data_7TZR # _entry.id 7TZR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 7TZR pdb_00007tzr 10.2210/pdb7tzr/pdb WWPDB D_1000263219 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 7TZR _pdbx_database_status.recvd_initial_deposition_date 2022-02-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Nuthanakanti, A.' 1 0000-0003-0105-3430 'Serganov, A.' 2 0000-0001-8328-9310 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 119 _citation.language ? _citation.page_first e2122660119 _citation.page_last e2122660119 _citation.title 'SHAPE-enabled fragment-based ligand discovery for RNA.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.2122660119 _citation.pdbx_database_id_PubMed 35561226 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zeller, M.J.' 1 ? primary 'Favorov, O.' 2 0000-0002-8963-8339 primary 'Li, K.' 3 0000-0002-8630-2928 primary 'Nuthanakanti, A.' 4 0000-0003-0105-3430 primary 'Hussein, D.' 5 0000-0003-1658-658X primary 'Michaud, A.' 6 0000-0003-4796-7430 primary 'Lafontaine, D.A.' 7 0000-0001-7891-5700 primary 'Busan, S.' 8 ? primary 'Serganov, A.' 9 ? primary 'Aube, J.' 10 ? primary 'Weeks, K.M.' 11 0000-0002-6748-9985 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 94.321 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 7TZR _cell.details ? _cell.formula_units_Z ? _cell.length_a 150.156 _cell.length_a_esd ? _cell.length_b 29.608 _cell.length_b_esd ? _cell.length_c 95.507 _cell.length_c_esd ? _cell.volume 423399.912 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7TZR _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (80-MER)' 26042.248 2 ? ? ? ? 2 non-polymer syn 'N-methyl-1-(quinoxalin-6-yl)methanamine' 173.214 2 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 5 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 6 water nat water 18.015 34 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(GTP)GACUCGGGGUGCCCUUCUGCGUGAAGGCUGAGAAAUACCCGUAUCACCUGAUCUGGAUAAUGCCAGCGUAGGGAA GUU(CCC) ; _entity_poly.pdbx_seq_one_letter_code_can GGACUCGGGGUGCCCUUCUGCGUGAAGGCUGAGAAAUACCCGUAUCACCUGAUCUGGAUAAUGCCAGCGUAGGGAAGUUC _entity_poly.pdbx_strand_id X,Y _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GTP n 1 2 G n 1 3 A n 1 4 C n 1 5 U n 1 6 C n 1 7 G n 1 8 G n 1 9 G n 1 10 G n 1 11 U n 1 12 G n 1 13 C n 1 14 C n 1 15 C n 1 16 U n 1 17 U n 1 18 C n 1 19 U n 1 20 G n 1 21 C n 1 22 G n 1 23 U n 1 24 G n 1 25 A n 1 26 A n 1 27 G n 1 28 G n 1 29 C n 1 30 U n 1 31 G n 1 32 A n 1 33 G n 1 34 A n 1 35 A n 1 36 A n 1 37 U n 1 38 A n 1 39 C n 1 40 C n 1 41 C n 1 42 G n 1 43 U n 1 44 A n 1 45 U n 1 46 C n 1 47 A n 1 48 C n 1 49 C n 1 50 U n 1 51 G n 1 52 A n 1 53 U n 1 54 C n 1 55 U n 1 56 G n 1 57 G n 1 58 A n 1 59 U n 1 60 A n 1 61 A n 1 62 U n 1 63 G n 1 64 C n 1 65 C n 1 66 A n 1 67 G n 1 68 C n 1 69 G n 1 70 U n 1 71 A n 1 72 G n 1 73 G n 1 74 G n 1 75 A n 1 76 A n 1 77 G n 1 78 U n 1 79 U n 1 80 CCC n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 80 _pdbx_entity_src_syn.organism_scientific 'Escherichia coli' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 562 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 7TZR _struct_ref.pdbx_db_accession 7TZR _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 7TZR X 1 ? 80 ? 7TZR 10 ? 89 ? 10 89 2 1 7TZR Y 1 ? 80 ? 7TZR 10 ? 89 ? 10 89 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CCC 'RNA linking' n ;CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE ; ? 'C9 H13 N3 O10 P2' 385.161 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 KWU non-polymer . 'N-methyl-1-(quinoxalin-6-yl)methanamine' ? 'C10 H11 N3' 173.214 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 7TZR _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.03 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 39.48 _exptl_crystal.description 'shapeless rod cluster' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.8 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;TPP riboswitch RNA (0.2 mM) and 16 (2 mM) were heated in a buffer containing 50 mM potassium acetate (pH 6.8) and 3 (compound 16) mM MgCl2. Reservoir solution containing 0.1 M sodium acetate (pH 4.8), 0.35 M ammonium acetate, and 28% (v/v) PEG4000 ; _exptl_crystal_grow.pdbx_pH_range 4.8-6.8 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2019-03-29 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9252 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSLS-II BEAMLINE 17-ID-2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9252 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 17-ID-2 _diffrn_source.pdbx_synchrotron_site NSLS-II # _reflns.B_iso_Wilson_estimate 42.65 _reflns.entry_id 7TZR _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.70 _reflns.d_resolution_low 30.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11400 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 95.2 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 2.9 _reflns.pdbx_Rmerge_I_obs 0.152 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.101 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.981 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.70 _reflns_shell.d_res_low 2.80 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.3 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1061 _reflns_shell.percent_possible_all 92.3 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.581 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 2.5 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.407 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.656 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 43.91 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 7TZR _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.70 _refine.ls_d_res_low 29.05 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 11382 _refine.ls_number_reflns_R_free 1153 _refine.ls_number_reflns_R_work 10229 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 94.47 _refine.ls_percent_reflns_R_free 10.13 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2095 _refine.ls_R_factor_R_free 0.2609 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2036 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 2GDI _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 26.9874 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.4157 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.70 _refine_hist.d_res_low 29.05 _refine_hist.number_atoms_solvent 34 _refine_hist.number_atoms_total 3462 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 3399 _refine_hist.pdbx_number_atoms_ligand 29 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0032 ? 3826 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.8475 ? 5962 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0390 ? 786 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0057 ? 159 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 18.8432 ? 1931 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.70 2.82 . . 128 1154 87.57 . . . 0.3888 . 0.3235 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.82 2.97 . . 145 1292 95.61 . . . 0.3533 . 0.2796 . . . . . . . . . . . 'X-RAY DIFFRACTION' 2.97 3.15 . . 138 1255 96.53 . . . 0.3431 . 0.2528 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.15 3.40 . . 151 1316 97.15 . . . 0.3018 . 0.2147 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.40 3.74 . . 149 1310 97.07 . . . 0.2581 . 0.2086 . . . . . . . . . . . 'X-RAY DIFFRACTION' 3.74 4.28 . . 150 1302 96.93 . . . 0.2478 . 0.1798 . . . . . . . . . . . 'X-RAY DIFFRACTION' 4.28 5.38 . . 148 1294 94.62 . . . 0.2291 . 0.1713 . . . . . . . . . . . 'X-RAY DIFFRACTION' 5.39 29.05 . . 144 1306 90.51 . . . 0.1886 . 