HEADER PROTEIN BINDING 15-FEB-22 7TZK TITLE EPS8 SH3 DOMAIN WITH NLEH1 PXXDY MOTIF COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE 8; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: T3SS SECRETED EFFECTOR NLEH HOMOLOG; COMPND 7 CHAIN: C, D; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EPS8; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI O127:H6 STR. E2348/69; SOURCE 11 ORGANISM_TAXID: 574521 KEYWDS NLEH KINASE, PROTEIN-PROTEIN INTERACTION, SH3 DOMAIN, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR A.M.GRISHIN,M.CYGLER REVDAT 3 18-OCT-23 7TZK 1 REMARK REVDAT 2 31-AUG-22 7TZK 1 JRNL REVDAT 1 06-JUL-22 7TZK 0 JRNL AUTH G.L.POLLOCK,A.M.GRISHIN,C.GIOGHA,J.GAN,C.V.OATES, JRNL AUTH 2 P.J.MCMILLAN,I.GAETA,M.J.TYSKA,J.S.PEARSON,N.E.SCOTT, JRNL AUTH 3 M.CYGLER,E.L.HARTLAND JRNL TITL TARGETING OF MICROVILLUS PROTEIN EPS8 BY THE NLEH EFFECTOR JRNL TITL 2 KINASES FROM ENTEROPATHOGENIC E. COLI JRNL REF PROC.NATL.ACAD.SCI.USA V. 119 32119 2022 JRNL REFN ESSN 1091-6490 JRNL PMID 35976880 JRNL DOI 10.1073/PNAS.2204332119 REMARK 2 REMARK 2 RESOLUTION. 1.43 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20_4459 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.43 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 23067 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.740 REMARK 3 FREE R VALUE TEST SET COUNT : 2016 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.2800 - 3.4500 0.99 1571 153 0.1732 0.2002 REMARK 3 2 3.4500 - 2.7400 0.98 1516 141 0.1636 0.1940 REMARK 3 3 2.7400 - 2.3900 0.98 1508 149 0.1946 0.2373 REMARK 3 4 2.3900 - 2.1700 0.98 1486 146 0.1750 0.1905 REMARK 3 5 2.1700 - 2.0200 0.99 1511 142 0.1741 0.2302 REMARK 3 6 2.0200 - 1.9000 0.98 1485 133 0.1826 0.2431 REMARK 3 7 1.9000 - 1.8000 0.99 1516 146 0.2030 0.2777 REMARK 3 8 1.8000 - 1.7200 0.99 1482 143 0.2400 0.3019 REMARK 3 9 1.7200 - 1.6600 0.99 1495 142 0.2516 0.3032 REMARK 3 10 1.6600 - 1.6000 0.99 1510 138 0.2463 0.2788 REMARK 3 11 1.6000 - 1.5500 1.00 1501 147 0.2586 0.2988 REMARK 3 12 1.5500 - 1.5100 0.99 1489 141 0.2991 0.3822 REMARK 3 13 1.5100 - 1.4700 0.99 1489 147 0.3534 0.3532 REMARK 3 14 1.4700 - 1.4300 0.99 1492 148 0.3921 0.4064 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.710 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.35 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID -2:543 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.139 -1.173 18.508 REMARK 3 T TENSOR REMARK 3 T11: 0.1649 T22: 0.1548 REMARK 3 T33: 0.1673 T12: 0.0111 REMARK 3 T13: -0.0166 T23: -0.0053 REMARK 3 L TENSOR REMARK 3 L11: 0.9135 L22: 1.2753 REMARK 3 L33: 4.0279 L12: -0.2120 REMARK 3 L13: -1.6592 L23: 1.4059 REMARK 3 S TENSOR REMARK 3 S11: -0.0320 S12: 0.1342 S13: -0.0778 REMARK 3 S21: -0.0496 S22: -0.0245 S23: -0.0296 REMARK 3 S31: 0.2062 S32: -0.1716 S33: -0.0428 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 544:576 