME, A COMPONENT OF THE TITLE 2 BETA-BARREL ASSEMBLY MACHINERY COMPLEX. SEATTLE STRUCTURAL GENOMICS TITLE 3 CENTER FOR INFECTIOUS DISEASE TARGET BAHEA.17605.A COMPND MOL_ID: 1; COMPND 2 MOLECULE: BA5; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BARTONELLA HENSELAE STR. HOUSTON-1; SOURCE 3 ORGANISM_TAXID: 283166; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21 KEYWDS BAM COMPLEX, OUTER MEMBRANE BIOGENESIS, STRUCTURAL GENOMICS, SEATTLE KEYWDS 2 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, SSGCID, PROTEIN KEYWDS 3 BINDING EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR G.W.BUCHKO,SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE AUTHOR 2 (SSGCID) REVDAT 3 15-MAY-24 7TXX 1 REMARK REVDAT 2 14-JUN-23 7TXX 1 REMARK REVDAT 1 02-MAR-22 7TXX 0 JRNL AUTH G.W.BUCHKO,W.C.VAN VOORHIS,P.J.MYLER JRNL TITL STRUCTURAL CHARACTERIZATION OF BARTONELLA HENSELAE BAME, A JRNL TITL 2 COMPONENT OF THE BETA-BARREL ASSEMBLY MACHINERY COMPLEX JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, CNS REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURE DETERMINATION WAS PERFORMED REMARK 3 ITERATIVELY USING CYANA (AUTOMATED NOESY ASSIGNMENTS). A TOTAL REMARK 3 OF 20 STRUCTURES OUT OF 100 WITH LOWEST TARGET FUNCTION FROM THE REMARK 3 FINAL CYANA CALCULATION WERE TAKEN AND REFINED BY RESTRAINED REMARK 3 MOLECULAR DYNAMICS/ENERGY MINIMIZATION IN EXPLICIT WATER (CNS) REMARK 3 AFTER ADDING 2% TO THE UPPER BOUNDARY LIMIT OF THE DISTANCE REMARK 3 RESTRAINTS AND THE VDW REMARK 4 REMARK 4 7TXX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1000263101. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 120 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-99% 13C; U-99% 15N] BA5, REMARK 210 100 MM SODIUM CHLORIDE, 20 MM REMARK 210 TRIS, 1 MM DTT, 93% H2O/7% D2O; REMARK 210 1 MM [U-99% 13C; U-99% 15N] BA5, REMARK 210 100 MM SODIUM CHLORIDE, 20 MM REMARK 210 TRIS, 1 MM DTT, 100% D2O; 1 MM REMARK 210 [U-10% 13C; U-99% 15N] BA5, 100 REMARK 210 MM SODIUM CHLORIDE, 20 MM TRIS, REMARK 210 1 MM DTT, 93% H2O/7% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC; 3D 1H-15N NOESY; 3D REMARK 210 C(CO)NH; 3D HNCACB; 3D 1H-15N REMARK 210 TOCSY; 3D HCCH-TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ; 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : VXRS; AVANCE II REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : FELIX 2007, NMRFAM-SPARKY 1.414, REMARK 210 PSVS 1.5, TALOS+ REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 67 -19.09 -44.97 REMARK 500 1 ARG A 78 -161.73 -115.62 REMARK 500 1 ARG A 92 24.82 -148.71 REMARK 500 1 LYS A 101 -8.80 -55.06 REMARK 500 1 ALA A 144 84.30 -64.00 REMARK 500 2 HIS A 6 131.66 -175.64 REMARK 500 2 ASP A 67 -17.72 -45.81 REMARK 500 2 ILE A 90 93.86 -60.40 REMARK 500 2 ARG A 92 34.22 -167.28 REMARK 500 2 LYS A 101 -3.56 -58.42 REMARK 500 2 ASP A 115 31.42 39.54 REMARK 500 2 THR A 130 98.21 -58.91 REMARK 500 2 ALA A 144 31.07 -85.71 REMARK 500 3 ALA A 2 -76.89 