0.1666 . . . . . . . . . . . # _struct.entry_id 7TZR _struct.title 'Crystal structure of the E. coli thiM riboswitch bound to N-methyl-1-(quinoxalin-6-yl)methanamine (compound 16)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 7TZR _struct_keywords.text 'thiM TPP riboswitch, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 2 ? H N N 6 ? I N N 6 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GTP 1 "O3'" ? ? ? 1_555 A G 2 P ? ? X GTP 10 X G 11 1_555 ? ? ? ? ? ? ? 1.602 ? ? covale2 covale both ? A U 79 "O3'" ? ? ? 1_555 A CCC 80 P ? ? X U 88 X CCC 89 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale3 covale both ? B GTP 1 "O3'" ? ? ? 1_555 B G 2 P ? ? Y GTP 10 Y G 11 1_555 ? ? ? ? ? ? ? 1.599 ? ? covale4 covale both ? B U 79 "O3'" ? ? ? 1_555 B CCC 80 P ? ? Y U 88 Y CCC 89 1_555 ? ? ? ? ? ? ? 1.607 ? ? metalc1 metalc ? ? A G 12 "O2'" ? ? ? 1_555 E K . K ? ? X G 21 X K 103 1_555 ? ? ? ? ? ? ? 2.777 ? ? metalc2 metalc ? ? A U 62 "O2'" ? ? ? 1_555 E K . K ? ? X U 71 X K 103 1_555 ? ? ? ? ? ? ? 2.619 ? ? metalc3 metalc ? ? A U 62 O2 ? ? ? 1_555 E K . K ? ? X U 71 X K 103 1_555 ? ? ? ? ? ? ? 3.472 ? ? metalc4 metalc ? ? A G 63 O6 ? ? ? 1_555 D MG . MG ? ? X G 72 X MG 102 1_555 ? ? ? ? ? ? ? 2.977 ? ? metalc5 metalc ? ? A C 64 OP1 ? ? ? 1_555 E K . K ? ? X C 73 X K 103 1_555 ? ? ? ? ? ? ? 2.629 ? ? metalc6 metalc ? ? A G 69 O6 ? ? ? 1_555 D MG . MG ? ? X G 78 X MG 102 1_555 ? ? ? ? ? ? ? 2.931 ? ? metalc7 metalc ? ? D MG . MG ? ? ? 1_555 H HOH . O ? ? X MG 102 X HOH 203 1_555 ? ? ? ? ? ? ? 2.848 ? ? metalc8 metalc ? ? F NA . NA ? ? ? 1_555 H HOH . O ? ? X NA 104 X HOH 217 1_555 ? ? ? ? ? ? ? 2.977 ? ? hydrog1 hydrog ? ? A GTP 1 N1 ? ? ? 1_555 A CCC 80 N3 ? ? X GTP 10 X CCC 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A GTP 1 N2 ? ? ? 1_555 A CCC 80 O2 ? ? X GTP 10 X CCC 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A GTP 1 O6 ? ? ? 1_555 A CCC 80 N4 ? ? X GTP 10 X CCC 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A U 79 O2 ? ? X G 11 X U 88 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog5 hydrog ? ? A G 2 O6 ? ? ? 1_555 A U 79 N3 ? ? X G 11 X U 88 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog6 hydrog ? ? A A 3 N1 ? ? ? 1_555 A U 78 N3 ? ? X A 12 X U 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A A 3 N6 ? ? ? 1_555 A U 78 O4 ? ? X A 12 X U 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 4 N3 ? ? ? 1_555 A G 77 N1 ? ? X C 13 X G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 N4 ? ? ? 1_555 A G 77 O6 ? ? X C 13 X G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 O2 ? ? ? 1_555 A G 77 N2 ? ? X C 13 X G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A U 5 N3 ? ? ? 1_555 A A 76 N1 ? ? X U 14 X A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A U 5 O4 ? ? ? 1_555 A A 76 N6 ? ? X U 14 X A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 6 N3 ? ? ? 1_555 A G 42 N1 ? ? X C 15 X G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 6 N4 ? ? ? 1_555 A G 42 O6 ? ? X C 15 X G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 6 O2 ? ? ? 1_555 A G 42 N2 ? ? X C 15 X G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 7 N1 ? ? ? 1_555 A C 41 N3 ? ? X G 16 X C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 7 N2 ? ? ? 1_555 A C 41 O2 ? ? X G 16 X C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 7 O6 ? ? ? 1_555 A C 41 N4 ? ? X G 16 X C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 7 N2 ? ? ? 1_555 A A 75 N3 ? ? X G 16 X A 84 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog20 hydrog ? ? A G 8 N1 ? ? ? 1_555 A C 40 N3 ? ? X G 17 X C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 40 O2 ? ? X G 17 X C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 8 O6 ? ? ? 1_555 A C 40 N4 ? ? X G 17 X C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A G 8 N2 ? ? ? 1_555 A A 47 N3 ? ? X G 17 X A 56 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog24 hydrog ? ? A G 9 N1 ? ? ? 1_555 A C 39 N3 ? ? X G 18 X C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 9 N2 ? ? ? 1_555 A C 39 O2 ? ? X G 18 X C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 9 O6 ? ? ? 1_555 A C 39 N4 ? ? X G 18 X C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 10 N2 ? ? ? 1_555 A G 33 N3 ? ? X G 19 X G 42 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog28 hydrog ? ? A G 10 N3 ? ? ? 1_555 A G 33 N2 ? ? X G 19 X G 42 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog29 hydrog ? ? A G 10 N1 ? ? ? 1_555 A A 38 N1 ? ? X G 19 X A 47 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog30 hydrog ? ? A G 10 O6 ? ? ? 1_555 A A 38 N6 ? ? X G 19 X A 47 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog31 hydrog ? ? A U 11 N3 ? ? ? 1_555 A A 36 N1 ? ? X U 20 X A 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A U 11 O4 ? ? ? 1_555 A A 36 N6 ? ? X U 20 X A 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 12 N1 ? ? ? 1_555 A C 29 N3 ? ? X G 21 X C 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 12 N2 ? ? ? 1_555 A C 29 O2 ? ? X G 21 X C 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 12 O6 ? ? ? 1_555 A C 29 N4 ? ? X G 21 X C 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 12 N2 ? ? ? 1_555 A U 62 O2 ? ? X G 21 X U 71 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog37 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 28 N1 ? ? X C 22 X G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 28 O6 ? ? X C 22 X G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 28 N2 ? ? X C 22 X G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 14 N3 ? ? ? 1_555 A G 27 N1 ? ? X C 23 X G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 14 N4 ? ? ? 1_555 A G 27 O6 ? ? X C 23 X G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 14 O2 ? ? ? 1_555 A G 27 N2 ? ? X C 23 X G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 15 N4 ? ? ? 1_555 A G 28 N3 ? ? X C 24 X G 37 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog44 hydrog ? ? A U 16 N3 ? ? ? 1_555 A A 26 N1 ? ? X U 25 X A 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A U 16 O4 ? ? ? 1_555 A A 26 N6 ? ? X U 25 X A 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A U 17 N3 ? ? ? 1_555 A A 25 N1 ? ? X U 26 X A 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A U 17 O4 ? ? ? 1_555 A A 25 N6 ? ? X U 26 X A 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A C 18 N3 ? ? ? 1_555 A G 24 N1 ? ? X C 27 X G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A C 18 N4 ? ? ? 1_555 A G 24 O6 ? ? X C 27 X G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A C 18 O2 ? ? ? 1_555 A G 24 N2 ? ? X C 27 X G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A U 19 N3 ? ? ? 1_555 A U 23 O4 ? ? X U 28 X U 32 1_555 ? ? ? ? ? ? TYPE_12_PAIR ? ? ? hydrog52 hydrog ? ? A U 19 O4 ? ? ? 1_555 A U 23 N3 ? ? X U 28 X U 32 1_555 ? ? ? ? ? ? TYPE_12_PAIR ? ? ? hydrog53 hydrog ? ? A G 20 N1 ? ? ? 1_555 B C 21 N3 ? ? X G 29 Y C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? A G 20 N2 ? ? ? 1_555 B C 21 O2 ? ? X G 29 Y C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 20 O6 ? ? ? 1_555 B C 21 N4 ? ? X G 29 Y C 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A C 21 N3 ? ? ? 1_555 B G 20 N1 ? ? X C 30 Y G 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A C 21 N4 ? ? ? 1_555 B G 20 O6 ? ? X C 30 Y G 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A C 21 O2 ? ? ? 1_555 B G 20 N2 ? ? X C 30 Y G 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A G 28 N2 ? ? ? 1_555 A A 60 N1 ? ? X G 37 X A 69 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog60 hydrog ? ? A U 30 N3 ? ? ? 1_555 A A 34 N7 ? ? X U 39 X A 43 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog61 hydrog ? ? A U 30 O2 ? ? ? 1_555 A A 34 N6 ? ? X U 39 X A 43 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog62 hydrog ? ? A A 44 N6 ? ? ? 1_555 A A 75 N7 ? ? X A 53 X A 84 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog63 hydrog ? ? A A 44 N7 ? ? ? 