HEADER SURFACTANT PROTEIN 15-FEB-22 7TZ3 TITLE ITURIN FROM BACILLUS SUBTILIS ATCC 19659 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ITURIN LIPOPEPTIDE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 ATCC: 19659; SOURCE 5 EXPRESSION_SYSTEM: BACILLUS SUBTILIS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 1423; SOURCE 7 EXPRESSION_SYSTEM_ATCC_NUMBER: 19659 KEYWDS BIOSURFACTANT, LIPOPEPTIDE, SURFACTANT PROTEIN EXPDTA SOLUTION NMR NUMMDL 17 AUTHOR B.M.SILVA,M.T.Q.DE MAGALHAES,J.T.RODRIGUES REVDAT 2 15-NOV-23 7TZ3 1 ATOM REVDAT 1 01-MAR-23 7TZ3 0 JRNL AUTH B.M.SILVA,M.T.Q.DE MAGALHAES,J.T.RODRIGUES JRNL TITL ITURIN FROM BACILLUS SUBTILIS ATCC 19659 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS, ARIA REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 (CNS), LINGE, O'DONOGHUE AND NILGES (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: USED A CARTESIAN DYNAMICS SIMULATION REMARK 3 INSTEAD OF TORSION ANGLE PRESENT IN ARIA2 SOFTWARE REMARK 4 REMARK 4 7TZ3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1000263154. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 313 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.007 MG/UL ITURIN LIPOPEPTIDE, REMARK 210 90% DMSO-D6/10% H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H TOCSY; 2D 1H-1H NOESY; REMARK 210 2D 1H-13C HSQC; 2D 1H-15N HSQC; REMARK 210 2D 1H-1H COSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE NEO REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : CCPNMR ANALYSIS 2.5.2, TOPSPIN, REMARK 210 CNS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 6000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 17 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 DTY A 2 144.23 130.30 REMARK 500 1 DSG A 6 112.52 -34.64 REMARK 500 1 SER A 7 104.74 -178.18 REMARK 500 2 DSG A 6 141.51 -37.65 REMARK 500 2 SER A 7 64.72 64.41 REMARK 500 3 DTY A 2 138.91 113.13 REMARK 500 3 DSG A 3 32.46 -73.28 REMARK 500 3 PRO A 5 154.02 -43.48 REMARK 500 3 DSG A 6 107.52 -31.38 REMARK 500 3 SER A 7 29.77 -157.20 REMARK 500 4 DSG A 6 143.29 -36.32 REMARK 500 4 SER A 7 69.94 62.98 REMARK 500 5 DTY A 2 -36.34 -177.48 REMARK 500 5 DSG A 6 108.13 -31.90 REMARK 500 5 SER A 7 52.47 -178.94 REMARK 500 6 PRO A 5 167.97 -49.57 REMARK 500 6 DSG A 6 137.37 -36.24 REMARK 500 6 SER A 7 34.90 71.52 REMARK 500 7 DTY A 2 143.86 155.68 REMARK 500 7 DSG A 3 36.74 -73.93 REMARK 500 7 DSG A 6 107.53 -31.34 REMARK 500 7 SER A 7 50.49 -156.38 REMARK 500 8 DSG A 3 -62.00 -65.38 REMARK 500 8 PRO A 5 156.40 -46.38 REMARK 500 8 DSG A 6 109.59 -33.07 REMARK 500 8 SER A 7 31.11 -177.72 