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.231 -4.282 26.130 REMARK 3 T TENSOR REMARK 3 T11: 0.1367 T22: 0.1328 REMARK 3 T33: 0.1352 T12: 0.0086 REMARK 3 T13: -0.0088 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 1.5519 L22: 1.2282 REMARK 3 L33: 1.1876 L12: 0.0942 REMARK 3 L13: -0.2609 L23: 0.3565 REMARK 3 S TENSOR REMARK 3 S11: 0.0130 S12: 0.0347 S13: -0.0702 REMARK 3 S21: 0.0269 S22: -0.0427 S23: 0.0594 REMARK 3 S31: -0.0099 S32: 0.0294 S33: 0.0364 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 577:591 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.390 -2.370 21.025 REMARK 3 T TENSOR REMARK 3 T11: 0.1322 T22: 0.1768 REMARK 3 T33: 0.1618 T12: 0.0111 REMARK 3 T13: 0.0026 T23: 0.0153 REMARK 3 L TENSOR REMARK 3 L11: 1.6191 L22: 2.2335 REMARK 3 L33: 2.4439 L12: -0.9156 REMARK 3 L13: 1.7594 L23: -0.3955 REMARK 3 S TENSOR REMARK 3 S11: 0.0467 S12: 0.4397 S13: 0.0353 REMARK 3 S21: -0.2808 S22: -0.1373 S23: -0.0844 REMARK 3 S31: 0.0389 S32: 0.1273 S33: 0.1462 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN B AND RESID -2:543 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.242 -7.027 -3.625 REMARK 3 T TENSOR REMARK 3 T11: 0.2374 T22: 0.1725 REMARK 3 T33: 0.1575 T12: 0.0133 REMARK 3 T13: -0.0078 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 0.2300 L22: 1.0305 REMARK 3 L33: 4.7677 L12: 0.3338 REMARK 3 L13: -0.4974 L23: -1.7470 REMARK 3 S TENSOR REMARK 3 S11: -0.0311 S12: 0.1313 S13: 0.0239 REMARK 3 S21: -0.1839 S22: -0.0801 S23: -0.0707 REMARK 3 S31: 0.0153 S32: 0.1264 S33: 0.1994 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN B AND RESID 544:576 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.285 -4.449 2.950 REMARK 3 T TENSOR REMARK 3 T11: 0.2067 T22: 0.1457 REMARK 3 T33: 0.1223 T12: 0.0059 REMARK 3 T13: -0.0018 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 1.3312 L22: 1.2547 REMARK 3 L33: 1.2061 L12: 0.1232 REMARK 3 L13: 0.4129 L23: -0.1215 REMARK 3 S TENSOR REMARK 3 S11: -0.0241 S12: -0.0437 S13: 0.0828 REMARK 3 S21: -0.0429 S22: -0.0409 S23: 0.0090 REMARK 3 S31: -0.0489 S32: -0.0272 S33: 0.0709 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: ( CHAIN B AND RESID 577:591 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.559 -6.335 1.182 REMARK 3 T TENSOR REMARK 3 T11: 0.2360 T22: 0.2058 REMARK 3 T33: 0.1507 T12: -0.0015 REMARK 3 T13: 0.0275 T23: 0.0132 REMARK 3 L TENSOR REMARK 3 L11: 3.8856 L22: 3.0877 REMARK 3 L33: 1.6504 L12: -0.1653 REMARK 3 L13: -0.5069 L23: -0.0411 REMARK 3 S TENSOR REMARK 3 S11: 0.0066 S12: 0.4156 S13: 0.0575 REMARK 3 S21: -0.3313 S22: -0.1065 S23: -0.3409 REMARK 3 S31: -0.0707 S32: 0.1643 S33: 0.0590 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: ( CHAIN C AND RESID 121:132 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.465 -8.433 33.224 REMARK 3 T TENSOR REMARK 3 T11: 0.2154 T22: 0.1884 REMARK 3 T33: 0.2058 T12: 0.0044 REMARK 3 T13: 0.0490 T23: 0.0481 REMARK 3 L TENSOR