1_555 A A 75 N6 ? ? X A 53 X A 84 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog64 hydrog ? ? A A 47 N6 ? ? ? 1_555 A G 74 N3 ? ? X A 56 X G 83 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog65 hydrog ? ? A A 47 N7 ? ? ? 1_555 A G 74 N2 ? ? X A 56 X G 83 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog66 hydrog ? ? A C 48 N3 ? ? ? 1_555 A G 73 N1 ? ? X C 57 X G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A C 48 N4 ? ? ? 1_555 A G 73 O6 ? ? X C 57 X G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A C 48 O2 ? ? ? 1_555 A G 73 N2 ? ? X C 57 X G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A C 49 N3 ? ? ? 1_555 A G 72 N1 ? ? X C 58 X G 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A C 49 N4 ? ? ? 1_555 A G 72 O6 ? ? X C 58 X G 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A C 49 O2 ? ? ? 1_555 A G 72 N2 ? ? X C 58 X G 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A U 50 N3 ? ? ? 1_555 A A 71 N1 ? ? X U 59 X A 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A U 50 O4 ? ? ? 1_555 A A 71 N6 ? ? X U 59 X A 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A G 51 N1 ? ? ? 1_555 A G 69 O6 ? ? X G 60 X G 78 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog75 hydrog ? ? A G 51 N2 ? ? ? 1_555 A G 69 N7 ? ? X G 60 X G 78 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog76 hydrog ? ? A A 52 N6 ? ? ? 1_555 A C 68 O2 ? ? X A 61 X C 77 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog77 hydrog ? ? A C 54 N3 ? ? ? 1_555 A G 67 N1 ? ? X C 63 X G 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A C 54 N4 ? ? ? 1_555 A G 67 O6 ? ? X C 63 X G 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A C 54 O2 ? ? ? 1_555 A G 67 N2 ? ? X C 63 X G 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A U 55 N3 ? ? ? 1_555 A A 66 N1 ? ? X U 64 X A 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A U 55 O4 ? ? ? 1_555 A A 66 N6 ? ? X U 64 X A 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A G 56 N1 ? ? ? 1_555 A C 65 N3 ? ? X G 65 X C 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A G 56 N2 ? ? ? 1_555 A C 65 O2 ? ? X G 65 X C 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A G 56 O6 ? ? ? 1_555 A C 65 N4 ? ? X G 65 X C 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A G 57 N1 ? ? ? 1_555 A C 64 N3 ? ? X G 66 X C 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A G 57 N2 ? ? ? 1_555 A C 64 O2 ? ? X G 66 X C 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A G 57 O6 ? ? ? 1_555 A C 64 N4 ? ? X G 66 X C 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? B GTP 1 N1 ? ? ? 1_555 B CCC 80 N3 ? ? Y GTP 10 Y CCC 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? B GTP 1 N2 ? ? ? 1_555 B CCC 80 O2 ? ? Y GTP 10 Y CCC 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? B GTP 1 O6 ? ? ? 1_555 B CCC 80 N4 ? ? Y GTP 10 Y CCC 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? B G 2 N1 ? ? ? 1_555 B U 79 O2 ? ? Y G 11 Y U 88 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog92 hydrog ? ? B G 2 O6 ? ? ? 1_555 B U 79 N3 ? ? Y G 11 Y U 88 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog93 hydrog ? ? B A 3 N1 ? ? ? 1_555 B U 78 N3 ? ? Y A 12 Y U 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? B A 3 N6 ? ? ? 1_555 B U 78 O4 ? ? Y A 12 Y U 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 77 N1 ? ? Y C 13 Y G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 77 O6 ? ? Y C 13 Y G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 77 N2 ? ? Y C 13 Y G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? B U 5 N3 ? ? ? 1_555 B A 76 N1 ? ? Y U 14 Y A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? B U 5 O4 ? ? ? 1_555 B A 76 N6 ? ? Y U 14 Y A 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? B C 6 N3 ? ? ? 1_555 B G 42 N1 ? ? Y C 15 Y G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? B C 6 N4 ? ? ? 1_555 B G 42 O6 ? ? Y C 15 Y G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? B C 6 O2 ? ? ? 1_555 B G 42 N2 ? ? Y C 15 Y G 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? B G 7 N1 ? ? ? 1_555 B C 41 N3 ? ? Y G 16 Y C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? B G 7 N2 ? ? ? 1_555 B C 41 O2 ? ? Y G 16 Y C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? B G 7 O6 ? ? ? 1_555 B C 41 N4 ? ? Y G 16 Y C 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? B G 7 N2 ? ? ? 1_555 B A 75 N3 ? ? Y G 16 Y A 84 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog107 hydrog ? ? B G 8 N1 ? ? ? 1_555 B C 40 N3 ? ? Y G 17 Y C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? B G 8 N2 ? ? ? 1_555 B C 40 O2 ? ? Y G 17 Y C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? B G 8 O6 ? ? ? 1_555 B C 40 N4 ? ? Y G 17 Y C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? B G 8 N2 ? ? ? 1_555 B A 47 N3 ? ? Y G 17 Y A 56 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog111 hydrog ? ? B G 9 N1 ? ? ? 1_555 B C 39 N3 ? ? Y G 18 Y C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? B G 9 N2 ? ? ? 1_555 B C 39 O2 ? ? Y G 18 Y C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? B G 9 O6 ? ? ? 1_555 B C 39 N4 ? ? Y G 18 Y C 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? B G 10 N2 ? ? ? 1_555 B G 33 N3 ? ? Y G 19 Y G 42 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog115 hydrog ? ? B G 10 N3 ? ? ? 1_555 B G 33 N2 ? ? Y G 19 Y G 42 1_555 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog116 hydrog ? ? B G 10 N1 ? ? ? 1_555 B A 38 N1 ? ? Y G 19 Y A 47 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog117 hydrog ? ? B G 10 O6 ? ? ? 1_555 B A 38 N6 ? ? Y G 19 Y A 47 1_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? ? hydrog118 hydrog ? ? B U 11 N3 ? ? ? 1_555 B A 36 N1 ? ? Y U 20 Y A 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? B U 11 O4 ? ? ? 1_555 B A 36 N6 ? ? Y U 20 Y A 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog120 hydrog ? ? B G 12 N1 ? ? ? 1_555 B C 29 N3 ? ? Y G 21 Y C 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? B G 12 N2 ? ? ? 1_555 B C 29 O2 ? ? Y G 21 Y C 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? B G 12 O6 ? ? ? 1_555 B C 29 N4 ? ? Y G 21 Y C 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? B G 12 N2 ? ? ? 1_555 B U 62 O2 ? ? Y G 21 Y U 71 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog124 hydrog ? ? B C 13 N3 ? ? ? 1_555 B G 28 N1 ? ? Y C 22 Y G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? B C 13 N4 ? ? ? 1_555 B G 28 O6 ? ? Y C 22 Y G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? B C 13 O2 ? ? ? 1_555 B G 28 N2 ? ? Y C 22 Y G 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? B C 14 N3 ? ? ? 1_555 B G 27 N1 ? ? Y C 23 Y G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? B C 14 N4 ? ? ? 1_555 B G 27 O6 ? ? Y C 23 Y G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? B C 14 O2 ? ? ? 1_555 B G 27 N2 ? ? Y C 23 Y G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? B C 15 N4 ? ? ? 1_555 B G 28 N3 ? ? Y C 24 Y G 37 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog131 hydrog ? ? B U 16 N3 ? ? ? 1_555 B A 26 N1 ? ? Y U 25 Y A 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? B U 16 O4 ? ? ? 1_555 B A 26 N6 ? ? Y U 25 Y A 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? B U 17 N3 ? ? ? 1_555 B A 25 N1 ? ? Y U 26 Y A 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? B U 17 O4 ? ? ? 1_555 B A 25 N6 ? ? Y U 26 Y A 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? B C 18 N3 ? ? ? 1_555 B G 24 N1 ? ? Y C 27 Y G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog136 hydrog ? ? B C 18 N4 ? ? ? 1_555 B G 24 O6 ? ? Y C 27 Y G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? B C 18 O2 ? ? ? 1_555 B G 24 N2 ? ? Y C 27 Y G 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? B U 19 N3 ? ? ? 