REMARK 500 9 DSG A 6 145.99 -40.48 REMARK 500 10 DSG A 3 33.81 -83.30 REMARK 500 10 DSG A 6 123.06 -39.08 REMARK 500 11 DSG A 6 109.22 -30.43 REMARK 500 11 SER A 7 100.68 84.43 REMARK 500 12 DTY A 2 149.46 121.24 REMARK 500 12 DSG A 3 38.22 -75.48 REMARK 500 12 DSG A 6 106.73 -33.09 REMARK 500 12 SER A 7 36.23 -164.68 REMARK 500 13 DTY A 2 148.35 165.61 REMARK 500 13 PRO A 5 160.86 -41.04 REMARK 500 13 DSG A 6 120.67 -30.89 REMARK 500 13 SER A 7 43.77 -164.12 REMARK 500 14 DSG A 6 111.77 -31.03 REMARK 500 14 SER A 7 23.86 179.13 REMARK 500 15 DSG A 6 151.09 -38.42 REMARK 500 16 DTY A 2 155.15 159.63 REMARK 500 16 DSG A 6 106.39 -29.89 REMARK 500 16 SER A 7 57.38 -156.56 REMARK 500 17 DTY A 2 131.82 98.17 REMARK 500 17 DSG A 3 19.93 -71.80 REMARK 500 17 PRO A 5 152.25 -49.07 REMARK 500 17 DSG A 6 105.87 -30.90 REMARK 500 17 SER A 7 24.02 -150.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER A 7 KV6 A 8 1 143.50 REMARK 500 SER A 7 KV6 A 8 2 149.81 REMARK 500 SER A 7 KV6 A 8 3 147.10 REMARK 500 SER A 7 KV6 A 8 5 148.44 REMARK 500 SER A 7 KV6 A 8 6 -140.86 REMARK 500 SER A 7 KV6 A 8 7 146.43 REMARK 500 SER A 7 KV6 A 8 8 147.69 REMARK 500 SER A 7 KV6 A 8 10 132.50 REMARK 500 SER A 7 KV6 A 8 11 149.58 REMARK 500 SER A 7 KV6 A 8 12 142.16 REMARK 500 SER A 7 KV6 A 8 13 148.77 REMARK 500 SER A 7 KV6 A 8 14 145.98 REMARK 500 SER A 7 KV6 A 8 16 145.68 REMARK 500 SER A 7 KV6 A 8 17 148.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30994 RELATED DB: BMRB REMARK 900 ITURIN FROM BACILLUS SUBTILIS ATCC 19659 DBREF 7TZ3 A 1 8 PDB 7TZ3 7TZ3 1 8 SEQRES 1 A 8 ASN DTY DSG GLN PRO DSG SER KV6 HET DTY A 2 21 HET DSG A 3 14 HET DSG A 6 14 HET KV6 A 8 52 HETNAM DTY D-TYROSINE HETNAM DSG D-ASPARAGINE HETNAM KV6 (3R)-3-AMINOHEPTADECANOIC ACID HETSYN KV6 N-[(2S,3R,4R,5S,6R)-5-[(2S,3R,4R,5S,6R)-3-ACETAMIDO-5- HETSYN 2 KV6 [(2S,3S,4S,5R,6R)-4-[(2S,4S,5S,6R)-4,5-DIHYDROXY-6- HETSYN 3 KV6 (HYDROXYMETHYL )-3-OXO-OXAN-2-YL]OXY-3,5-DIHYDROXY-6- HETSYN 4 KV6 [[(2S,3S,4S,5S,6R)-3,4,5-TRIHYDROXY-6-(HYDROXYMETHYL) HETSYN 5 KV6 OXAN-2-YL]OXYMETHYL]OXAN-2-YL ]OXY-4-HYDROXY-6- HETSYN 6 KV6 (HYDROXYMETHYL)OXAN-2-YL]OXY-2,4-DIHYDROXY-6- HETSYN 7 KV6 (HYDROXYMETHYL)OXAN-3-YL]ETHANAMIDE FORMUL 1 DTY C9 H11 N O3 FORMUL 1 DSG 2(C4 H8 N2 O3) FORMUL 1 KV6 C17 H35 N O2 LINK C ASN A 1 N DTY A 2 1555 1555 1.31 LINK N ASN A 1 C KV6 A 8 1555 1555 1.32 LINK C DTY A 2 N DSG A 3 1555 1555 1.33 LINK C DSG A 3 N GLN A 4 1555 1555 1.33 LINK C PRO A 5 N DSG A 6 1555 1555 1.34 LINK C DSG A 6 N SER A 7 1555 1555 1.33 LINK C SER A 7 N KV6 A 8 1555 1555 1.32 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1