REMARK 3 L11: 1.2798 L22: 4.0446 REMARK 3 L33: 3.2497 L12: 0.0827 REMARK 3 L13: 1.2621 L23: -1.2308 REMARK 3 S TENSOR REMARK 3 S11: -0.4059 S12: -0.1552 S13: -0.1338 REMARK 3 S21: 0.2680 S22: 0.1524 S23: 0.2884 REMARK 3 S31: -0.1362 S32: 0.0693 S33: 0.1883 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: ( CHAIN D AND RESID 121:132 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.823 -0.216 13.094 REMARK 3 T TENSOR REMARK 3 T11: 0.1978 T22: 0.1525 REMARK 3 T33: 0.1484 T12: -0.0109 REMARK 3 T13: -0.0171 T23: -0.0195 REMARK 3 L TENSOR REMARK 3 L11: 4.2435 L22: 3.5453 REMARK 3 L33: 3.7617 L12: -1.2072 REMARK 3 L13: 0.3693 L23: -0.8958 REMARK 3 S TENSOR REMARK 3 S11: -0.0679 S12: -0.2673 S13: -0.1048 REMARK 3 S21: 0.0851 S22: -0.0546 S23: 0.0550 REMARK 3 S31: -0.0458 S32: -0.1281 S33: 0.0748 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: ( CHAIN A AND RESID 601:723 ) OR ( CHAIN B AND RESID REMARK 3 601:729 ) OR ( CHAIN C AND RESID 201:225 ) OR ( REMARK 3 CHAIN D AND RESID 201:224 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.417 -4.301 13.332 REMARK 3 T TENSOR REMARK 3 T11: 0.1921 T22: 0.1881 REMARK 3 T33: 0.1809 T12: 0.0009 REMARK 3 T13: -0.0008 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 0.1307 L22: 0.0562 REMARK 3 L33: 0.0977 L12: -0.0907 REMARK 3 L13: 0.1175 L23: -0.0756 REMARK 3 S TENSOR REMARK 3 S11: 0.0158 S12: -0.0032 S13: -0.0141 REMARK 3 S21: -0.0536 S22: 0.0139 S23: 0.0112 REMARK 3 S31: 0.0103 S32: -0.0172 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 7TZK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-FEB-22. REMARK 100 THE DEPOSITION ID IS D_1000263002. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-AUG-20 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08B1-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.18064 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23092 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.430 REMARK 200 RESOLUTION RANGE LOW (A) : 35.280 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.05600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.43 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 1.04200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1I0C REMARK 200 REMARK 200 REMARK: PLATES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 32.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35% PEG 8,000, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 17.64000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1000 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 534 CD CE NZ REMARK 470 ARG A 589 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 589 CG CD NE CZ NH1 NH2 REMARK 470 SER C 131 OG REMARK 470 LEU C 132 CG CD1 CD2 REMARK 470 LEU D 132 CB CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ3 LYS B 569 O HOH B 605 1.57 REMARK 500 OE1 GLN A 531 O HOH A 601 2.11 REMARK 500 O HOH D 212 O HOH D 220 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO D 121 CA - CB - CG ANGL. DEV. = -12.1 DEGREES REMARK 500 PRO D 121 CB - CG - CD ANGL. DEV. = -17.2 DEGREES REMARK 500 PRO D 121 N - CD - CG ANGL. DEV. = -9.