1_555 B U 23 O4 ? ? Y U 28 Y U 32 1_555 ? ? ? ? ? ? TYPE_12_PAIR ? ? ? hydrog139 hydrog ? ? B U 19 O4 ? ? ? 1_555 B U 23 N3 ? ? Y U 28 Y U 32 1_555 ? ? ? ? ? ? TYPE_12_PAIR ? ? ? hydrog140 hydrog ? ? B U 19 N3 ? ? ? 1_555 B G 24 O6 ? ? Y U 28 Y G 33 1_555 ? ? ? ? ? ? TYPE_27_PAIR ? ? ? hydrog141 hydrog ? ? B U 19 O4 ? ? ? 1_555 B G 24 N1 ? ? Y U 28 Y G 33 1_555 ? ? ? ? ? ? TYPE_27_PAIR ? ? ? hydrog142 hydrog ? ? B G 28 N2 ? ? ? 1_555 B A 60 N1 ? ? Y G 37 Y A 69 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog143 hydrog ? ? B U 30 N3 ? ? ? 1_555 B A 34 N7 ? ? Y U 39 Y A 43 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog144 hydrog ? ? B U 30 O2 ? ? ? 1_555 B A 34 N6 ? ? Y U 39 Y A 43 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog145 hydrog ? ? B A 44 N6 ? ? ? 1_555 B A 75 N7 ? ? Y A 53 Y A 84 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog146 hydrog ? ? B A 44 N7 ? ? ? 1_555 B A 75 N6 ? ? Y A 53 Y A 84 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog147 hydrog ? ? B A 47 N6 ? ? ? 1_555 B G 74 N3 ? ? Y A 56 Y G 83 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog148 hydrog ? ? B A 47 N7 ? ? ? 1_555 B G 74 N2 ? ? Y A 56 Y G 83 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog149 hydrog ? ? B C 48 N3 ? ? ? 1_555 B G 73 N1 ? ? Y C 57 Y G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog150 hydrog ? ? B C 48 N4 ? ? ? 1_555 B G 73 O6 ? ? Y C 57 Y G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog151 hydrog ? ? B C 48 O2 ? ? ? 1_555 B G 73 N2 ? ? Y C 57 Y G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog152 hydrog ? ? B C 49 N3 ? ? ? 1_555 B G 72 N1 ? ? Y C 58 Y G 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog153 hydrog ? ? B C 49 N4 ? ? ? 1_555 B G 72 O6 ? ? Y C 58 Y G 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog154 hydrog ? ? B C 49 O2 ? ? ? 1_555 B G 72 N2 ? ? Y C 58 Y G 81 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog155 hydrog ? ? B U 50 N3 ? ? ? 1_555 B A 71 N1 ? ? Y U 59 Y A 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog156 hydrog ? ? B U 50 O4 ? ? ? 1_555 B A 71 N6 ? ? Y U 59 Y A 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog157 hydrog ? ? B G 51 N1 ? ? ? 1_555 B G 69 O6 ? ? Y G 60 Y G 78 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog158 hydrog ? ? B G 51 N2 ? ? ? 1_555 B G 69 N7 ? ? Y G 60 Y G 78 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog159 hydrog ? ? B A 52 N6 ? ? ? 1_555 B C 68 O2 ? ? Y A 61 Y C 77 1_555 ? ? ? ? ? ? 'A-C MISPAIR' ? ? ? hydrog160 hydrog ? ? B C 54 N3 ? ? ? 1_555 B G 67 N1 ? ? Y C 63 Y G 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog161 hydrog ? ? B C 54 N4 ? ? ? 1_555 B G 67 O6 ? ? Y C 63 Y G 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog162 hydrog ? ? B C 54 O2 ? ? ? 1_555 B G 67 N2 ? ? Y C 63 Y G 76 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog163 hydrog ? ? B U 55 N3 ? ? ? 1_555 B A 66 N1 ? ? Y U 64 Y A 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog164 hydrog ? ? B U 55 O4 ? ? ? 1_555 B A 66 N6 ? ? Y U 64 Y A 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog165 hydrog ? ? B G 56 N1 ? ? ? 1_555 B C 65 N3 ? ? Y G 65 Y C 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog166 hydrog ? ? B G 56 N2 ? ? ? 1_555 B C 65 O2 ? ? Y G 65 Y C 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog167 hydrog ? ? B G 56 O6 ? ? ? 1_555 B C 65 N4 ? ? Y G 65 Y C 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog168 hydrog ? ? B G 57 N1 ? ? ? 1_555 B C 64 N3 ? ? Y G 66 Y C 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog169 hydrog ? ? B G 57 N2 ? ? ? 1_555 B C 64 O2 ? ? Y G 66 Y C 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog170 hydrog ? ? B G 57 O6 ? ? ? 1_555 B C 64 N4 ? ? Y G 66 Y C 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _atom_sites.entry_id 7TZR _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.006660 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000503 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.033775 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010500 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? H ? ? 0.51345 0.48472 ? ? 24.73122 6.32584 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? K ? ? 16.37977 2.54835 ? ? 4.54127 84.28225 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? MG ? ? 9.41153 2.53737 ? ? 2.59044 63.03566 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? NA ? ? 9.38062 1.54875 ? ? 3.38349 72.32734 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 7.96527 ? ? ? 9.05267 ? ? ? 0.0 ;1-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GTP 1 10 10 GTP GTP X . n A 1 2 G 2 11 11 G G X . n A 1 3 A 3 12 12 A A X . n A 1 4 C 4 13 13 C C X . n A 1 5 U 5 14 14 U U X . n A 1 6 C 6 15 15 C C X . n A 1 7 G 7 16 16 G G X . n A 1 8 G 8 17 17 G G X . n A 1 9 G 9 18 18 G G X . n A 1 10 G 10 19 19 G G X . n A 1 11 U 11 20 20 U U X . n A 1 12 G 12 21 21 G G X . n A 1 13 C 13 22 22 C C X . n A 1 14 C 14 23 23 C C X . n A 1 15 C 15 24 24 C C X . n A 1 16 U 16 25 25 U U X . n A 1 17 U 17 26 26 U U X . n A 1 18 C 18 27 27 C C X . n A 1 19 U 19 28 28 U U X . n A 1 20 G 20 29 29 G G X . n A 1 21 C 21 30 30 C C X . n A 1 22 G 22 31 31 G G X . n A 1 23 U 23 32 32 U U X . n A 1 24 G 24 33 33 G G X . n A 1 25 A 25 34 34 A A X . n A 1 26 A 26 35 35 A A X . n A 1 27 G 27 36 36 G G X . n A 1 28 G 28 37 37 G G X . n A 1 29 C 29 38 38 C C X . n A 1 30 U 30 39 39 U U X . n A 1 31 G 31 40 40 G G X . n A 1 32 A 32 41 41 A A X . n A 1 33 G 33 42 42 G G X . n A 1 34 A 34 43 43 A A X . n A 1 35 A 35 44 44 A A X . n A 1 36 A 36 45 45 A A X . n A 1 37 U 37 46 46 U U X . n A 1 38 A 38 47 47 A A X . n A 1 39 C 39 48 48 C C X . n A 1 40 C 40 49 49 C C X . n A 1 41 C 41 50 50 C C X . n A 1 42 G 42 51 51 G G X . n A 1 43 U 43 52 52 U U X . n A 1 44 A 44 53 53 A A X . n A 1 45 U 45 54 54 U U X . n A 1 46 C 46 55 55 C C X . n A 1 47 A 47 56 56 A A X . n A 1 48 C 48 57 57 C C X . n A 1 49 C 49 58 58 C C X . n A 1 50 U 50 59 59 U U X . n A 1 51 G 51 60 60 G G X . n A 1 52 A 52 61 61 A A X . n A 1 53 U 53 62 62 U U X . n A 1 54 C 54 63 63 C C X . n A 1 55 U 55 64 64 U U X . n A 1 56 G 56 65 65 G G X . n A 1 57 G 57 66 66 G G X . n A 1 58 A 58 67 67 A A X . n A 1 59 U 59 68 68 U U X . n A 1 60 A 60 69 69 A A X . n A 1 61 A 61 70 70 A A X . n A 1 62 U 62 71 71 U U X . n A 1 63 G 63 72 72 G G X . n A 1 64 C 64 73 73 C C X . n A 1 65 C 65 74 74 C C X . n A 1 66 A 66 75 75 A A X . n A 1 67 G 67 76 76 G G X . n A 1 68 C 68 77 77 C C X . n A 1 69 G 69 78 78 G G X . n A 1 70 U 70 79 79 U U X . n A 1 71 A 71 80 80 A A X . n A 1 72 G 72 81 81 G G X . n A 1 73 G 73 82 82 G G X . n A 1 74 G 74 83 83 G G X . n A 1 75 A 75 84 84 A A X . n A 1 76 A 76 85 85 A A X . n A 1 77 G 77 86 86 G G X . n A 1 78 U 78 87 87 U U X . n A 1 79 U 79 88 88 U U X . n A 1 80 CCC 80 89 89 CCC CCC X . n B 1 1 GTP 1 10 10 GTP GTP Y . n B 1 2 G 2 11 11 G G Y . n B 1 3 A 3 12 12 A A Y . n B 1 4 C 4 13 13 C C Y . n B 1 5 U 5 14 14 U U Y . n B 1 6 C 6 15 15 C C Y . n B 1 7 G 7 16 16 G G Y . n B 1 8 G 8 17 17 G G Y . n B 1 9 G 9 18 18 G G Y . n B 1 10 G 10 19 19 G G Y . n B 1 11 U 11 20 20 U U Y . n B 1 12 G 12 21 21 G G Y . n B 1 13 C 13 22 22 C C Y . n B 1 14 C 14 23 23 C C Y . n B 1 15 C 15 24 24 C C Y . n B 1 16 U 16 25 25 U U Y . n B 1 17 U 17 26 26 U U Y . n B 1 18 C 18 27 27 C C Y . n B 1 19 U 19 28 28 U U Y . n B 1 20 G 20 29 29 G G Y . n B 1 21 C 21 30 30 C C Y . n B 1 22 G 22 31 31 G G Y . n B 1 23 U 23 32 32 U U Y . n B 1 24 G 24 33 33 G G Y . n B 1 25 A 25 34 34 A A Y . n B 1 26 A 26 35 35 A A Y . n B 1 27 G 27 36 36 G G Y . n B 1 28 G 28 37 37 G G Y . n B 1 29 C 29 38 38 C C Y . n B 1 30 U 30 39 39 U U Y . n B 1 31 G 31 40 40 G G Y . n B 1 32 A 32 41 41 A A Y . n B 1 33 G 33 42 42 G G Y . n B 1 34 A 34 