62.32 REMARK 500 3 ALA A 14 97.11 -170.46 REMARK 500 3 PRO A 19 -71.86 -73.54 REMARK 500 3 ARG A 80 107.50 69.88 REMARK 500 3 MET A 85 -71.45 -104.24 REMARK 500 3 ARG A 92 38.07 -142.77 REMARK 500 3 ASP A 103 37.08 71.12 REMARK 500 3 ALA A 144 88.86 -67.52 REMARK 500 4 MET A 9 -60.61 73.08 REMARK 500 4 SER A 24 101.80 -171.12 REMARK 500 4 LYS A 31 78.95 -167.45 REMARK 500 4 TYR A 79 91.39 48.50 REMARK 500 4 LYS A 101 -5.30 -54.62 REMARK 500 4 GLN A 124 23.99 47.39 REMARK 500 5 ALA A 2 18.64 -152.13 REMARK 500 5 SER A 27 93.43 -170.17 REMARK 500 5 SER A 43 1.44 -68.35 REMARK 500 5 ASP A 67 -18.87 -45.38 REMARK 500 5 ILE A 74 -34.69 -134.38 REMARK 500 5 ARG A 78 34.91 -152.71 REMARK 500 5 GLN A 83 72.04 56.43 REMARK 500 5 LYS A 101 -9.61 -55.83 REMARK 500 5 THR A 130 98.72 -61.41 REMARK 500 5 LYS A 131 -6.62 -49.96 REMARK 500 5 PRO A 134 46.54 -87.11 REMARK 500 5 ASN A 145 103.36 -55.22 REMARK 500 6 HIS A 3 108.42 70.25 REMARK 500 6 ALA A 14 150.48 178.41 REMARK 500 6 TYR A 34 115.13 72.11 REMARK 500 6 LEU A 36 71.99 -69.26 REMARK 500 6 ASP A 67 -17.89 -44.88 REMARK 500 6 ILE A 74 -155.11 -154.48 REMARK 500 6 MET A 82 96.75 -167.33 REMARK 500 6 ASP A 91 70.42 54.24 REMARK 500 6 LYS A 101 -3.05 -57.32 REMARK 500 6 PRO A 134 58.16 -93.44 REMARK 500 6 ALA A 144 15.42 57.87 REMARK 500 REMARK 500 THIS ENTRY HAS 211 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 134 LEU A 135 5 -148.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30993 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE FOR BARTONELLA HENSELAE BAME, A COMPONENT OF THE REMARK 900 BETA-BARREL ASSEMBLY MACHINERY COMPLEX. SEATTLE STRUCTURAL GENOMICS REMARK 900 CENTER FOR INFECTIOUS DISEASE TARGET BAHEA.17605.A DBREF 7TXX A 1 147 PDB 7TXX 7TXX 1 147 SEQRES 1 A 147 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 A 147 ALA GLN THR GLN GLY PRO GLY SER MET SER SER GLY SER SEQRES 3 A 147 SER GLN ILE TYR LYS GLU GLY TYR ILE LEU ASP LYS ASN SEQRES 4 A 147 ALA LEU ASP SER ILE SER ILE GLY SER SER GLN GLU GLN SEQRES 5 A 147 VAL ILE LEU ALA LEU GLY THR PRO SER LEU LYS THR LYS SEQRES 6 A 147 TYR ASP ASN GLU VAL PHE TYR TYR ILE SER GLN THR ARG SEQRES 7 A 147 TYR ARG GLY MET GLN PHE MET LYS THR LYS ILE ILE ASP SEQRES 8 A 147 ARG LYS VAL LEU ALA ILE TYR PHE ASN LYS ASN ASP GLN SEQRES 9 A 147 VAL THR LYS ILE ALA ASN TYR GLY LEU GLN ASP GLY GLN SEQRES 10 A 147 VAL PHE ASP PHE ILE ALA GLN THR THR PRO THR ALA THR SEQRES 11 A 147 LYS GLU GLN PRO LEU LEU ILE GLN ILE ILE LYS GLY PRO SEQRES 12 A 147 ALA ASN LEU PRO HELIX 1 AA1 ASN A 39 ILE A 44 5 6 HELIX 2 AA2 SER A 49 GLY A 58 1 10 HELIX 3 AA3 ILE A 137 GLY A 142 1 6 SHEET 1 AA1 4 LEU A 62 THR A 64 0 SHEET 2 AA1 4 VAL A 70 ILE A 74 -1 O TYR A 72 N LEU A 62 SHEET 3 AA1 4 VAL A 94 ASN A 100 -1 O ILE A 97 N PHE A 71 SHEET 4 AA1 4 GLN A 104 ASN A 110 -1 O GLN A 104 N ASN A 100 SHEET 1 AA2 2 LEU A 113 GLN A 114 0 SHEET 2 AA2 2 GLN A 117 VAL A 118 -1 O GLN A 117 N GLN A 114 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1