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 555 -1.66 79.08 REMARK 500 LYS B 565 -164.55 -108.47 REMARK 500 SER C 131 -101.34 -89.04 REMARK 500 SER D 131 -152.11 -122.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 723 DISTANCE = 6.84 ANGSTROMS REMARK 525 HOH B 723 DISTANCE = 5.88 ANGSTROMS REMARK 525 HOH B 724 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH B 725 DISTANCE = 6.27 ANGSTROMS REMARK 525 HOH B 726 DISTANCE = 6.37 ANGSTROMS REMARK 525 HOH B 727 DISTANCE = 6.81 ANGSTROMS REMARK 525 HOH B 728 DISTANCE = 7.30 ANGSTROMS REMARK 525 HOH B 729 DISTANCE = 8.77 ANGSTROMS REMARK 525 HOH C 225 DISTANCE = 6.44 ANGSTROMS DBREF 7TZK A 531 591 UNP Q12929 EPS8_HUMAN 531 591 DBREF 7TZK B 531 591 UNP Q12929 EPS8_HUMAN 531 591 DBREF 7TZK C 121 132 UNP B7ULW4 B7ULW4_ECO27 121 132 DBREF 7TZK D 121 132 UNP B7ULW4 B7ULW4_ECO27 121 132 SEQADV 7TZK SER A -2 UNP Q12929 EXPRESSION TAG SEQADV 7TZK ASN A -1 UNP Q12929 EXPRESSION TAG SEQADV 7TZK ALA A 0 UNP Q12929 EXPRESSION TAG SEQADV 7TZK SER B -2 UNP Q12929 EXPRESSION TAG SEQADV 7TZK ASN B -1 UNP Q12929 EXPRESSION TAG SEQADV 7TZK ALA B 0 UNP Q12929 EXPRESSION TAG SEQRES 1 A 64 SER ASN ALA GLN PRO LYS LYS TYR ALA LYS SER LYS TYR SEQRES 2 A 64 ASP PHE VAL ALA ARG ASN ASN SER GLU LEU SER VAL LEU SEQRES 3 A 64 LYS ASP ASP ILE LEU GLU ILE LEU ASP ASP ARG LYS GLN SEQRES 4 A 64 TRP TRP LYS VAL ARG ASN ALA SER GLY ASP SER GLY PHE SEQRES 5 A 64 VAL PRO ASN ASN ILE LEU ASP ILE VAL ARG PRO PRO SEQRES 1 B 64 SER ASN ALA GLN PRO LYS LYS TYR ALA LYS SER LYS TYR SEQRES 2 B 64 ASP PHE VAL ALA ARG ASN ASN SER GLU LEU SER VAL LEU SEQRES 3 B 64 LYS ASP ASP ILE LEU GLU ILE LEU ASP ASP ARG LYS GLN SEQRES 4 B 64 TRP TRP LYS VAL ARG ASN ALA SER GLY ASP SER GLY PHE SEQRES 5 B 64 VAL PRO ASN ASN ILE LEU ASP ILE VAL ARG PRO PRO SEQRES 1 C 12 PRO PRO GLU LEU PRO SER VAL ASP TYR ASN SER LEU SEQRES 1 D 12 PRO PRO GLU LEU PRO SER VAL ASP TYR ASN SER LEU FORMUL 5 HOH *301(H2 O) SHEET 1 AA1 5 SER A 577 PRO A 581 0 SHEET 2 AA1 5 TRP A 567 ARG A 571 -1 N VAL A 570 O GLY A 578 SHEET 3 AA1 5 ILE A 557 ASP A 562 -1 N GLU A 559 O ARG A 571 SHEET 4 AA1 5 TYR A 535 SER A 538 -1 N ALA A 536 O LEU A 558 SHEET 5 AA1 5 LEU A 585 ILE A 587 -1 O ASP A 586 N LYS A 537 SHEET 1 AA2 5 SER B 577 PRO B 581 0 SHEET 2 AA2 5 TRP B 567 ARG B 571 -1 N VAL B 570 O GLY B 578 SHEET 3 AA2 5 ILE B 557 ASP B 562 -1 N GLU B 559 O ARG B 571 SHEET 4 AA2 5 TYR B 535 SER B 538 -1 N ALA B 536 O LEU B 558 SHEET 5 AA2 5 LEU B 585 VAL B 588 -1 O ASP B 586 N LYS B 537 CRYST1 34.681 35.280 53.647 90.00 105.57 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.028834 0.000000 0.008034 0.00000 SCALE2 0.000000 0.028345 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019350 0.00000