43 43 A A Y . n B 1 35 A 35 44 44 A A Y . n B 1 36 A 36 45 45 A A Y . n B 1 37 U 37 46 46 U U Y . n B 1 38 A 38 47 47 A A Y . n B 1 39 C 39 48 48 C C Y . n B 1 40 C 40 49 49 C C Y . n B 1 41 C 41 50 50 C C Y . n B 1 42 G 42 51 51 G G Y . n B 1 43 U 43 52 52 U U Y . n B 1 44 A 44 53 53 A A Y . n B 1 45 U 45 54 54 U U Y . n B 1 46 C 46 55 55 C C Y . n B 1 47 A 47 56 56 A A Y . n B 1 48 C 48 57 57 C C Y . n B 1 49 C 49 58 58 C C Y . n B 1 50 U 50 59 59 U U Y . n B 1 51 G 51 60 60 G G Y . n B 1 52 A 52 61 61 A A Y . n B 1 53 U 53 62 62 U U Y . n B 1 54 C 54 63 63 C C Y . n B 1 55 U 55 64 64 U U Y . n B 1 56 G 56 65 65 G G Y . n B 1 57 G 57 66 66 G G Y . n B 1 58 A 58 67 67 A A Y . n B 1 59 U 59 68 68 U U Y . n B 1 60 A 60 69 69 A A Y . n B 1 61 A 61 70 70 A A Y . n B 1 62 U 62 71 71 U U Y . n B 1 63 G 63 72 72 G G Y . n B 1 64 C 64 73 73 C C Y . n B 1 65 C 65 74 74 C C Y . n B 1 66 A 66 75 75 A A Y . n B 1 67 G 67 76 76 G G Y . n B 1 68 C 68 77 77 C C Y . n B 1 69 G 69 78 78 G G Y . n B 1 70 U 70 79 79 U U Y . n B 1 71 A 71 80 80 A A Y . n B 1 72 G 72 81 81 G G Y . n B 1 73 G 73 82 82 G G Y . n B 1 74 G 74 83 83 G G Y . n B 1 75 A 75 84 84 A A Y . n B 1 76 A 76 85 85 A A Y . n B 1 77 G 77 86 86 G G Y . n B 1 78 U 78 87 87 U U Y . n B 1 79 U 79 88 88 U U Y . n B 1 80 CCC 80 89 89 CCC CCC Y . n # _pdbx_contact_author.id 2 _pdbx_contact_author.email Alexander.Serganov@nyulangone.org _pdbx_contact_author.name_first Alexander _pdbx_contact_author.name_last Serganov _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-8328-9310 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 KWU 1 101 101 KWU KWU X . D 3 MG 1 102 102 MG MG X . E 4 K 1 103 103 K K X . F 5 NA 1 104 104 NA NA X . G 2 KWU 1 101 101 KWU KWU Y . H 6 HOH 1 201 201 HOH HOH X . H 6 HOH 2 202 202 HOH HOH X . H 6 HOH 3 203 203 HOH HOH X . H 6 HOH 4 204 204 HOH HOH X . H 6 HOH 5 205 205 HOH HOH X . H 6 HOH 6 206 206 HOH HOH X . H 6 HOH 7 207 207 HOH HOH X . H 6 HOH 8 208 208 HOH HOH X . H 6 HOH 9 209 209 HOH HOH X . H 6 HOH 10 210 210 HOH HOH X . H 6 HOH 11 211 211 HOH HOH X . H 6 HOH 12 212 212 HOH HOH X . H 6 HOH 13 213 213 HOH HOH X . H 6 HOH 14 214 214 HOH HOH X . H 6 HOH 15 215 215 HOH HOH X . H 6 HOH 16 216 216 HOH HOH X . H 6 HOH 17 217 217 HOH HOH X . H 6 HOH 18 218 218 HOH HOH X . H 6 HOH 19 219 219 HOH HOH X . H 6 HOH 20 220 220 HOH HOH X . H 6 HOH 21 221 221 HOH HOH X . H 6 HOH 22 222 222 HOH HOH X . H 6 HOH 23 223 223 HOH HOH X . H 6 HOH 24 224 224 HOH HOH X . H 6 HOH 25 225 225 HOH HOH X . H 6 HOH 26 226 226 HOH HOH X . H 6 HOH 27 227 227 HOH HOH X . H 6 HOH 28 228 228 HOH HOH X . I 6 HOH 1 201 201 HOH HOH Y . I 6 HOH 2 202 202 HOH HOH Y . I 6 HOH 3 203 203 HOH HOH Y . I 6 HOH 4 204 204 HOH HOH Y . I 6 HOH 5 205 205 HOH HOH Y . I 6 HOH 6 206 206 HOH HOH Y . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 "O2'" ? A G 12 ? X G 21 ? 1_555 K ? E K . ? X K 103 ? 1_555 "O2'" ? A U 62 ? X U 71 ? 1_555 75.2 ? 2 "O2'" ? A G 12 ? X G 21 ? 1_555 K ? E K . ? X K 103 ? 1_555 O2 ? A U 62 ? X U 71 ? 1_555 124.8 ? 3 "O2'" ? A U 62 ? X U 71 ? 1_555 K ? E K . ? X K 103 ? 1_555 O2 ? A U 62 ? X U 71 ? 1_555 76.6 ? 4 "O2'" ? A G 12 ? X G 21 ? 1_555 K ? E K . ? X K 103 ? 1_555 OP1 ? A C 64 ? X C 73 ? 1_555 133.2 ? 5 "O2'" ? A U 62 ? X U 71 ? 1_555 K ? E K . ? X K 103 ? 1_555 OP1 ? A C 64 ? X C 73 ? 1_555 135.6 ? 6 O2 ? A U 62 ? X U 71 ? 1_555 K ? E K . ? X K 103 ? 1_555 OP1 ? A C 64 ? X C 73 ? 1_555 99.6 ? 7 O6 ? A G 63 ? X G 72 ? 1_555 MG ? D MG . ? X MG 102 ? 1_555 O6 ? A G 69 ? X G 78 ? 1_555 88.5 ? 8 O6 ? A G 63 ? X G 72 ? 1_555 MG ? D MG . ? X MG 102 ? 1_555 O ? H HOH . ? X HOH 203 ? 1_555 63.5 ? 9 O6 ? A G 69 ? X G 78 ? 1_555 MG ? D MG . ? X MG 102 ? 1_555 O ? H HOH . ? X HOH 203 ? 1_555 133.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-05-25 2 'Structure model' 1 1 2023-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' pdbx_initial_refinement_model # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 -x,y,-z 3 x+1/2,y+1/2,z 4 -x+1/2,y+1/2,-z # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.14-3260 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 5 # _pdbx_entry_details.entry_id 7TZR _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 X U 46 ? "O4'" ? A U 37 "O4'" 2 1 Y 1 X U 46 ? "C2'" ? A U 37 "C2'" 3 1 Y 1 X U 46 ? "O2'" ? A U 37 "O2'" 4 1 Y 1 X U 46 ? "C1'" ? A U 37 "C1'" 5 1 Y 1 X U 46 ? N1 ? A U 37 N1 6 1 Y 1 X U 46 ? C2 ? A U 37 C2 7 1 Y 1 X U 46 ? O2 ? A U 37 O2 8 1 Y 1 X U 46 ? N3 ? A U 37 N3 9 1 Y 1 X U 46 ? C4 ? A U 37 C4 10 1 Y 1 X U 46 ? O4 ? A U 37 O4 11 1 Y 1 X U 46 ? C5 ? A U 37 C5 12 1 Y 1 X U 46 ? C6 ? A U 37 C6 13 1 Y 1 X C 55 ? N1 ? A C 46 N1 14 1 Y 1 X C 55 ? C2 ? A C 46 C2 15 1 Y 1 X C 55 ? O2 ? A C 46 O2 16 1 Y 1 X C 55 ? N3 ? A C 46 N3 17 1 Y 1 X C 55 ? C4 ? A C 46 C4 18 1 Y 1 X C 55 ? N4 ? A C 46 N4 19 1 Y 1 X C 55 ? C5 ? A C 46 C5 20 1 Y 1 X C 55 ? C6 ? A C 46 C6 21 1 Y 1 Y U 46 ? C2 ? B U 37 C2 22 1 Y 1 Y U 46 ? O2 ? B U 37 O2 23 1 Y 1 Y U 46 ? N3 ? B U 37 N3 24 1 Y 1 Y U 46 ? C4 ? B U 37 C4 25 1 Y 1 Y U 46 ? O4 ? B U 37 O4 26 1 Y 1 Y U 46 ? C5 ? B U 37 C5 27 1 Y 1 Y U 46 ? C6 ? B U 37 C6 28 1 Y 1 Y U 54 ? "O4'" ? B U 45 "O4'" 29 1 Y 1 Y U 54 ? "C2'" ? B U 45 "C2'" 30 1 Y 1 Y U 54 ? "O2'" ? B U 45 "O2'" 31 1 Y 1 Y U 54 ? "C1'" ? B U 45 "C1'" 32 1 Y 1 Y U 54 ? N1 ? B U 45 N1 33 1 Y 1 Y U 54 ? C2 ? B U 45 C2 34 1 Y 1 Y U 54 ? O2 ? B U 45 O2 35 1 Y 1 Y U 54 ? N3 ? B U 45 N3 36 1 Y 1 Y U 54 ? C4 ? B U 45 C4 37 1 Y 1 Y U 54 ? O4 ? B U 45 O4 38 1 Y 1 Y U 54 ? C5 ? B U 45 C5 39 1 Y 1 Y U 54 ? C6 ? B U 45 C6 40 1 Y 1 Y C 55 ? N1 ? B C 46 N1 41 1 Y 1 Y C 55 ? C2 ? B C 46 C2 42 1 Y 1 Y C 55 ? O2 ? B C 46 O2 43 1 Y 1 Y C 55 ? N3 ? B C 46 N3 44 1 Y 1 Y C 55 ? C4 ? B C 46 C4 45 1 Y 1 Y C 55 ? N4 ? B C 46 N4 46 1 Y 1 Y C 55 ? C5 ? B C 46 C5 47 1 Y 1 Y C 55 ? C6 ? B C 46 C6 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 CCC PC P N S 73 CCC O1C O N N 74 CCC O2C O N N 75 CCC P P N N 76 CCC OP1 O N N 77 CCC OP2 O N N 78 CCC OP3 O N N 79 CCC "O5'" O N N 80 CCC "C5'" C N N 81 CCC "C4'" C N R 82 CCC "O4'" O N N 83 CCC "C3'" C N R 84 CCC "O3'" O N N 85 CCC "C2'" C N R 86 CCC "O2'" O N N 87 CCC "C1'" C N R 88 CCC N1 N N N 89 CCC C2 C N N 90 CCC O2 O N N 91 CCC N3 N N N 92 CCC C4 C N N 93 CCC N4 N N N 94 CCC C5 C N N 95 CCC C6 C N N 96 CCC HOC2 H N N 97 CCC HOP2 H N N 98 CCC HOP3 H N N 99 CCC "H5'" H N N 100 CCC "H5''" H N N 101 CCC "H4'" H N N 102 CCC "H3'" H N N 103 CCC "H2'" H N N 104 CCC "H1'" H N N 105 CCC H41 H N N 106 CCC H42 H N N 107 CCC H5 H N N 108 CCC H6 H N N 109 G OP3 O N N 110 G P P N N 111 G OP1 O N N 112 G OP2 O N N 113 G "O5'" O N N 114 G "C5'" C N N 115 G "C4'" C N R 116 G "O4'" O N N 117 G "C3'" C N S 118 G "O3'" O N N 119 G "C2'" C N R 120 G "O2'" O N N 121 G "C1'" C N R 122 G N9 N Y N 123 G C8 C Y N 124 G N7 N Y N 125 G C5 C Y N 126 G C6 C N N 127 G O6 O N N 128 G N1 N N N 129 G C2 C N N 130 G N2 N N N 131 G N3 N N N 132 G C4 C Y N 133 G HOP3 H N N 134 G HOP2 H N N 135 G "H5'" H N N 136 G "H5''" H N N 137 G "H4'" H N N 138 G "H3'" H N N 139 G "HO3'" H N N 140 G "H2'" H N N 141 G "HO2'" H N N 142 G "H1'" H N N 143 G H8 H N N 144 G H1 H N N 145 G H21 H N N 146 G H22 H N N 147 GTP PG P N N 148 GTP O1G O N N 149 GTP O2G O N N 150 GTP O3G O N N 151 GTP O3B O N N 152 GTP PB P N N 153 GTP O1B O N N 154 GTP O2B O N N 155 GTP O3A O N N 156 GTP PA P N N 157 GTP O1A O N N 158 GTP O2A O N N 159 GTP "O5'" O N N 160 GTP "C5'" C N N 161 GTP "C4'" C N R 162 GTP "O4'" O N N 163 GTP "C3'" C N S 164 GTP "O3'" O N N 165 GTP "C2'" C N R 166 GTP "O2'" O N N 167 GTP "C1'" C N R 168 GTP N9 N Y N 169 GTP C8 C Y N 170 GTP N7 N Y N 171 GTP C5 C Y N 172 GTP C6 C N N 173 GTP O6 O N N 174 GTP N1 N N N 175 GTP C2 C N N 176 GTP N2 N N N 177 GTP N3 N N N 178 GTP C4 C Y N 179 GTP HOG2 H N N 180 GTP HOG3 H N N 181 GTP HOB2 H N N 182 GTP HOA2 H N N 183 GTP "H5'" H N N 184 GTP "H5''" H N N 185 GTP "H4'" H N N 186 GTP "H3'" H N N 187 GTP "HO3'" H N N 188 GTP "H2'" H N N 189 GTP "HO2'" H N N 190 GTP "H1'" H N N 191 GTP H8 H N N 192 GTP HN1 H N N 193 GTP HN21 H N N 194 GTP HN22 H N N 195 HOH O O N N 196 HOH H1 H N N 197 HOH H2 H N N 198 K K K N N 199 KWU N1 N Y N 200 KWU C5 C Y N 201 KWU C6 C Y N 202 KWU C7 C Y N 203 KWU C8 C Y N 204 KWU C10 C Y N 205 KWU C12 C N N 206 KWU C11 C N N 207 KWU C9 C Y N 208 KWU C3 C Y N 209 KWU C2 C Y N 210 KWU N12 N N N 211 KWU N4 N Y N 212 KWU H5 H N N 213 KWU H6 H N N 214 KWU H8 H N N 215 KWU H122 H N N 216 KWU H123 H N N 217 KWU H120 H N N 218 KWU H111 H N N 219 KWU H112 H N N 220 KWU H3 H N N 221 KWU H2 H N N 222 KWU H121 H N N 223 MG MG MG N N 224 NA NA NA N N 225 U OP3 O N N 226 U P P N N 227 U OP1 O N N 228 U OP2 O N N 229 U "O5'" O N N 230 U "C5'" C N N 231 U "C4'" C N R 232 U "O4'" O N N 233 U "C3'" C N S 234 U "O3'" O N N 235 U "C2'" C N R 236 U "O2'" O N N 237 U "C1'" C N R 238 U N1 N N N 239 U C2 C N N 240 U O2 O N N 241 U N3 N N N 242 U C4 C N N 243 U O4 O N N 244 U C5 C N N 245 U C6 C N N 246 U HOP3 H N N 247 U HOP2 H N N 248 U "H5'" H N N 249 U "H5''" H N N 250 U "H4'" H N N 251 U "H3'" H N N 252 U "HO3'" H N N 253 U "H2'" H N N 254 U "HO2'" H N N 255 U "H1'" H N N 256 U H3 H N N 257 U H5 H N N 258 U H6 H N N 259 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 CCC PC O1C doub N N 76 CCC PC O2C sing N N 77 CCC PC "O3'" sing N N 78 CCC PC "O2'" sing N N 79 CCC O2C HOC2 sing N N 80 CCC P OP1 doub N N 81 CCC P OP2 sing N N 82 CCC P OP3 sing N N 83 CCC P "O5'" sing N N 84 CCC OP2 HOP2 sing N N 85 CCC OP3 HOP3 sing N N 86 CCC "O5'" "C5'" sing N N 87 CCC "C5'" "C4'" sing N N 88 CCC "C5'" "H5'" sing N N 89 CCC "C5'" "H5''" sing N N 90 CCC "C4'" "O4'" sing N N 91 CCC "C4'" "C3'" sing N N 92 CCC "C4'" "H4'" sing N N 93 CCC "O4'" "C1'" sing N N 94 CCC "C3'" "O3'" sing N N 95 CCC "C3'" "C2'" sing N N 96 CCC "C3'" "H3'" sing N N 97 CCC "C2'" "O2'" sing N N 98 CCC "C2'" "C1'" sing N N 99 CCC "C2'" "H2'" sing N N 100 CCC "C1'" N1 sing N N 101 CCC "C1'" "H1'" sing N N 102 CCC N1 C2 sing N N 103 CCC N1 C6 sing N N 104 CCC C2 O2 doub N N 105 CCC C2 N3 sing N N 106 CCC N3 C4 doub N N 107 CCC C4 N4 sing N N 108 CCC C4 C5 sing N N 109 CCC N4 H41 sing N N 110 CCC N4 H42 sing N N 111 CCC C5 C6 doub N N 112 CCC C5 H5 sing N N 113 CCC C6 H6 sing N N 114 G OP3 P sing N N 115 G OP3 HOP3 sing N N 116 G P OP1 doub N N 117 G P OP2 sing N N 118 G P "O5'" sing N N 119 G OP2 HOP2 sing N N 120 G "O5'" "C5'" sing N N 121 G "C5'" "C4'" sing N N 122 G "C5'" "H5'" sing N N 123 G "C5'" "H5''" sing N N 124 G "C4'" "O4'" sing N N 125 G "C4'" "C3'" sing N N 126 G "C4'" "H4'" sing N N 127 G "O4'" "C1'" sing N N 128 G "C3'" "O3'" sing N N 129 G "C3'" "C2'" sing N N 130 G "C3'" "H3'" sing N N 131 G "O3'" "HO3'" sing N N 132 G "C2'" "O2'" sing N N 133 G "C2'" "C1'" sing N N 134 G "C2'" "H2'" sing N N 135 G "O2'" "HO2'" sing N N 136 G "C1'" N9 sing N N 137 G "C1'" "H1'" sing N N 138 G N9 C8 sing Y N 139 G N9 C4 sing Y N 140 G C8 N7 doub Y N 141 G C8 H8 sing N N 142 G N7 C5 sing Y N 143 G C5 C6 sing N N 144 G C5 C4 doub Y N 145 G C6 O6 doub N N 146 G C6 N1 sing N N 147 G N1 C2 sing N N 148 G N1 H1 sing N N 149 G C2 N2 sing N N 150 G C2 N3 doub N N 151 G N2 H21 sing N N 152 G N2 H22 sing N N 153 G N3 C4 sing N N 154 GTP PG O1G doub N N 155 GTP PG O2G sing N N 156 GTP PG O3G sing N N 157 GTP PG O3B sing N N 158 GTP O2G HOG2 sing N N 159 GTP O3G HOG3 sing N N 160 GTP O3B PB sing N N 161 GTP PB O1B doub N N 162 GTP PB O2B sing N N 163 GTP PB O3A sing N N 164 GTP O2B HOB2 sing N N 165 GTP O3A PA sing N N 166 GTP PA O1A doub N N 167 GTP PA O2A sing N N 168 GTP PA "O5'" sing N N 169 GTP O2A HOA2 sing N N 170 GTP "O5'" "C5'" sing N N 171 GTP "C5'" "C4'" sing N N 172 GTP "C5'" "H5'" sing N N 173 GTP "C5'" "H5''" sing N N 174 GTP "C4'" "O4'" sing N N 175 GTP "C4'" "C3'" sing N N 176 GTP "C4'" "H4'" sing N N 177 GTP "O4'" "C1'" sing N N 178 GTP "C3'" "O3'" sing N N 179 GTP "C3'" "C2'" sing N N 180 GTP "C3'" "H3'" sing N N 181 GTP "O3'" "HO3'" sing N N 182 GTP "C2'" "O2'" sing N N 183 GTP "C2'" "C1'" sing N N 184 GTP "C2'" "H2'" sing N N 185 GTP "O2'" "HO2'" sing N N 186 GTP "C1'" N9 sing N N 187 GTP "C1'" "H1'" sing N N 188 GTP N9 C8 sing Y N 189 GTP N9 C4 sing Y N 190 GTP C8 N7 doub Y N 191 GTP C8 H8 sing N N 192 GTP N7 C5 sing Y N 193 GTP C5 C6 sing N N 194 GTP C5 C4 doub Y N 195 GTP C6 O6 doub N N 196 GTP C6 N1 sing N N 197 GTP N1 C2 sing N N 198 GTP N1 HN1 sing N N 199 GTP C2 N2 sing N N 200 GTP C2 N3 doub N N 201 GTP N2 HN21 sing N N 202 GTP N2 HN22 sing N N 203 GTP N3 C4 sing N N 204 HOH O H1 sing N N 205 HOH O H2 sing N N 206 KWU N12 C12 sing N N 207 KWU N12 C11 sing N N 208 KWU N1 C2 doub Y N 209 KWU N1 C9 sing Y N 210 KWU C2 C3 sing Y N 211 KWU C8 C9 doub Y N 212 KWU C8 C7 sing Y N 213 KWU C9 C10 sing Y N 214 KWU C3 N4 doub Y N 215 KWU C11 C7 sing N N 216 KWU C7 C6 doub Y N 217 KWU C10 N4 sing Y N 218 KWU C10 C5 doub Y N 219 KWU C6 C5 sing Y N 220 KWU C5 H5 sing N N 221 KWU C6 H6 sing N N 222 KWU C8 H8 sing N N 223 KWU C12 H122 sing N N 224 KWU C12 H123 sing N N 225 KWU C12 H120 sing N N 226 KWU C11 H111 sing N N 227 KWU C11 H112 sing N N 228 KWU C3 H3 sing N N 229 KWU C2 H2 sing N N 230 KWU N12 H121 sing N N 231 U OP3 P sing N N 232 U OP3 HOP3 sing N N 233 U P OP1 doub N N 234 U P OP2 sing N N 235 U P "O5'" sing N N 236 U OP2 HOP2 sing N N 237 U "O5'" "C5'" sing N N 238 U "C5'" "C4'" sing N N 239 U "C5'" "H5'" sing N N 240 U "C5'" "H5''" sing N N 241 U "C4'" "O4'" sing N N 242 U "C4'" "C3'" sing N N 243 U "C4'" "H4'" sing N N 244 U "O4'" "C1'" sing N N 245 U "C3'" "O3'" sing N N 246 U "C3'" "C2'" sing N N 247 U "C3'" "H3'" sing N N 248 U "O3'" "HO3'" sing N N 249 U "C2'" "O2'" sing N N 250 U "C2'" "C1'" sing N N 251 U "C2'" "H2'" sing N N 252 U "O2'" "HO2'" sing N N 253 U "C1'" N1 sing N N 254 U "C1'" "H1'" sing N N 255 U N1 C2 sing N N 256 U N1 C6 sing N N 257 U C2 O2 doub N N 258 U C2 N3 sing N N 259 U N3 C4 sing N N 260 U N3 H3 sing N N 261 U C4 O4 doub N N 262 U C4 C5 sing N N 263 U C5 C6 doub N N 264 U C5 H5 sing N N 265 U C6 H6 sing N N 266 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 7TZR 'double helix' 7TZR 'a-form double helix' 7TZR 'hairpin loop' 7TZR 'bulge loop' 7TZR 'mismatched base pair' 7TZR 'internal loop' 7TZR 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A GTP 1 1_555 A CCC 80 1_555 -0.345 0.200 -0.573 -14.047 -2.820 2.296 1 X_GTP10:CCC89_X X 10 ? X 89 ? 19 1 1 A G 2 1_555 A U 79 1_555 -2.029 -0.403 -0.530 -8.623 -0.923 3.547 2 X_G11:U88_X X 11 ? X 88 ? 28 1 1 A A 3 1_555 A U 78 1_555 0.003 -0.162 -0.275 -4.249 2.391 4.579 3 X_A12:U87_X X 12 ? X 87 ? 20 1 1 A C 4 1_555 A G 77 1_555 0.170 -0.167 0.123 0.036 1.430 -2.194 4 X_C13:G86_X X 13 ? X 86 ? 19 1 1 A U 5 1_555 A A 76 1_555 -0.031 -0.106 0.055 -1.619 1.158 1.636 5 X_U14:A85_X X 14 ? X 85 ? 20 1 1 A C 6 1_555 A G 42 1_555 0.162 -0.125 0.164 0.918 -2.913 0.625 6 X_C15:G51_X X 15 ? X 51 ? 19 1 1 A G 7 1_555 A C 41 1_555 -0.254 -0.114 -0.289 -3.633 -5.332 2.883 7 X_G16:C50_X X 16 ? X 50 ? 19 1 1 A G 8 1_555 A C 40 1_555 -0.295 -0.118 0.001 -12.611 -8.026 1.408 8 X_G17:C49_X X 17 ? X 49 ? 19 1 1 A G 9 1_555 A C 39 1_555 -0.240 -0.117 -0.031 -13.000 -9.017 -0.378 9 X_G18:C48_X X 18 ? X 48 ? 19 1 1 A G 10 1_555 A A 38 1_555 -0.082 1.605 -0.302 0.956 -5.750 -14.301 10 X_G19:A47_X X 19 ? X 47 ? 8 1 1 A U 11 1_555 A A 36 1_555 -0.022 -0.164 0.057 9.259 7.850 2.323 11 X_U20:A45_X X 20 ? X 45 ? 20 1 1 A U 23 1_555 A U 19 1_555 1.468 -1.571 -0.512 23.823 -19.735 169.345 12 X_U32:U28_X X 32 ? X 28 ? 12 2 1 A G 24 1_555 A C 18 1_555 -0.225 -0.143 -0.350 -9.595 -5.827 1.993 13 X_G33:C27_X X 33 ? X 27 ? 19 1 1 A A 25 1_555 A U 17 1_555 -0.017 -0.102 0.000 -1.931 -3.764 5.877 14 X_A34:U26_X X 34 ? X 26 ? 20 1 1 A A 26 1_555 A U 16 1_555 -0.054 -0.186 0.016 -2.374 0.510 3.018 15 X_A35:U25_X X 35 ? X 25 ? 20 1 1 A G 27 1_555 A C 14 1_555 -0.178 -0.205 -0.558 -9.723 3.467 -2.622 16 X_G36:C23_X X 36 ? X 23 ? 19 1 1 A G 28 1_555 A C 13 1_555 -0.261 -0.120 -0.163 -5.159 -5.879 4.288 17 X_G37:C22_X X 37 ? X 22 ? 19 1 1 A C 29 1_555 A G 12 1_555 0.263 -0.202 0.342 -11.887 5.099 -0.711 18 X_C38:G21_X X 38 ? X 21 ? 19 1 1 A U 30 1_555 A A 34 1_555 4.456 -2.396 0.360 5.725 5.147 -96.073 19 X_U39:A43_X X 39 ? X 43 ? 24 4 1 A G 20 1_555 B C 21 1_555 -0.074 -0.190 -0.675 -6.967 10.784 -2.297 20 X_G29:C30_Y X 29 ? Y 30 ? 19 1 1 A C 21 1_555 B G 20 1_555 0.257 -0.173 -0.320 -1.052 14.894 2.085 21 X_C30:G29_Y X 30 ? Y 29 ? 19 1 1 A A 44 1_555 A A 75 1_555 6.390 -5.517 0.404 -19.929 18.266 167.143 22 X_A53:A84_X X 53 ? X 84 ? 2 8 1 A A 47 1_555 A G 74 1_555 -7.030 -4.842 0.432 13.587 -18.800 -20.271 23 X_A56:G83_X X 56 ? X 83 ? 11 10 1 A C 48 1_555 A G 73 1_555 0.193 -0.049 0.085 2.737 -8.452 2.967 24 X_C57:G82_X X 57 ? X 82 ? 19 1 1 A C 49 1_555 A G 72 1_555 0.195 -0.020 0.317 -6.148 -7.488 2.540 25 X_C58:G81_X X 58 ? X 81 ? 19 1 1 A U 50 1_555 A A 71 1_555 0.000 -0.074 0.213 -5.097 -2.762 2.745 26 X_U59:A80_X X 59 ? X 80 ? 20 1 1 A G 51 1_555 A G 69 1_555 1.645 3.498 0.241 -10.489 2.445 -87.909 27 X_G60:G78_X X 60 ? X 78 ? 6 3 1 A A 52 1_555 A C 68 1_555 -2.535 3.247 0.470 -3.747 -4.105 94.404 28 X_A61:C77_X X 61 ? X 77 ? ? ? 1 A C 54 1_555 A G 67 1_555 0.181 -0.132 0.360 4.442 -7.059 2.296 29 X_C63:G76_X X 63 ? X 76 ? 19 1 1 A U 55 1_555 A A 66 1_555 -0.133 -0.180 0.087 0.069 -4.967 1.961 30 X_U64:A75_X X 64 ? X 75 ? 20 1 1 A G 56 1_555 A C 65 1_555 -0.170 -0.160 -0.078 -2.138 -4.430 1.115 31 X_G65:C74_X X 65 ? X 74 ? 19 1 1 A G 57 1_555 A C 64 1_555 -0.126 -0.141 -0.264 -4.029 -6.708 -0.985 32 X_G66:C73_X X 66 ? X 73 ? 19 1 1 B GTP 1 1_555 B CCC 80 1_555 -0.553 -0.158 -0.204 -10.373 12.873 -1.270 33 Y_GTP10:CCC89_Y Y 10 ? Y 89 ? 19 1 1 B G 2 1_555 B U 79 1_555 -2.306 -0.411 -0.880 -12.758 -14.480 4.184 34 Y_G11:U88_Y Y 11 ? Y 88 ? 28 1 1 B A 3 1_555 B U 78 1_555 0.010 -0.020 -0.499 -11.427 -6.964 1.564 35 Y_A12:U87_Y Y 12 ? Y 87 ? 20 1 1 B C 4 1_555 B G 77 1_555 0.219 -0.108 0.061 -3.106 -2.118 0.307 36 Y_C13:G86_Y Y 13 ? Y 86 ? 19 1 1 B U 5 1_555 B A 76 1_555 0.018 -0.136 0.003 -1.243 2.842 5.576 37 Y_U14:A85_Y Y 14 ? Y 85 ? 20 1 1 B C 6 1_555 B G 42 1_555 0.201 -0.083 0.081 2.718 -4.847 2.388 38 Y_C15:G51_Y Y 15 ? Y 51 ? 19 1 1 B G 7 1_555 B C 41 1_555 -0.216 -0.151 -0.532 -2.121 -7.464 3.549 39 Y_G16:C50_Y Y 16 ? Y 50 ? 19 1 1 B G 8 1_555 B C 40 1_555 -0.305 -0.123 -0.028 -11.852 -8.113 2.027 40 Y_G17:C49_Y Y 17 ? Y 49 ? 19 1 1 B G 9 1_555 B C 39 1_555 -0.181 -0.124 0.231 -8.844 -7.692 -0.903 41 Y_G18:C48_Y Y 18 ? Y 48 ? 19 1 1 B G 10 1_555 B A 38 1_555 0.197 1.557 -0.092 0.526 -2.364 -15.147 42 Y_G19:A47_Y Y 19 ? Y 47 ? 8 1 1 B U 11 1_555 B A 36 1_555 -0.488 -0.141 -0.648 6.009 4.996 15.578 43 Y_U20:A45_Y Y 20 ? Y 45 ? 20 1 1 B U 23 1_555 B U 19 1_555 1.517 -1.236 -0.208 15.626 -38.468 177.530 44 Y_U32:U28_Y Y 32 ? Y 28 ? 12 2 1 B G 24 1_555 B C 18 1_555 -0.247 -0.077 -0.495 -11.916 -1.428 5.958 45 Y_G33:C27_Y Y 33 ? Y 27 ? 19 1 1 B A 25 1_555 B U 17 1_555 -0.792 -0.140 -0.600 -4.486 3.162 6.578 46 Y_A34:U26_Y Y 34 ? Y 26 ? 20 1 1 B A 26 1_555 B U 16 1_555 0.159 -0.135 -0.246 -1.824 8.761 -0.898 47 Y_A35:U25_Y Y 35 ? Y 25 ? 20 1 1 B G 27 1_555 B C 14 1_555 -0.152 -0.106 -0.286 -7.376 2.669 -0.781 48 Y_G36:C23_Y Y 36 ? Y 23 ? 19 1 1 B G 28 1_555 B C 13 1_555 -0.198 -0.138 0.272 -5.338 -2.612 4.234 49 Y_G37:C22_Y Y 37 ? Y 22 ? 19 1 1 B C 29 1_555 B G 12 1_555 0.200 -0.172 0.597 -10.776 8.112 -0.775 50 Y_C38:G21_Y Y 38 ? Y 21 ? 19 1 1 B U 30 1_555 B A 34 1_555 4.126 -2.174 0.606 10.058 13.019 -95.123 51 Y_U39:A43_Y Y 39 ? Y 43 ? 24 4 1 B A 44 1_555 B A 75 1_555 -5.254 5.657 -0.004 7.517 -18.479 -179.864 52 Y_A53:A84_Y Y 53 ? Y 84 ? 2 8 1 B A 47 1_555 B G 74 1_555 -6.734 -4.537 -0.031 3.796 -5.522 -6.838 53 Y_A56:G83_Y Y 56 ? Y 83 ? 11 10 1 B C 48 1_555 B G 73 1_555 0.252 -0.188 0.315 3.258 -4.047 -0.084 54 Y_C57:G82_Y Y 57 ? Y 82 ? 19 1 1 B C 49 1_555 B G 72 1_555 0.154 -0.086 0.255 -1.018 -5.679 0.432 55 Y_C58:G81_Y Y 58 ? Y 81 ? 19 1 1 B U 50 1_555 B A 71 1_555 -0.062 -0.019 0.317 -1.474 -0.553 -8.503 56 Y_U59:A80_Y Y 59 ? Y 80 ? 20 1 1 B G 51 1_555 B G 69 1_555 1.314 3.648 -0.205 -10.504 0.058 -88.546 57 Y_G60:G78_Y Y 60 ? Y 78 ? 6 3 1 B A 52 1_555 B C 68 1_555 -2.583 3.369 0.580 4.695 -3.657 94.549 58 Y_A61:C77_Y Y 61 ? Y 77 ? ? ? 1 B C 54 1_555 B G 67 1_555 0.152 -0.172 0.432 2.199 -9.799 1.217 59 Y_C63:G76_Y Y 63 ? Y 76 ? 19 1 1 B U 55 1_555 B A 66 1_555 0.045 -0.159 0.097 -1.391 -5.176 3.814 60 Y_U64:A75_Y Y 64 ? Y 75 ? 20 1 1 B G 56 1_555 B C 65 1_555 -0.188 -0.176 -0.346 -7.381 -5.902 -0.275 61 Y_G65:C74_Y Y 65 ? Y 74 ? 19 1 1 B G 57 1_555 B C 64 1_555 -0.128 -0.128 -0.281 -3.329 -0.746 -1.839 62 Y_G66:C73_Y Y 66 ? Y 73 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A GTP 1 1_555 A CCC 80 1_555 A G 2 1_555 A U 79 1_555 -0.143 -1.474 3.065 -4.151 9.131 29.190 -4.330 -0.438 2.498 17.480 7.946 30.830 1 XX_GTP10G11:U88CCC89_XX X 10 ? X 89 ? X 11 ? X 88 ? 1 A G 2 1_555 A U 79 1_555 A A 3 1_555 A U 78 1_555 -0.325 -1.092 3.102 -5.554 6.049 38.943 -2.259 -0.123 2.924 8.953 8.220 39.767 2 XX_G11A12:U87U88_XX X 11 ? X 88 ? X 12 ? X 87 ? 1 A A 3 1_555 A U 78 1_555 A C 4 1_555 A G 77 1_555 -0.726 -1.232 3.260 -2.604 8.916 33.416 -3.383 0.835 2.892 15.146 4.424 34.647 3 XX_A12C13:G86U87_XX X 12 ? X 87 ? X 13 ? X 86 ? 1 A C 4 1_555 A G 77 1_555 A U 5 1_555 A A 76 1_555 1.304 -0.991 3.261 7.115 4.873 28.935 -2.916 -1.026 3.275 9.490 -13.856 30.167 4 XX_C13U14:A85G86_XX X 13 ? X 86 ? X 14 ? X 85 ? 1 A U 5 1_555 A A 76 1_555 A C 6 1_555 A G 42 1_555 1.486 -1.498 3.181 -0.960 6.169 34.371 -3.363 -2.611 2.837 10.334 1.609 34.916 5 XX_U14C15:G51A85_XX X 14 ? X 85 ? X 15 ? X 51 ? 1 A C 6 1_555 A G 42 1_555 A G 7 1_555 A C 41 1_555 0.627 -2.534 3.426 1.324 2.126 27.072 -5.936 -0.995 3.247 4.529 -2.820 27.186 6 XX_C15G16:C50G51_XX X 15 ? X 51 ? X 16 ? X 50 ? 1 A G 7 1_555 A C 41 1_555 A G 8 1_555 A C 40 1_555 -0.488 -1.993 3.524 -3.119 1.653 33.621 -3.714 0.300 3.455 2.848 5.373 33.800 7 XX_G16G17:C49C50_XX X 16 ? X 50 ? X 17 ? X 49 ? 1 A G 8 1_555 A C 40 1_555 A G 9 1_555 A C 39 1_555 -0.486 -1.717 3.292 3.054 4.886 30.893 -4.050 1.448 2.932 9.073 -5.671 31.413 8 XX_G17G18:C48C49_XX X 17 ? X 49 ? X 18 ? X 48 ? 1 A G 9 1_555 A C 39 1_555 A G 10 1_555 A A 38 1_555 -1.075 -0.595 2.922 2.699 5.907 34.982 -1.721 2.101 2.701 9.724 -4.442 35.561 9 XX_G18G19:A47C48_XX X 18 ? X 48 ? X 19 ? X 47 ? 1 A G 10 1_555 A A 38 1_555 A U 11 1_555 A A 36 1_555 -0.298 0.239 3.269 -0.020 7.131 7.580 -11.380 1.610 2.547 43.310 0.122 10.404 10 XX_G19U20:A45A47_XX X 19 ? X 47 ? X 20 ? X 45 ? 1 A U 23 1_555 A U 19 1_555 A G 24 1_555 A C 18 1_555 0.321 -0.579 3.162 -1.660 -0.683 121.571 -0.326 -0.198 3.161 -0.391 0.951 121.579 11 XX_U32G33:C27U28_XX X 32 ? X 28 ? X 33 ? X 27 ? 1 A G 24 1_555 A C 18 1_555 A A 25 1_555 A U 17 1_555 0.306 -1.181 3.083 -3.522 1.940 31.379 -2.500 -1.165 2.955 3.569 6.479 31.629 12 XX_G33A34:U26C27_XX X 33 ? X 27 ? X 34 ? X 26 ? 1 A A 25 1_555 A U 17 1_555 A A 26 1_555 A U 16 1_555 0.093 -1.944 3.269 -1.759 5.048 32.405 -4.266 -0.452 2.932 8.969 3.125 32.831 13 XX_A34A35:U25U26_XX X 34 ? X 26 ? X 35 ? X 25 ? 1 A A 26 1_555 A U 16 1_555 A G 27 1_555 A C 14 1_555 2.575 -0.809 3.438 5.600 4.192 54.762 -1.140 -2.423 3.599 4.537 -6.061 55.172 14 XX_A35G36:C23U25_XX X 35 ? X 25 ? X 36 ? X 23 ? 1 A G 27 1_555 A C 14 1_555 A G 28 1_555 A C 13 1_555 0.768 -1.923 3.152 -4.979 10.013 29.196 -5.193 -2.232 2.229 19.006 9.451 31.221 15 XX_G36G37:C22C23_XX X 36 ? X 23 ? X 37 ? X 22 ? 1 A G 28 1_555 A C 13 1_555 A C 29 1_555 A G 12 1_555 -0.361 -1.796 3.476 1.461 11.833 39.020 -3.870 0.678 2.822 17.232 -2.127 40.733 16 XX_G37C38:G21C22_XX X 37 ? X 22 ? X 38 ? X 21 ? 1 A C 29 1_555 A G 12 1_555 A U 30 1_555 A A 34 1_555 -2.731 -0.991 2.890 10.343 3.096 70.448 -0.939 2.640 2.482 2.668 -8.914 71.165 17 XX_C38U39:A43G21_XX X 38 ? X 21 ? X 39 ? X 43 ? 1 A G 20 1_555 B C 21 1_555 A C 21 1_555 B G 20 1_555 0.393 -2.303 3.200 -3.639 3.648 33.733 -4.467 -1.211 2.886 6.241 6.225 34.113 18 XX_G29C30:G29C30_YY X 29 ? Y 30 ? X 30 ? Y 29 ? 1 A A 44 1_555 A A 75 1_555 A A 47 1_555 A G 74 1_555 -2.306 -1.890 0.901 150.937 -80.163 -77.938 1.211 -0.658 1.461 40.872 76.956 -172.931 19 XX_A53A56:G83A84_XX X 53 ? X 84 ? X 56 ? X 83 ? 1 A A 47 1_555 A G 74 1_555 A C 48 1_555 A G 73 1_555 1.693 -1.016 3.772 -4.290 11.962 66.417 -1.430 -1.708 3.464 10.818 3.880 67.485 20 XX_A56C57:G82G83_XX X 56 ? X 83 ? X 57 ? X 82 ? 1 A C 48 1_555 A G 73 1_555 A C 49 1_555 A G 72 1_555 -0.589 -1.864 3.309 -2.980 3.859 32.407 -3.960 0.537 3.112 6.866 5.303 32.762 21 XX_C57C58:G81G82_XX X 57 ? X 82 ? X 58 ? X 81 ? 1 A C 49 1_555 A G 72 1_555 A U 50 1_555 A A 71 1_555 -0.176 -1.020 2.993 0.698 7.304 37.503 -2.376 0.347 2.750 11.228 -1.072 38.189 22 XX_C58U59:A80G81_XX X 58 ? X 81 ? X 59 ? X 80 ? 1 A U 50 1_555 A A 71 1_555 A G 51 1_555 A G 69 1_555 2.548 -1.830 2.814 14.728 9.984 92.141 -1.421 -1.507 2.943 6.881 -10.150 93.462 23 XX_U59G60:G78A80_XX X 59 ? X 80 ? X 60 ? X 78 ? 1 A G 51 1_555 A G 69 1_555 A A 52 1_555 A C 68 1_555 2.929 1.396 0.918 21.498 -170.391 -163.950 -0.630 1.473 1.050 85.236 10.754 -178.848 24 XX_G60A61:C77G78_XX X 60 ? X 78 ? X 61 ? X 77 ? 1 A A 52 1_555 A C 68 1_555 A C 54 1_555 A G 67 1_555 -3.699 -0.280 -1.079 94.220 -137.932 -7.005 0.417 -1.673 1.786 73.988 50.541 -167.065 25 XX_A61C63:G76C77_XX X 61 ? X 77 ? X 63 ? X 76 ? 1 A C 54 1_555 A G 67 1_555 A U 55 1_555 A A 66 1_555 -0.619 -1.815 3.163 -0.502 4.687 33.575 -3.814 0.986 2.899 8.064 0.863 33.895 26 XX_C63U64:A75G76_XX X 63 ? X 76 ? X 64 ? X 75 ? 1 A U 55 1_555 A A 66 1_555 A G 56 1_555 A C 65 1_555 -0.427 -1.566 3.050 0.832 11.434 33.149 -4.073 0.817 2.385 19.334 -1.406 35.023 27 XX_U64G65:C74A75_XX X 64 ? X 75 ? X 65 ? X 74 ? 1 A G 56 1_555 A C 65 1_555 A G 57 1_555 A C 64 1_555 0.400 -1.929 3.204 2.771 7.283 29.701 -4.959 -0.256 2.691 13.909 -5.292 30.684 28 XX_G65G66:C73C74_XX X 65 ? X 74 ? X 66 ? X 73 ? 1 B GTP 1 1_555 B CCC 80 1_555 B G 2 1_555 B U 79 1_555 0.494 -2.177 3.066 3.057 20.253 28.713 -5.861 -0.478 1.332 35.675 -5.385 35.144 29 YY_GTP10G11:U88CCC89_YY Y 10 ? Y 89 ? Y 11 ? Y 88 ? 1 B G 2 1_555 B U 79 1_555 B A 3 1_555 B U 78 1_555 -0.416 -0.698 3.229 -8.631 6.461 41.155 -1.609 -0.289 3.112 9.006 12.031 42.485 30 YY_G11A12:U87U88_YY Y 11 ? Y 88 ? Y 12 ? Y 87 ? 1 B A 3 1_555 B U 78 1_555 B C 4 1_555 B G 77 1_555 -0.344 -1.029 2.950 -3.919 6.561 33.626 -2.634 0.044 2.728 11.162 6.668 34.459 31 YY_A12C13:G86U87_YY Y 12 ? Y 87 ? Y 13 ? Y 86 ? 1 B C 4 1_555 B G 77 1_555 B U 5 1_555 B A 76 1_555 0.984 -0.727 3.258 5.010 3.596 31.234 -1.989 -0.873 3.270 6.598 -9.193 31.823 32 YY_C13U14:A85G86_YY Y 13 ? Y 86 ? Y 14 ? Y 85 ? 1 B U 5 1_555 B A 76 1_555 B C 6 1_555 B G 42 1_555 0.216 -2.332 2.890 0.543 12.753 29.474 -5.926 -0.319 1.758 23.714 -1.010 32.063 33 YY_U14C15:G51A85_YY Y 14 ? Y 85 ? Y 15 ? Y 51 ? 1 B C 6 1_555 B G 42 1_555 B G 7 1_555 B C 41 1_555 0.408 -2.451 3.506 1.257 5.681 23.253 -7.722 -0.580 2.851 13.819 -3.056 23.960 34 YY_C15G16:C50G51_YY Y 15 ? Y 51 ? Y 16 ? Y 50 ? 1 B G 7 1_555 B C 41 1_555 B G 8 1_555 B C 40 1_555 -0.680 -1.952 3.519 -4.452 1.279 30.035 -4.002 0.334 3.497 2.449 8.526 30.382 35 YY_G16G17:C49C50_YY Y 16 ? Y 50 ? Y 17 ? Y 49 ? 1 B G 8 1_555 B C 40 1_555 B G 9 1_555 B C 39 1_555 -0.278 -1.647 3.212 0.240 5.189 31.027 -3.952 0.556 2.903 9.615 -0.445 31.448 36 YY_G17G18:C48C49_YY Y 17 ? Y 49 ? Y 18 ? Y 48 ? 1 B G 9 1_555 B C 39 1_555 B G 10 1_555 B A 38 1_555 -1.166 -0.712 2.957 3.405 5.951 36.232 -1.830 2.247 2.693 9.464 -5.415 36.853 37 YY_G18G19:A47C48_YY Y 18 ? Y 48 ? Y 19 ? Y 47 ? 1 B G 10 1_555 B A 38 1_555 B U 11 1_555 B A 36 1_555 0.187 0.385 3.251 5.840 8.638 3.594 -12.474 8.817 1.461 58.846 -39.786 11.027 38 YY_G19U20:A45A47_YY Y 19 ? Y 47 ? Y 20 ? Y 45 ? 1 B U 23 1_555 B U 19 1_555 B G 24 1_555 B C 18 1_555 0.511 -0.576 2.656 -1.260 1.006 117.704 -0.345 -0.309 2.649 0.588 0.736 117.711 39 YY_U32G33:C27U28_YY Y 32 ? Y 28 ? Y 33 ? Y 27 ? 1 B G 24 1_555 B C 18 1_555 B A 25 1_555 B U 17 1_555 0.590 -1.534 3.181 -0.875 4.545 23.927 -4.954 -1.652 2.821 10.832 2.086 24.364 40 YY_G33A34:U26C27_YY Y 33 ? Y 27 ? Y 34 ? Y 26 ? 1 B A 25 1_555 B U 17 1_555 B A 26 1_555 B U 16 1_555 -0.452 -2.005 3.207 -4.446 6.698 37.993 -3.784 0.172 2.859 10.150 6.737 38.804 41 YY_A34A35:U25U26_YY Y 34 ? Y 26 ? Y 35 ? Y 25 ? 1 B A 26 1_555 B U 16 1_555 B G 27 1_555 B C 14 1_555 2.435 -1.425 3.431 0.810 6.065 48.995 -2.172 -2.854 3.280 7.280 -0.973 49.352 42 YY_A35G36:C23U25_YY Y 35 ? Y 25 ? Y 36 ? Y 23 ? 1 B G 27 1_555 B C 14 1_555 B G 28 1_555 B C 13 1_555 0.705 -2.181 3.060 -5.573 11.367 28.407 -5.808 -2.168 1.899 21.843 10.709 31.047 43 YY_G36G37:C22C23_YY Y 36 ? Y 23 ? Y 37 ? Y 22 ? 1 B G 28 1_555 B C 13 1_555 B C 29 1_555 B G 12 1_555 -0.314 -2.076 3.304 1.325 11.407 39.484 -4.108 0.581 2.619 16.466 -1.913 41.056 44 YY_G37C38:G21C22_YY Y 37 ? Y 22 ? Y 38 ? Y 21 ? 1 B C 29 1_555 B G 12 1_555 B U 30 1_555 B A 34 1_555 -2.885 -0.995 2.779 12.430 3.189 67.014 -0.982 2.940 2.234 2.862 -11.153 68.091 45 YY_C38U39:A43G21_YY Y 38 ? Y 21 ? Y 39 ? Y 43 ? 1 B A 44 1_555 B A 75 1_555 B A 47 1_555 B G 74 1_555 2.210 -2.266 0.694 89.681 137.833 105.273 -1.254 -1.032 0.135 70.243 -45.703 170.576 46 YY_A53A56:G83A84_YY Y 53 ? Y 84 ? Y 56 ? Y 83 ? 1 B A 47 1_555 B G 74 1_555 B C 48 1_555 B G 73 1_555 0.924 -0.763 3.462 -4.190 2.555 66.367 -0.801 -1.016 3.377 2.331 3.822 66.528 47 YY_A56C57:G82G83_YY Y 56 ? Y 83 ? Y 57 ? Y 82 ? 1 B C 48 1_555 B G 73 1_555 B C 49 1_555 B G 72 1_555 -0.932 -2.166 3.096 -2.359 5.565 27.379 -5.647 1.427 2.681 11.579 4.909 28.026 48 YY_C57C58:G81G82_YY Y 57 ? Y 82 ? Y 58 ? Y 81 ? 1 B C 49 1_555 B G 72 1_555 B U 50 1_555 B A 71 1_555 -0.229 -1.457 3.130 -1.014 4.268 41.478 -2.467 0.222 2.977 6.006 1.427 41.699 49 YY_C58U59:A80G81_YY Y 58 ? Y 81 ? Y 59 ? Y 80 ? 1 B U 50 1_555 B A 71 1_555 B G 51 1_555 B G 69 1_555 2.619 -2.276 2.959 19.330 6.679 88.228 -1.738 -1.475 3.223 4.745 -13.732 90.090 50 YY_U59G60:G78A80_YY Y 59 ? Y 80 ? Y 60 ? Y 78 ? 1 B G 51 1_555 B G 69 1_555 B A 52 1_555 B C 68 1_555 2.867 1.650 0.691 21.831 -173.171 -144.564 -0.691 1.451 1.047 86.714 10.932 -178.339 51 YY_G60A61:C77G78_YY Y 60 ? Y 78 ? Y 61 ? Y 77 ? 1 B A 52 1_555 B C 68 1_555 B C 54 1_555 B G 67 1_555 -3.618 -0.582 -0.856 92.727 -135.254 -10.392 0.531 -1.664 1.481 73.628 50.478 -164.054 52 YY_A61C63:G76C77_YY Y 61 ? Y 77 ? Y 63 ? Y 76 ? 1 B C 54 1_555 B G 67 1_555 B U 55 1_555 B A 66 1_555 -0.567 -1.760 3.123 -1.697 5.489 33.626 -3.800 0.720 2.833 9.403 2.906 34.099 53 YY_C63U64:A75G76_YY Y 63 ? Y 76 ? Y 64 ? Y 75 ? 1 B U 55 1_555 B A 66 1_555 B G 56 1_555 B C 65 1_555 -0.368 -1.469 3.127 3.027 14.712 33.436 -4.093 0.947 2.263 24.117 -4.962 36.567 54 YY_U64G65:C74A75_YY Y 64 ? Y 75 ? Y 65 ? Y 74 ? 1 B G 56 1_555 B C 65 1_555 B G 57 1_555 B C 64 1_555 0.305 -2.151 3.131 -1.920 4.079 31.537 -4.599 -0.876 2.814 7.457 3.511 31.850 55 YY_G65G66:C73C74_YY Y 65 ? Y 74 ? Y 66 ? Y 73 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number R01GM112940 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id KWU _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id KWU _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'N-methyl-1-(quinoxalin-6-yl)methanamine' KWU 3 'MAGNESIUM ION' MG 4 'POTASSIUM ION' K 5 'SODIUM ION' NA 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2GDI _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _space_group.name_H-M_alt 'C 1 2 1' _space_group.name_Hall 'C 2y' _space_group.IT_number 5 _space_group.crystal_system monoclinic _space_group.id 1 #